cluster # 10491

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10491 cluster # 10491 Sequences # 17 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10491#0 length = 1061 sequences # 7
consensus_10491#1 length = 838 sequences # 7

consensus_10491#2 length = 414 sequences # 1
consensus_10491#3 length = 291 sequences # 1
consensus_10491#4 length = 219 sequences # 1

consensusID : consensus_10491#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1061
fasta sequence

                              [GATATTTATTTGTAAATAAAAGACTTGCACTTGTTATTGTATTGCAAAAGTGAAGTGCATTTAATTAATTGGAAGATTTAACTGTTTGTTATCATTTCCAATAGTCACCAGAAACACTCCCAAATATAAAAAAAGCAATGACAAAAGAATAATATAAGCCAAACACACCGTACACAAGTTAATAATAAATAGCTTCATCACAAAGAAAAGGTCATGTAAATTCTGATCAAATAATTAAATGACTGAAAGTCAACAAAATAGTTATTATTAGATGTACTTCATTTATTCATTGGCAGGCATGTAACCAAAATTAAATAATGCCAGTACTTGAATTTGTTTGATTTCATCAGCTGGAGGTAAAACACGTTGTTCTAATGTTGTAGAGGCAGTGGTAGTTGTTGCTGACAATATTGAAGTTTCAGCGGTGACAGTTGTTTCTGGGATCTTTTCTTGTATCTTGGTAGGGTCAGTTGCCGCTGTCTTATTACTCGCTGCACTTAACAGAGTAGTTGGTGTGTTTTTGTAGTCGAAATTCATGTAAATTGCAGCTTGTAAAGGGATCAGTTGTTCAGATTTGTGAAATTGATCAATTATTTGATCTTCGCTAACTGGAACTAAACTTGAACTTTGTAGTGTCAGTAACTTGTTGGTTTTTGGTATTAAAGTAACATTAATACCTAGTTTGTTACCACGACGGAAGGCCACTATCTTAGGATCATCTTTGTAATCGCCAGAACTCTGACCCCCCGTCTGGACGGGGGATCAGGTGGATCGTCTACCACTACACCACAGACTATTGGCCCAATGCAAACCACACACGCAACCGCCGACGTGACAAAACCAAGCCATCAGCCGACCAGCCGAAGCTAGTAACAAACCGACCACACTCAGCAATGCCCGAAGGTCTAAGCACGCATGCGAAGCCGTCATCTCCGACACACCGGACAGATCCACTACAGCCAGTTAGTAACACTCACGGGCCATAAATGAGCCAAAGAACCCCCGTCAATTACAATACCATATTTAACACGGGATTCGTTATTCAGGCGCATTATCGGCGG]

