cluster # 10498

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Schistosoma mansoni
cluster # 10498 cluster # 10498 Sequences # 17 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10498#0 length = 2417 sequences # 16

consensus_10498#1 length = 418 sequences # 1

consensusID : consensus_10498#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 2417
fasta sequence

                              [TATCGATCAGATAGATAGTTGAATTTTTCCACATTCCTTTTAAAAAATATGGATAAAAGAAGTATAGACATATATAGATGACCAATGAGATTTTTCCTATTTAGTTTAGATCTCTGCCTTATTGAATAAATTAAAATAACCCGGGCCCACTCACTACTAATTGAAGTATATTTTATGAACACACACACACGTACACACATTATATATACACACACAAACAAAATCATTCATTTTTGTAAATGAATGTATATAATCTATATATTTGATACATTCATAGATGATATTGGGGTTGTGTCTTGTTTCTTAGGGAGTCTATATACCATTCTCCCATATATATATATATAGTATAGTTTTTNTGTGAGTAAACCTAGATTTTGATTGTTAACATTAGTTTATTGTAAATTGGGAAACATTTTTTTCATTCTGGAATCAATAATATTCAAAATTATTAGATAGGAGAAGTTCACAACTCCTTTAGATCATTAATTTNTGTGAAAGGAATTTATTTTTACCATTATATACCATTATATTAAAGGATTGAAATATAATCGGATAGTAAAAATATCATTTTCATAAATCTATATATACAATAATTAATACCTTATTAATATATACAAATGGGTTGTACA-CTATCTAAAGAAGAGCGAGATGCTCTTGAACAAAGTCGTAATATAGATAAAAAACTTAAAGAAGATGGAATGCAAGCTGCAAAAGATGTGAAACTACTTCTTTTGGGTGCCGGTGAATCAGGAAAGAGCACAATCGTCAAACAAATGAAAATTATTCATGAAGGTGGATTTACACAAGAAGATAATAAACAGTA-TAAACCGGTGGTTTATAGTAATACCATTCAATCGATGGTTGCAATTCTCAGAGCAATGAACACTCTTGGAATTCAATTCGGTGATAGTGAACAAGGAGCAGAAGATGCTCGTATTGTTTGTGATGTTATCCAAGCTATGGAAGATACAAAACCATTTTCAGAAGATTTACTCGATGCAATGAAACGTTTATGGGCTGATTCT-GGTGTAC-AAGAATGTTTTGCACGATCAAATGAATATCAATTAAATGATTCAGCAAAATATTTTCTTGATGATTTGGATCGTCTTGGTGCTAAAGATTATATGCCAACAGAACAAGATATTCTTAGAACTCGTGTTAAAACAACTGGTATTGTGGAAGTACATTTTCAATTTAAAAATATGAATTTCAAACTTTTTGATGTGGGTGGACAACGATCGGAACGTAAAAAATGGATCCATTGCTTTGAAGATGTGACAGCAATTATTTTCTGTGTCGCTATGAGTGAATACGATCAAGTGTTACATGAAGATGAAACAACAAATCGTATGCAAGAATCATTAAAGTTATTCGATTCAATCTGTAATAATAAATGGTTCACTGATACAAGTATTATTTTATTTTTAAATAAAAAAGATCTATTCGAAGAGAAAATTAAACGTTCCCCGTTGACTATTTGTTTCCCAGAATATCCAGGTAAACAAACATATGAAGAAGCAGCCATTTATATTCAAGCGTCATTCGAAGCGAAAAACCGATCACCTAACAAAGAAATTTATTGTCATCAGACATGTGCAACTGATACAAATAATATTCAGTTTGTGTTCGACGCTGTTACCGATGTGATTATAGCAAATAATCTGAAAGGATGTGGTTTGTATTAATTGACTGATTCGTTTATTTATATGTTTGTTTGTTTGTTTATTTTCTTT-GTTCTATGTTTCCTTTCTTTGTTTTGGTGTTTGTCTATCATTATATTAGTCTGTTGATTTTGTGTATGGTTTCTTTCTGGTGCAGTTTCACTCTCAATTTATTCATTCACAGTTGAGTACATATCTTCATTTTGTTTTCGATTACTGCTTAAGAATCATGTTGTACACTTACACACTACTACTACTACTACTGATACACACATAAAGTGTGTAAACGAGTGAAAAG-AAAGATGCACA-TCTACAATACAGAAAGTATTTTCACAAATAACACATTATATAATGATAATCATAATAATAATATTAATCATACAATTATAATTCACATTCGTTTCTTATTTGTTGTGAAATGCTTTTCTCGATGTCTCATCTTTTCTTTGTGTTTTTTCTCTTCTGTTCCCCCCCTTTTATAATCCAAAAATGAAAAGTTGTATAATCGAGTGTTTCTATGTTTCTCTTCTCCCTCAAATATTAATACTTACTTGAGATGGTTACACTTACTTAACGATTTCATAATTAGAATATACACTTTGTAATATTATAAATAACATATACAAATGAATGAAAGTGAATTTAATTGATTCTCAATGCTTAAAAATGTTGAAACAGGCAAGACAATTCCTCATCATGAATGACGATGATGCTGATGGTAGTTTCATTGAAATAAGAAATGTTTACTTCAACTAA]

[+] EMBL AF540394             [TATCGATCAGATAGATAGTTGAATTTTTCCACATTCCTTTTAAAAAATATGGATAAAAGAAGTATAGACATATATAGATGACCAATGAGATTTTTCCTATTTAGTTTAGATCTCTGCCTTATTGAATAAATTAAAATAACCCGGGCCCACTCACTACTAATTGAAGTATATTTTATGAACACACACACACGTACACACATTATATATACACACACAAACAAAATCATTCATTTTTGTAAATGAATGTATATAATCTATATATTTGATACATTCATAGATGATATTGGGGTTGTGTCTTGTTTCTTAGGGAGTCTATATACCATTCTCCCATATATATATATATAGTATAGTTTTTNTGTGAGTAAACCTAGATTTTGATTGTTAACATTAGTTTATTGTAAATTGGGAAACATTTTTTTCATTCTGGAATCAATAATATTCAAAATTATTAGATAGGAGAAGTTCACAACTCCTTTAGATCATTAATTTNTGTGAAAGGAATTTATTTTTACCATTATATACCATTATATTAAAGGATTGAAATATAATCGGATAGTAAAAATATCATTTTCATAAATCTATATATACAATAATTAATACCTTATTAATATATACAAGTGGGTTGTACA CTATCTAAAGAAGAGCGAGATGCTCTTGAACAAAGTCGTAATATAGATTAAAAACTTAAAGAAGATGGAATGCAAGCTGCAAAAGATGTGAAACTACTTCTTTTGGGTGCCGGTGAATCAGGAAAGAGCACAATCGTCAAACAAATGAAAATTATTCATGAAGGTGGATTTACACAAGAAGATAATAAACAGTA TAAACCGGTGGTTTATAGTAATACCATTCAATCGATGGTTGCAATTCTCAGAGCAATGAACACTCTTGGAATTCAATTCGGTGATAGTGAACAAGGAGCAGAAGATGCTCGTATTGTTTGTGATGTTATCCAAGCTATGGAAGATACAAAACCATTTTCAGAAGATTTACTCGATGCAATGAAACGTTTATGGGCTGATTCT GGTGTAC AAGAATGTTTTGCACGATCAAATGAATATCAATTAAATGATTCAGCAAAATATTTTCTTGATGATTTGGATCGTCTTGGTGCTAAAGATTATATGCCAACAGAACAAGATATTCTTAGAACTCGTGTTAAAACAACTGGTATTGTGGAAGTACATTTTCAATTTAAAAATATGAATTTCAAACTTTTTGATGTGGGTGGACAACGATCGGAACGTAAAAAATGGATCCATTGCTTTGAAGATGTGACAGCAATTATTTTCTGTGTCGCTATGAGTGAATACGATCAAGTGTTACATGAAGATGAAACAACAAATCGTATGCAAGAATCATTAAAGTTATTCGATTCAATCTGTAATAATAAATGGTTCACTGATACAAGTATTATTTTATTTTTAAATAAAAAAGATCTATTCGAAGAGAAAATTAAACGTTCCCCGTTGACTATTTGTTTCCCAGAATATCCAGGTAAACAAACATATGAAGAAGCAGCCATTTATATTCAAGCGTCATTCGAANNGAAAAACCGATCACCTAACAAAGAAATTTATTGTCATCAGACATGTGCAACTGATACAAATAATATTCAGTTTGTGTTCGACGCTGTTACCGATGTGATTATAGCAAATAATCTGAAAGGATGTGGTTTGTATTAATTGACTGATTCGTTTATATATATGTTTGTTTGTTTGTTTATTCTCTTTGGTTCTATGTTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AI976254             [                                                                                                                                                                                                                                                                                                                                                                              CCTAGATTTTGATTGTTAACATTAGTTTATTGTAAATTGGGAAACATTTTTTTCATTCTGGAATCAATAATATTCAAAATTATTAGATAGGAGAAGTTCACAACTCCTTTAGATCATTAATTTTTGTGAAAGGAATTTATTTTTACCATTATATACCATTATATTAAAGGATTGAAATATAATCGGATAGTAAAAATATCATTTTCATAAATCTATATATACAATAATTAATACCTTATTAATATATACAAATGGGTTGTACA CTATCTAAAGAAGAGCGAGATGCTCTTGAACAAAGTCGTAATATAGATAAAAAACTTAAAGAAGATGGAATGCAAGCTGCAAAAGATGTGAAACTACTTCTTTTGGGTGCCGGTGAATCAGGAAAGAGCACAATCGTCAAACAAATGAAAATTATTCATGAAGGTGGATTTACACAAGAAGATAATAAACAGTA TAAACCGGTGGTTTATAGTAATACCATTCAATCGATGGTTGCAATTCTCAGAGCAATGAACACTCTTGGAATTCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BF936746             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCTTATTAATATATACAAATGGGTTGTACACCTATCTAAAGAAGAGCGAGATGCTCTTGAACAAAGTCGTAATATAGATAAAAAACTTAAAGAAGATGGAATGCAAGCTGCAAAAGATGTGAAACTACTTCTTTTGGGTGCCGGTGAATCAGGAAAGAGCACAATCGTCAAACAAATGAAAATTATTCATGAAGGTGGATTTACACAAGAAGATAATAAACAGTATTAAACCGGTGGTTTATAGTAATACCATTCAATCGATGGTTGCAATTCTCAGAGCAATGAACACTCTTGGAATTCAATTCGGTGATAGTGAACAAGGAGCAGAAGATGCTCGTATTGTTTGTGATGTTATCCAAGCTATGGAAGATACAAAACCATTTTCAGAAGATTTACTCGATGCAATGAAACGTTTATGGGCTGATTCTGGGTGTACAAAGAATGTTTTGCACGATCAAATGAATATCAATTAAATGATTCAGCAAAATATTTTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AI975563             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GATGCTCTTGAACAAAGTCGTAATATAGATAAAAAACTTAAAGAAGATGGAATGCAAGCTGCAAAAGATGTGAAACTACTTCTTTTGGGTGCCGGTGAATCAGGAAAGAGCACAATCGTCAAACAAATGAAAATTATTCATGAAGGTGGATTTACACAAGAAGATAATAAACAGTA TAAACCGGTGGTTTATAGTAATACCATTCAATCGATGGTTGCAATTCTCAGAGCAATGAACACTCTTGGAATTCAATTCGGTGATAGTGAACAAGGAGCAGAAGATGCTCGTATTGTTTGTGATGTTATCCAAGCTATGGAAGATACAAAACCATTTTCAGAAGATTTACTCGATGCAATGAAACGTTTATGGGCTGATTCT GGTGTAC AAGAATGTTTTGCACGATCAAATGAATATCAATTAAATGATTCAGCAAAATATTTTCTTGATGATTTGGATCGTCTTGGTGCTAAAGATTATATGCCAACAGAACAAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AI067213             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGAACAAAGTCGTAATATAGATAAAAAACTTAAAGAAGATGGAATGCAAGCTGCAAAAGATGTGAAACTACTTCTTTTGGGTGCCGGTGAATCAGGAAAGAGCACAATCGTCAAACAAATGACAATTATTCATGAAGGTGGATTTACACAAGAAGATAATAAACAGTA