|
These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10487#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1309 fasta sequence
[GATCTATGCCTCATTTGTTATACCAGTGGCAGTACAGGCTTAGCCAAGGGTGTCATGATTAGTCATGAAAATTTGGTAGATACAATCTGCTCTACAATGGAGTCTACGGAAGCAAAGTTGTATTGTCGGAATTCTGTTCACATTTCATATCTACCTTTTGCTCATATAATGGAGCAAGTTACTTCGTCTGCTGCTGTATTTTGTGGAGCACAAATCGGATTCCTTTACTGGAGCAATTACTGGATTGTTAGATGATGCTGAGGCTCTAAAACCTACTGTACTTCCGGCGGTTCCACGTGTCTTATCACGTATATATGAAAAATACCAGAATGCACTTGGTAATTCATTTATAAAAAGGTATCTGTATGAATATACTCTTAAAAGAAATCTGAAGATTTTAAATAGTGGGAAAATTAATCATCATGATATTCTTGATACACTTTTTTTCAAGAAGCTCCGTCAGGCTCTTGGTGGAAGAGTATGTATGATAGTTACAGGGGGTGCACCACTTTCATCAGAGCTGTTCAACTTCTTTCGAGCTGCTTTCAATGGTCTTACTCGCCGTAGGTTACGGATCAACTGAAGTTTCTGGTGTGGCTAGTGCAACTGTTCTAGGGGAATCTCATGAAGGTACTGNTGGTGCTATCACTTCCAGGATCGAAGTCAAACTTGCTGATGTTCCAGATATGGATATTGTAGCTCTCAGAGATAACAGAGGCGAGATATGTATTAAGGGGAAGCGGTGTACCAAAGGTTATTTCAAAGATCCTGAAAGTACAGTCCAAATTATTGATGTTGATGGTTGGTTACATACTGGTGACATTGGAGAATGGACTACTGTGACAGTTTAACTATGATGCGAAAATTTCCGAAGCTATTTTTCTACGATTTTCTTTATATCTATTGATTGGATGTTTGATAAGTACTTTGGTTTTATTATTTTCGTATTACCCTAGTTCCAAGCTTTTGTTCGAACTGTAAATTGTTGATATACCATTTTCCACTCATAAACTAGAACCGATTATTTGTGCACCCAGTACTCCGTTTTTCTCATCATTAATGTTGTTGTTCCATGTTAATACCGTTACTCAGCTGGCCCACTGCGTGGTTTGGTCTTGTTTGTATATAAATGAATGTCTGAAATATAATAATGATCTTGGACGGGTGATGATTGGTCTCGTGTTCTTCCTCTTCGTTCGGAGCTAGTTAGTATTGAGCCAACCGTCAAGTATAGAGTACCAGTCTTCCTCCTGTTGGCTACGTTTTGGTTGATTATGGTTTTCTATGTTTATTGGTGGGTGGTAAGACA]
[+] EMBL CD072527 [GATCTATGCCTCATTTGTTATACCAGTGGCAGTACAGGCTTAGCCAAGGGTGTCATGATTAGTCATGAAAATTTGGTAGATACAATCTGCTCTACAATGGAGTCTACGGAAGCAAAGTTGTATTGTCGGAATTCTGTTCACATTTCATATCTACCTTTTGCTCATATAATGGAGCAAGTTACTTCGTCTGCTGCTGTATTTTGTGGAGCACAAATCGGATTCCTTTACTGGAGCA ]
[+] EMBL CD078561 [ cacgaggAGATACTTCGTCTGCTGCTGTATTTTGTGGAGCACAAATCGGATTCC TTACTGGAGCAATTACTGGATTGTTAGATGATGCTGAGGCTCTAAAACCTACTGTACTTCCGGCGGTTCCACGTGTCTTATCACGTATATATGAAAAATACCAGAATGCACTTGGTAATTCATTTATAAAAAGGTATCTGTATGAATATACTCTTAAAAGAAATCTGAAGATTTTAAATAGTGGGAAAATTAATCATCATGATATTCTTGATACACTTTTTTTCAAGAAGCTCCGTCAGGCTCTTGGTGGAAGAGTATGTATGATAGTTACAGGGGGTGCACCACTTTCATCAGAGCTGTTCAACTTCTTTCGAGCTGCTTTCAATGGTCTTACTCGCCGTAGGTTACGGATCAACTGAAGTTTCTGGTGTGGCTAGTGCAACTGTTCTAGGGGAATCTCATGAAGGTACTGNTGGTGCTATCACTTCCAGGATCGAAGTCAAACTTGCTGATGTTCCAGATATGG ]
[+] EMBL CD138770 [ GTGCTATCACTTCCAGGATCGAAGTCAAACTTGCTGATGTTCCAGATATGGATATTGTAGCTCTCAGAGATAACAGAGGCGAGATATGTATTAAGGGGAAGCGGTGTACCAAAGGTTATTTCAAAGATCCTGAAAGTACAGTCCAAATTATTGATGTTGATGGTTGGTTACATACTGGTGACATTGGAGAATGGACTACTGTGACAGTTTAACTGTGATGCGAAAATTTCCGAAGCTATTTTTCTACGATTTTCTTTATATCTATTGATTGGATGTTTGATAAGTACTTTGGTTTTATTATTTTCGTATTACCCTAGTTCCAAGCTTTTGTTCGAACTGTAAATTGTCGATATACCATTTTCCACTCATAAACTAGAACCGATTATTTGT ]
[+] EMBL CD069763 [ TGCTATCACTTCCAGGATCGAAGTCAAACTTGCTGATGTTCCAGATATGGATATTGTAGCTCTCAGAGATAACAGAGGCGAGATATGTATTAAGGGGAAGCGGTGTACCAAAGGTTATTTCAAAGATCCTGAAAGTACAGTCCAAATTATTGATGTTGATGGTTGGTTACATACTGGTGACATTGGAGAATGGACTACTGTGACAGTTTAACTATGATGCGAAAATTTCCGAAGCTATTTTTCTACGATTTTCTTTATATCTATTGATTGGATGTTTGATAAGTACTTTGGTTTTATTATTTTCGTATTACCCTAGTTCCAAGCTTTTGTTCGAACTGTAAATTGTTGATATACCATTTTCCACTCATAAACTAGAACCGATTATTTGTGCACCCAGTACTCCGTTTTTCTCATCATTAATGTTGTTGTTCCATGTTAATACCG ]