[+] EMBL CD076108             [GATATTTATTTGTAAATAAAAGACTTGCACTTGTTATTGTATTGCAAAAGTGAAGTGCATTTAATTAATTGGAAGATTTAACTGTTTGTTATCATTTCCAATAGTCACCAGAAACACTCCCAAATATAAAAAAAGCAATGACAAAAGAATAATATAAGCCAAACACACCGTACACAAGTTAATAATAAATAGCTTCATCACAAAGAAAAGGTCATGTAAATTCTGATCAAATAATTAAATGACTGAAAGTCAACAAAATAGTTATTATTAGATGTACTTCATTTATTCATTGGCAGGCATGTAACCAAAATTAAATAATGCCAGTACTTGAATTTGTTTGATTTCATCAGCTGGAGGTAAAACACGTTGTTCTAATGTTGTAGAGGCAGTGGTAGTTGTTGCTGACAATATTGAAGTTTCAGCGGTGACAGTTGTTTCTGGGATCTTTTCTTGTATCTTGGTAGGGTCAGTTGCCGCTGTCTTATTACTCGCTGCACTTAACAGAGTAGTTGGTGTGTTTTTGTAGTCGAAATTCATGTAAATTGCAGCTTGTAAAGGGATCAGTTGTTCAGATTTGTGAAATTGATCAATTATTTGATCTTCGCTAACTGGAACTAAACTTGAACTTTGTAGTGTCAGTAACTTGTTGGTTTTTGGTATTAAAGTAACATTA                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD074629             [                                         TTGCAAAAGTGAAGTGCATTTAATTAATTGGAAGATTTAACTGTTTGTTATCATTTCCAATAGTCACCAGAAACACTCCCAAATATAAAAAAAGCAATGACAAAAGAATAATATAAGCCAAACACACCGTACACAAGTTAATAATAAATAGCTTCATCACAAAGAAAAGGTCATGTAAATTCTGATCAAATAATTAAATGACTGAAAGTCAACAAAATAGTTATTATTAGATGTACTTCATTTATTCATTGGCAGGCATGTAACCAAAATTAAATAATGCCAGTACTTGAATTTGTTTGATTTCATCAGCTGGAGGTAAAACACGTTGTTCTAATGTTGTAGAGGCAGTGGTAGTTGTTGCTGACAATATTGAAGTTTCAGCGGTGACAGTTGTTTCTGGGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD144706             [                                                                                                                                                                                                                                                                                                                                                                                                                   GACAATATTGAAGTTTCAGCGGTGACAGTTGTTTCTGGGATCTTTTCTTGTATCTTGGTAGGGTCAGTTGCCGCTGTCTTATTACTCGCTGCACTTAACAGAGTAGTTGGTGTGTTTTTGTAGTCGAAATTCATGTAAATTGCAGCTTGTAAAGGGATCAGTTGTTCAGATTTGTGAAATTGATCAATTATTCGATCTTCGCTAACTGGAACTAAACTTGAACTTTGTAGTGTCAGTAACTTGTTGGTTTTTGGTATTAAAGTAACATTAATA                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BG931062             [                                                                                                                                                                                                                                                                                                                                                                                                                                                          gTCTTTTCTTGTATCTTGGTAGGGTCAGTTGCCGCTGTCTTATTACTCGCTGCACTTAACAGAGTAGTTGGTGTGTTTTTGTAGTCGAAATTCATGTAAATTGCAGCTTGTAAAGGGATCAGTTGTTCAGATTTGTGAAATTGATCAATTATTTGATCTTCGCTAACTGGAACTAAACTTGAACTTTGTAGTGTCAGTAACTTGTTGGTTTTTGGTATTAAAGTAACATTAATACCTAGTTTGTTACCACGACGGAAGGCCACTATCTTAGGATCATCTTTGTAATCGCCAGAACTCTGACCCCCCGTCTGGACGGGGGGTCAGGTGGATCGTCTACCACTACACCACAGGCTATTGGCCCAATGCAAACCACACACGCAACCGCCGACGTGACAA                                                                                                                                                                                                                               ]
[+] EMBL BG930623             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATCATGTGGATCGTCTACCACTACACCACAGATTATTGGCCCAATGCATACCACACACGCAACCGACGACGTGACAAAACCAAGCCATCAGCCGACCAGCCGAAGCTAGTTACAAACCGACCACACTCAGCAATGCCCGAAGGTCTAAGCACGCATGCGAAGCCGTCATCTCCGACACACCGTACAGATCCACTACAGCCAGTTTGTAACACTTACGGGCCATAAATGAGCCAAAGACCCTTCGTTAATTACAATACCATATTTAACACTGGATTCGTTATTCA                ]
[+] EMBL BG930163             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATCAGGTGGATCGTCTACCACTACACCACAGACTATTGGCCCAATGCAAACCACACACGCAACCGCCGACGTGACAAAACCAAGCCATCAGCCGACCAGCCGAAGCTAGTAACAAACCGACCACACTCAGCAATGCCCGAAGGTCTAAGCACGCATGCGAAGGCGTCATCTCCGACACACCTGACAGATCCACTACAGCCAGTTAGTAACACTCACGGTCCATAAATGAGCCAAAGAACCCCCGTCTATTACAAGACCATATTTAACACGGGAATCCCTGGAAAGGCGCATTATCGGCGG]
[+] EMBL BG930294             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  gTCGTCTACCACTACACCACAGATTATTGGCCCAATGCAAACCACACACGCAACCGTCGACGTGACAAAACCAAGCCATCAGCCGACCAGCCGAAGCTAGTAACAAACCGACCACACTCAGCAATGCCCGAAGGTCTAAGCACGCATGCGAAGCCGCCATCTCCGACACACCGCACAGATCCACTACAGCCAGTTAGTAACACTCACGGCCCATAAATGAGCCATAGAGCCCCCATGCATCAC ATACCATATTTAACACG                              ]




>consensus_10491#0
GATATTTATTTGTAAATAAAAGACTTGCACTTGTTATTGTATTGCAAAAGTGAAGTGCAT
TTAATTAATTGGAAGATTTAACTGTTTGTTATCATTTCCAATAGTCACCAGAAACACTCC
CAAATATAAAAAAAGCAATGACAAAAGAATAATATAAGCCAAACACACCGTACACAAGTT
AATAATAAATAGCTTCATCACAAAGAAAAGGTCATGTAAATTCTGATCAAATAATTAAAT
GACTGAAAGTCAACAAAATAGTTATTATTAGATGTACTTCATTTATTCATTGGCAGGCAT
GTAACCAAAATTAAATAATGCCAGTACTTGAATTTGTTTGATTTCATCAGCTGGAGGTAA
AACACGTTGTTCTAATGTTGTAGAGGCAGTGGTAGTTGTTGCTGACAATATTGAAGTTTC
AGCGGTGACAGTTGTTTCTGGGATCTTTTCTTGTATCTTGGTAGGGTCAGTTGCCGCTGT
CTTATTACTCGCTGCACTTAACAGAGTAGTTGGTGTGTTTTTGTAGTCGAAATTCATGTA
AATTGCAGCTTGTAAAGGGATCAGTTGTTCAGATTTGTGAAATTGATCAATTATTTGATC
TTCGCTAACTGGAACTAAACTTGAACTTTGTAGTGTCAGTAACTTGTTGGTTTTTGGTAT
TAAAGTAACATTAATACCTAGTTTGTTACCACGACGGAAGGCCACTATCTTAGGATCATC
TTTGTAATCGCCAGAACTCTGACCCCCCGTCTGGACGGGGGATCAGGTGGATCGTCTACC
ACTACACCACAGACTATTGGCCCAATGCAAACCACACACGCAACCGCCGACGTGACAAAA
CCAAGCCATCAGCCGACCAGCCGAAGCTAGTAACAAACCGACCACACTCAGCAATGCCCG
AAGGTCTAAGCACGCATGCGAAGCCGTCATCTCCGACACACCGGACAGATCCACTACAGC
CAGTTAGTAACACTCACGGGCCATAAATGAGCCAAAGAACCCCCGTCAATTACAATACCA
TATTTAACACGGGATTCGTTATTCAGGCGCATTATCGGCGG

consensusID : consensus_10491#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 838
fasta sequence

