cluster # 10492

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Schistosoma mansoni
cluster # 10492 cluster # 10492 Sequences # 17 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10492#0 length = 924 sequences # 15

consensus_10492#1 length = 608 sequences # 1
consensus_10492#2 length = 583 sequences # 1

consensusID : consensus_10492#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 924
fasta sequence

                              [GGTTTTACTCTTGTGATTTGTTGCATGTATTCTACCAAGTGTATACAGAAACAAGCGCATAAAGAAGGAATATGGTGCTGCACATGGGGTGAAAATCGGAACAGAAATAAACAGTACATTATTACAGGTTCTTTGGATAATGGCCTCATTGCTTGGGAGTGGACTAATAGTCAGTTAAAATGTCTTTATCAATTTGAAGGACATAGGTTGGGTGTGATTTCGGTTGACATAAATTCAACAGGTACATTAGCAGCATCCAGCAGTCTTGATAGCCAGATTTTATTATGGGATCTGGAAACAGGAAGATTAACGAAAACATATGACGGTGATCCAGCTGATACCTGGACTATTGCTTTTTCTCCTGATTCGCGTTTCCTAGCAACTGGAAGTCATACTGGTTGTGTAAATATGATTAATGTACAAACTGCTCAGAAAGAGGGTTCTATTCAATTAGAGGGGAAATTCGTGTACAGCCTTGCTTATATCTCTGACGGATC-TAAGCTAGCTGCTGGAAC-AATCAATGGGCTTGTCAGCATTTG-TGATTTAGAAACAGGGAGTGTTC-AGTTTTT-GGATGGACATGCCACACCGGTACGCTCAGTTTCGTTTTCACCTGATGGACGTCTATTAGCTTCTGCATCTGATGATAAACAAATTAAAGTTTTTGATGTACGCGATGGTCGACTAGTTATCCCTAGTTTAAATGGTCATAAAGGATGGGTTGTATCGGTAGACTTCGCTTCAGATAATCGACATCTTGTCACAGCATCCACTGATTGTTCTGTTCGAATCTGGGATCTAGCATCGAAAGAAGAAAAACATTGTTTTAATACACATGAAGATCAGGTATGGTGCGCTCGTTATAGTCCTCAAGGAAATAATATTATATCTGTAGGAGATGATAGATCTATCATGATTTATCAATGT]