[-] EMBL CD069766 [ CAGATATGGATATTGTAGCTCTCAGAGATAACAGAGGCGAGATATGTATTAAGGGGAAGCGGTGTACCAAAGGTTATTTCAAAGATCCTGAAAGTACAGTCCAAATTATTGATGTTGATGGTTGGTTACATACTGGTGACATTGGAGAATGGACTACTGTGACAGTTTAACTATGATGCGAAAATTTCCGAAGCTATTTTTCTACGATTTTCTTTATATCTATTGATTGGATGTTTGATAAGTACTTTGGTTTTATTATTTTCGTATTACCCTAGTTCCAAGCTTTTGTTCGAACTGTAGATTGTTGATATACCATTTTCCACTCATAAACTAGAACCGATTATTTGTGCACCCAGTACTCCGTTTTTCTCATCATTAATGTTGTTGTTCCATGTTAATACCGTTACTCAGCTGGCCCACTGCGTGGTTTGGTCTTGTTTGTATATAAATGAATGTCTGAAATATAATAATGATCTTGGACGGGTGA ]
[+] EMBL CD111509 [ TTTTCTTTATATCTATTGATTGGATGTTTGATAAGTACTTTGGTTTTATTATTTTCGTATTACCCTAGTTCCAAGCTTTTGTTCGAACTGTAAATTGTTGATATACCATTTTCCACTCATAAACTAGAACCGATTATTTGTGCACCCAGTACTCCGTTTTTCTCATCATTAATGTTGTTGTTCCATGTTAATACCGTTACTCAGCTGGCCCACTGCGTGGTTTGGTCTTGTTTGTATATCAATGAATGTCTGAAATATAATAATGATCTTGGACGGGTGATGATTGGTCTCGTGTTCTTCCTCTTCGTTCGGAGCTAGTTAGTATTGAGCCAACCGTCAAGTATAGAGTACCAGTCTTCCTCCTGTTGGCTACGTTTTGGTTGATTATGGTTTTCTATGTTTATTGGTGGGTGGTAAGACA]
consensusID : consensus_10487#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 978 fasta sequence
[AGGCCAANAATTTGGCACGAGGGTCACATACTGGTGACATTGGAGAATGGACTACTGAGGGAGCTTTGAAAATCGTTGATCGTGTTAAAAGTATCTTCAAGTTGGCACAGGGAGAATATGTAGCTCCAGAAAAATTAGAACTGGTTTATAGGGCTGTCAACTTATAGATCAAATATTTGTTGATGGAAAACCGGAACAAAATTTCCCTGTCGCTGTTGTCACTCCGAATTTCGTAAACTTACGTTCATGTATTAACTCTTACCTAAAATCTGGTTGTAATGTAGATGATGGGAAAATATTCGATATGAGACCATCAGATACTTTTCGATTATCTGACAACGATATTTGCAAAAGCATAGAAATCCGACGATTTGTTTTGCGAAAAATGAATGAAGTCGCAACAGATAAGGGACTAAAAGGCTTTG-AAATGG-T-AAAATCTATCTACCT-AAATGATAATCCATTTACTGTTGAAAATGGATTGTTAACTCCG-ACCATGAAAATATCACG-TCAAAATG-CCCG-TCGACACTTTCAATCTATCGTTGAATCATTATATTTGGAAACATGTTCTGAAGGCCAATG-CATAAGTAACAATTG-TAATTAGTAGCTCAATTTGTCCCACTGCCATTGTTTACTATCTTTAGCCAAAAAAT-CACATCACATACGGCAATCATCCTGTTGTTCGTACATAAAAAAATACAGGGGCAGCACCCCGTCGTTATTTCTTTTTTCTACCACAATTATATTGTTTATTGACTTTTTTAATTCGTGCAAAACAATCCATATTATATATATTTCTCTTTTATTCAGTGTATCCTGGGTGAAAATTTATCGTGAAACTCATTCCTATTTATTTATTTAAAATAATTTATATTTCTTCAATTGAAACAGTAAATTACAAGAATGCAACCACGCAAGATAGATAGTGGGAATATAACAAACATTGTAAAGCGAAATATATTATACGTAATAAACTTGAAA]
[+] EMBL CD081082 [AGGCCAANAATTTGGCACGAGGGTCACATACTGGTGACATTGGAGAATGGACTACTGAGGGAGCTTTGAAAATCGTTGATCGTGTTAAAAGTATCTTCAAGTTGGCACAGGGAGAATATGTAGCTCCAGAAAAATTAGAACTGGTTTATAGGGCTGTCAACTTATAGATCAAATATTTGTTGATGGAAAACCGGAACAAAATTTCCCTGTCGCTGTTGTCACTCCGAATTTCGTAAACTTACGTTCATGTATTAACTCTTACCTAAAATCTGGTTGTAATGTAGATGATGGGAAAATATTCGATATGAGACCATCAGATACTTTTCGATTATCTGACAACGATATTTGCAAAAGCATAGAAATCCGACGATTTGTTTTGCGAAAAATGAATGAAGTCGCAACAGATAAGGGACTAAAAGGCTTTG AAATGG T AAAATCTATCTACCT AAATGATAATCCATTTACTGTTGAAAATGGATTGTTAACTCCG ACCATGAAAATATCACG TCAAAATG CCCG TCGACACTTTCAATCTATCGTTGAATCATTATATTTGGAAACATGTTCTGAAGGCCAATG CATAAGTAACAATTG TAATTAGTAGCTCAATTTGTCCCACTGCCATTGTTTACTATCTTTAGCCAAAAAAT CACATCACATACGGCAATCATCCTGTTGTTCGTACAT AAAAAATACAGGGGCAGCACCCCGTCGTTATTTCTTTTTTCTACCACAATTATATTGGTTATTGACTNTNTAANTNCGTGNCANACAtn ]