                              [TCGAGGGCCAGAATTCGGCACGAGGCGTTACTTAGTTGCACATGCCAAAAAATGCCAGAAAACGACGCAGTGAGACTATACATTTTGCTTGACCAGGCCTCACTAGAGTCAGTGAAGGCGTCTAGTGGAAAAGAGTTTCAACTGCTTAATCCTGACAGACATAAAGATCGGATTTTAAAGGCCGGTGTTGATGTAGCCACAGTTCGTCCAGATATTACTCATCAATGTCTACTTATGCTACTTGATAGCCCACTAAACCGAGTTGGTAAACTACAGGTTTTTATTCGAACAAGAAAAAATGTGATAATTGAAGTGAACCCTAAAACAAGGGTACCACGTACGTTTGATCGATTTTGTGGACTTATGGTACAACTTTTACACAAACTCTCAATACATGCTGAAGGTGGCAACCGTGAAAAACTATTAAAGGTCGTCAAAAACCCTGTAACACGACACTTTCCAATTGGTGCTCCAGTAATTACAATGTCGTTTTCATCAAAGGAACAAATTAAACCACTTCAACTAGCTGAAGAGACACAGAAGCCTAATCCTCAATCAGTTGTCATTGTTATTGGTGCATTAGCTCATGGTTCAGTTGTCGATACTTGTAAAGAGTTTATACAACGTACAGTCAGTATTAGCAACTTCCCTTTATCGGCCGCCCAGACATGCGCTCGAATATGTACTGCATTTG-AGAAGTA-TGGTGTGTTGAAGATATTTTAAATGGAG-AAAAACGC-AGTAGAAACCTGATACGTT-ACAT-ACAGTGATAT-TATGATATTTATTTGT-AAT-AAAGACTTGCACTTG-TATTTGATTGCAAAAGTG-AGTGCATTT-ATTAATT]