[+] EMBL SM30261              [GGTTTTACTCTTGTGATTTGTTGCATGTATTCTACCAAGTGTATACAGAAACAAGCGCATAAAGAAGGAATATGGTGCTGCACATGGGGTGAAAATCGGAACAGAAATAAACAGTACATTATTACAGGTTCTTTGGATAATGGCCTCATTGCTTGGGAGTGGACTAATAGTCAGTTAAAATGTCTTTATCAATTTGAAGGACATAGGTTGGGTGTGATTTCGGTTGACATAAATTCAACAGGTACATTAGCAGCATCCAGCAGTCTTGATAGCCAGATTTTATTATGGGATCTGGAAACAGGAAGATTAACGAAAACATATGACGGTGATCCAGCTGATACCTGGACTATTGCTTTTTCTCCTGATTCGCGTTTCCTAGCAACTGGAAGTCATACTGGTTGTGTAAATATGATTAATGTACAAACTGCTCAGAAAGAGGGTTCTATTCAATTAGAGGGGAAATTCGTGTACAGMCTTGCTTATATCTCTGACGGATC TAAGCTAGCTGCTGGAAC AATCAATGGGCTTGTCAGCATTTG TGATTTAGAAACAGGGAGTGTTC AGTTTTT GGATGGACATGCCACACCGGTACGCTCAGTTTCGTTTTCACCTGATGGACGTCTATTAGCTTCTGCATCTGATGATAAACAAATTAAAGTTTTTGATGTACGCGATGGTCGACTAGTTATCCCTAGTTTAAATGGTCATAAAGGATGGGTTGTATCGGTAGACTTCGCTTCAGATAATCGACATCTTGTCACAGCATCCACTGATTGTTCTGTTCGAATCTGGGATCTAGCATCGAAAGAAGAAAAACATTGTTTTAATACACATGAAGATCAGGTATGGTGCGCTCGTTATAGTCCTCAAGGAAATAATATTATATCTGTAGGAGATGATAGATCTATCATGATTTATCAATG ]
[+] EMBL CD079203             [GGTTTTACTCTTGTGATTTGTTGCATGTATTCTACCAAGTGTATACAGAAACAAGCGCATAAAGAAGGAATATGGTGCT CACATGGGGTGAAAATCGGAACAGAAATAAACAGTACATTATTACAGGTTCTTTGGATAATGGCCTCATTGCTTGGGAGTGGACTAATAGTCAGTTAAAATGTCTTTATCAATTTGAAGGACATAGGTTGGGTGTGATTTCGGTTGACATAAATTCAACAGGTACATTAGCAGCATCCAGCAGTCTTGATAGCCAGATTTTATTATGGGATCTGGAAACAGGAAGATTAACGAAAACATATGACGGTGATCCAGCTGATACCTGGACTATTGCTTTTTCTCCTGATTCGCGTTTCCTAGCAACTGGAAGTCATACTGGTTGTGTAAATATGATTAATGTACAAACTGCTCAGAAAGAGGGTTCTATTCAATTAGAGGGGAAATTCGTGTACAGCCTTGCTTATATCTCTGACGGATC TAAGCTAGCTGCTGGAAC AATCAATGGGCTTGTCAGCATTTG TGATTTAGAAACAGGGAGTGTTC AGTTTTT GGATGGACATGCCACACCGGTACGCTCAGTTTCGTTTTCACCTGATG                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AI976173             [              GATTTGTTGCATGTATTCTACCAAGTGTATACAGAAACAAGCGCATAAAGAAGGAATATGGTGCTGCACATGGGGTGAAAATCGGAACAGAAATAAACAGTACATTATTACAGGTTCTTTGGATAATGGCCTCATTGCTTGGGAGTGGACTAATAGTCAGTTAAAATGTCTTTATCAATTTGAAGGACATAGGTTGGGTGTGATTTCGGTTGACATAAATTCAACAGGTACATTAGCAGCATCCAGCAGTCTTGATAGCCAGATTTTATTATGGGATCTGGAAACAGGAAGATTAACGAAAACATATGACGGTGATCCAGCTGATACCTGGACTATTGCTTTTTCTCCTGATTCGCGTTTCCTAGCAACTGGAAGTCATACTGGTTGTGTAAATATGATTAATGTACAAACTGCTCAGAAAGAGGGTTCTATTCAATTAGAGGGGAAATTCGTGTACAGCCTTGCTTATATCTCTGACGGATC TAAGCTAGCTGCTGGAAC AATCAATGGGCTTGTCAGCATTTG TGATTTAGAAACAG                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AI975808             [              GATTTGTTGCATGTATTCTACCAAGTGTATACAGAAACAAGCGCATAAAGAAGGAATATGGTGCTGCACATGGGGTGAAAATCGGAACAGAAATAAACAGTACATTATTACAGGTTCTTTGGATAATGGCCTCATTGCTTGGGAGTGGACTAATAGTCAGTTAAAATGTCTTTATCAATTTGAAGGACATAGGTTGGGTGTGATTTCGGTTGACATAAATTCAACAGGTACATTAGCAGCATCCAGCAGTCTTGATAGCCAGATTTTATTATGGGATCTGGAAACAGGAAGATTAACGAAAACATATGACGGTGATCCAGCTGATACCTGGACTATTGCTTTTTCTCCTGATTCGCGTTTCCTAGCAACTGGAAGTCATACTGGTTGTGTAAATATGATTAATGTACAAACTGCTCAGAAAGAGGGTTCTATTCAATTAGAGGGGAAATTCGTGTACAGCCTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD078847             [                                   CAAGTGTATACAGAAACAAGCGCATAAAGAAGGAATATGGTGCTGCACATGGGGTGAAAATCGGAACAGAAATAAACAGTACATTATTACAGGTTCTTTGGATAATGGCCTCATTGCTTGGGAGTGGACTAATAGTCAGTTAAAATGTCTTTATCAATTTGAAGGACATAGGTTGGGTGTGATTTCGGTTGACATAAATTCAACAGGTACATTAGCAGCATCCAGCAGTCTTGATAGCCAGATTTTATTATGGGATCTGGAAACAGGAAGATTAACGAAAACATATGACGGTGATCCAGCTGATACCTGGACTATTGCTTTTTCTCCTGATTCGCGTTTCCTAGCAACTGGAAGTCATACTGGTTGTGTAAATATGATTAATGTACAAACTGCTCAGAAAGAGGGTTCTATTCAATTAGAGGGGAAATTCGTGTACAGCCTTGCTTATATCTCTGACGGATC TAAGCTAGCTGCTGGAAC AATCAATGGGCTTGTCAGCATTTG TGATTTAGAAACAGGGAGTGTTC AGTTTTT GGATGGACATGCCACACCGGTACGCTCAGTTTCGTTTTCACCTGATGGACGTCTATTAGCTTCTGCATCTGATGAnt                                                                                                                                                                                                                                                                                      ]
[+] EMBL AI110907             [                                                                       ATGGTGCTGCACATGGGGTGAAAATCGGAACAGAAATAAACAGTACATTATTACAGGTTCTTTGGATAATGGCCTCATTGCTTGGGAGTGGACTAATAGTCAGTTAAAATGTCTTTATCAATTTGAAGGACATAGGTTGGGTGTGATTTCGGTTGACATAAATTCAACCGGTACATTAGCAGCATCCAGCAGTCTTGATAGCCAGATTTTATTATGGGATCTGGAAACAGGAAGATTAACGAAAACATNTGACGGTGATCCAGCTGATACCTGGACTATTGCTTTTTCTCCTGATTCGCGTTTCCTAGCAACTGGAAGTCATACTGGTTGTGTAAATATGATTAATGTACAAACTGCTCAGAAAGAGGGTTCTATTCAATTAGAGGGGAAATTCGTGTACAGCCTTGCTTATATCTCTGACGGATC TAAGCTAGCTGCTGGAAC AATCAATGGGC TGTCAGCATTTG TGATTTA                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD083469             [                                                                                                                                    gTGGATAATGGCCTCATTGCTTGGGAGTGGACTAATAGTCAGTTAAAATGTCTTTATCAATTTGAAGGACATAGGTTGGGTGTGATTTCGGTTGACATAAATTCAACAGGTACATTAGCAGCATCCAGCAGTCTTGATAGCCAGATTTTATTATGGGATCTGGAAACAGGAAGATTAACGAAAACATATGACGGTGATCCAGCTGATACCTGGACTATTGCTTTTTCTCCTGATTCGCGTTTCCTAGCAACTGGAAGTCATACTGGTTGTGTAAATATGATTAATGTACAAACTGCTCAGAAAGAGGGTTCTATTCAATTAGAGGGGAAATTCGTGTACAGCCTTGCTTATATCTCTGACGGATC TAAGCTAGCTGCTGGAAC AATCAATGGGCTTGTCAGCATTTG TGATTTAGAAACAGGGAGTGTTC AGTTTTT GGATGGACATGCCACACCG                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD083458             [                                                                                                                                                           cacgaGGACTAATAGTCAGTTAAAATGTCTTTATCAATTTGAAGGACATAGGTTGGGTGTGATTTCGGTTGACATAAATTCAACAGGTACATTAGCAGCATCCAGCAGTCTTGATAGCCAGATTTTATTATGGGATCTGGAAACAGGAAGATTAACGAAAACATATGACGGTGATCCAGCTGATACCTGGACTATTGCTTTTTCTCCTGATTCGCGTTTCCTAGCAACTGGAAGTCATACTGGTTGTGTAAATATGATTAATGTACAAACTGCTCAGAAAGAGGGTTCTATTCAATTAGAGGGGAAATTCGTGTACAGCCTTGCTTATATCTCTGACGGATC TAAGCTAGCTGCTGGAAC AATCAATGGGCTTGTCAGCATTTG TGATTTAGAAACAGGGAGTGTTC AGTTTTT GGATGGACATGCCACACCGGTACGCTCAGTTTCGTTTTCACCTGATGGACGTCTATTAGCT                                                                                                                                                                                                                                                                                                      ]