[-] EMBL CD074904 [ CCAGAAAAATTAGAACTGGTTTATAGGGCTGTCAACTTATAGATCAAATATTTGTTGATGGAAAACCGGAACAAAATTTCCCTGTCGCTGTTGTCACTCCGAATTTCGTAAACTTACGTTCATGTATTAACTCTTACCTAAAATCTGGTTGTAATGTAGATGATGGGAAAATATTCGATATGAGACCATCAGATACTTTTCGATTATCTGACAACGATATTTGCAAAAGCATAGAAATCCGACGATTTGTTTTGCGAAAAATGAATGAAGTCGCAACAGATAAGGGACTAAAAGGCTTTG AAATGG T AAAATCTATCTACCT AAATGATAATCCATTTACTGTTGAAAATGGATTGTTAACTCCG ACCATGAAAATATCACG TCAAAATG CCCG TCGACACTTTCAATCTATCGTTGAATCATTATATTTGGAAACATGTTCTGAAGGCCAATG CATAAGTAACAATTG TAATTAGTAGCTCAATTTGTCCCACTGCCATTGTTTACTATCTTTAGCCAAAAAAT CACATCACATACGGCAATCATCCTGTTGTTCGTACATAAAAAAATACAGGGGCAGCACCCCGTCGTTATTTCTTTTTTCTACCACAATTATATTGTTTATTGACTTTTTTAATTCGTGCAAAACAATCC ]
[-] EMBL CD069375 [ tTTGTCACTCCGAATTTCGTAAACTTACGTTCATGTATTAACTCTTACCTAAAATCTGGTTGTAATGTAGATGATGGGAAAATATTCGATATGAGACCATCAGATACTTTTCGATTATCTGACAACGATATTTGCAAAAGCATAGAAATCCGACGATTTGTTTTGCGAAAAATGAATGAAGTCGCAACAGATAAGGGACTAAAAGGCTTTG AAATGG T AAAATCTATCTACCT AAATGATAATCCATTTACTGTTGAAAATGGATTGTTAACTCCG ACCATGAAAATATCACG TCAAAATG CCCG TCGACACTTTCAATCTATCGTTGAATCATTATATTTGGAAACATGTTCTGAAGGCC ATG CATAAGTAACAATTG TAATTA ]
[-] EMBL CD075259 [ TGTATTAACTCTTACCTAAAATCTGGTTGTAATGTAGATGATGGGAAAATATTCGATATGAGACCATCAGATACTTTTCGATTATCTGACAACGATATTTGCAAAAGCATAGAAATCCGACGATTTGTTTTGCGAAAAATGAATGAAGTCGCAACAGATAAGGGACTAAAAGGCTTTG AAATGG T AAAATCTATCTACCT AAATGATAATCCATTTACTGTTGAAAATGGATTGTTAACTCCG ACCATGAAAATATCACG TCAAAATG CCCG TCGACACTTTCAATCTATCGTTGAATCATTATATTTGGAAACATGTTCTGAAGGCCAATG CATAAGTAACAATTG TAATTAGTAGCTCAATTTGTCCCACTGCCATTGTTTACTATCTTTAGCCAAAAAAT CACATCACATACGGCAATCATCCTGTTGTTCGTACATAAAAAAATACAGGGGCAGCACCCCGTCGTTATTTCTTTTTTCTACCACAATTATATTGTTTATTGACTTTTTTAATTCGTGCAAAACAAT ]
[+] EMBL SMAA32039 [ AGGCTTTGAAAATGGCTAAAAATCTATCTACCTAAAATGATAATCCATTTACTGTTGAAAATGGATTGTTAACTCCGCACCATGAAAATATCACGCTCAAAATGACCCGTTCGACACTTTCAATCTATCGTTGAATCATTATATTTGGAAACATGTTCTGAAGGCCAATGCCATAAGTAACAATTGTTAATTAGTAGCTCAATTTGTCCCACTGCCATTGTTTACTATCTTTCGC ]
[+] EMBL SMAA69237 [ CGTTGAATCATTATATTTGGAAACATGTTCTGAAGGCCAATG CATAAGTAACAATTG TAATTAGTAGCTCAATTTGT CCACTGCCATTGTTTACTATCTTTAGCCAAAAAATACAC TCACATA GGCAATCATC GTTGTTGCTACATAAAA ]
[-] EMBL AI975796 [ TAGTAGCTCAATTTGTCCCACTGCCATTGTTTACTATCTTTAGCCAAAAAAT CACATCACATACGGCAATCATCCTGTTGTTCGTACATAAAAAAATACAGGGGCAGCACCCCGTCGTTATTTCTTTTTTCTACCACAATTATATTGTTTATTGACTTTTTTAATTCGTGCAAAACAATCCATATTATATATATTTCTCTTTTATTCAGTGTATCCTGGGTGAAAATTTATCGTGAAACTCATTCCTATTTATTTATTTAAAATAATTTATATTTCTTCAATTGAAACAGTAAATTACAAGAATGCAACCACGCAAGATAGATAGTGGGAATATAACAAACATTGTAAAGCGAAATATATTATACGTAATAAACTTGAAA]
consensusID : consensus_10487#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 932 fasta sequence
