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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10489#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 680 fasta sequence
[CTTTGACCGTATCCGCCAAGGTCAACCCGGGCGGGCCCTGGA-GGTGTTCCGGA-TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG-CCAGCTGTTTTTCAATGCCGCGG--AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG-GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTG-AAGT-AGTTA-TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGACACCA]
[+] EMBL CD162454 [CTTTGACCGTATCCGCCAAGGTCAACCCGGGCGGGCCCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCA CCAGCCGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTG AAGT AGTTA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGACACCA]
[+] EMBL CD162415 [CTTTGACCGTATCCGCCAAGGTCAACCCGGGCGGGCCCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGC GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGA CAGGTGCGCGCATTGCTTG TAGTCAG TA TCGATGAACTGATGGCCGACGGCTTCNATCATTTCGATGGA ]
[+] EMBL CD162460 [CTTTGAACGTATCCGCCAAGGTCAACCCGGGCGGGCCCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCT GCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCGCAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGAGGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTN GAGT AGTTA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGA ]
[+] EMBL CD162426 [CTTTGACCGTATCCGCCAAGGTCAACCCGGGCGGGCCCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGTGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG NGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTGAAAGT AG TA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGA ]
[+] EMBL CD162458 [CTTTGACCGTATCCGCCAAGGTCAACCCGGGCGGGCCCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCGGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAACAGGTGCGCGCATTGCTTG GAGT AGTTATTCGA GAACTGATGGCCGA GGCTTCGATCATTTCGATGG ]
[+] EMBL CD162448 [CTTTGACCGTATCCGCCAAGGTCAACCCGGGCGGGCCCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG NGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTNGTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTGAAAGT AG TA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGA ]
[-] EMBL CD162431 [ TTTGACCGTATCCGCCAAGGTCAACCCGGGCGGGCCCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTG AAGT AGTTA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGAC ]
[-] EMBL CD162429 [ TTTGACCGTATCCGCCAAGGTCACCCCGGCGGGGNCCTGNA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTG AAGT AGTTA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGAC ]
[-] EMBL CD162412 [ TTTGACCGTATCCGCCAAGGTCACCCCGGGCGGGNCCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTG AAGT GGTTA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGAC ]
[-] EMBL CD162451 [ TTTGACCGTATCNGCCAAGGTCACCCCGGGCGGG CCTGGANGGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTG ACATGGCGCGCCCAGCTG TTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCGGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTG AAGT AGTTA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGAC ]
[-] EMBL CD162428 [ TTTGACNGTATCCGCCAAGGTCANCCCGGCGGGGNCCTGNA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTG TTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTG AAGT AGTTA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGAC ]
[-] EMBL CD162436 [ TTTGACNGTATCCGCCAAGGTCAACCCGGGCGGGNCCTGNA GGTGTT CGGATTCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTG TTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGGGCAGGTGCGCGCATTGCTTG AAGT AGTTA TCGAGGAACTGATGGCCGACGGCTTCGACCATTTCGATGGAC ]
[+] EMBL CD162416 [ TGACCGTATCCGCCAAGGTCAACCCGGGCGGG CCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTGAAAGT AG TA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGA ]
[+] EMBL CD162425 [ TGACCGTATCCGCCAAGGTCAACCCGGGCGGG CCTGGA GGTGTTCCGGA TCTGGCGCAGCGAGATCAGCCTGAACATGGCGCG CCAGCTGTTTTTC ATGCC CGGACAACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCcac ]
[+] EMBL CD162439 [ CCTGAACATGGCGCG CCAACTGTTGTTCAATGCCGCGG AACGCGAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGG GGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTG AAGT AGTTA TCGAGGAACTGATGGCCGACGGCTTCGATCATTTCGATGGA ]