[+] EMBL SM7371               [                                                                                                                                                                                               ATTTGAAGGACATAGGTTGGGTGTGATTTCGGTTGACATAAATTCAACAGGTACATTAGCAGCATCCAGCAGTCTTGATAGCCAGATTTTATTATGGGATCTGGAAACAGGAAGATTAACGAAAACATATGACGGTGATCCAGCTGATACCTGGACTATTGCTTTTTCTCCTGATTCGCGTTTCCTAGCAACTGGAAGTCATACTGGTTGTGTAAATATGATTAATGTACAAACTGCTCAGAAAGAGGGTTCTATTCAATTAGAGGGGAAATTCGTGTACAGCCTTGCTTATATCTCTGACGGATCTTAAGCTAGCTGCTGGAACAAATCAATGGGCTTGTCAGCATTTGNGGATTTAGAAACAGGGAGTGTTCAAGTTTTTGGGTTGGACATNCCACACCGGTACGCTCAGNTTCCGTTTCACCTGATGGACGTCTTTTAGCTTCTGCATCTTATGATAAACAAATTAAAGTTTg                                                                                                                                                                                                                                                                      ]
[+] EMBL CD115037             [                                                                                                                                                                                                                                                         tcccCATCCAGCAGTCTTGATAGCCAGATTTTATTATGGGATCTGGAAACAGGAAGATTAACGAAAACATATGACGGTGATCCAGCTGATACCTGGACTATTGCTTTTTCTCCTGATTCGCGTTTCCTAGCAACTGGAAGTCATACTGGTTGTGTAAATATGATTAATGTACAAACTGCTCAGAAAGAGGGTTCTATTCAATTAGAGGGGAAATTCGCGTACAGCCTTGCTTATATCTCTGACGGATC TAAGCTAGCTGCTGGAAC AATCAATGGGCTTGTCAGCATTTG TGATTTAGAAACAGGGAGTGTTC AGTTTTT GGATGGACATGCCACACCGGTACGCTCAGTTTCGTTTTCACCTGATGGACGTCTATTAGCTTCTGCATCTGATGATAAACAAATTAAAGTTTTTGATGTACGCGATGGTCGACTAGTTATCCCTAGTTTAAATGGTCATAAAGGATGGGTTGTATCGGT                                                                                                                                                                                                    ]
[+] EMBL CD137351             [                                                                                                                                                                                                                                                                                        TATTATGGGATCTGGAAACAGGAAGATTAACGAAAACATATGACGGTGATCCAGCTGATACCTGGACTATTGCTTTTTCTCCTGATTCGCGTTTCCTAGCAACTGGAAGTCATACTGGTTGTGTAAATATGATTAATGTACAAACTGCTCAGAAAGAGGGTTCTATTCAATTAGAGGGGAAATTCGTGTACAGCCTTGCTTATATCTCTGACGGATC TAAGCTAGCTGCTGGAAC AATCAATGGGCTTGTCAGCATTTG TGATTTAGAAACAGGGAGTGTTC AG TTTT GGATGGACATGCCACACCGGTACGCTCAGTTTCGTTTTCACCTGATGGACGTCTATTAGCTTCTGCATCTGATGATAAACAAATTAAAGTTTTTGATGTACGCGATGGTCGACTAGTTATCCCTAGTTTAAATGGTCATAAAGGATGGGTTGTATCGGTAGACTTCGCTTCAGATAATCGACATCTTGTCACAGCATCCACTGATTGTTCTGTTCGAATCTGGGATCTAGCATCGAAAGAAGAANAACATTGTTTTAATACACATGAAG                                                                                      ]
[-] EMBL CD074811             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATTCGTGTACAGCCTTGCTTATATCTCTGACGGATC TAAGCTAGCTGCTGGAAC AATCAATGGGCTTGTCAGCATTTG TGATTTAGAAACAGGGAGTGTTC AGTTTTT GGATGGACATGCCACACCGGTACGCTCAGTTTCGTTTTCACCTGATGGACGTCTATTAGCTTCTGCATCTGATGATAAACAAATTAAAGTTTTTGATGTACGCGATGGTCGACTAGTTATCCCTAGTTTAAATGGTCATAAAGGATGGGTTGTATCGGTAGACTTCGCTTCAGATAATCGACATCTTGTCACAGCATCCACTGATTGTTCTGTTCGAATCTGGGATCTAGCATCGAAAGAAGAAAAACATTGTTTTAATACACATGAAGATCAGGTATGGTGCGCTCGTTATAGTCCTCAAGGAAATAATATTATATCTGTAGGAGATGATAGATCTATCATGATTTATCAATGT]
[-] EMBL CD073308             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCTGACGGATT TAAGCTAGCTGCTGGAAC AATCAATGGGCTTGTCAGCATTTG TGATTTAGAAACAGGGAGTGTTC AGTTTTT GGATGGACATGCCACACCGGTACGCTCAGTTTCGTTTTCACCTGATGGACGTCTATTAGCTTCTGCATCTGATGATAAACAAATTAAAGTTTTTGATGTACGCGATGGTCGACTAGTTATCCCTAGTTTAAATGGTCATAAAGGATGGGTTGTATCGGTAGACTTCGCTTCAGATAATCGACATCTTGTCACAGCATCCACTGATTGTTCTGTTCGAATCTGGGATCTAGCATCGAAAGAAGAAAAACATTGTTTTAATACACATGAAGATCAGGTATGGTGCGCTCGTTATAGTCCTCAAGGAAATAATATTATATCTGTAGGAGATGATAGATCTATCATGATTTATCAATGT]
[-] EMBL CD075209             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGATC TAAGCTAGCTGCTGGAAC AATCAATGGGCTTGTCAGCATTTG TGATTTAGAAACAGGGAGTGTTC AGTTTTT GGATGGACATGCCACACCGGTACGCTCAGTTTCGTTTTCACCTGATGGACGTCTATTAGCTTCTGCATCTGATGATAAACAAATTAAAGTTTTTGATGTACGCGATGGTCGACTAGTTATCCCTAGTTTAAATGGTCATAAAGGATGGGTTGTATCGGTAGACTTCGCTTCAGATAATCGACATCTTGTCACAGCATCCACTGATTGTTCTGTTCGAATCTGGGATCTAGCATCGAAAGAAGAAAAACATTGTTTTAATACACATGAAGATCAGGTATGGTGCGCTCGTTATAGTCCTCAAGGAAATAATATTATATCTGTAGGAGATGATAGATCTATCATGATTTATCAATGT]
[-] EMBL CD077253             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            G TGATTTAGAAACAGGGAGTGTTC AGTTTTT GGATGGACATGCCACACCGGTACGCTCAGTTTCGTTTTCACCTGATGGACGTCTATTAGCTTCTGCATCTGATGATAAACAAATTAAAGTTTTTGATGTACGCGATGGTCGACTAGTTATCCCTAGTTTAAATGGTCATAAAGGATGGGTTGTATCGGTAGACTTCGCTTCAGATAATCGACATCTTGTCACAGCATCCACTGATTGTTCTGTTCGAATCTGGGATCTAGCATCGAAAGAAGAAAAACATTGTTTTAATACACATGAAGATCAGGTATGGTGCGCTCGTTATAGTCCTCAAGGAAATAATATTATATCTGTAGGAGATGATAGATCTATCATGATTTATCAATGT]