[+] EMBL CD080680             [TCGAGGGCCAGAATTCGGCACGAGGCGTTACTTAGTTGCACATGCCAAAAAATGCCAGAAAACGACGCAGTGAGACTATACATTTTGCTTGACCAGGCCTCACTAGAGTCAGTGAAGGCGTCTAGTGGAAAAGAGTTTCAACTGCTTAATCCTGACAGACATAAAGATCGGATTTTAAAGGCCGGTGTTGATGTAGCCACAGTTCGTCCAGATATTACTCATCAATGTCTACTTATGCTACTTGATAGCCCACTAAACCGAGTTGGTAAACTACAGGTTTTTATTCGAACAAGAAAAAATGTGATAATTGAAGTGAACCCTAAAACAAGGGTACCACGTACGTTTGATCGATTTTGTGGACTTATGGTACAACTTTTACACAAACTCTCAATACATGCTGAAGGTGGCAACCGTGAAAAACTATTAAAGGTCGTCAAAAACCCTGTAACACGACACTTTCCAATTGGTGCTCCAGTAATTACAATGTCGTTTTCATCANAGGAACAAATTANACCACTTCAACTAGCTGAAGAGACACAGAAGCCTAATCCTCAATCAGTTGTCATTGGTATTGGTGCATTAGCTCATGGTTCAGTTGTCGATACTTGTAAAGAAGTTATAC ACGTACAGTCAGTATTAGCAACTT CCTTTATCGGCCCGCCA ACATGCGCTCGAATATG ACTGCATTGG AG AGTATTGGGGTG TG AGAT TTTTTAATGGA  AAAAACCC AGTA AAA CTGAT CGTA AC T TCAGGGAT T GTTGA ATTTA TTGT AAT AAAAAC TGC C TG T TTTGTTTGC AAAGT  AAAGCCTTT AT     ]
[+] EMBL CD080398             [              TCGGCACGAGGCGTTACTTAGTTGCACATGCCAAAAAATGCCAGAAAACGACGCAGTGAGACTATACATTTTGCTTGACCAGGCCTCACTAGAGTCAGTGAAGGCGTCTAGTGGAAAAGAGTTTCAACTGCTTAATCCTGACAGACATAAAGATCGGATTTTAAAGGCCGGTGTTGATGTAGCCACAGTTCGTCCAGATATTACTCATCAATGTCTACTTATGCTACTTGATAGCCCACTAAACCGAGTTGGTAAACTACAGGTTTTTATTCGAACAAGAAAAAATGTGATAATTGAAGTGAACCCTAAAACAAGGGTACCACGTACGTTTGATCGATTTTGTGGACTTATGGTACAACTTTTACACAAACTCTCAATACATGCTGAAGGTGGCAACCGTGAAAAACTATTAAAGGTCGTCAAAAACCCTGTAACACGACACTTTCCAATTGGTGCTCCAGTAATTACAATGTCGTTTTCATCAAAGGAACAAATTAAACCACTTCAACTAGCTGAAGAGACACAGAAGCCTAATCCTCAATCAGTTGTCATTGTTATTGGTGCATTAGCTCATGGTTCAGTTGTCGATACTTGTAAAGAGTTTATACAACGTACAGTCAGTATTAGCAACTTCCCTTTATCGGCCGCCCAGACATGCGCTCGAATATGTACTGCATTTG AGAAGTA TGGTGTGTTGAAGATATTTTAAATGGAG AAAAACGC AGTAGAAACCTGATACGTT ACAT ACAGTGATAT TATGATATTTATTTGT AAT AAAGACTTGCACTTG TATTTGATTGCANAAGTG AGTGCATTT ATTA   ]
[+] EMBL AI975248             [                                                                                   TTTGCTTGACCAGGCCTCACTAGAGTCAGTGAAGGCGTCTAGTGGAAAAGAGTTTCAACTGCTTAATCCTGACAGACATAAAGATCGGATTTTAAAGGCCGGTGTTGATGTAGCCACAGTTCGTCCAGATATTACTCATCAATGTCTACTTATGCTACTTGATAGCCCACTAAACCGAGTTGGTAAACTACAGGTTTTTATTCGAACAAGAAAAAATGTGATAATTGAAGTGAACCCTAAAACAAGGATACCACGTACGTTTGATCGATTTTGTGGACTTATGGTACAACTTTTACACAAACTCTCAATACATGCTGAAGGTGGCAACCGTGAAAAACTATTAAAGGTCGTCAAAAACCCTGTAACACGACACTTTCCAATTGGTGCTCCAGTAATTACAATGTCGTTTTCATCAAAGGAACAAATTAAACCACTTCAACTAGCTGAAGAGACACAGAAGCCTAATCCTTCATCAGTTGTC                                                                                                                                                                                                                                                                                              ]
[+] EMBL AI977077             [                                                                                   TTTGCTTGACCAGGCCTCACTAGAGTCAGTGAAGGCGTCTAGTGGAAAAGAGTTTCAACTGCTTAATCCTGACAGACATAAAGATCGGATTTTAAAGGCCGGTGTTGATGTAGCCACAGTTCGTCCAGATATTACTCATCAATGTCTACTTATGCTACTTGATAGCCCACTAAACCGAGTTGGTAAACTACAGGTTTTTATTCGAACAAGAAAAAATGTGATAATTGAAGTGAACCCTAAAACAAGGATACCACGTACGTTTGATCGATTTTGTGGACTTATGGTACAACTTTTACACAAACTCTCAATACATACTGAAGGTGGCAACCGTGAAAAACTATTAAAGGTCGTCAAAAACCCTGTAACACGACACTTTCCAATTGGTGCTCCAGTAATTACAATGTCGTTTTCATCAAAGGAACAGATTAAACCACTTCAACTAGCTGAAGAGACACAGAAGCCTAAT                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD074604             [                                                                                                                                                                         GGA TTTAAAGGCCGGTGTTGATGTAGCCACAGTTCGTCCAGATATTACTCATCAATGTCTACTTATGCTACTTGATAGCCCACTAAACCGAGTTGGTAAACTACAGGTTTTTATTCGAACAAGAAAAAATGTGATAATTGAAGTGAACCCTAAAACAAGGGTACCACGTACGTTTGATCGATTTTGTGGACTTATGGTACAACTTTTACACAAACTCTCAATACATGCTGAAGGTGGCAACCGTGAAAAACTATTAAAGGTCGTCAAAAACCCTGTAACACGACACTTTCCAATTGGTGCTCCAGTAATTACAATGTCGTTTTCATCAAAGGAACAAATTAAACCACTTCAACTAGCTGAAGAGACACAGAAGCCTAATCCTCAATCAGTTGTCATTGTTATTGGTGCATTAGCTCATGGTTCAGTTGTCGATACTTGTAAAGAGTTTATACAACGTACAGTCAGTATTAGCAACTTCCCTTTATCGGCCGCCCAGACATGCGCTCGAATATGTACTGCATTTGAAGAAGTA TGGTGTGTTGAAGATATTTTAAATGGAGAAAAAACGCAAGTAGAAACCTGATACGTTAACATAACAGTGATATGTATGATATTTATTTGTAAATAAAAGACTTGCACTTGTTATTGTATTGCAAAAGTGAAGTGCATTTAATTAATT]
[-] EMBL CD074313             [                                                                                                                                                                                                          TTCGTCCAGATATTACTCATCAATGTCTACTTATGCTACTTGATAGCCCACTAAACCGAGTTGGTAAACTACAGGTTTTTATTCGAACAAGAAAAAATGTGATAATTGAAGTGAACCCTAAAACAAGGGTACCACGTACGTTTGATCGATTTTGTGGACTTATGGTACAACTTTTACACAAACTCTCAATACATGCTGAAGGTGGCAACCGTGAAAAACTATTAAAGGTCGTCAAAAACCCTGTAACACGACACTTTCCAATTGGTGCTCCAGTAATTACAATGTCGTTTTCATCAAAGGAACAAATTAAACCACTTCAACTAGCTGAAGAGACACAGAAGCCTAATCCTCAATCAGTTGTCATTGTTATTGGTGCATTAGCTCATGGTTCAGTTGTCGATACTTGTAAAGAGTTTATACAACGTACAGTCAGTATTAGCAACTTCCCTTTATCGGCCGCCCAGACATGCGCTCGAATATGTACTGCATTTGAAGAAGTA TGGTGTGTTGAAGATATTTTAAATGGAGAAAAAACGCAAGTAGAAACCTGATACGTTAACATAACAGTGATATGTATGATATTTATTTGTAAATAAAAGACTTGCACTTGTTATTGTATTGCAAAAGTGAAGTGCATTTAATTAATT]
[-] EMBL CD141996             [                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACCCTGTAACACGACACTTTCCAATTGGTGCTCCAGTAATTACAATGTCGTTTTCATCAAAGGAACAAATTAAACCACTTCAACTAGCTGAAGAGACACAGAAGCCTAATCCTCAATCAGTTGTCATTGTTATTGGTGCATTAGCTCATGGTTCAGTTGTCGATACTTGTAAAGAGTTTATACAACGTACAGTCAGTATTAGCAACTTCCCTT                                                                                                                                                                                                      ]