[CCTCGAGGCCAAAAATTCGGCACGAGGGTTGGTGCTATCACTTCCAGGATCGAAGTCAAACTTGCTGATGTTCCAGATATGGATATTGTAGCTCTCAGAGATAACAGAGGCGAGATATGTATTAAGGGGAAGCGGTGTACCAAAGGTTATTTCAAAGATCCTGAAAGTACAGTCCAAATTATTGATGTTGATGGTTGGTTACATACTGGTGACATTGGAGAATGGACTACTGAGGGAGCTTTGAAAATCGTTGATCGTGTTAAAAGTATCTTCAAGTTGGCACAGGGAGAATATGTAGCTCCAGAAAAATTAGAACTGGTTTATCAGGGCTGTCAACTTATAGATCAAATATTTGTTGATGGAAAACCGGAACAAAATTTCCCTGTCGCTGTTGTCACTCCGAATTTCGTAAACTTACGTTCATGTATTAACTCTTACCTAAAATCTGGTTGTAATGTAGATGATGGGAAAATATTCGATATGAGACCATCAGATACTTTTCGATTATCTGACAACGATATTTGCAAAAGCATAGAAATCCGACGATTTGTTTTGCGAAAAATGAATGAAGTCGCAACAGATAAGGGACTAAAAGGCTTTGAAATGGTAAAATCTATCTACCTAAATGATAATCCATTTACTGTTGAAAATGGATTGTTAACTCCGACCATGAAAATATCACGTCAAAATGCCCGTCGACACTTTCAATCTATCNGTGAATCATTTATATTGGAAANCATGTCTGAAGNNNCATGCATAGTACAATTGTATTAGTAGCTAAATTTGNCCACTGNCATTGNNTACTATCTTNAGCAAAAAATCCATNACATACGGCAATCATNCNNTGTGTCGTACATAAAAATCAGGGGCAGNACCCGNNCGTATTCTTTTTCTACCAATTTAATTGTATGGACTTTTTAAATCNGCNAAAT]
[+] EMBL CD080613 [CCTCGAGGCCAAAAATTCGGCACGAGGGTTGGTGCTATCACTTCCAGGATCGAAGTCAAACTTGCTGATGTTCCAGATATGGATATTGTAGCTCTCAGAGATAACAGAGGCGAGATATGTATTAAGGGGAAGCGGTGTACCAAAGGTTATTTCAAAGATCCTGAAAGTACAGTCCAAATTATTGATGTTGATGGTTGGTTACATACTGGTGACATTGGAGAATGGACTACTGAGGGAGCTTTGAAAATCGTTGATCGTGTTAAAAGTATCTTCAAGTTGGCACAGGGAGAATATGTAGCTCCAGAAAAATTAGAACTGGTTTATCAGGGCTGTCAACTTATAGATCAAATATTTGTTGATGGAAAACCGGAACAAAATTTCCCTGTCGCTGTTGTCACTCCGAATTTCGTAAACTTACGTTCATGTATTAACTCTTACCTAAAATCTGGTTGTAATGTAGATGATGGGAAAATATTCGATATGAGACCATCAGATACTTTTCGATTATCTGACAACGATATTTGCAAAAGCATAGAAATCCGACGATTTGTTTTGCGAAAAATGAATGAAGTCGCAACAGATAAGGGACTAAAAGGCTTTGAAATGGTAAAATCTATCTACCTAAATGATAATCCATTTACTGTTGAAAATGGATTGTTAACTCCGACCATGAAAATATCACGTCAAAATGCCCGTCGACACTTTCAATCTATCNGTGAATCATTTATATTGGAAANCATGTCTGAAGNNNCATGCATAGTACAATTGTATTAGTAGCTAAATTTGNCCACTGNCATTGNNTACTATCTTNAGCAAAAAATCCATNACATACGGCAATCATNCNNTGTGTCGTACATAAAAATCAGGGGCAGNACCCGNNCGTATTCTTTTTCTACCAATTTAATTGTATGGACTTTTTAAATCNGCNAAAT]
[-] EMBL BG932380 [ TAGAACTGGTTTATCAGGGCTGTCAACTTATAGATCAAATATTTGTTGATGGAAAGCCGGAACAAAATTTCCCTGTCGCTGTTGTCACTCCGAATTTCGTAAACTTACGTTCATGTATTAACTCTTACCTAAAATCTGGTTGTAATGTAGATGATGGGAAAATATTCGATATGAGACCATCAGATACTTTTCGATTATCTGACAACGATATTTGCAAAAGCATAGAAATCCGACGATTTGTTTTGCGAAAAATGAATGAAGTCGCAACAGATAAGGGACTAAAAGGCTTTGAAATGGTAAAATCTATCTACCTAAATGATAATCCATTTACTGTTGAAAATGGATTGTTAACT ]
consensusID : consensus_10487#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 487 fasta sequence
[ATTCGGTACGAGGACTCTGTTCACATTTCATATCTACCTTTTGCTCATATAATGGAGCAAGTTACTTCGTCTGCTGCTGTATTTTGTGGAGCACAAATCGGATTCCTTACTGGAGCAATCACTGGATTGTTAAATGATGCTGAGGCTCTAAAACCTACTGTACTTCCGGCGGTTCACGTGTCTTATCACGTTTATATGAAAAATCCCAGACCGCACTGGGGAATTTCATTTAGAAAGTGGTTTTTGTATGATTCTACTCTTAAAAGAAATCTGAAGATTTTAAATAGTGGGAAAATTAATCATCATGATATTCTTGATACACTTTTTTTCAAGAAGCTCCGTCAGGCTCTTGGTGGAAGAGTATGTATGATAGTTACAGGGGGTGCACCACTTTCATCAGAGCTGTTCAACTTCTTTCGAGCTGCTTTCAATGGTCTTATTGTCGTAGGTTACGGATCAACTGAAGTTTCTGGTGTAGCTAGTGCAA]
[+] EMBL CD081432 [ATTCGGTACGAGGACTCTGTTCACATTTCATATCTACCTTTTGCTCATATAATGGAGCAAGTTACTTCGTCTGCTGCTGTATTTTGTGGAGCACAAATCGGATTCCTTACTGGAGCAATCACTGGATTGTTAAATGATGCTGAGGCTCTAAAACCTACTGTACTTCCGGCGGTTCACGTGTCTTATCACGTTTATATGAAAAATCCCAGACCGCACTGGGGAATTTCATTTAGAAAGTGGTTTTTGTATGATTCTACTCTTAAAAGAAATCTGAAGATTTTAAATAGTGGGAAAATTAATCATCATGATATTCTTGATACACTTTTTTTCAAGAAGCTCCGTCAGGCTCTTGGTGGAAGAGTATGTATGATAGTTACAGGGGGTGCACCACTTTCATCAGAGCTGTTCAACTTCTTTCGAGCTGCTTTCAATGGTCTTATTGTCGTAGGTTACGGATCAACTGAAGTTTCTGGTGTAGCTAGTGCAA]