>consensus_10492#0
GGTTTTACTCTTGTGATTTGTTGCATGTATTCTACCAAGTGTATACAGAAACAAGCGCAT
AAAGAAGGAATATGGTGCTGCACATGGGGTGAAAATCGGAACAGAAATAAACAGTACATT
ATTACAGGTTCTTTGGATAATGGCCTCATTGCTTGGGAGTGGACTAATAGTCAGTTAAAA
TGTCTTTATCAATTTGAAGGACATAGGTTGGGTGTGATTTCGGTTGACATAAATTCAACA
GGTACATTAGCAGCATCCAGCAGTCTTGATAGCCAGATTTTATTATGGGATCTGGAAACA
GGAAGATTAACGAAAACATATGACGGTGATCCAGCTGATACCTGGACTATTGCTTTTTCT
CCTGATTCGCGTTTCCTAGCAACTGGAAGTCATACTGGTTGTGTAAATATGATTAATGTA
CAAACTGCTCAGAAAGAGGGTTCTATTCAATTAGAGGGGAAATTCGTGTACAGCCTTGCT
TATATCTCTGACGGATCTAAGCTAGCTGCTGGAACAATCAATGGGCTTGTCAGCATTTGT
GATTTAGAAACAGGGAGTGTTCAGTTTTTGGATGGACATGCCACACCGGTACGCTCAGTT
TCGTTTTCACCTGATGGACGTCTATTAGCTTCTGCATCTGATGATAAACAAATTAAAGTT
TTTGATGTACGCGATGGTCGACTAGTTATCCCTAGTTTAAATGGTCATAAAGGATGGGTT
GTATCGGTAGACTTCGCTTCAGATAATCGACATCTTGTCACAGCATCCACTGATTGTTCT
GTTCGAATCTGGGATCTAGCATCGAAAGAAGAAAAACATTGTTTTAATACACATGAAGAT
CAGGTATGGTGCGCTCGTTATAGTCCTCAAGGAAATAATATTATATCTGTAGGAGATGAT
AGATCTATCATGATTTATCAATGT