>consensus_10491#1
TCGAGGGCCAGAATTCGGCACGAGGCGTTACTTAGTTGCACATGCCAAAAAATGCCAGAA
AACGACGCAGTGAGACTATACATTTTGCTTGACCAGGCCTCACTAGAGTCAGTGAAGGCG
TCTAGTGGAAAAGAGTTTCAACTGCTTAATCCTGACAGACATAAAGATCGGATTTTAAAG
GCCGGTGTTGATGTAGCCACAGTTCGTCCAGATATTACTCATCAATGTCTACTTATGCTA
CTTGATAGCCCACTAAACCGAGTTGGTAAACTACAGGTTTTTATTCGAACAAGAAAAAAT
GTGATAATTGAAGTGAACCCTAAAACAAGGGTACCACGTACGTTTGATCGATTTTGTGGA
CTTATGGTACAACTTTTACACAAACTCTCAATACATGCTGAAGGTGGCAACCGTGAAAAA
CTATTAAAGGTCGTCAAAAACCCTGTAACACGACACTTTCCAATTGGTGCTCCAGTAATT
ACAATGTCGTTTTCATCAAAGGAACAAATTAAACCACTTCAACTAGCTGAAGAGACACAG
AAGCCTAATCCTCAATCAGTTGTCATTGTTATTGGTGCATTAGCTCATGGTTCAGTTGTC
GATACTTGTAAAGAGTTTATACAACGTACAGTCAGTATTAGCAACTTCCCTTTATCGGCC
GCCCAGACATGCGCTCGAATATGTACTGCATTTGAGAAGTATGGTGTGTTGAAGATATTT
TAAATGGAGAAAAACGCAGTAGAAACCTGATACGTTACATACAGTGATATTATGATATTT
ATTTGTAATAAAGACTTGCACTTGTATTTGATTGCAAAAGTGAGTGCATTTATTAATT

consensusID : consensus_10491#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 414
fasta sequence

                              [TGCAAAAGTGAAGTGCATTTAATTAATTGGAAGATTTAACTGTTTGTTATCATTTCCAATAGTCACCAGAAACACTCCCAAATATAAAAAAAGCAATGACAAAAGAATAATATAAGCCAAACACACCGTACACAAGTTAATAATAAATAGCTTCATCACAAAGAAAAGGTCATGTAAATTCTGATCAAATAATTAAATGACTGAAAGTCAACAAAATAGTTATTATTAGATGTACTTCATTTATTCATTGGCAGGCATGTAACCAAAATTAAATAATGCCAGTACTTGAATTTGTTTGATTTCATCAGCTGGAGGTAAAACACGTTGTTCTAATGTTGTAGAGGCAGTGGTAGTTGTTGCTGACAATATTAAAGTTTCAGCGGTGACAGTTGTTTCTGGGATGTCCTCGTACCA]

[-] EMBL CD080704             [TGCAAAAGTGAAGTGCATTTAATTAATTGGAAGATTTAACTGTTTGTTATCATTTCCAATAGTCACCAGAAACACTCCCAAATATAAAAAAAGCAATGACAAAAGAATAATATAAGCCAAACACACCGTACACAAGTTAATAATAAATAGCTTCATCACAAAGAAAAGGTCATGTAAATTCTGATCAAATAATTAAATGACTGAAAGTCAACAAAATAGTTATTATTAGATGTACTTCATTTATTCATTGGCAGGCATGTAACCAAAATTAAATAATGCCAGTACTTGAATTTGTTTGATTTCATCAGCTGGAGGTAAAACACGTTGTTCTAATGTTGTAGAGGCAGTGGTAGTTGTTGCTGACAATATTAAAGTTTCAGCGGTGACAGTTGTTTCTGGGATGTCCTCGTACCA]