TAAACCGGTGGTTTATAGTAATACCATTCAATCGATGGTTGCAATTCTCAGAGCAATGAACACTCTTGGAATTCAATTCGGTGATAGTGAACAAGGAGCAGAAGATGCTCGTATTGTTTGTGATGTTATCCAAGCTATGGAAGATACAAAACCATTTTCAGAAGATTTACTCGATGCAATGAAACGTTTATGGGCTGATTCT GGTGTAC AAGAATGTTTTGCACGATCAAATGAATATCAATTAAATGATTCAGCAAAATATTTTCTTGATGATTTGGATCGTCTTGGTGCTAAAGATTATATGCCAACAGAACAAGATATTCTTAGAACTCGTGTTAAAACAACTGGTATTGTGGAAGTACATTTTCAATTTAAAAATATGAATTTCAAACTTTTTGATGTGGGTGGACAACGATCGGAACGTAAAAAATGGATCCATTGCTTTGAAGATGTGACAGCAATTATTTTCTGTGTCGCTATGAGTGAATACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AI067238             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGAACAAAGTCGTAATATAGATAAAAAACTTAAAGAAGATGGAATGCAAGCTGCAAAAGATGTGAAACTACTTCTTTTGGGTGCCGGTGAATCAGGAAAGAGCACAATCGTCAAACAAATGAAAATTATTCATGAAGGTGGATTTACACAAGAAGATAATAAACAGTA TAAACCGGTGGTTTATAGTAATACCATTCAATCGATGGTTGCAATTCTCAGAGCAATGAACACTCTTGGAATTCAATTCGGTGATAGTGAACAAGGAGCAGAAGATGCTCGTATTGTTTGTGATGTTATCCAAGCTATGGAAGATACAAAACCATTTTCAGAAGATTTACTCGATGCAATGAAACGTTTATGGGCTGATTCT GGTGTAC AAGAATGTTTTGCACGATCAAATGAATATCAATTAAATGATTCAGCAAAATATTTTCTTGATGATTTGGATCGTCTTGGTGCTAAAGATTATATGCCAACAGAACAAGATATTCTTAGAACTCGTGTTAAAACAACTGGTATTGTGGAAGTACATTTTCAATTTAAAAATATGAATTTCAAACTTTTTGATGTGGGTGGACAACGATCGGAACGTAAAAAATGGATCCATTGCTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AI067644             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGTCGTAATATAGATAAAAAACTTAAAGAAGATGGAATGCAAGCTGCAAAAGATGTGAAACTACTTCTTTTGGGTGCCGGTGAATCAGGAAAGAGCACAATCGTCAAACAAATGAAAATTATTCATGAAGGTGGATTTACACAAGAAGATAATAAACAGTA TAAACCGGTGGTTTATAGTAATACCATTCAATCGATGGTTGCAATTCTCAGAGCAATGAACACTCTTGGAATTCAATTCGGTGATAGTGAACAAGGAGCAGAAGATGCTCGTATTGTTTGTGATGTTATCCAAGCTATGGAAGATACAAAACCATTTTCAGAAGATTTACTCGATGCAATGAAACGTTTATGGGCTGATTCT GGTGTAC AAGAATGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AI067905             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGTCGTAATATAGATAAAAAACTTAAAGAAGATGGAATGCAAGCTGCAAAAGATGTGAAACTACTTCTTTTGGGTGCCGGTGAATCAGGAAAGAGCACAATCGTCAAACAAATGAAAATTATTCATGAAGGTGGATTTACACAAGAAGATAATAAACAGTA TAAACCGGTGGCTTATAGTAATACCATTCAATCGATGGTTGCAATTCTCAGAGCAATGAACACTCTTGGAATTCAATTCGGTGATAGTGAACAAGGAGCAGAAGATGCTCGTATTGTTTGTGATGTTATCCAAGCTATGGAAGATACAAAACCATTTTCAGAAGATTTACTCGATGCAATGAAACGTTTATGGGCTGATTCT GGTGTAC AAGAATGTTTTGCACGATCAAATGAATATCAATTAAATGATTCAGCAAAATATTTTCTTGATGATTTGGATCGTCTTGGTGCTAAAGATTATATGCCAACAGAACAAGATATTCTTAGAACTCGTGTTAAAACAACTGGTATTGTGGAAGTACATTTTCAATTTAAAAATATGAATTTCACACTTTTTGATGTGGGTGGACAACGAatc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AI067377             