consensusID : consensus_10492#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 608
fasta sequence

                              [ACCAAGTGTATACAGAAACAAGCGCATAAAGAAGGAATATGGTGCTGCACATGGGGTGAAAATCGGAACAGAAATAAACAGTACATTATTACAGGTTCTTTGGATAATGGCCTCATTGCTTGGGAGTGGACTAATAGTCAGTTAAAATGTCTTTATCAATTTGAAGGACATAGGTTGGGTGTGATTTCGGTTGACATAAATTCAACAGGTACATTAGCAGCATCCAGCAGTCTTGATAGCCAGATTTTATTATGGGATCTGGAAACAGGAAGATTAACGAAAACCNNNNNNNNNNNNNNAGCTGATACCTGGACTATTGCTTTTTCTCCTGATTCGCGTTTCCTAGCAACTGGAAGTCATACTGGTTGTGTAAATATGATTAATGTACAAACTGCTCAGAAAGAGGGTTCTATTCAATTAGAGGGGAAATTCGATCTAAGCTAGCTGCTGGAACAATCAATGGGCTTGTCAGCATTTGTGATTTAGAAACAGGGAGTGTTCAGTTTTTGGATGGACATGCCACACCGGTACGCTCAGTTTCGTTTTCACCTGATGGACGTCTATTAGCTTCTGCATCTGATGATAAACANATTAAAGTNNNNNNNNNN]

