cluster # 10484

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Schistosoma mansoni
cluster # 10484 cluster # 10484 Sequences # 17 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10484#0 length = 1260 sequences # 15

consensus_10484#1 length = 347 sequences # 1
consensus_10484#2 length = 240 sequences # 1

consensusID : consensus_10484#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1260
fasta sequence

                              [CCTCGAGGCCAAGATTCGGCACGAGGGTTCTTGCAGGAATGAAGAAATTTTTGGATAATACTAATACAAAGCTTAATAGGGCTCTGCAGAAAACAAATGAAGTCATAGGAAGAGCTGAAAAGACAGAATTCGATGAGGAATTTGTCTCACTATTAAGGCAAGCAGAATCCACACATGAAGCTTCTAAGCAGATTATGGAGGCTATTGAGCAGTGGATCAATCCGTGTGTCTTAAAAAAGTTCGATGATGTCGCTTGCAAAGTAGAAAGTATGGTCACAGATAACAAAAGTTATTGGCTGAAGGTTCCTGCAAAGTTACCCGCCGAACATCTTGGAGATACACTACTCAGTATAGCTGTTGGTGTCGGAGCTGGTACTGCATATGGCGCGGCATTATCACAATGCGGTGAATACAGTCGTGAGATAGCTTCAGCTGAAAGTCGAAGGAATGCAATACTAGAAAAGAAAACATTATGTGTACTACATCACTTTTTGGCAATTGAATGGCCTGAAATACAAAAAGAACTTGGTCATTTGGAGTCGTATCGTTTGGACTATGATAAATTTAGAAGTAAAGTGAAGCATAACGAATAT-CCAGATCCTGAGACTTTGAAGAAAATGGAAGATGCTAAAACCGTTCTCTATAAAC-AACTAGATAAAACTAGATCTAGACTACAACAGGTCAAGTCGGTAAATGACTCTAACATGATGGCATTAAAAGAATTAGTCGCAGCTCAACGAACTTATTTCACTGAATGCAAACAGAGGACTGA-AGAATTGTC--TGCTCAAATGGAAAGATTAAAGTAAACATATGCTTTTCGGGGGAG-AAAAAAAAGAGGCTAAATTGAAATAAAAAC-AAAAAAAATCCAATTTTGTGTCTTTCCAGTAATAACTAATATATACATATATGGAACTTTA-TTTTGTGCAACAGTCACGCTATACAACTACTCTGTTGAAACTCTTTTTTGGTCCCAAATTCTTCGCGTTCCCCATCGATTTAAACTGCTCGTCTTTTTTTTGTTATCTCCACACACC-TTTACTGTTCAGTGTATATTTATATTAATATCGATATTATTTGCCTTATACATTTCAATAATGTCATTCATTACATTATTGAATTAAA-TAAGAAATTTAC-TTATTTCTTTTCAATGCTTTCATGATTATTCTGCGATTTATGTTTGT----GTGT-GTGTCTCTTCT--GGTTAAGGTGTATTTACATATTTTAGTGTTTTTTGTGGGGGGTGGTTGGTTTTTGTTTGATGAA]

