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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10486#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 988 fasta sequence
[TACGCAGTACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAGTAATAATTTCAGATCACAATGTATTGTTTCATGGAAAAATCTGTTCATTCAACAAATTATGCATTAAAAAATTTAGAAGCCAACTTTTCCAAGTCTTTCGTCAGTTTTTGGATCTGCTGTCAATTTTTG-AACATGTACTAT-GCTAGCATTTGCTTGGTTTTGTAATTTTCGTAGCCGATCTATATTTAACAATCTTAACGCAACAGCCGCAGCCTCTACAACAGGATCTTTAACACTAAATCCAAGACATACATCATCGAGCTTTAACATA-TCAATTTTAGATGTCCCATAGTCCTTTATAGCATCATTCAATATATTTACCTCAAGTTTTTGTTCAATAACCAAACAGACGGCCTTAAATAATATTCTGATATCTGGATGAACAGGTATCTGCAACAGCTTAGCTATCTTTAAAACGTTTTCCTTAAATTCATCACTGGTAACATCTATGTTATT-AAAAGCGTCGTGGAAGAGTANAGTCTCANATACGTGTATTTCTNNNNNNNNNNNAATATNGTATTCAATATANTGCCTTGCTAGAAGCCATCCACATAGCCCACACCTGATTCATAAAAGGCCCTTTACTGCTGAAATACTATTAATAACTGGCATCCAAAAATGACGGCCCCATCTGCTAACCGGAAACTTAATAATTTCCTTACCATCAACATTGGGCATGGGCAATTGAATTTGAACTCCCCCCNNNNNNNNNNNNATTTGACGTGCGTTTCCCCTTTTTTTTCCCGGGGAAAATGGGAAAATCGATGAAAATTTTCCCCCATTTGGCCAGGCCACCTTAAGGGGAAAAAAATTATATCTCTGGAGATTCTCTCTCCNCAAACANNNNNNAAGGNAGGGGGGAAAGAAAAAATATTGTCCTCTTAAAAAGCCCTTAAAGCGGGGGGGGGGTTCTCTCCTTTCTCG]
[+] EMBL AI975113 [TACGCAGTACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAGTAATAATTTCAGATCACAATGTATTGTTTCATGGAAAAATCTGTTCATTCAACAAATTATGCATTAAAAAATTTAGAAGCCAACTTTTCCAAGTCTTTCGTCAGTTTTTGGATCTGCTGTCAATTTTTG AACATGTACTAT GCTAGCATTTGCTTGGTTTTGTAATTTTCGTAGCCGATCTATATTTAACAATCTTAACGCAACAGCCGCAGCCTCTACAACAGGATCTTTAACACTAAATCCAAGACATACATCATCGAGCTTTAACATA TCAATTTTAGATGTCCCATAGTCCTTTATAGCATCATTCAATATATTTACCTCAAGTTTTTGTTCAATAACCAAACAGACGGCCTTAAATAATATTCTGATATCTGGATGAACAGGTATCTGCAACAGCTTAGCTATCTTTAAAACGTTTTCCTTAAATTCATCACTGGTAACATCTATGTTATT AAAAGCG ]
[+] EMBL CD075443 [ AGATCACAATGTATTGTTTCATGGAAAAATCTGTTCATTCAACAAATTATGCATTAAAAAATTTAGAAGCCAACTTTTCCAAGTCTTTCGTCAGTTTTTGGATCTGCTGTCAATTTTTGAAACATGTACTATGGCTAGCATTTGCTTGGTTTTGTAATTTTCGTAGCCGATCTATATTTAACAATCTTAACGCAACAGCCGCAGCCTCTACAACAGGATCTTTAACACTAAATCCAAGACATACATCATCGAGCTTTAACATATTCAATTTTAGATGTCCCATAGTCCTTTATAGCATCATTCAATATATTTACCTCAAGTTTTTGTTCAATAACCAAACAGACGGCCTTAAATAATATTCTGATATCTGGATGAACAGGTATCTGCAACAGCTTANCTATCTTT