consensusID : consensus_10487#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 485 fasta sequence
[TCAGAGATAACAGAGGCGAGATATGTATTAAGGGGAAGCGGTGTACCAAAGGTTATTTCAAAGATCCTGAAAGTACAGTCCAAATTATTGATGTTGATGGTTGGTTACATACTGGTGACATTGGAGAATGGACTACTGTAAAATCTATCTACCTAAATGATAATCCATTTACTGTTGAAAATGGATTGTTAACTCCGACCATGAAAATATCACGTCAAAATGCCCGTCGACACTTTCAATCTATCGTTGAATCATTATATTTGGAAACATGTTTTGAAGGCCAATGCATAAGTAACAATTGTAATTAGTAGCTCAATTTGTCCCACTGCCATTGTTTACTATCTTATCCAAAAAATCACATCACATACGGCAATCATCCTGTTGTTCGTACATAAAAAAATACAGGGGCAGCACCCCGTCGTTATTTCTTTTTTCTACCACAATTATATTGTTTATTGACTTTTTTAATTCGTGCAAAACAATCC]
[-] EMBL CD073028 [TCAGAGATAACAGAGGCGAGATATGTATTAAGGGGAAGCGGTGTACCAAAGGTTATTTCAAAGATCCTGAAAGTACAGTCCAAATTATTGATGTTGATGGTTGGTTACATACTGGTGACATTGGAGAATGGACTACTGTAAAATCTATCTACCTAAATGATAATCCATTTACTGTTGAAAATGGATTGTTAACTCCGACCATGAAAATATCACGTCAAAATGCCCGTCGACACTTTCAATCTATCGTTGAATCATTATATTTGGAAACATGTTTTGAAGGCCAATGCATAAGTAACAATTGTAATTAGTAGCTCAATTTGTCCCACTGCCATTGTTTACTATCTTATCCAAAAAATCACATCACATACGGCAATCATCCTGTTGTTCGTACATAAAAAAATACAGGGGCAGCACCCCGTCGTTATTTCTTTTTTCTACCACAATTATATTGTTTATTGACTTTTTTAATTCGTGCAAAACAATCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10487#1 ------------------------------------------------------------
consensus_10487#2 CCTCGAGGCCAAAAATTCGGCACGAGGGTTGGTGCTATCACTTCCAGGATCGAAGTCAAA 60
consensus_10487#4 ------------------------------------------------------------
consensus_10487#0 ------------------------------------------------------------
consensus_10487#3 ------------------------------------------------------------
consensus_10487#1 ------------------------------------------------------------
consensus_10487#2 CTTGCTGATGTTCCAGATATGGATATTGTAGCTCTCAGAGATAACAGAGGCGAGATATGT 120
consensus_10487#4 ------------------------------------------------------------
consensus_10487#0 ------------------------------------------------------------
consensus_10487#3 ------------------------------------------------------------
consensus_10487#1 -------------------------------------------------------AGGCC 5
consensus_10487#2 ATTAAGGGGAAGCGGTGTACCAAAGGTTATTTCAAAGATCCTGAAAGTACAGTCCAAATT 180
consensus_10487#4 ------------------------------------------------------------
consensus_10487#0 ------------------------------------------------------------
consensus_10487#3 ------------------------------------------------------------
consensus_10487#1 AANAATTTGGCACGAGGGTCACATACTGGTGACATTGGAGAATGGACTACTGAGGGAGCT 65
consensus_10487#2 ATTGATGTTGATGGTTGGTTACATACTGGTGACATTGGAGAATGGACTACTGAGGGAGCT 240
consensus_10487#4 ------------------------------------------------------------
consensus_10487#0 -----------------GATCTATGCCTCATTTGTTATACCAGTGGCAGTACAGGCTTAG 43
consensus_10487#3 ------------------------------------------------------------
consensus_10487#1 TTGAAAATCGTTGATCGTGTTAAAAGTATCTTCAAGTTGGCACAGGGAGAATATGTAGCT 125
consensus_10487#2 TTGAAAATCGTTGATCGTGTTAAAAGTATCTTCAAGTTGGCACAGGGAGAATATGTAGCT 300