[+] EMBL CD082525             [CCTCGAGGCCAAGATTCGGCACGAGGGTTCTTGCAGGAATGAAGAAATTTTTGGATAATACTAATACAAAGCTTAATAGGGCTCTGCAGAAAACAAATGAAGTCATAGGAAGAGCTGAAAAGACAGAATTCGATGAGGAATTTGTCTCACTATTAAGGCAAGCAGAATCCACACATGAAGCTTCTAAGCAGATTATGGAGGCTATTGAGCAGTGGATCAATCCGTGTGTCTTAAAAAAGTTCGATGATGTCGCTTGCAAAGTAGAAAGTATGGTCACAGATAACAAAAGTTATTGGCTGAAGGTTCCTGCAAAGTTACCCGCCGAACATCTTGG GATACACTACTCAGTATAGCTGTTGGTGTCGGAGCTGGTACTGCATATGGCGCGGCATTATCACAATGCGGTGAATACAGTCGTGAGATAGCTTCAGCTGAAAGTCGAAGGAATGCAATACTAGAAAAGAAAACATTATGTGTACTACATCACTTTTTGGCAATTGAATGGCCTGAAATACAAAAAGAACTTGGTCATTTGGAGTCGTATCGTTTGGACTATGATAAATTTAGAAGTANAGTGAAGCATAACGAATAT CCAGATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD081400             [                   ctCGAGGGTTCTTGCAGGAATGAAGAAATTTTTGGATAATATTAATACAAAGCTTAATACGGCTCTGCAGAAAACAAATGAAGTCATAGGAAGAGCTGAAAAGACAGAATTCGATGAGGAATTTGTCTCACTATTAAGGCAAGCAGAATCCACACATGAAGCTTCTAAGCAGATTATGGAGGCTATTGAGCAGTGGATCAATCCGTGTGTCTTAAAAAAGTTCGATGATGTCGCTTGCAAAGTAGAAAGTATGGTCACAGATAACAAAAGTTATTGGCTGAAGGTTCCTGCAAAGTTACCCGCCGAACATCTTGGAGATACACTACTCAGTATAGCTGTTGGTGTCGGAGCTGGTACTGCATATGGCGCGGCATTATCACAATGCGGTGAATACAGTCGTGAGATAGCTTCAGCTGAAAGTCGAAGGAATGCAATACTAGAAAAGAAAACATTATGTGTACTACATCACTTTTTGGCAATTGAATGGCCTGAAATACAAAAAGAACTTGGTCATTTGGAGTCGTATCGTTTGGACTATGATAAATTTAGAAGTAAAGTGAAGCATAACGAATAT CCAGATCCTGAGACTNTGAAGAAAATGGAAGATGCTAAAACCGTTCTCTATAAACAAACTAGATAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AI067533             [                                           GAAATTTTTGGATAATACTAATACAAAGCTTAATAGGGCTCTGCAGAAAACAAATGAAGTCATAGGAAGAGCTGAAAAGACAGAATTCGATGAGGAATTTGTCTCACTATTAAGGCAAGCAGAATCCACACATGAAGCTTCTAAGCAGATTATGGAGGCTATTGAGCAGTGGATCAATCCGTGTGTCTTAAAAAAGTTCGATGATGTCGCTTGCAAAGTAGAAAGTATGGTCACAGATAACAAAAGTTATTGGCTGAAGGTTCCTGCAAAGTTACCCGCCGAACATCTTGGAGATACACTACTCACTATAGCTGTTGGTGTCGGAGCTGGTACTGCATATGGCGCGGCATTATCACAATGCGGTGAATACAGTCGTGAGATAGCTTCAGCTGAAAGTCGAAGGAATGCAATACTAGAAAAGAAAACATTATGTGTACTACATCACTTTTTGGCAATTGAATGGCCTGAAATACAAAAAGAACTTGGTCATTTGGAGTCCTATCGTTTGGACTATGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AI067687             [                                                         ATACTAATACAAAGCTTAATAGGGCTCTGCAGAAAACAAATGAAGTCATAGGAAGAGCTGAAAAGACAGAATTCGATGAGGAATTTGTCTCACTATTAAGGCAAGCAGAATCCACACATGAAGCTTCTAAGCAGATTATGGAGGCTATTGAGCAGTGGATCAATCCGTGTGTCTTAAAAAAGTTCGATGATGTCGCTTGCAAAGTAGAAAGTATGGTCACAGATAACAAAAGTTATTGGCTGAAGGTTCCTGCAAAGTTACCCGCCGAACATCTTGGAGATACACTACTCAGTATAGCTGTTGGTGTCGGAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AI067040             [                                                         ATACTAATACAAAGCTTAATAGGGCTCTGCAGAAAACAAATGAAGTCATAGGAAGAGCTGAAAAGACAGAATTCGATGAGGAATTTGTCTCACTATTAAGGCAAGCAGAATCCACACATGAAGCTTCTAAGCAGATTATGGAGGCTATTGAGCAGTGGATCAATCCGTGTGTCTTAAAAAAGTTCGATGATGTCGCTTGCAAAGTAGAAAGTATGGTCACAGATAACAAAAGTTATTGGCTGAAGGTTCCTGCAAAGTTACCCGCCGAACATCTTGGAGATACACTACTCAGTATAGCTGTGGGTGTCNGAGCTGGTACTGCATATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AI067676             [                                                         ATACTAATACAAAGCTTAATAGGGCTCTGCAGAAAACAAATGAAGTCATAGGAAGAGCTGAAAAGACAGAATTCGATGAGGAATTTGTCTCACTATTAAGGCAAGCAGAATCCACACATGAAGCTTCTAAGCAGATTATGGAGGCTATTGAGCAGTGGATCAATCCGTGTGTCTTAAAAAAGTTCGATGATGTCGCTTGCAAAGTAGAAAGTATGGTCACAGATAACAAAAGTTATTGGCTGAAGGTTCCTGCAAAGTTACCCGCCGAACATCTTGGAGATACACTACTCAGTATAGCTGTTGGTGTCGGAGCTGGTACTGCATATGGCGCGGCATTATCACAATGCGGTGAATACAGTCGTGAGATAGCTTCAGCTGAAAGTCGAAGGAATGCAATACTAGAAAAGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AI067796             [                                                                               GGCTCTGCAGAAAACAAATGAAGTCATAGGAAGAGCTGAAAAGACAGAATTCGATGAGGAATTTGTCTCACTATTAAGGCAAGCAGAATCCACACATGAAGCTTCTAAGCAGATTATGGAGGCTATTGAGCAGTGGATCAATCCGTGTGTCTTAAAAAAGTTCGATGATGTCGCTTGCAAAGTAGAAAGTATGGTCACAGATAACAAAAGTTATTGGCTGAAGGTTCCTGCAAAGTTACCCGCCGAACATCTTGGAGATACACTACTCAGTATAGCTGTTGGTGTCGGAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD060195             [                                                                                                                                                                                                                                                                                                                                                                                                                          TACATTCGTGAGATAGCTTCAGCTGAAAGTCGAAGGAATGCAATACTAGAAAAGAAAACATTATGTGTACTACATCACTTTTTGGCAATTGAATGGCCTGAAATACAAAAAGAACTTGGTCATTTGGAGTCGTATCGTTTGGACTATGATAAATTTAGAAGTAAAGTGAAGCATAACGAATGT CCAGATCCTGAGACTTTGAAGAAAATGGAAGATGCTAAAACCGTTCTCTATAAAC AACTAGATAAAACTAGATCTAGACTACAACAGGTCAAGTCGGTAAATGACTCTAACATGATGGCATTAAAAGAATTAGTCGCAGCTCAACGAACTTATTTCACTGAATGCAAACAGAGGACTGA AGAATTGTC  TGCTCAAATGGAAAGATTAAAGTAAACATATGCTTTTCGGGGGAGAAAAAAAAAGAGGCTAAATTGAAATAAAAAC AAAAAAAATCCAATTTTGTGTCTTTCCAGTAATAACTAATATATACATATATGGCACTTTACTTTTGTGCAACAGTCA                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD060145             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATCGTTTGGACTATGATAAATTTAGAAGTAAAGTGAAGCATAACGTATATGCCAGATCCTGAGACTTTGAAGAAAATGGAAGATGCTAAAACCGTTCTCTATAAAC AACTAGATAAAACTAGATCTAGACTACAACAGATCAAGTCGGTAAATGACTCTTACATGATGGCATTAAAAGAATTAGTCGCAGCTCAACGAACTTATTTCACTGAATGCACACAGAGGACTGACAG ATAGTCCATGATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD075231             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GATGCTAAAACCGTTCTCTATAAAC AACTAGATAAAACTAGATCTAGACTACAACAGGTCAAGTCGGTAAATGACTCTAACATGATGGCATTAAAAGAATTAGTCGCAGCTCAACGAACTTATTTCACTGAATGCAAACAGAGGACTGA AGAATTGTC  TGCTCAAATGGAAAGATTAAAGTAAACATATGCTTTTCGGGGGAG AAAAAAAAGAGGCTAAATTGAAATAAAAAC AAAAAAAATCCAATTTTGTGTCTTTCCAGTAATAACTAATATATACATATATGGAACTTTA TTTTGTGCAACAGTCACGCTATACAACTACTCTGTTGAAACTCTTTTTTGGTCCCAAATTCTTCGCGTTCCCCATCGATTTAAACTGCTCGTCTTTTTTTTGTTATCTCCACACACC TTTACTGTTCAGTGTATATTTATATTAATATCGATATTATTTGCCTTATACATTTCAATAATGTCATTCATTACATTATTGAATTAAA TAAAAAATTTAC TTA                                                                                                                                  ]