AAACGTTTTCCTTAAA TCATCACTGGTAACATCCTNNNNATTAAAAAGCGTCGTGGAAGAGTANAGTCTCANATACGTGTATTTCTNNNNNNNNNNNAATATNGTATTCAATATANTGCCTTGCTAGAAGCCATCCACATAGCCCACACCTGATTCATAAAAGGCCCTTTACTGCTGAAATACTATTAATAACTGGCATCCAAAAATGACGGCCCCATCTGCTAACCGGAAACTTAATAATTTCCTTACCATCAACATTGGGCATGGGCAATTGAATTTGAACTCCCCCCNNNNNNNNNNNNATTTGACGTGCGTTTCCCCTTTTTTTTCCCGGGGAAAATGGGAAAATCGATGAAAATTTTCCCCCATTTGGCCAGGCCACCTTAAGGGGAAAAAAATTATATCTCTGGAGATTCTCTCTCCNCAAACANNNNNNAAGGNAGGGGGGAAAGAAAAAATATTGTCCTCTTAAAAAGCCCTTAAAGCGGGGGGGGGGTTCTCTCCTTTCTCG]
consensusID : consensus_10486#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 914 fasta sequence
[AAAGAAGTTCACTTTAAAAGTAATAATTTCAGATCACAATGTATTGTTTCATGGAAAAATCTGTTCATTCAACAAATTATGCATTAAAAAATTTAGAAGCCAACTTTTCCAAGTCTTTCGTCAGTTTTTGGATCTGCTGTCAATTTTTGAACATGTACTATGCTAGCATTTGCTTGGTTTTGTAATTTTCGTAGCCGATCTATATTTAACAATCTTAACGCAACAGCCGCAGCCTCTACAACAGGATCTTTAACACTAAATCCAAGACATACATCATCGAGCTTTAACATATCAATTTTAGATGTCCCATAGTCCTTTATAGCATCATTCAATATATTTACCTCAAGTTTTTGTTCAATAACCAAACAGACGGCCTTAAATAATATTCTGATATCTGGATGAACAGGTATCTGCAACAGCTTAGCTATCTTTAAAACGTTTTCCTTAAATTCATCACTGTTAACATCTATGTTATTAAAAGCGTTCGTGGAAAGAGTAGAGTTCTCAGATATACTGTTGTGTTGAGTATTTCTAGATGAGTTGTATTCCAATAGTAGTGCTTTGCTAAGAAGCCAATCCAACATAGCCCAACAACTAGATTCATTAAAAGGGCACTTTACTGTCTGGAGATACTTATTTAAATAGCTTGTCCATTCCAAAGATTGTACGTCACGCAATCTTGCTTCAGCAGGAAGAGCTCGAATAATTCTATCCTCTAGCCATACGATCACATTGCGTACATTGGTCAAATCTGAAATATCGAAAACATCGTGCACGGGATAGTTGACAGAATGAAGCTTGAAACGTAGTCGTTCATTAGCCAACATCGTAATAATCCGACGAGGGAGAGAAATATGGAAGAAATCAGACTAAGGGATCAAAAGTCTGGTTATTCTTTAATTTGTTGCATTCAA]
[+] EMBL AI977096 [AAAGAAGTTCACTTTAAAAGTAATAATTTCAGATCACAATGTTTTGTTTCATGGAAAAATTTGTTCATTCAACAAATTATGCATTAAAAAATTTAGAAGCCAACTTTTCCAAGTCTTTCGTCAGTTTTTGGATCCGCTGTCAATTTTTGAACATGTACTATGCTAGCATTTGCTTGGTTTTGTAATTTTCGTAACCGATCTATATTTAACAATCTTAACGCAACAGTCGTAGCCTCTACAACAGGATCTTTTACACTAAATCCACGACATACATCATGGAGCTTTAACATATCAATTTTAGATGTCCCATAGTCCTTTATAGCATCATTCAATATATTTACCTCAAGTTTTTGTTCAATAACCAAACAAACGGCCTTAAA ]