>consensus_10491#2
TGCAAAAGTGAAGTGCATTTAATTAATTGGAAGATTTAACTGTTTGTTATCATTTCCAAT
AGTCACCAGAAACACTCCCAAATATAAAAAAAGCAATGACAAAAGAATAATATAAGCCAA
ACACACCGTACACAAGTTAATAATAAATAGCTTCATCACAAAGAAAAGGTCATGTAAATT
CTGATCAAATAATTAAATGACTGAAAGTCAACAAAATAGTTATTATTAGATGTACTTCAT
TTATTCATTGGCAGGCATGTAACCAAAATTAAATAATGCCAGTACTTGAATTTGTTTGAT
TTCATCAGCTGGAGGTAAAACACGTTGTTCTAATGTTGTAGAGGCAGTGGTAGTTGTTGC
TGACAATATTAAAGTTTCAGCGGTGACAGTTGTTTCTGGGATGTCCTCGTACCA

consensusID : consensus_10491#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 291
fasta sequence

                              [ATGGATTGGAAGACGGGGGTCAGGTGGATCGTCTACCACTACACCACAGATTATTGGCCCAATGCAAACCACACACGCAACCGCCGACGTGACAAAACCAAGCCATCAGCCGACCAGCCGAAGCTAGTAACAAACCGATCACACTCAGAATGCCCGAAGGTCTAAGCACGCATGCGAAGCGCATCTCGACACACCGACAGATCCACTACAGCCAGTAGTAACACTCCGGCCATAATGAGCCAAAGACCCTAATCCATACAATACCATATTTACACGAATTCATATCAAGCT]

[+] EMBL BG930303             [ATGGATTGGAAGACGGGGGTCAGGTGGATCGTCTACCACTACACCACAGATTATTGGCCCAATGCAAACCACACACGCAACCGCCGACGTGACAAAACCAAGCCATCAGCCGACCAGCCGAAGCTAGTAACAAACCGATCACACTCAGAATGCCCGAAGGTCTAAGCACGCATGCGAAGCGCATCTCGACACACCGACAGATCCACTACAGCCAGTAGTAACACTCCGGCCATAATGAGCCAAAGACCCTAATCCATACAATACCATATTTACACGAATTCATATCAAGCT]




>consensus_10491#3
ATGGATTGGAAGACGGGGGTCAGGTGGATCGTCTACCACTACACCACAGATTATTGGCCC
AATGCAAACCACACACGCAACCGCCGACGTGACAAAACCAAGCCATCAGCCGACCAGCCG
AAGCTAGTAACAAACCGATCACACTCAGAATGCCCGAAGGTCTAAGCACGCATGCGAAGC
GCATCTCGACACACCGACAGATCCACTACAGCCAGTAGTAACACTCCGGCCATAATGAGC
CAAAGACCCTAATCCATACAATACCATATTTACACGAATTCATATCAAGCT

consensusID : consensus_10491#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 219
fasta sequence

                              [CTGGCATGCTAACTAGTTACGCGATCCAGCGTCAGATGGGGGGTCAGGTGGATCGTCTACCACTACACCACAGACTATTGGCCCAATGCAAACCACACACGCAACCGCCGACGTGACAAAACCAAGCCATCAGCCGACCAGCCGAAGCTAGTAACAAACCGACCACACTCAGCAATGCCCGAAGGTCTAAGCACGCATGCGAAGCCGCCATCTCCGACA]

[+] EMBL BG930849             [CTGGCATGCTAACTAGTTACGCGATCCAGCGTCAGATGGGGGGTCAGGTGGATCGTCTACCACTACACCACAGACTATTGGCCCAATGCAAACCACACACGCAACCGCCGACGTGACAAAACCAAGCCATCAGCCGACCAGCCGAAGCTAGTAACAAACCGACCACACTCAGCAATGCCCGAAGGTCTAAGCACGCATGCGAAGCCGCCATCTCCGACA]




>consensus_10491#4
CTGGCATGCTAACTAGTTACGCGATCCAGCGTCAGATGGGGGGTCAGGTGGATCGTCTAC
CACTACACCACAGACTATTGGCCCAATGCAAACCACACACGCAACCGCCGACGTGACAAA
ACCAAGCCATCAGCCGACCAGCCGAAGCTAGTAACAAACCGACCACACTCAGCAATGCCC
GAAGGTCTAAGCACGCATGCGAAGCCGCCATCTCCGACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10491#0      ------------------------------------------------------------
consensus_10491#2      ------------------------------------------------------------
consensus_10491#3      ------------------------------------------------------------
consensus_10491#4      ------------------------------------------------------------
consensus_10491#1      TCGAGGGCCAGAATTCGGCACGAGGCGTTACTTAGTTGCACATGCCAAAAAATGCCAGAA 60
                                                                                   

consensus_10491#0      ------------------------------------------------------------
consensus_10491#2      ------------------------------------------------------------
consensus_10491#3      ------------------------------------------------------------
consensus_10491#4      ------------------------------------------------------------
consensus_10491#1      AACGACGCAGTGAGACTATACATTTTGCTTGACCAGGCCTCACTAGAGTCAGTGAAGGCG 120
                                                                                   