[+] EMBL CD080985             [ACCAAGTGTATACAGAAACAAGCGCATAAAGAAGGAATATGGTGCTGCACATGGGGTGAAAATCGGAACAGAAATAAACAGTACATTATTACAGGTTCTTTGGATAATGGCCTCATTGCTTGGGAGTGGACTAATAGTCAGTTAAAATGTCTTTATCAATTTGAAGGACATAGGTTGGGTGTGATTTCGGTTGACATAAATTCAACAGGTACATTAGCAGCATCCAGCAGTCTTGATAGCCAGATTTTATTATGGGATCTGGAAACAGGAAGATTAACGAAAACCNNNNNNNNNNNNNNAGCTGATACCTGGACTATTGCTTTTTCTCCTGATTCGCGTTTCCTAGCAACTGGAAGTCATACTGGTTGTGTAAATATGATTAATGTACAAACTGCTCAGAAAGAGGGTTCTATTCAATTAGAGGGGAAATTCGATCTAAGCTAGCTGCTGGAACAATCAATGGGCTTGTCAGCATTTGTGATTTAGAAACAGGGAGTGTTCAGTTTTTGGATGGACATGCCACACCGGTACGCTCAGTTTCGTTTTCACCTGATGGACGTCTATTAGCTTCTGCATCTGATGATAAACANATTAAAGTNNNNNNNNNN]




>consensus_10492#1
ACCAAGTGTATACAGAAACAAGCGCATAAAGAAGGAATATGGTGCTGCACATGGGGTGAA
AATCGGAACAGAAATAAACAGTACATTATTACAGGTTCTTTGGATAATGGCCTCATTGCT
TGGGAGTGGACTAATAGTCAGTTAAAATGTCTTTATCAATTTGAAGGACATAGGTTGGGT
GTGATTTCGGTTGACATAAATTCAACAGGTACATTAGCAGCATCCAGCAGTCTTGATAGC
CAGATTTTATTATGGGATCTGGAAACAGGAAGATTAACGAAAACCNNNNNNNNNNNNNNA
GCTGATACCTGGACTATTGCTTTTTCTCCTGATTCGCGTTTCCTAGCAACTGGAAGTCAT
ACTGGTTGTGTAAATATGATTAATGTACAAACTGCTCAGAAAGAGGGTTCTATTCAATTA
GAGGGGAAATTCGATCTAAGCTAGCTGCTGGAACAATCAATGGGCTTGTCAGCATTTGTG
ATTTAGAAACAGGGAGTGTTCAGTTTTTGGATGGACATGCCACACCGGTACGCTCAGTTT
CGTTTTCACCTGATGGACGTCTATTAGCTTCTGCATCTGATGATAAACANATTAAAGTNN
NNNNNNNN

consensusID : consensus_10492#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 583
fasta sequence

                              [CCTCCGAGGCCAANAATTGCGGCACGAGGCGTTTCCTAGCAACTGGAAGTCATACTGGTTGTGTAAATATGATTAATGTACAAACTGCTCAGAAAGAGGGTTCTATTCAATTAGAGGGGAAATTCGTGTACAGCCTTGCTTATATCTCTGACGGATCTAAGCTAGCTGCTGGAACAATCAATGGGCTTGTCAGCATTTGTGATTTAGAAACAGGGAGTGTTCAGTTTTTGGATGGACATGCCACACCGGTACGCTCAGTTTCGTTTTCACCTGATGGACGTCTATTAGCTTCTGCATCTGATGATAAACAAATTAAAGTTTTTGATGTACGCGATGGTCGACTAGTTATCCCTAGTTTAAATGGTCATAAAGGATGGGTTGTATCGGTAGACTTCGCTTCAGATAATCGACATCTTGTCACAGCATCCACTGATTGTTCTGTTCGAATCTGGGATCTAGCATCGAAAGAAGAAAAACATTGTTTTAATACACATGAAGATCAGGTATGGTGCGCTCGTTATAGTCCTCAAGGAAATAATATTATATCTGTAGGAGATGATAGATCTATCATGATTTATCAATG]