[+] EMBL CD074390 [ ATGTATTGTTTCATGGAAAAATCTGTTCATTCAACAAATTATGCATTAAAAAATTTAGAAGCCAACTTTTCCAAGTCTTTCGTCAGTTTTTGGATCTGCTGTCAATTTTTGAACATGTACTATGCTAGCATTTGCTTGGTTTTGTAATTTTCGTAGCCGATCTATATTTAACAATCTTAACGCAACAGCCGCAGCCTCTACAACAGGATCTTTAACACTAAATCCAAGACATACATCATCGAGCTTTAACATATCAATTTTAGATGTCCCATAGTCCTTTATAGCATCATTCAATATATTTACCTCAAGTTTTTGTTCAATAACCAAACAGACGGCCTTAAATAATATTCTGATATCTGGATGAACAGGTATCTGCAACAGCTTAGCTATCTTTAAAACGTTTTCCTTAAATTCATC ACATCTATGTTATTAAAAGCGTTCGTGGAAAGAGTAGAGTTCTCAGATATACTGTTGTGTTGAGTATTTCTAGATGAGTTGTATTCCAATAGTAGTGCTTTGCTAAGAAGCCAATCCAACATAGCCCAACAACTAGATTCATTAAAAGGGCACTTTACTGTCTGGAGATACTTATTTAAATAGCTTGTCCATTCCAAAGAT ]
[+] EMBL CD073956 [ ATGTATTTTTTCATGGAAAAATCTGCTCATTCAACAAATTATGCATTAAAAAATTTAAAAGCCAACTTTTCCAAGTCTTTCGTCAGTTTTTGGATCTGCTGTCAATTTTTGAACATGTACTATGCTAGCATTTGCTTGGTTTTGTAATTTTCGTAGCCGATCTATATTTAACAATCTTAACGCAACAGCCGCAGCCTCTACAACAGGATCTTTAACACTAAATCCAAGACATACATCATCGAGCTTTAACATATCAATTTTAAATGTCCCATAGTCCTTTATAGCATCATTCAATATATTTACCTCAAGTTTTTGTTCAATAACCAAACAGACGGCCTTAAATAATATTCTGATATCTGGATGAACAGGTATCTGCAACAGCTTAGCTATCTTTAAAACGTTTTCCTTAAATTCATCACTGTTAACATCTATGTTATTAAAAGCGTTCGTGGAAAGAGTAGAGTTATCAGATATACTGTTGTGTTGAGTATTTCTAGATGAGTTGTATTCCAATAGTAGTGCTTTGCTAAGAAGCCAATCCAACATAGCCCAACAACTAGATTCATTAAAAGGGCACTTTACTGTCTGGAGATACTTAT ]
[+] EMBL CD076313 [ ATGTATTGTTTCATGGAAAAATCTGTTCATTCAACAAATTATGCATTAAAAAATTTAAAAGCCAACTTTTCCAAGTCTTTCGTCAGTTTTTGGATCTGCTGTCAATTTTTGAACATGTACTATGCTACCATTTGCTTGGTTTTGTAATTTTCGTAGCCGATCTATATTTAACAATCTTAACGCAACAGCCGCAGCCTTTACAACAGGATCTTTAACACTAAATCCAAGACATACATCATCGAGCTTTAACATATCAATTTTAAATGTCCCATAGTCCTTTATAGCATCATTCAATATATTTACCTCAAGTTTTTGTTCAATAACCAAACAGACGGCCTTAAATAATATTCTGATATCTGGATGAACAGGTATCTGCAACAGCTTAGCTATCTTTAAAACGTTTTCCTTAAATTCATCACTGTTAACATCTATGTTATTAAAAGCGTTCGTGGAAAGAGTAAAGTTCTC ]
[-] EMBL CD159292 [ AATCCAACATAGCCCAACAAATAGATTCATTAAAAGGGCACTTTACTGTCTGGAGATACTTATTTAAACAGCTTGTCCATTCCAAAGATTGTACGTCACGCAATCTTGCTTCAGCAGGAAGAGCTCGAATAATTCTATCCTCTAGCCATACGATCACATTGCGTACATTGGTCAAATCTGAAATATCGAAAACATCGTGCACGGGATAGTTGACAGAATGAAGCTTGAAACGTAGTCGTTCATTAGCCAACATCGTAATAATCCGACGAGGGAGAGAAATATGGAAGAAATCAGACTAAGGGATCAAAAGTCTGGTTATTCTTTAATTTGTTGCATTCAA]
[+] EMBL CD098122 [ ACTTATTTAAATAGCTTGTCCATTCCAAAGATTGTACGTCACGCAATCTTGCTTCAGCAGGAAGAGCTCGAATAATTCTATCCTCTAGCCATACGATCACATTGCGTACATTGGTCAAATCTGAAATATCGAAAACATCGTGCACGGGATAGTTGACAGAATGAAGCTTGAAACGTAGTCGTTCATTAGCCAACATCGTAATAATCCGACGAGGGAGAGAAATATGGAAGAAATCAGACTAAGGGATCAAAAGTCTGGTTATTCTTTAATT ]