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGTCGTAATATAGATAAAAAACTTAAAGAAGATGGAATGCAAGCTGCAAAAGATGTGAAACTACTTCTTTTGGGTGCCGGTGAATCAGGAAAGAGCACAATCGTCAAACAAATGAAAATTATTCATGAAGGTGGATTTACACAAGAAGATAATAAACAGTA TAAACCGGTGGTTTATAGTAATACCATTCAATCGATGGTTGCAATTCTCAGAGCAATGAACACTCTTGGAATTCAATTCGGTGATAGTGAACAAGGAGCAGAAGATGCTCGTATTGTTTGTGATGTTATCCAAGCTATGGAAGATACAAAACCATTTTCAGAAGATTTACTCGATGCAATGAAACGTTTATGGGCTGATTCT GGTGTAC AAGAATGTTTTGCACGATCAAATGAATATCAATTAAATGATTCAGCAAAATATTTTCTTGATGATTTGGATCGTCTTGGTGCTAAAGATTATATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AI067491             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGTCGTAATATAGATAAAAAACTTAAAGAAGATGGAATGCAAGCTGCAAAAGATGTGAAACTACTTCTTTTGGGTGCCGGTGAATCAGGAAAGAGCACAATCGTCAAACAAATGAAAATTATTCATGAAGGTGGATTTACACAAGAAGATAATAAACAGTA TAAACCGGTGGTTTATAGTAATACCATTCAATCGATGGTTGCAATTCTCAGAGCAATGAACACTCTTGGAATTCAATTCGGTGATAGTGAACAAGGAGCAGAAGATGCTCGTATTGTTTGTGATGTTATCCAAGCTATGGAAGATACAAAACCATTTTCAGAAGATTTACTCGATGCAATGAAACGTTTATGGGCTGATTCT GGTGTAC AAGAATGTTTTGCACGATCANATGAATATCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AI067667             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGTCGTAATATAGATAAAAAACTTAAAGAAGATGGAATGCAAGCTGCAAAAGATGTGAAACTACTTCTTTTGGGTGCCGGTGAATCAGGAAAGAGCACAATCGTCAAACAAATGAAAATTATTCATGAAGGTGGATTTACACAAGAAGATAATAAACAGTA TAAACCGGTGGTTTATAGTAATACCATTCAATCGATGGTTGCAATTCTCAGAGCAATGAACACTCTTGGAATTCAATTCGGTGATAGTGAACAAGGAGCAGAAGATGCTCGTATTGTTTGTGATGTTATCCAAGCTATGGAAGATACAAAACCATTTTCAGAAGATTTACTCGATGCAATGAAACGTTTATGGGCTGATTCT GGTGTAC AAGAATGTTTTGCACGATCAAATGAATATCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AI976965             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCAATGAACACTCTTGGAATTCAATTCGGTGATAGTGAACAAGGAGCAGAAGATGCTCGTATTGTTTGTGATGTTATCCAAGCTATGGAAGATACAAAACCATTTTCAGAAGATTTACTCGATGCAATGAAACGTTTATGGGCTGATTCT GGTGTAC AAGAATGTTTTGCACGATCAAATGAATATCAATTAAATGATTCAGCAAAATATTTTCTTGATGATTTGGATCGTCTTGGTGCTAAAGATTATATGCCAACAGAACAAGATATTCTTAGAACTCGTGTTAAAACAACTGGTATTGTGGAAGTACATTTTCAATTTAAAAATATGAATTTCAAACTTTTTGATGTGGGTGGACAACGATCGGAACGTAAAAAATGGATCCATTGCTTTGAAGATGTGACAGCAATTATTTTCTGTGTCGCTATGAGTGAATACGATCAAGTGTTACATGAAGATGAAACAACAAATCGTATGCAAGAATCATTAAAGTTATTCGATTCAATCTGTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD082142             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          aaacTGAATACGATCAAGTGTTACATGAAGATG