[+] EMBL CD162465 [ CGGGG AACGCNAAGCCGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACANGCGCAGGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGGNGAAAGATAT ACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCANCANCATCAGCCCATCGCTCTTGAGCA GTGCGCGCATTGCCTG AAGT AGTTA TCGAGGAACTGATGGCCGACGGCTTCAATCATTTCGATGa ]
consensusID : consensus_10489#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 563 fasta sequence
[GCGCCTTAATACAAGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCATGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCAGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGGGGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCANCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTGAAGTATTATCGAGGAACTGATGGCNGACGGCTTCGATCATTTCGATG]
[+] EMBL CD162411 [GCGCCTTAATACAAGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGCCATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCTGGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCACAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCCGTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCATGGTGCGCGCGTAGTGCAGGCCGAAGTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCAGCTGACCACCTCGAGCATCTTCTGCACGCTGGGCAGGGCGCCACCGGGGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCTGGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCANCAGCATCAGCCCATCGCTCTTGAGCAGGTGCGCGCATTGCTTGAAGTATTATCGAGGAACTGATGGCNGACGGCTTCGATCATTTCGATG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10489#0 CTTTGACCGTATCCGCCAAGGTCAACCCGGGCGGGCCCTGGAGGTGTTCCGGATCTGGCG 60
consensus_10489#1 ------------------------------------------------------------
consensus_10489#0 CAGCGAGATCAGCCTGAACATGGCGCGCCAGCTGTTTTTCAATGCCGCGGAACGCGAAGC 120
consensus_10489#1 -------------------------------------------------GCGCCTTAATA 11
* * **
consensus_10489#0 CGTGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGC 180
consensus_10489#1 CAAGGTGCGTGAACAACTGCGCCAGCTTTAGTTGATCCGGACCGGGGCGCGGCCAACCGC 71
* *********************************************************
consensus_10489#0 CATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCT 240
consensus_10489#1 CATTCGGGAAACCTAACTATCGAAGCGCCCGAGCAGCGGCTGCGTTCGGGCTGTCGGCCT 131
************************************************************
consensus_10489#0 GGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCA 300
consensus_10489#1 GGCCAGCAGCAGCTGCGCGGTGCCGATGCTGCGTTCGAGGAAACCGCCTTCGCAGTAGCA 191
************************************************************
consensus_10489#0 CAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCC 360
consensus_10489#1 CAGGTAGAACTCCCACAAACGCAGGAAATAATCGTCGTAGCCCAGTTCGCTCAGGCGCCC 251
************************************************************
consensus_10489#0 GTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCAGGGTGCGCGCGTAGTGCAGGCCGAA 420
consensus_10489#1 GTGGGCACGGCGGAAGTTCTCGTGCCACAGGCGCATGGTGCGCGCGTAGTGCAGGCCGAA 311
*********************************** ************************
consensus_10489#0 GTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCGGCTGACCACCTCGAGCATCTTCTG 480
consensus_10489#1 GTCCTCCATGTGCAGCAGGTTCATGTCGGTTTCGCAGCTGACCACCTCGAGCATCTTCTG 371
*********************************** ************************
consensus_10489#0 CACGCTGGGCAGGGCGCCACCGGGGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCT 540
consensus_10489#1 CACGCTGGGCAGGGCGCCACCGGGGAAGATATAACGCTGGATAAAGTCGACCGTGCTCCT 431
************************************************************
consensus_10489#0 GGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCAGCAGCATCAGCCCATCGCT 600
consensus_10489#1 GGCCTGCTCATAACGTTGTTCGCGGATGGTGATGGCCTGCANCAGCATCAGCCCATCGCT 491
***************************************** ******************
consensus_10489#0 CTTGAGCAGGTGCGCGCATTGCTTGAAGTAGTTATCGAGGAACTGATGGCCGACGGCTTC 660
consensus_10489#1 CTTGAGCAGGTGCGCGCATTGCTTGAAGTA-TTATCGAGGAACTGATGGCNGACGGCTTC 550
****************************** ******************* *********
consensus_10489#0 GATCATTTCGATGGACACCA 680
consensus_10489#1 GATCATTTCGATG------- 563
*************
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||