consensusID : consensus_10486#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 884 fasta sequence
[GATCACAATGTATTGTTTCATGGAAAAATCTGTTCATTCANCAAATTATGCATTAAAAAATTTAGAAGC-CAACTTTTCCAAGTCTTTCGTCAGTTTTTGGATCTGCTGTCAATTTTTGAACATGTACTATGCTAGCATTTGCTTGGTT-TTGTAATTTTCGTAGCCGATCTATATTTAACAATCTTAACGCAACAGCCGCAGCCTCTACAACAGGATCTTTAACACTAAATCCAAGACATACATCATCGAGCTTTAACATATCAATTTTAGATGTCCCATAGTCCTTTATAGCATCATTCAATATATTTACCTCAAGTTTTTGTTCAATAACCAAACAGACGGCCTTAAATAATATTCTGATATCTGGATGAACAGGTATCTGCAACAGCTTAGCTATCTTTAAAACGTTTTCCTTAAATTCATCACTGTTAACATCTATGTTATTAAAAGCGTTCGTGGAAAGAGTAGAGTTCTCAGATATACTGTTGTGTTGAGTATTTCTAGATGAGTTGTATTCCAATAGTAGTGCTTTGCTAAGAAGCCAATCCAACATAGCCCAACAACTAGATTCATTAAAAGGGCACTTTACTGTCTGGAGATACTTATTTAAATAGCTTGTCCATTCCAAAGATTGTACGTCACGCAATCTTGCTTCAGCAGGAAGAGCTCGAATAATTCTATCCTCTAGCCATACGATCACATTGCGTACATTGGTCAAATCTGAAATATCGAAAACATCGTGCACGGGATAGTTGACAGAATGAAGCTTGAAACGTAGTCGTTCATTAGCCAACATCGTAATAATCCGACGAGGGAGAGAAATATGGAAGAAATCAGACTAAGGGATCAAAAGTCTG--------CCTCGTGCCGAATTNTTGG-CTCGAGGG]
[-] EMBL CD081621 [GATCACAATGTATTGTTTCATGGAAAAATCTGTTCATTCANCAAATTATGCATTAAAAAATTTAGAAGC CAACTTTTCCAAGTCTTTCGTCAGTTTTTGGATCTGCTGTCAATTTTTGAACATGTACTATGCTAGCATTTGCTTGGTT TTGTAATTTTCGTAGCCGATCTATATTTAACAATCTTAACGCAACAGCCGCAGCCTCTACAACAGGATCTTTAACACTAAATCCAAGACATACATCATCGAGCTTTAACATATCAATTTTAGATGTCCCATAGTCCTTTATAGCATCATTCAATATATTTACCTCAAGTTTTTGTTCAATAACCAAACAGACGGCCTTAAATAATATTCTGATATCTGGATGAACAGGTATCTGCAACAGCTTAGCTATCTTTAAAACGTTTTCCTTAAATTCATCACTGTTAACATCTATGTTATTAAAAGCGTTCGTGGAAAGAGTAGAGTTCTCAGATATACTGTTGTGTTGAGTATTTCTAGATGAGTTGTATTCCAATAGTAGTGCTTTGCTAAGAAGCCAATCCAACATAGCCCAACAACTAGATTCATTAAAAGGGCACTTTACTGTCTGGAGATACTTATTTAAATAGCTTGTCCATTCCAAAGATTGTACGTCACGCAATCTTGCTTCAGCAGGAAGAGCTCGAATAATTCTATCCTCTAGCCATACGATCACATTGCGTACATTGGTCAAATCTGAAATATCGAAAACATCGTGCACGGGATAGTTGACAGAATGAAGCTTGAAACGTAGTCGTTCATTAGCCAACATCGTAATAATCCGACGAGGGAGAGAAATATGGAAGAAATCAGACTAAGGGATCAAAAGTCT CCTCGTGCCGAATTNATGG CTCncgg ]