consensus_10487#4 ------------------------------------------------------------
consensus_10487#0 CCAAGGGTGTCATGATTAGTCATGAAAATTTGGTAGATACAATCTGCTCTACAATGGAGT 103
consensus_10487#3 ------------------------------------------------------------
consensus_10487#1 CCAGAAAAATTAGAACTGGTTTAT-AGGGCTGTCAACTTATAGATCAAATATTTGTTGAT 184
consensus_10487#2 CCAGAAAAATTAGAACTGGTTTATCAGGGCTGTCAACTTATAGATCAAATATTTGTTGAT 360
consensus_10487#4 ------------------------------------------------------------
consensus_10487#0 CTACGGAAGCAAAGTTGTATT-GTCGGAATTCTGTTCACATTTCATATCTACCTTTTGCT 162
consensus_10487#3 --------------ATTCGGT-ACGAGGACTCTGTTCACATTTCATATCTACCTTTTGCT 45
consensus_10487#1 GGAAAACCGGAACAAAATTTCCCTGTCGCTGTTGTCACTCCGAATTTCGTAAACTTACGT 244
consensus_10487#2 GGAAAACCGGAACAAAATTTCCCTGTCGCTGTTGTCACTCCGAATTTCGTAAACTTACGT 420
consensus_10487#4 ------------------------------------------------------------
consensus_10487#0 CATATAATGGAGCAAGTTACTTCGTCTGCTGCTGT-ATTTTGTGGAGCACAAA-TCGGAT 220
consensus_10487#3 CATATAATGGAGCAAGTTACTTCGTCTGCTGCTGT-ATTTTGTGGAGCACAAA-TCGGAT 103
consensus_10487#1 TCATGTATTAACTCTTACCTAAAATCTGGTTGTAATGTAGATGATGGGAAAATATTCGAT 304
consensus_10487#2 TCATGTATTAACTCTTACCTAAAATCTGGTTGTAATGTAGATGATGGGAAAATATTCGAT 480
consensus_10487#4 --------------TCAGAGATAACAGAGGCGAGATATGTATTAAGGGGAAG----CGGT 42
consensus_10487#0 TCCTTTACTGG-----AGCAATTACTGGATTGTTAGAT-GATGCTGAGGCTCTAAAACCT 274
consensus_10487#3 TCCTT-ACTGG-----AGCAATCACTGGATTGTTAAAT-GATGCTGAGGCTCTAAAACCT 156
* * * * * * ** * * *
consensus_10487#1 ATGAGACCATCAGATACTTTTCGATTATCTGACAACG-ATATTTGCAAAAGCATAGAA-- 361
consensus_10487#2 ATGAGACCATCAGATACTTTTCGATTATCTGACAACG-ATATTTGCAAAAGCATAGAA-- 537
consensus_10487#4 GT---ACCAAAGGTTA--TTTCAAAGATCCTGAAAGT-ACAGT--CCAAATTATTGAT-- 92
consensus_10487#0 ACTGTACTTCCGGCGG--TTCCACGTGTCTTATCACGTATATATGAAAAATACCAGAATG 332
consensus_10487#3 ACTGTACTTCCGGCGG--TTC-ACGTGTCTTATCACGTTTATATGAAAAATCCCAGACCG 213
** * ** ** * * *** **
consensus_10487#1 -ATCCGACGATTTGTTTTGCGAAAAA-----TGAATGAAGTCGCAACAGATAAGGGACTA 415
consensus_10487#2 -ATCCGACGATTTGTTTTGCGAAAAA-----TGAATGAAGTCGCAACAGATAAGGGACTA 591
consensus_10487#4 -GTT-GATGGTTGGTT-----ACATA-----CTGGTGA-----CATTGGAGAATGGACTA 135
consensus_10487#0 CACTTGGTAATT-CATTTATAAAAAGGTATCTGTATGAATATACTCTTAAAAGAAATCTG 391
consensus_10487#3 CACTGGGGAATTTCATTTAGAAAGTGGTTTTTGTATGATTCTACTCTTAAAAGAAATCTG 273
* ** * * *** * * * **
consensus_10487#1 AAAGGCTTTGA-AATGGTAAAATCTATCTACCTAAA--TGATAATCCATTTACTGTTGAA 472
consensus_10487#2 AAAGGCTTTGA-AATGGTAAAATCTATCTACCTAAA--TGATAATCCATTTACTGTTGAA 648
consensus_10487#4 --------------CTGTAAAATCTATCTACCTAAA--TGATAATCCATTTACTGTTGAA 179
consensus_10487#0 AAGATTTTAAATAGTGGGAAAATTAATCATCATGATATTCTTGATACACTT-TTTTTCAA 450
consensus_10487#3 AAGATTTTAAATAGTGGGAAAATTAATCATCATGATATTCTTGATACACTT-TTTTTCAA 332
* ***** *** * * * * * ** ** ** * ** **
consensus_10487#1 AATGGATTGTTAA-CTCCGACCATGAAAATATCACGTCAAAATGCCCGTCGACACTTTCA 531