[+] EMBL CD081375             [CCTCCGAGGCCAANAATTGCGGCACGAGGCGTTTCCTAGCAACTGGAAGTCATACTGGTTGTGTAAATATGATTAATGTACAAACTGCTCAGAAAGAGGGTTCTATTCAATTAGAGGGGAAATTCGTGTACAGCCTTGCTTATATCTCTGACGGATCTAAGCTAGCTGCTGGAACAATCAATGGGCTTGTCAGCATTTGTGATTTAGAAACAGGGAGTGTTCAGTTTTTGGATGGACATGCCACACCGGTACGCTCAGTTTCGTTTTCACCTGATGGACGTCTATTAGCTTCTGCATCTGATGATAAACAAATTAAAGTTTTTGATGTACGCGATGGTCGACTAGTTATCCCTAGTTTAAATGGTCATAAAGGATGGGTTGTATCGGTAGACTTCGCTTCAGATAATCGACATCTTGTCACAGCATCCACTGATTGTTCTGTTCGAATCTGGGATCTAGCATCGAAAGAAGAAAAACATTGTTTTAATACACATGAAGATCAGGTATGGTGCGCTCGTTATAGTCCTCAAGGAAATAATATTATATCTGTAGGAGATGATAGATCTATCATGATTTATCAATG]




>consensus_10492#2
CCTCCGAGGCCAANAATTGCGGCACGAGGCGTTTCCTAGCAACTGGAAGTCATACTGGTT
GTGTAAATATGATTAATGTACAAACTGCTCAGAAAGAGGGTTCTATTCAATTAGAGGGGA
AATTCGTGTACAGCCTTGCTTATATCTCTGACGGATCTAAGCTAGCTGCTGGAACAATCA
ATGGGCTTGTCAGCATTTGTGATTTAGAAACAGGGAGTGTTCAGTTTTTGGATGGACATG
CCACACCGGTACGCTCAGTTTCGTTTTCACCTGATGGACGTCTATTAGCTTCTGCATCTG
ATGATAAACAAATTAAAGTTTTTGATGTACGCGATGGTCGACTAGTTATCCCTAGTTTAA
ATGGTCATAAAGGATGGGTTGTATCGGTAGACTTCGCTTCAGATAATCGACATCTTGTCA
CAGCATCCACTGATTGTTCTGTTCGAATCTGGGATCTAGCATCGAAAGAAGAAAAACATT
GTTTTAATACACATGAAGATCAGGTATGGTGCGCTCGTTATAGTCCTCAAGGAAATAATA
TTATATCTGTAGGAGATGATAGATCTATCATGATTTATCAATG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10492#0      GGTTTTACTCTTGTGATTTGTTGCATGTATTCTACCAAGTGTATACAGAAACAAGCGCAT 60
consensus_10492#1      ---------------------------------ACCAAGTGTATACAGAAACAAGCGCAT 27
consensus_10492#2      ------------------------------------------------------------
                                                                                   

consensus_10492#0      AAAGAAGGAATATGGTGCTGCACATGGGGTGAAAATCGGAACAGAAATAAACAGTACATT 120
consensus_10492#1      AAAGAAGGAATATGGTGCTGCACATGGGGTGAAAATCGGAACAGAAATAAACAGTACATT 87
consensus_10492#2      -------------------CCTCCGAGGCCAANAATTGCGGCACGAGGCGTTTCCTAGCA 41
                                           * *   **   * *** *   **  *              

consensus_10492#0      ATTACAGGTTCTTTGGATAATGGCCTCATTGCTTGGGAGTGGACTAATAGTCAGTTAAAA 180
consensus_10492#1      ATTACAGGTTCTTTGGATAATGGCCTCATTGCTTGGGAGTGGACTAATAGTCAGTTAAAA 147
consensus_10492#2      ACTGGAAGTCATACTGGTTGTGTAAATATGATT----AATGTACAAACTGCTCAGAAAGA 97
                       * *  * **  *   * *  **     **   *    * ** ** **  *      ** *

consensus_10492#0      TGTCTTTATCAATTTGAAGGACATAGGTTGGGTGTGATTTCGGTTGACATAAATTCAACA 240
consensus_10492#1      TGTCTTTATCAATTTGAAGGACATAGGTTGGGTGTGATTTCGGTTGACATAAATTCAACA 207
consensus_10492#2      GGGTTCTATTCAATTAGAGGGGA-AATTCGTGTACAGCCTTGCTT---ATATCTCTGACG 153
                        *  * ***  * **  ***  * *  * * **      * * **   ***  *   ** 

consensus_10492#0      GGTACATTAGCAGCATCCAGCAGTCTTGATAGCCAGATTTTATTATGGGATCTGGAAACA 300
consensus_10492#1      GGTACATTAGCAGCATCCAGCAGTCTTGATAGCCAGATTTTATTATGGGATCTGGAAACA 267
consensus_10492#2      GATCTAA-GCTAGCTGCTGGAACAATCAATGGGCTTGTCAGCATTTGTGATTTAGAAACA 212
                       * *  *     ***  *  * *   *  ** * *   *     * ** *** * ******