[-] EMBL CD079697 [ GTA TG TTCATG AAAATCTG TCA TCA CNNANTATGCAT AANNA TTAG AGCNNANCTTTT CAAGTC TTCGTCAG TTTTGGATCTGCTGTCAA TTTTGAACATGTACTATGCTAGCA TTGC TGGTTNNTGT ATTTTCGTAGCCGATCTATA TTAACAATCTTAACGCAACAGCCGCAGCCTCTACAACAGGATCTTTAACACTAAATCCAAGACATACATCATCGAGCTTTAACATATCAATTTTAGATGTCCCATAGTCCTTTATAGCATCATTCAATATATTTACCTCAAGTTTTTGTTCAATAACCAAACAGACGGCCTTAAATAATATTCTGATATCTGGATGAACAGGTATCTGCAACAGCTTAGCTATCTTTAAAACGTTTTCCTTAAATTCATCACTGTTAACATCTATGTTATTAAAAGCGTTCGTGGAAAGAGTAGAGTTATCAGATATACTGTTGTGTTGAGTATTTCTAGATGAGTTGTATTCCAATAGTAGTGCTTTGCTAAGAAGCCAATCCAACATAGCCCAACAACTAGATTCATTAAAAGGGCACTTTACTGTCTGGAGATACTTATTTAAATAGCTTGTCCATTCCAAAGATTGTACGTCACGCAATCTTGCTTCAGCAGGAAGAGCTCGAATAATTCTATCCTCTAGCCATACGATCACATTGCGTACATTGGTCAAATCTGAAATATCGAAAACATCGTGCACGGGATAGTTGACAGAATGAAGCTTGAAACGTAGTCGTTCATTAGCCAACATCGTAATAATCCGACGAGGGAGAGAAATATGGAAGAAATCAGACTAAGGGATCAAAAGTNTGGC CCTCGTGCCAAATTNTTGG ]
[+] EMBL CD177935 [ TGAACATGTACTATGCTAGCATTTGCTTGGTT TTGTAATTTTCGTCGCCGATCTATATTTAACAATCTTAACGCAACATCCGCAGCCTCTACAACAGGATCTTTAACACT ]
[-] EMBL AA791329 [ gaAACTTTGACTAT CTAGCA TTGCTTGG T TTGT ATTTACGTAGCCGATCTATATTTAACAATCTTAACGCAACAGCCGCAGCCTCTACAACGGGATCTTTAACACTAAATCCAAGACATACATCATCGAGCTTTAACATATCAATTTTAGATGTCCCATAG CTTTTATAGCATCATTCAATATATTTACCTCAAGTTTTTGTTCAATAACCAAACAGACGGCCTTAAATAATATTCTGATATCTGGATGAACAGGTATCTGCAAC ]
[-] EMBL CD082723 [ GGATCTTTAACACTAAATCCAAGACATACATCATCGAGCTTTAACATATCAATNTTAGATGTCCCATAGTCCTTTATAGCATCATTCAATATATTTACCTCAAGTTTTTGTTCAATAACCAAACAGACGGCCTTAAATAATATTCTGATATCTGGATGAACAGGTATCTGCAACAGCTTAGCTATCTTTAAAACGTTTTCCTTAAATTCATCACTGTTAACATCTATGTTATTAAAAGCGTTCGTGGAAAGAGTAGAGTTCTCAGATATACTGTTGTGTTGAGTATTTCTAGATGAGTTGTATTCCAATAGTAGTGCTTTGCTAAGAAGCCAATCCAACATAGCCCAACAACTAGATTCATTAAAAGGGCACTTTACTGTCTGGAGATACTTATTTAAATAGCTTGTCCATTCCAAAGATTGTACGTCACGCAATCTTGCTTCAGCAGGAAGAGCTCGAATAATTCTATCCTCTAGCCATACGATCACATTGCGTACATTGGT AAATCTGAAATATCGAAAACATCGTGCACGGGATAGTTGACAGAATGAAGCTTGAAACGTAGTCGTTCATTAGCCAACATCGTAATAATCCGACGAGGGAGAGAAATATGGAAGAAATCAGACTAAGGGATCAAAAGTCTG CCTCGTGCCGAATTNTGGC CTCGAGGG]
[-] EMBL CD135237 [ TTAACACTAAATCCAAGACATACATCATCGAGCTTTAACATATCAATTTTAGATGTCCCATAGTCCTTTATAGCATCATTCAATATATTTACCTCAAGTTTTTGTTCAATAACCAAACAGACGGCCTTAAATAATATTCTGATATCTGGATGAACAGGTATCTGCAACAGCTTAGCTATCTTTAAAACGTTTTCCTTAAATTCATCACTGTTAACATCTATGTTATTAAAAGCGTTC ]