[+] EMBL AI111065             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTAAATGACTCTAACATGATGGCATTAAAAGAATTAGTCGCAGCTCAACGAACTTATTTCACTGAATGCAAACAGAGGACTGA AGAATTGTC  TGCTCAAATGGAAAGATTAAAGTAAACATNTGCTTTTCGGGGGAG AAAAAAAAGAGGCTAAATTGAAATAAAAAC AAAAAAAATCCAATTTTGTGTCTTTCCAGTAATAACTAATATATACATNTATGGAACTTTA TTTTGTGCAACAGTCACGCTATACAACTACTCTGTTGAAACTCTTTTTTGGTCCCAAATTCTTCGCGTTCCCCATCGATTTAAACTGCTCGTCTTTTTTTTGTTATCTCCACACACCTTTTACTGTTCAGTGTTTATTTATATTAATATCG                                                                                                                                                                                                          ]
[+] EMBL AI111129             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTAGTCGCAGCNCAACGAACTTATTTCNCTGAATGCNAACAGAGGACTGA ANAATTGTC  TGCTCAAATGGAAAGATTANAGTTAACNTNTGCCTTNCGGGGGAG AAAAAAANGANGCTAAATTGAAATNAAAAC AAAAAAAATCCAATTTTGTGTCTTTCCAGTANTANCTAATATATACATATATGGAACTTTA TTTTGTGCAACAGTCACGCTATACAACTACTCTGTTNAAACTCTTNNTTGGTCCCAAATTCTTCGCGTTCCCCATCGATTTAAACTGCTCGTCTTTTTTTTGTTATCTCCACACACC TTTACTGTTCAGTGTNTATTTATATTAATATCGATATTATTTGCCTTATNCATTTCNATAATGTCNTTCATTACATTATTGANTTAAA TAAAAAATTTAC                                                                                                                                      ]
[+] EMBL AI390096             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGCTAAATTGAAATAAAAACAAAAAAAAATCCAATTTTGTGTCTTTCCAGTAATAACTAATATATACATATATGGAACTTTA TTTTGTGCAACAGTCACGCTATACAACTACTCTGTTGAAACTCTTTTTTGGTCCCAAATTCTTCGCGTTCCCCATCGATTTAAACTGCTCGTCTTTTTTTTGTTATCTCCACACACC TTTACTGTTCAGTGTATATTTATATTAATATCGATATTATTTGCCTTATACATTTCAATAATGTCATTCATTACATTATTGAATT AA TAAG                                                                                                                                              ]
[+] EMBL AI559052             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCTAAATTGAAATAAAAACAAAAAAAAATCCAATTTTGTGTCGTTCCAGTAATAACTAATATATACATATATGGAACTTTA TTTTGTGCAACAGTCACGCTATACAACTACTCTGTTGAAACTCTTTTTTGGTCCCAAATTCTTCGCGTTCCCCATCGATTTAAACTGCTCGTCTTTTTTTTGTAATCTCCACACACC TTTACTGTTCAGTGTATATTTATATTAATATCGATATTATTTGCCTTATACATTTCAATAATGTCATTCATTACATTATTGAATTAAATTAAGAATTTTACTTTATTTCTTTTCAATGCTTTCATGATTATTCTGCGATTTATGTTTGTGCAGGTGTGGTGTCTCTTCTCGGGTTAAGGTGTATTTACATATTTTAGTGTTTTTTGTGGGGGGTGGTTGGTTTTTGTTTGATGAA]
[+] EMBL SM914                [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTGAAACTCTTTTTTGGTCCCAAATTCTTCGCGTTCCCCATCGATTTAAACTGCTCGTCTTTTTTTTGTTATCTCCACACACC TTTACTGTTCAGTGTATATTTATATTAATATCGATATTATTTGCCTTATACATTTCAATAATGTCATTCATTACATTATTGAATTAAA TAAGAAATTTAC TTATTTCTTTTCAATGCTTTCATGATTATTCTTCGATTTATGTTTGT    GTGT GTTTCTTTTCT  GGTTTATGTGTAT                                                   ]