consensus_10487#2 AATGGATTGTTAA-CTCCGACCATGAAAATATCACGTCAAAATGCCCGTCGACACTTTCA 707
consensus_10487#4 AATGGATTGTTAA-CTCCGACCATGAAAATATCACGTCAAAATGCCCGTCGACACTTTCA 238
consensus_10487#0 GAAGCTCCGTCAGGCTCTTGGTGGAAGAGTAT-GTATGATAGTTACAGGGGGTGCACCAC 509
consensus_10487#3 GAAGCTCCGTCAGGCTCTTGGTGGAAGAGTAT-GTATGATAGTTACAGGGGGTGCACCAC 391
* * ** * *** * * *** * * * * * * * *
consensus_10487#1 ATCTATCGTTGAATCATT--ATATTTGGAAACATGTTCTGAAGGCCAATGCATAAGTAAC 589
consensus_10487#2 ATCTATCNGTGAATCATTT-ATATTGGAAANCATGT-CTGAAGNNNCATGCATAGT--AC 763
consensus_10487#4 ATCTATCGTTGAATCATT--ATATTTGGAAACATGTTTTGAAGGCCAATGCATAAGTAAC 296
consensus_10487#0 TTTCATCA--GAGCTGTTCAACTTCTTTCGAGCTGCTTTCAATGGTCTTACTCG------ 561
consensus_10487#3 TTTCATCA--GAGCTGTTCAACTTCTTTCGAGCTGCTTTCAATGGTCTTA-TTG------ 442
* *** ** ** * * ** * ** *
consensus_10487#1 AATTGTAATTAGTAGCTCAATTTGTCCCACTGCCATTGTT--TACTATCTTTAGCCAAAA 647
consensus_10487#2 AATTGTA-TTAGTAGCTAAATTTGNCC-ACTGNCATTGNN--TACTATCTTNAGC-AAAA 818
consensus_10487#4 AATTGTAATTAGTAGCTCAATTTGTCCCACTGCCATTGTT--TACTATCTT-ATCCAAAA 353
consensus_10487#0 --CCGTAGGTTACGGATCAACTGAAGTTTCTGGTGTGGCTAGTGCAACTGTTCTAGGGGA 619
consensus_10487#3 --TCGTAGGTTACGGATCAACTGAAGTTTCTGGTGTAGCTAGTGCAA------------- 487
*** * * * ** * *** * * * * *
consensus_10487#1 AATCACATCACATACGGCAATCATCCTGTTGTTCGTACATAAAAAAATACAGGGGCAGCA 707
consensus_10487#2 AATC-CATNACATACGGCAATCATNCNNTGTGTCGTACATAAAAAT---CAGGGGCAGNA 874
consensus_10487#4 AATCACATCACATACGGCAATCATCCTGTTGTTCGTACATAAAAAAATACAGGGGCAGCA 413
consensus_10487#0 ATCTCATGAAGGTACTGNTGGTGCTATCACTTCCAGGATCGAAGTCAAACTTGCTGATGT 679
consensus_10487#3 ------------------------------------------------------------
consensus_10487#1 CCCCGTCGTTATTTCTTTTTTCTACCACAATTATATTGTTTATTGACTTTTTTAATTCGT 767
consensus_10487#2 CCCGNNCGTA---TTCTTTTTCTACCA--ATTTAATTGT--ATGGACTTTTTAAATCNGC 927
consensus_10487#4 CCCCGTCGTTATTTCTTTTTTCTACCACAATTATATTGTTTATTGACTTTTTTAATTCGT 473
consensus_10487#0 TCCAGATATGGATATTGTAGCTCTCAGAGATAACAGAGGCGAGATATGTATTAAGGGGAA 739
consensus_10487#3 ------------------------------------------------------------
consensus_10487#1 GCAAAACAATCCATATTATATATATTTCTCTTTTATTCAGTGTATCCTGGGTGAAAATTT 827
consensus_10487#2 NAAAT------------------------------------------------------- 932
consensus_10487#4 GCAAAACAATCC------------------------------------------------ 485
consensus_10487#0 GCGGTGTACCAAAGGTTATTTCAAAGATCCTGAAAGTACAGTCCAAATTATTGATGTTGA 799
consensus_10487#3 ------------------------------------------------------------
consensus_10487#1 ATCGTGAAACTCATTCCTATTTATTTATTTAAAATAATTTATATTTCTTCAATTGAAACA 887
consensus_10487#2 ------------------------------------------------------------
consensus_10487#4 ------------------------------------------------------------
consensus_10487#0 TGGTTGGTTACATACTGGTGACATTGGAGAATGGACTACTGTGACAGTTTAACTATGATG 859
consensus_10487#3 ------------------------------------------------------------
consensus_10487#1 GTAAATTACAAGAATGCAACCACGCAAGATAGATAGTGGGAATATAACAAACATTGTAAA 947