AATAACAAATCGTATGCAACCATCATTAAAGTTATTCGATTCAATCTGTAATAATAAATGGTTCACTGATACAAGTATTATTTTATTTTTAAATAAAAAAGATCTATTCGAAGAGAAAATTAAACGTTCCCCGTTGACTATTTGTTTCCCAGAATATCCAGGTAAACAAACATATGAAGAAGCAGCCATTTATATTCAAGCGTCATTCGAAGCGAAAAACCGATCACCTAACAAAGAAATTTATTGTCATCAGACATGTGCAACTGATACAAATAATATTCAGTTTGTGTTCGACGCTGTTACCGATGTGATTATAGCAAATAATCTGAAAGGATGTGGTTTGTATTAATTGACTGATTCGTTTATTTATATGTTTGTTTGTTTGTTTATTTTCTTT GTTCTATGTTTCCTTTCTTTGTTTTGGTGTTTGTCTATCATTATATTAGTCTGTTGATTTTGTGTATGGTTTCTTTCTGGTGCAGTTTCACTCTCAATTTATTCATTCACAGTTGAGTACATATCTTCATTTTGTTTTCGATTACTGCTTAAGAATCATGTTGTACACTTACACACTACTACTACTACTACTGATACACACATAAAGTGTGTAAACGAGTGAAAAG AAAGATGCACANTCTACAt                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AI975325             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CATTTATATTCAAGCGTCATTCGAAGCGAAAAACCGATCACCTAACAAAGAAATTTATTGTCATCAGACATGTGCAACTGATACAAATAATATTCAGTTTGTGTTCGACGCTGTTACCGATGTGATTATAGCAAATAATCTGAAAGGATGTGGTTTGTATTAATTGACTGATTCGTTTATTTATA    TGTTTGTTTGTTTATTTTCTTT GTTCTATGTTTCCTTTCTTTGTTTTGGTGTTTGTCTATCATTATATTAGTCTGTTGATTTTGTGTATGGTTTCTTTCTGGTGCAGTTTCACTCTCAATTTATTCATTCACAGTTGAGTACATATCTTCATTTTGTTTTCGATTACTGCTTAAGAATCATGTTGTACACTTACACACTACTACTACTACTACTGATACACACATAAAGTGTGTAAACGAGTGAAAAGAAAAGATGCACA TCTACAATACAGAAAGTATTTTCACAAATAACACATTATATAATGATAATCATAATAATAATATTAATCATACAATTATAATTCACATTCGTTTCTTATTTGTTGTGAAATGCTTTTCTCGATGTCTCATCTTTTCTTTGTGTTTTTTCTCTTCTGTTCCCCCCCct                                                                                                                                                                                                                                                                                        ]
[+] EMBL BF937001             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTGTTGATTTTGTGTATGGTTTCTTTCTGGTGCAGTTTCACTCTCAATTTATTCATTCACAGGTGAGTACATATCTTCATTTTGTTTTCGATTACTGCTTAAGAATCATGTTGTACACTTACACACTACTACTACTACTACTGATACACACATAAAGTGTGTAAACGAGTGAAAAGAAAAGATGCACA TCTACAATACAGAAAGTATTTTCACAAATAACACATTATATAATGATAATCATAATAATAATATTAATCATACAATTATAATTCACATTCGTTTCTTATTTGTTGTGAAATGCTTTTCTCGATGTCTCATCTTTTCTTTGTGTTTTTTCTCTTCTGTTCCCCCCCTTTTATAATCCAAAAATGAAAAGTTGTATAATCGAGTGTTTCTATGTTTCTCTTCTCCCTCAAATATTAATACTTACTTGAGATGGTTACACTTACTTAACGATTTCATAATTAGAATATACACTTTGTAATATTATAAATAACATATACAAATGAATGAAAGTGAATTTAATTGATTCTCAATGCTTAAAAATGTTGAAACAGGCAAGACAATTCCTCATCATGAATGACGATGATGCTGATGGTAGTTTCATTGAAATAAGAAATGTTTACTTCAACTAA]