>consensus_10484#0
CCTCGAGGCCAAGATTCGGCACGAGGGTTCTTGCAGGAATGAAGAAATTTTTGGATAATA
CTAATACAAAGCTTAATAGGGCTCTGCAGAAAACAAATGAAGTCATAGGAAGAGCTGAAA
AGACAGAATTCGATGAGGAATTTGTCTCACTATTAAGGCAAGCAGAATCCACACATGAAG
CTTCTAAGCAGATTATGGAGGCTATTGAGCAGTGGATCAATCCGTGTGTCTTAAAAAAGT
TCGATGATGTCGCTTGCAAAGTAGAAAGTATGGTCACAGATAACAAAAGTTATTGGCTGA
AGGTTCCTGCAAAGTTACCCGCCGAACATCTTGGAGATACACTACTCAGTATAGCTGTTG
GTGTCGGAGCTGGTACTGCATATGGCGCGGCATTATCACAATGCGGTGAATACAGTCGTG
AGATAGCTTCAGCTGAAAGTCGAAGGAATGCAATACTAGAAAAGAAAACATTATGTGTAC
TACATCACTTTTTGGCAATTGAATGGCCTGAAATACAAAAAGAACTTGGTCATTTGGAGT
CGTATCGTTTGGACTATGATAAATTTAGAAGTAAAGTGAAGCATAACGAATATCCAGATC
CTGAGACTTTGAAGAAAATGGAAGATGCTAAAACCGTTCTCTATAAACAACTAGATAAAA
CTAGATCTAGACTACAACAGGTCAAGTCGGTAAATGACTCTAACATGATGGCATTAAAAG
AATTAGTCGCAGCTCAACGAACTTATTTCACTGAATGCAAACAGAGGACTGAAGAATTGT
CTGCTCAAATGGAAAGATTAAAGTAAACATATGCTTTTCGGGGGAGAAAAAAAAGAGGCT
AAATTGAAATAAAAACAAAAAAAATCCAATTTTGTGTCTTTCCAGTAATAACTAATATAT
ACATATATGGAACTTTATTTTGTGCAACAGTCACGCTATACAACTACTCTGTTGAAACTC
TTTTTTGGTCCCAAATTCTTCGCGTTCCCCATCGATTTAAACTGCTCGTCTTTTTTTTGT
TATCTCCACACACCTTTACTGTTCAGTGTATATTTATATTAATATCGATATTATTTGCCT
TATACATTTCAATAATGTCATTCATTACATTATTGAATTAAATAAGAAATTTACTTATTT
CTTTTCAATGCTTTCATGATTATTCTGCGATTTATGTTTGTGTGTGTGTCTCTTCTGGTT
AAGGTGTATTTACATATTTTAGTGTTTTTTGTGGGGGGTGGTTGGTTTTTGTTTGATGAA