[-] EMBL CD080479 [ AAGACATACATCATCGAGCTTACNNATATCAATTTTAGATGTCCCATAGTCCTTTATAGCATCATTCAATATATTTACCTCAAGTTTTTGTTCAATAACCAAACAGACGGCCTTAAATAATATTCTGATATCTGGATGAACAGGTATCTGCAACAGCTTAGCTATCTTTAAAACGTTTTCCTTAAATTCATC ACATCTATGTTATTAAAAGCGTTCGTGGAAAGAGTAGAGTTCTCAGATATACTGTTGTGTTGAGTATTTCTAGATGAGTTGTATTCCAATAGTAGTGCTTTGCTAAGAAGCCAATCCAACATAGCCCAACAACTAGATTCATTAAAAGGGCACTTTACTGTCTGGAGATACTTATTTAAATAGCTTGTCCATTCCAAAGATTGTACGTCACGCAATCTTGCTTCAGCAGGAAGAGCTCGAATAATTCTATCCTCTAGCCATACGATCACATTGCGTACATTGGTCAAATCTGAAATATCGAAAACATCGTGCACGGGATAGTTGACAGAATGAAGCTTGAAACGTAGTCGTTCATTAGCCAACATCGTAATAATCCGACGAGGGAGAGAAATATGGAAGAAATCAGACTAAGGGATCAAAAGTCTGGTTATTNCCCTCGTGCCGAA TNTTGGCCTCGAG ]
[+] EMBL CD137425 [ AGCATCATTCAATATATTTACCTCAAGTTTTTGTTCAATAACCAAACAGTCGGCCTTAAATAATATTCTGATATCTGGATGAACAGGTATCTGCAACAGCTTAGCTATCTTTAAAACGTTTTCCTTAAATTCATCACTGTTAACATCTATGTTATTAAAAGCGTTCGTGGAAAGAGTAGAGTTCTCAGATATACTGTTGTGTTGAGTATTTCTAGATGAGTTGTATTCCAATAGTAGCGCTTTGCTAAGAAGCCAATCCAACATAGCCCAACAACTAGATTCATTAAAAGGGCACTTTACTGTCTGGAGATACTTATTTAAATAGCTTGTCCATTCCAAAGATTGTACGTCACGCAATCTTGCTTCAGCAGGAAGAGCTCGAATAATTCTATCCTCTAGCCATACGATCACATTGCGTACATTGGTC ]
[-] EMBL CD196435 [ cAACATCTATGTTATTAAAAGCGTTCGTGGAAAGAGTAGAGTTCCCAGATATACTGTTGTGTTGAGTATTTCTAGATGAGTTGTATTCCAATAGTAGTGCTTTGCTAAGAAGCCAATCCAACATAGCCCAACAACTAGATTCATTAAAAGGGCACTTTACTGTCTGGAGATACTTATTTAAATAGCTTGTCCATTCCAAAGATTGTACGTCACGCAATCTTGCTTCAGCAGGAAGAGCTCGAATAATTCTATCCTCTAGCCATACGATCACATTGCGTACATTGGTCAAATCTGAAATATCGAAAACATCGTGCACGGGATAGTTGACAGAATGAAGCTTGAAACGTAGTCGTTCATTAGCCAACATCGTAATAATCCGACGAGGGAGAGAAATATGGAAGAAATCAGACTAAGGGATCAAAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10486#1 --------------------------------------------AAAGAAGTTCACTTTA 16
consensus_10486#2 ------------------------------------------------------------
consensus_10486#0 TACGCAGTACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTA 60
consensus_10486#1 AAAGTAATAATTTCAGATCACAATGTATTGTTTCATGGAAAAATCTGTTCATTCAACAAA 76
consensus_10486#2 ---------------GATCACAATGTATTGTTTCATGGAAAAATCTGTTCATTCANCAAA 45
consensus_10486#0 AAAGTAATAATTTCAGATCACAATGTATTGTTTCATGGAAAAATCTGTTCATTCAACAAA 120
**************************************** ****
consensus_10486#1 TTATGCATTAAAAAATTTAGAAGCCAACTTTTCCAAGTCTTTCGTCAGTTTTTGGATCTG 136
consensus_10486#2 TTATGCATTAAAAAATTTAGAAGCCAACTTTTCCAAGTCTTTCGTCAGTTTTTGGATCTG 105