[-] EMBL CD075758             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTCACAGTTGAGTACATATCTTCATTTTGTTTTCGATTACTGCTTAAGAATCATGTTGTACACTTACACACTACTACTACTACTACTGATACACACATAAAGTGTGTAAACGAGTGAAAAGAAAAGATGCACA TCTACAATACAGAAAGTATTTTCACAAATAACACATTATATAATGATAATCATAATAATAATATTAATCATACAATTATAATTCACATTCGTTTCTTATTTGTTGTGAAATGCTTTTCTCGATGTCTCATCTTTTCTTTGTGTTTTTTCTCTTCTGTTCCCCCCCTTTTATAATCCAAAAATGAAAAGTTGTATAATCGAGTGTTTCTATGTTTCTCTTCTCCCTCAAATATTAATACTTACTTGAGATGGTTACACTTACTTAACGATTTCATAATTAGAATATACACTTTGTAATATTATAAATAACATATACAAATGAATGAAAGTGAATTTAATTGATTCTCAATGCTTAAAAATGTTGAAACAGGCAAGACAATTCCTCATCATGAATGACGATGATGCTGATGGTAGTTTCATTGAAATAAGAAATGTTTACTTCAAC   ]




>consensus_10498#0
TATCGATCAGATAGATAGTTGAATTTTTCCACATTCCTTTTAAAAAATATGGATAAAAGA
AGTATAGACATATATAGATGACCAATGAGATTTTTCCTATTTAGTTTAGATCTCTGCCTT
ATTGAATAAATTAAAATAACCCGGGCCCACTCACTACTAATTGAAGTATATTTTATGAAC
ACACACACACGTACACACATTATATATACACACACAAACAAAATCATTCATTTTTGTAAA
TGAATGTATATAATCTATATATTTGATACATTCATAGATGATATTGGGGTTGTGTCTTGT
TTCTTAGGGAGTCTATATACCATTCTCCCATATATATATATATAGTATAGTTTTTNTGTG
AGTAAACCTAGATTTTGATTGTTAACATTAGTTTATTGTAAATTGGGAAACATTTTTTTC
ATTCTGGAATCAATAATATTCAAAATTATTAGATAGGAGAAGTTCACAACTCCTTTAGAT
CATTAATTTNTGTGAAAGGAATTTATTTTTACCATTATATACCATTATATTAAAGGATTG
AAATATAATCGGATAGTAAAAATATCATTTTCATAAATCTATATATACAATAATTAATAC
CTTATTAATATATACAAATGGGTTGTACACTATCTAAAGAAGAGCGAGATGCTCTTGAAC
AAAGTCGTAATATAGATAAAAAACTTAAAGAAGATGGAATGCAAGCTGCAAAAGATGTGA
AACTACTTCTTTTGGGTGCCGGTGAATCAGGAAAGAGCACAATCGTCAAACAAATGAAAA
TTATTCATGAAGGTGGATTTACACAAGAAGATAATAAACAGTATAAACCGGTGGTTTATA
GTAATACCATTCAATCGATGGTTGCAATTCTCAGAGCAATGAACACTCTTGGAATTCAAT
TCGGTGATAGTGAACAAGGAGCAGAAGATGCTCGTATTGTTTGTGATGTTATCCAAGCTA
TGGAAGATACAAAACCATTTTCAGAAGATTTACTCGATGCAATGAAACGTTTATGGGCTG
ATTCTGGTGTACAAGAATGTTTTGCACGATCAAATGAATATCAATTAAATGATTCAGCAA
AATATTTTCTTGATGATTTGGATCGTCTTGGTGCTAAAGATTATATGCCAACAGAACAAG
ATATTCTTAGAACTCGTGTTAAAACAACTGGTATTGTGGAAGTACATTTTCAATTTAAAA
ATATGAATTTCAAACTTTTTGATGTGGGTGGACAACGATCGGAACGTAAAAAATGGATCC
ATTGCTTTGAAGATGTGACAGCAATTATTTTCTGTGTCGCTATGAGTGAATACGATCAAG
TGTTACATGAAGATGAAACAACAAATCGTATGCAAGAATCATTAAAGTTATTCGATTCAA
TCTGTAATAATAAATGGTTCACTGATACAAGTATTATTTTATTTTTAAATAAAAAAGATC
TATTCGAAGAGAAAATTAAACGTTCCCCGTTGACTATTTGTTTCCCAGAATATCCAGGTA
AACAAACATATGAAGAAGCAGCCATTTATATTCAAGCGTCATTCGAAGCGAAAAACCGAT
CACCTAACAAAGAAATTTATTGTCATCAGACATGTGCAACTGATACAAATAATATTCAGT
TTGTGTTCGACGCTGTTACCGATGTGATTATAGCAAATAATCTGAAAGGATGTGGTTTGT