consensusID : consensus_10484#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 347
fasta sequence

                              [CCCTCATAGGCTCGAGGAATGAAGAAATTTTTGGATAATACTAATACAAAGCTTAATAGGGCTCTGCAGAAAACAAATGAAGGCATGGGAAGAGCTGAAAAGACAGAATTCGATGAGGAATTTGTCTCACTATTAAGGCAAGCAGAATCCACACATGAAGCTTCTAAGCAGATTATGGAGGCTATTGAGCAGTGGATCAATCCGTGTGTCTGTAAATTGTGTTTTATCTACAACTCATGATTCTTTATCCTTAGTAAAAAAGTTCGATGATGTCGCTTGCAAAGTAGAAAGTATGGTCACAGATAACAAAAGTTATTGGCTGAAGGTTCCTGCGAACCTATGAGGGT]

[+] EMBL CD060787             [CCCTCATAGGCTCGAGGAATGAAGAAATTTTTGGATAATACTAATACAAAGCTTAATAGGGCTCTGCAGAAAACAAATGAAGGCATGGGAAGAGCTGAAAAGACAGAATTCGATGAGGAATTTGTCTCACTATTAAGGCAAGCAGAATCCACACATGAAGCTTCTAAGCAGATTATGGAGGCTATTGAGCAGTGGATCAATCCGTGTGTCTGTAAATTGTGTTTTATCTACAACTCATGATTCTTTATCCTTAGTAAAAAAGTTCGATGATGTCGCTTGCAAAGTAGAAAGTATGGTCACAGATAACAAAAGTTATTGGCTGAAGGTTCCTGCGAACCTATGAGGGT]




>consensus_10484#1
CCCTCATAGGCTCGAGGAATGAAGAAATTTTTGGATAATACTAATACAAAGCTTAATAGG
GCTCTGCAGAAAACAAATGAAGGCATGGGAAGAGCTGAAAAGACAGAATTCGATGAGGAA
TTTGTCTCACTATTAAGGCAAGCAGAATCCACACATGAAGCTTCTAAGCAGATTATGGAG
GCTATTGAGCAGTGGATCAATCCGTGTGTCTGTAAATTGTGTTTTATCTACAACTCATGA
TTCTTTATCCTTAGTAAAAAAGTTCGATGATGTCGCTTGCAAAGTAGAAAGTATGGTCAC
AGATAACAAAAGTTATTGGCTGAAGGTTCCTGCGAACCTATGAGGGT

consensusID : consensus_10484#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 240
fasta sequence

                              [TCCAGTGTATATTTATATTAATATCGATATTATTTGCCTTATACATTTCAATAATGTCATTCATTACATTATTGAATTAAATAAGAAATTTACTTATTTCTTTTCAATGCTTTCATGATTATTCTTCGATTTATGTTTGTGTACGTGTGTGTGTTTCTTTTCTGGTTTATGTGTATTTTTCATATTTTTATTGTNTTTTTTGGTGGGTGGGTTGGTGTTGGTTGATTGAAAAATTATCTA]

[-] EMBL AA999290             [TCCAGTGTATATTTATATTAATATCGATATTATTTGCCTTATACATTTCAATAATGTCATTCATTACATTATTGAATTAAATAAGAAATTTACTTATTTCTTTTCAATGCTTTCATGATTATTCTTCGATTTATGTTTGTGTACGTGTGTGTGTTTCTTTTCTGGTTTATGTGTATTTTTCATATTTTTATTGTNTTTTTTGGTGGGTGGGTTGGTGTTGGTTGATTGAAAAATTATCTA]