consensus_10486#0 TTATGCATTAAAAAATTTAGAAGCCAACTTTTCCAAGTCTTTCGTCAGTTTTTGGATCTG 180
************************************************************
consensus_10486#1 CTGTCAATTTTTGAACATGTACTATGCTAGCATTTGCTTGGTTTTGTAATTTTCGTAGCC 196
consensus_10486#2 CTGTCAATTTTTGAACATGTACTATGCTAGCATTTGCTTGGTTTTGTAATTTTCGTAGCC 165
consensus_10486#0 CTGTCAATTTTTGAACATGTACTATGCTAGCATTTGCTTGGTTTTGTAATTTTCGTAGCC 240
************************************************************
consensus_10486#1 GATCTATATTTAACAATCTTAACGCAACAGCCGCAGCCTCTACAACAGGATCTTTAACAC 256
consensus_10486#2 GATCTATATTTAACAATCTTAACGCAACAGCCGCAGCCTCTACAACAGGATCTTTAACAC 225
consensus_10486#0 GATCTATATTTAACAATCTTAACGCAACAGCCGCAGCCTCTACAACAGGATCTTTAACAC 300
************************************************************
consensus_10486#1 TAAATCCAAGACATACATCATCGAGCTTTAACATATCAATTTTAGATGTCCCATAGTCCT 316
consensus_10486#2 TAAATCCAAGACATACATCATCGAGCTTTAACATATCAATTTTAGATGTCCCATAGTCCT 285
consensus_10486#0 TAAATCCAAGACATACATCATCGAGCTTTAACATATCAATTTTAGATGTCCCATAGTCCT 360
************************************************************
consensus_10486#1 TTATAGCATCATTCAATATATTTACCTCAAGTTTTTGTTCAATAACCAAACAGACGGCCT 376
consensus_10486#2 TTATAGCATCATTCAATATATTTACCTCAAGTTTTTGTTCAATAACCAAACAGACGGCCT 345
consensus_10486#0 TTATAGCATCATTCAATATATTTACCTCAAGTTTTTGTTCAATAACCAAACAGACGGCCT 420
************************************************************
consensus_10486#1 TAAATAATATTCTGATATCTGGATGAACAGGTATCTGCAACAGCTTAGCTATCTTTAAAA 436
consensus_10486#2 TAAATAATATTCTGATATCTGGATGAACAGGTATCTGCAACAGCTTAGCTATCTTTAAAA 405
consensus_10486#0 TAAATAATATTCTGATATCTGGATGAACAGGTATCTGCAACAGCTTAGCTATCTTTAAAA 480
************************************************************
consensus_10486#1 CGTTTTCCTTAAATTCATCACTGTTAACATCTATGTTATTAAAAGCGTTCGTGGAAAGAG 496
consensus_10486#2 CGTTTTCCTTAAATTCATCACTGTTAACATCTATGTTATTAAAAGCGTTCGTGGAAAGAG 465
consensus_10486#0 CGTTTTCCTTAAATTCATCACTGGTAACATCTATGTTATTAAAAGCGT-CGTGGAA-GAG 538
*********************** ************************ ******* ***
consensus_10486#1 TAGAGTTCTCAGATATACTGTTGTGTTGAGTATTTCTAGATGAGTTGTATTCCAATAGTA 556
consensus_10486#2 TAGAGTTCTCAGATATACTGTTGTGTTGAGTATTTCTAGATGAGTTGTATTCCAATAGTA 525