consensus_10491#0      --------------------------------------------GATATTTATTTGTAAA 16
consensus_10491#2      ------------------------------------------------------------
consensus_10491#3      ------------------------------------------------------------
consensus_10491#4      ------------------------------------------------------------
consensus_10491#1      TCTAGTGGAAAAGAGTTTCAACTGCTTAATCCTGACAGACATAAAGATCGGATTTTAAAG 180
                                                                                   

consensus_10491#0      TAAAAGACTTGCACTTGTTATTGTATTGCAAAAGTGAAGTGCATTTAATTAATTGGAAGA 76
consensus_10491#2      --------------------------TGCAAAAGTGAAGTGCATTTAATTAATTGGAAGA 34
consensus_10491#3      ----------------------------ATGGATTGGAAGACGGGGG-TCAGGTGGATCG 31
consensus_10491#4      -----CTGGCATGCTAACTAGTTACGCGATCCAGCGTCAGATGGGGGGTCAGGTGGATCG 55
consensus_10491#1      GCCGGTGTTGATGTAGCCACAGTTCGTCCAGATATTACTCATCAATGTCTACTTATGCTA 240
                                                                         *  *      

consensus_10491#0      TTTAACTGTTTGTTA--TCATTTCCAATAGTCACCAGAAACACTCCCAAATATAAAAAAA 134
consensus_10491#2      TTTAACTGTTTGTTA--TCATTTCCAATAGTCACCAGAAACACTCCCAAATATAAAAAAA 92
consensus_10491#3      TCTACCACTACACCA--CAGATT--ATTGGC--CCAATGCAAACCACACACGCAACCGCC 85
consensus_10491#4      TCTACCACTACACCA--CAGACT--ATTGGC--CCAATGCAAACCACACACGCAACCGCC 109
consensus_10491#1      CTTGATAGCCCACTAAACCGAGTTGGTAAACTACAGGTTTTTATTCGAACAAGAAAAAAT 300
                         *           *       *          *             *     **     

consensus_10491#0      GCAATGACAAAAGAATAATATAAGCCAAACACACCGTACACAAGTTAATAATAAATAGCT 194
consensus_10491#2      GCAATGACAAAAGAATAATATAAGCCAAACACACCGTACACAAGTTAATAATAAATAGCT 152
consensus_10491#3      GACGTGACAAAACCAAGCCATCAGCCGACCA-GCCG-----AAGCTAGTAACAAACCG-- 137
consensus_10491#4      GACGTGACAAAACCAAGCCATCAGCCGACCA-GCCG-----AAGCTAGTAACAAACCG-- 161
consensus_10491#1      GTGATAATTGAAGTGAACCCTAAAACAAGGGTACCA--CGTACGTTTGATCGATTTTGTG 358
                       *   * *   **        * *  * *     **      * * *      *    *  

consensus_10491#0      TCATCACAAAGAAAAGGTCATGTAAATTCTGATCAAATAATTAAATGACTGAAAGTCAAC 254
consensus_10491#2      TCATCACAAAGAAAAGGTCATGTAAATTCTGATCAAATAATTAAATGACTGAAAGTCAAC 212
consensus_10491#3      --ATCACACTCAG-AATGCCCG-AAGGTCTAAGCACGCATGCGAAGCG--CATCTC-GAC 190
consensus_10491#4      --ACCACACTCAGCAATGCCCG-AAGGTCTAAGCACGCATGCGAAGCCGCCATCTCCGAC 218
consensus_10491#1      GACTTATGGTACAACTTTTACACAAACTCTCAATACATGCTGAAGGTGGCAACCGTGAAA 418
                            *                 **  *** *  *        *       *      * 

consensus_10491#0      AA--AATAGTTATTATTAGATGTACTTCATTTATTCATTGGCAGGCATGTAACCAAAATT 312
consensus_10491#2      AA--AATAGTTATTATTAGATGTACTTCATTTATTCATTGGCAGGCATGTAACCAAAATT 270
consensus_10491#3      AC--ACCGACAGATCCACTACAGCCAGTAGTAACACTCCGGCCATAATGAGCCAAAGACC 248
consensus_10491#4      A----------------------------------------------------------- 219
consensus_10491#1      AACTATTAAAGGTCGTCAAAAACCCTGTAACACGACACTTTCCAATTGGTGCTCCAGTAA 478
                       *                                                           

consensus_10491#0      AAATAATGCCAGTACTTGAATTTGTTTGATTTCA-------TCAGCTGGAGGTAAAACAC 365
consensus_10491#2      AAATAATGCCAGTACTTGAATTTGTTTGATTTCA-------TCAGCTGGAGGTAAAACAC 323
consensus_10491#3      CTAATCCATACAATACCATATTTACACGAATTCA-------TATCAAGCT---------- 291
consensus_10491#4      ------------------------------------------------------------
consensus_10491#1      TTACAATGTCGTTTTCATCAAAGGAACAAATTAAACCACTTCAACTAGCTGAAGAGACAC 538
                                                                                   