>consensus_10484#2
TCCAGTGTATATTTATATTAATATCGATATTATTTGCCTTATACATTTCAATAATGTCAT
TCATTACATTATTGAATTAAATAAGAAATTTACTTATTTCTTTTCAATGCTTTCATGATT
ATTCTTCGATTTATGTTTGTGTACGTGTGTGTGTTTCTTTTCTGGTTTATGTGTATTTTT
CATATTTTTATTGTNTTTTTTGGTGGGTGGGTTGGTGTTGGTTGATTGAAAAATTATCTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10484#0      CCTCGAGGCCAAGATTCGGCACGAGGGTTCTTGCAGGAATGAAGAAATTTTTGGATAATA 60
consensus_10484#2      ------------------------------------------------------------
consensus_10484#1      ------------------------------------------------------------
                                                                                   

consensus_10484#0      CTAATACAAAGCTTAATAGGGCTCTGCAGAAAACAAATGAAGTCATAGGAAGAGCTGAAA 120
consensus_10484#2      ------------------------------------------------------------
consensus_10484#1      ------------------------------------------------------------
                                                                                   

consensus_10484#0      AGACAGAATTCGATGAGGAATTTGTCTCACTATTAAGGCAAGCAGAATCCACACATGAAG 180
consensus_10484#2      ------------------------------------------------------------
consensus_10484#1      ------------------------------------------------------------
                                                                                   

consensus_10484#0      CTTCTAAGCAGATTATGGAGGCTATTGAGCAGTGGATCAATCCGTGTGTCTTAAAAAAGT 240
consensus_10484#2      ------------------------------------------------------------
consensus_10484#1      ------------------------------------------------------------
                                                                                   

consensus_10484#0      TCGATGATGTCGCTTGCAAAGTAGAAAGTATGGTCACAGATAACAAAAGTTATTGGCTGA 300
consensus_10484#2      ------------------------------------------------------------
consensus_10484#1      ------------------------------------------------------------
                                                                                   

consensus_10484#0      AGGTTCCTGCAAAGTTACCCGCCGAACATCTTGGAGATACACTACTCAGTATAGCTGTTG 360
consensus_10484#2      ------------------------------------------------------------
consensus_10484#1      ------------------------------------------------------------
                                                                                   

consensus_10484#0      GTGTCGGAGCTGGTACTGCATATGGCGCGGCATTATCACAATGCGGTGAATACAGTCGTG 420
consensus_10484#2      ------------------------------------------------------------
consensus_10484#1      ------------------------------------------------------------
                                                                                   

consensus_10484#0      AGATAGCTTCAGCTGAAAGTCGAAGGAATGCAATACTAGAAAAGAAAACATTATGTGTAC 480
consensus_10484#2      ------------------------------------------------------------
consensus_10484#1      ------------------------------------------------------------
                                                                                   

consensus_10484#0      TACATCACTTTTTGGCAATTGAATGGCCTGAAATACAAAAAGAACTTGGTCATTTGGAGT 540
consensus_10484#2      ------------------------------------------------------------
consensus_10484#1      ------------------------------------------------------------
                                                                                   

consensus_10484#0      CGTATCGTTTGGACTATGATAAATTTAGAAGTAAAGTGAAGCATAACGAATATCCAGATC 600
consensus_10484#2      ------------------------------------------------------------
consensus_10484#1      ------------------------------------------------------------
                                                                                   

consensus_10484#0      CTGAGACTTTGAAGAAAATGGAAGATGCTAAAACCGTTCTCTATAAACAACTAGATAAAA 660
consensus_10484#2      ------------------------------------------------------------
consensus_10484#1      ------------------------------------------------------------
                                                                                   

consensus_10484#0      CTAGATCTAGACTACAACAGGTCAAGTCGGTAAATGACTCTAACATGATGGCATTAAAAG 720
consensus_10484#2      ------------------------------------------------------------
consensus_10484#1      ------------------------------------------------------------
                                                                                   

consensus_10484#0      AATTAGTCGCAGCTCAACGAACTTATTTCACTGAATGCAAACAGAGGACTGAAGAATTGT 780
consensus_10484#2      ------------------------------------------------------------
consensus_10484#1      ------------------------------------------------------------
                                                                                   