consensus_10487#2 ------------------------------------------------------------
consensus_10487#4 ------------------------------------------------------------
consensus_10487#0 CGAAAATTTCCGAAGCTATTTTTCTACGATTTTCTTTATATCTATTGATTGGATGTTTGA 919
consensus_10487#3 ------------------------------------------------------------
consensus_10487#1 GCGAAATATATTATACGTAATAAACTTGAAA----------------------------- 978
consensus_10487#2 ------------------------------------------------------------
consensus_10487#4 ------------------------------------------------------------
consensus_10487#0 TAAGTACTTTGGTTTTATTATTTTCGTATTACCCTAGTTCCAAGCTTTTGTTCGAACTGT 979
consensus_10487#3 ------------------------------------------------------------
consensus_10487#1 ------------------------------------------------------------
consensus_10487#2 ------------------------------------------------------------
consensus_10487#4 ------------------------------------------------------------
consensus_10487#0 AAATTGTTGATATACCATTTTCCACTCATAAACTAGAACCGATTATTTGTGCACCCAGTA 1039
consensus_10487#3 ------------------------------------------------------------
consensus_10487#1 ------------------------------------------------------------
consensus_10487#2 ------------------------------------------------------------
consensus_10487#4 ------------------------------------------------------------
consensus_10487#0 CTCCGTTTTTCTCATCATTAATGTTGTTGTTCCATGTTAATACCGTTACTCAGCTGGCCC 1099
consensus_10487#3 ------------------------------------------------------------
consensus_10487#1 ------------------------------------------------------------
consensus_10487#2 ------------------------------------------------------------
consensus_10487#4 ------------------------------------------------------------
consensus_10487#0 ACTGCGTGGTTTGGTCTTGTTTGTATATAAATGAATGTCTGAAATATAATAATGATCTTG 1159
consensus_10487#3 ------------------------------------------------------------
consensus_10487#1 ------------------------------------------------------------
consensus_10487#2 ------------------------------------------------------------
consensus_10487#4 ------------------------------------------------------------
consensus_10487#0 GACGGGTGATGATTGGTCTCGTGTTCTTCCTCTTCGTTCGGAGCTAGTTAGTATTGAGCC 1219
consensus_10487#3 ------------------------------------------------------------
consensus_10487#1 ------------------------------------------------------------
consensus_10487#2 ------------------------------------------------------------
consensus_10487#4 ------------------------------------------------------------
consensus_10487#0 AACCGTCAAGTATAGAGTACCAGTCTTCCTCCTGTTGGCTACGTTTTGGTTGATTATGGT 1279
consensus_10487#3 ------------------------------------------------------------
consensus_10487#1 ------------------------------
consensus_10487#2 ------------------------------
consensus_10487#4 ------------------------------
consensus_10487#0 TTTCTATGTTTATTGGTGGGTGGTAAGACA 1309
consensus_10487#3 ------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||