consensus_10491#0      GTTGTTCTAATGTTGTAGAGGCAGTGGTAGTTGTTGCTGACAATATTGAAGTTTCAGCGG 425
consensus_10491#2      GTTGTTCTAATGTTGTAGAGGCAGTGGTAGTTGTTGCTGACAATATTAAAGTTTCAGCGG 383
consensus_10491#3      ------------------------------------------------------------
consensus_10491#4      ------------------------------------------------------------
consensus_10491#1      AGAAGCCTAATCCTCAATCAGTTGTCATTGTTATTGGTGCATTAGCTCATGGTTCAGTTG 598
                                                                                   

consensus_10491#0      TGACAGTTGTTTCTGGGATCTTTTCTTGTATCTTGGTAGGGTCAGTTGCCGCTGTCTTAT 485
consensus_10491#2      TGACAGTTGTTTCTGGGATGTCCTC--GTACCA--------------------------- 414
consensus_10491#3      ------------------------------------------------------------
consensus_10491#4      ------------------------------------------------------------
consensus_10491#1      TCGATACTTGTAAAGAGTTTATACAACGTACAGTCAGTATTAGCAACTTCCCTTTATCGG 658
                                                                                   

consensus_10491#0      TACTCGCTGCACTTAACAGAGTAGTTGGTGTGTTTTTGTAGTCGAAATTCATGTAAATTG 545
consensus_10491#2      ------------------------------------------------------------
consensus_10491#3      ------------------------------------------------------------
consensus_10491#4      ------------------------------------------------------------
consensus_10491#1      CCGCCCAGACATGCGCTCGAATATGTACTGCATTTGAGAAGTATGGTGTGTTGAAGATAT 718
                                                                                   

consensus_10491#0      CAGCTTGTAAAGGGATCAGTTGTTCAGATTTGTGAAATTGATCAATTATTTGATCTTCGC 605
consensus_10491#2      ------------------------------------------------------------
consensus_10491#3      ------------------------------------------------------------
consensus_10491#4      ------------------------------------------------------------
consensus_10491#1      TTTAAATGGAGAAAAACGCAGTAGAAACCTGATACGTTACATACAGTGATATTATGATAT 778
                                                                                   

consensus_10491#0      TAACTGGAACTAAACTTGAACTTTGTAGTGTCAGTAACTTGTTGGTTTTTGGTATTAAAG 665
consensus_10491#2      ------------------------------------------------------------
consensus_10491#3      ------------------------------------------------------------
consensus_10491#4      ------------------------------------------------------------
consensus_10491#1      TTATTTGTAATAAAGACTTGCACTTGTATTTGATTGCAAAAGTGAGTGCATTTATTAATT 838
                                                                                   

consensus_10491#0      TAACATTAATACCTAGTTTGTTACCACGACGGAAGGCCACTATCTTAGGATCATCTTTGT 725
consensus_10491#2      ------------------------------------------------------------
consensus_10491#3      ------------------------------------------------------------
consensus_10491#4      ------------------------------------------------------------
consensus_10491#1      ------------------------------------------------------------
                                                                                   

consensus_10491#0      AATCGCCAGAACTCTGACCCCCCGTCTGGACGGGGGATCAGGTGGATCGTCTACCACTAC 785
consensus_10491#2      ------------------------------------------------------------
consensus_10491#3      ------------------------------------------------------------
consensus_10491#4      ------------------------------------------------------------
consensus_10491#1      ------------------------------------------------------------
                                                                                   

consensus_10491#0      ACCACAGACTATTGGCCCAATGCAAACCACACACGCAACCGCCGACGTGACAAAACCAAG 845
consensus_10491#2      ------------------------------------------------------------
consensus_10491#3      ------------------------------------------------------------
consensus_10491#4      ------------------------------------------------------------
consensus_10491#1      ------------------------------------------------------------
                                                                                   

consensus_10491#0      CCATCAGCCGACCAGCCGAAGCTAGTAACAAACCGACCACACTCAGCAATGCCCGAAGGT 905
consensus_10491#2      ------------------------------------------------------------
consensus_10491#3      ------------------------------------------------------------
consensus_10491#4      ------------------------------------------------------------
consensus_10491#1      ------------------------------------------------------------
                                                                                   

consensus_10491#0      CTAAGCACGCATGCGAAGCCGTCATCTCCGACACACCGGACAGATCCACTACAGCCAGTT 965
consensus_10491#2      ------------------------------------------------------------
consensus_10491#3      ------------------------------------------------------------
consensus_10491#4      ------------------------------------------------------------
consensus_10491#1      ------------------------------------------------------------
                                                                                   

consensus_10491#0      AGTAACACTCACGGGCCATAAATGAGCCAAAGAACCCCCGTCAATTACAATACCATATTT 1025
consensus_10491#2      ------------------------------------------------------------
consensus_10491#3      ------------------------------------------------------------
consensus_10491#4      ------------------------------------------------------------
consensus_10491#1      ------------------------------------------------------------
                                                                                   

consensus_10491#0      AACACGGGATTCGTTATTCAGGCGCATTATCGGCGG 1061
consensus_10491#2      ------------------------------------
consensus_10491#3      ------------------------------------
consensus_10491#4      ------------------------------------
consensus_10491#1      ------------------------------------