consensus_10484#0      CTGCTCAAATGGAAAGATTAAAGTAAACATATGCTTTTCGGGGGAGAAAAAAAAGAGGCT 840
consensus_10484#2      ------------------------------------------------------------
consensus_10484#1      ------------------------------------------------------------
                                                                                   

consensus_10484#0      AAATTGAAATAAAAACAAAAAAAATCCAATTTTGTGTCTTTCCAGTAATAACTAATATAT 900
consensus_10484#2      ------------------------------------------------------------
consensus_10484#1      ------------------------------------------------------------
                                                                                   

consensus_10484#0      ACATATATGGAACTTTATTTTGTGCAACAGTCACGCTATACAACTACTCTGTTGAAACTC 960
consensus_10484#2      ------------------------------------------------------------
consensus_10484#1      ------------------------------------------------------------
                                                                                   

consensus_10484#0      TTTTTTGGTCCCAAATTCTTCGCGTTCCCCATCGATTTAAACTGCTCGTCTTTTTTTTGT 1020
consensus_10484#2      ------------------------------------------------------------
consensus_10484#1      -------------------CCCTCATAGGCTCGAGGAATGAAGAAATTTTTGGATAATAC 41
                                                                                   

consensus_10484#0      TATCTCCACACACCTTTACTGTTCAGTGTATATTTATATTAATATCGATATTATTTGCCT 1080
consensus_10484#2      ---------------------TCCAGTGTATATTTATATTAATATCGATATTATTTGCCT 39
consensus_10484#1      TAATACAAAGCTTAATAGGGCTCTGCAGAAAACAAATGAAGGCATGGGAAGAGCTGAAAA 101
                                            *     * * *   **      ** *  *    *     

consensus_10484#0      TATACATTTCAATAATGTCATTCATTACATTATTGAATTAAATAAGAAATTTACTTATTT 1140
consensus_10484#2      TATACATTTCAATAATGTCATTCATTACATTATTGAATTAAATAAGAAATTTACTTATTT 99
consensus_10484#1      GACAGAATTCGATGAGGA-ATTTGTCTCACTATTAAGGCAAGCAGAATCCACACATGAAG 160
                        * * * *** ** * *  ***  *  ** **** *   **  *  *     ** *    

consensus_10484#0      CTTTTCAATG--CTTTCATGATTATTCTGCGATTTAT--GTTTGTGTGTGTGT------- 1189
consensus_10484#2      CTTTTCAATG--CTTTCATGATTATTCTTCGATTTAT--GTTTGTGTACGTGTG---TGT 152
consensus_10484#1      CTTCTAAGCAGATTATGGAGGCTATTGAGCAGTGGATCAATCCGTGTGTCTGTAAATTGT 220
                       *** * *      * *   *  ****   *  *  **   *  ****   ***       

consensus_10484#0      ----CTCTTCTGGTTAAGGTGTATTTA-CAT---------ATTTT-AGTGTTTTTTGTGG 1234
consensus_10484#2      GTTTCTTTTCTGGTTTATGTGTATTTTTCAT---------ATTTTTATTGTNTTTTTTGG 203
consensus_10484#1      GTTTTATCTACAACTCATGATTCTTTATCCTTAGTAAAAAAGTTCGATGATGTCGCTTGC 280
                               *     * * *  * ***  * *         * **  *   * *    ** 

consensus_10484#0      GGGGTGG-TTG-GTTTTTGTTTGATG-AA------------------------------- 1260
consensus_10484#2      TGGGTGGGTTG-GTGTTGGTTGATTG-AAAAATTATCTA--------------------- 240
consensus_10484#1      AAAGTAGAAAGTATGGTCACAGATAACAAAAGTTATTGGCTGAAGGTTCCTGCGAACCTA 340
                          ** *   *  *  *          **                               

consensus_10484#0      -------
consensus_10484#2      -------
consensus_10484#1      TGAGGGT 347