consensus_10486#0 TANAGT-CTCANATACG-TGTATTTCTNNNNNNNNNNNAATA--TNGTATTC-AATA-TA 592
** *** **** *** *** * * ** * ****** **** **
consensus_10486#1 GTGCTTTGCTAAGAAGCCAATCCAACATAGCCCAACAACTAGATTCATTAAAAGGGCACT 616
consensus_10486#2 GTGCTTTGCTAAGAAGCCAATCCAACATAGCCCAACAACTAGATTCATTAAAAGGGCACT 585
consensus_10486#0 NTGCCTTGCTA-GAAGCCATCC--ACATAGCCCA--CACCTGATTCAT--AAAAGGCCCT 645
*** ****** ******* * ********** ** ******* *** *** **
consensus_10486#1 TTACTGTCTGGAGATACTTA----------TTTAAATA-GCTTGTCCATTCCAAAGATTG 665
consensus_10486#2 TTACTGTCTGGAGATACTTA----------TTTAAATA-GCTTGTCCATTCCAAAGATTG 634
consensus_10486#0 TTACTGCTGAAATACTATTAATAACTGGCATCCAAAAATGACGGCCCCATCTGCTAACCG 705
****** * * *** * *** * * * ** ** * *
consensus_10486#1 TACGTCACGCAATCTTGCT-TCAGCAGGAA-GAGCTCGAATAATTCTAT--------CCT 715
consensus_10486#2 TACGTCACGCAATCTTGCT-TCAGCAGGAA-GAGCTCGAATAATTCTAT--------CCT 684
consensus_10486#0 GAAACTTAATAATTTCCTTACCATCAACATTGGGCATGGGCAATTGAATTTGAACTCCCC 765
* *** * * ** ** * * ** * **** ** **
consensus_10486#1 CTAGCCATACGATCACATTGCGTACATT----------------GGTCAAATCTGAAATA 759
consensus_10486#2 CTAGCCATACGATCACATTGCGTACATT----------------GGTCAAATCTGAAATA 728
consensus_10486#0 CCNNNNNNNNNNNNATTTGACGTGCGTTTCCCCTTTTTTTTCCCGGGGAAAATGGGAAAA 825
* * * *** * ** ** *** * ** *
consensus_10486#1 TCGA-AAACATCGTGCACGGGATAGTTGA--CAGAATGAAGCTTGAAACGTAGTCGTTCA 816
consensus_10486#2 TCGA-AAACATCGTGCACGGGATAGTTGA--CAGAATGAAGCTTGAAACGTAGTCGTTCA 785
consensus_10486#0 TCGATGAAAATTTTCCCCCATTTGGCCAGGCCACCTTAAGGGGAAAAAAATTATATCTCT 885
**** ** ** * * * * * ** * * * *** * * **
consensus_10486#1 TTAG---CCAACATCGTAATAATCCGACGAGGGAGAGAAATATGGAAGAA-ATCAGACT- 871
consensus_10486#2 TTAG---CCAACATCGTAATAATCCGACGAGGGAGAGAAATATGGAAGAA-ATCAGACT- 840
consensus_10486#0 GGAGATTCTCTCTCCNCAAACANNNNNNAAGGNAGGGGGGAAAGAAAAAATATTGTCCTC 945
** * * * ** * *** ** * * * ** ** ** **
consensus_10486#1 ---AAGGGATCAAAAGTCTGGTTATTCTTTAATTTGTTGCATTCAA- 914
consensus_10486#2 ---AAGGGATCAAAAGTCTGCCTCGTGCCGAATTNTTGGCTCGAGGG 884
consensus_10486#0 TTAAAAAGCCCTTAAAGCGGGGGGGGGGTTCTCTCCTTTCTCG---- 988
** * * ** * * * * *
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||