consensus_10492#0      GGAAGATTAACGAAAACATATGACGGTGATCCAGCTGATACCTGGACTATTGCTTTTTCT 360
consensus_10492#1      GGAAGATTAACGAAAACCNNNNNNNNNNNNNNAGCTGATACCTGGACTATTGCTTTTTCT 327
consensus_10492#2      GGGAGTGTT-CAGTTTTTGGATGGACATGCCACACCGGTAC--GCTCAGTTTCGTTTTCA 269
                       ** **  *  *                       * * ***  *  *  ** * ***** 

consensus_10492#0      CCTGATTCGCGTTTCCTAGCAACTGGAAGTCATACTGGTTGTGTAAATATGATTAATGTA 420
consensus_10492#1      CCTGATTCGCGTTTCCTAGCAACTGGAAGTCATACTGGTTGTGTAAATATGATTAATGTA 387
consensus_10492#2      CCTGATGGACGTCTATTAGCTTCTGCATCTGATGATAAACAAATTAAAGTTTTTGATGTA 329
                       ******   *** *  ****  *** *  * **  *       * **  *  ** *****

consensus_10492#0      CAAACTGCTCAGAAAGAGGGTTCTA--TTCAATTAGAGGGGAAATTCGTGTACAGCCTTG 478
consensus_10492#1      CAAACTGCTCAGAAAGAGGGTTCTA--TTCAATTAGAGGGGAAATTCG------------ 433
consensus_10492#2      CGCGATGGTCGACTAGTTATCCCTAGTTTAAATGGTCATAAAGGATGGGTTGTATCGGTA 389
                       *    ** **    **      ***  ** ***        *   * *            

consensus_10492#0      CTTATATCTCTGACGGATCTA-AGCTAGCTGCTGGAACAATCAATGGGCTTGTCAGCATT 537
consensus_10492#1      ----------------ATCTA-AGCTAGCTGCTGGAACAATCAATGGGCTTGTCAGCATT 476
consensus_10492#2      GACTTCGCTTCAGATAATCGACATCTTGTCACAGCATCCACTGATTGTTCTGTTCGAATC 449
                                       *** * * ** *   * * * * *   ** *   ***  * ** 

consensus_10492#0      TGTGATTTAGAAAC---AGGGAGTGTTCAGTTTTTGGATGGACATGCCACACCGGTACGC 594
consensus_10492#1      TGTGATTTAGAAAC---AGGGAGTGTTCAGTTTTTGGATGGACATGCCACACCGGTACGC 533
consensus_10492#2      TGGGATCTAGCATCGAAAGAAGAAAAACATTGTTTTAATACACATGAAGATCAGGTATGG 509
                       ** *** *** * *   **        ** * ***  **  *****     * **** * 

consensus_10492#0      TCAGTTTCGTTTTCACCTGATGGACGTCTATTAGCTTCTGCATCTGATGATAAACAAATT 654
consensus_10492#1      TCAGTTTCGTTTTCACCTGATGGACGTCTATTAGCTTCTGCATCTGATGATAAACANATT 593
consensus_10492#2      TGCGCTCGTTATAGTCCTCAAGGAAATAATATTATATCTGTAGGAGATGATAGATCTATC 569
                       *  * *   * *   *** * ***  *    *    **** *   ******* *   ** 

consensus_10492#0      AAAGTTTTTGATGTACGCGATGGTCGACTAGTTATCCCTAGTTTAAATGGTCATAAAGGA 714
consensus_10492#1      AAAGTNNNNNNNNNN--------------------------------------------- 608
consensus_10492#2      ATGATTTATCAATG---------------------------------------------- 583
                       *   *                                                       

consensus_10492#0      TGGGTTGTATCGGTAGACTTCGCTTCAGATAATCGACATCTTGTCACAGCATCCACTGAT 774
consensus_10492#1      ------------------------------------------------------------
consensus_10492#2      ------------------------------------------------------------
                                                                                   

consensus_10492#0      TGTTCTGTTCGAATCTGGGATCTAGCATCGAAAGAAGAAAAACATTGTTTTAATACACAT 834
consensus_10492#1      ------------------------------------------------------------
consensus_10492#2      ------------------------------------------------------------
                                                                                   

consensus_10492#0      GAAGATCAGGTATGGTGCGCTCGTTATAGTCCTCAAGGAAATAATATTATATCTGTAGGA 894
consensus_10492#1      ------------------------------------------------------------
consensus_10492#2      ------------------------------------------------------------
                                                                                   

consensus_10492#0      GATGATAGATCTATCATGATTTATCAATGT 924
consensus_10492#1      ------------------------------
consensus_10492#2      ------------------------------