ATTAATTGACTGATTCGTTTATTTATATGTTTGTTTGTTTGTTTATTTTCTTTGTTCTAT
GTTTCCTTTCTTTGTTTTGGTGTTTGTCTATCATTATATTAGTCTGTTGATTTTGTGTAT
GGTTTCTTTCTGGTGCAGTTTCACTCTCAATTTATTCATTCACAGTTGAGTACATATCTT
CATTTTGTTTTCGATTACTGCTTAAGAATCATGTTGTACACTTACACACTACTACTACTA
CTACTGATACACACATAAAGTGTGTAAACGAGTGAAAAGAAAGATGCACATCTACAATAC
AGAAAGTATTTTCACAAATAACACATTATATAATGATAATCATAATAATAATATTAATCA
TACAATTATAATTCACATTCGTTTCTTATTTGTTGTGAAATGCTTTTCTCGATGTCTCAT
CTTTTCTTTGTGTTTTTTCTCTTCTGTTCCCCCCCTTTTATAATCCAAAAATGAAAAGTT
GTATAATCGAGTGTTTCTATGTTTCTCTTCTCCCTCAAATATTAATACTTACTTGAGATG
GTTACACTTACTTAACGATTTCATAATTAGAATATACACTTTGTAATATTATAAATAACA
TATACAAATGAATGAAAGTGAATTTAATTGATTCTCAATGCTTAAAAATGTTGAAACAGG
CAAGACAATTCCTCATCATGAATGACGATGATGCTGATGGTAGTTTCATTGAAATAAGAA
ATGTTTACTTCAACTAA

consensusID : consensus_10498#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 418
fasta sequence

                              [GGGGTTGTGTCTTGTTTCTTAGGGAATCTATATACCATTCTCCCATATATATATATATAGTATAGTTTTTTTTTTATTGTAAATTGGGAAACATTTTTTTCATTCTGGAATCAATAATATTCAAAATTATTAGATAGGAGAAGTTCACAACTCCTTTAGATCATTAATTTTTGTGAAAGGAATTTATTTTTACCATTATATACCATTATATTAAAGGATTGAAATATAATCGGATAGTAAAAATATCATTTTCATAAATCTATATATACAATAATTAATACCTTATTAATATATACAAATGGGTTGTACACTATCTAAAGAAGAGCGAGATGCTCCTGAACAAAGTCGTAATATAGATAAAAAACTTAAAGAAGATGGAATGCAAGCTGCAAAAGATGTGAAACTACTTCTTTTGGGT]

[-] EMBL CD133338             [GGGGTTGTGTCTTGTTTCTTAGGGAATCTATATACCATTCTCCCATATATATATATATAGTATAGTTTTTTTTTTATTGTAAATTGGGAAACATTTTTTTCATTCTGGAATCAATAATATTCAAAATTATTAGATAGGAGAAGTTCACAACTCCTTTAGATCATTAATTTTTGTGAAAGGAATTTATTTTTACCATTATATACCATTATATTAAAGGATTGAAATATAATCGGATAGTAAAAATATCATTTTCATAAATCTATATATACAATAATTAATACCTTATTAATATATACAAATGGGTTGTACACTATCTAAAGAAGAGCGAGATGCTCCTGAACAAAGTCGTAATATAGATAAAAAACTTAAAGAAGATGGAATGCAAGCTGCAAAAGATGTGAAACTACTTCTTTTGGGT]




>consensus_10498#1
GGGGTTGTGTCTTGTTTCTTAGGGAATCTATATACCATTCTCCCATATATATATATATAG
TATAGTTTTTTTTTTATTGTAAATTGGGAAACATTTTTTTCATTCTGGAATCAATAATAT
TCAAAATTATTAGATAGGAGAAGTTCACAACTCCTTTAGATCATTAATTTTTGTGAAAGG
AATTTATTTTTACCATTATATACCATTATATTAAAGGATTGAAATATAATCGGATAGTAA
AAATATCATTTTCATAAATCTATATATACAATAATTAATACCTTATTAATATATACAAAT
GGGTTGTACACTATCTAAAGAAGAGCGAGATGCTCCTGAACAAAGTCGTAATATAGATAA
AAAACTTAAAGAAGATGGAATGCAAGCTGCAAAAGATGTGAAACTACTTCTTTTGGGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10498#0      TATCGATCAGATAGATAGTTGAATTTTTCCACATTCCTTTTAAAAAATATGGATAAAAGA 60
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      AGTATAGACATATATAGATGACCAATGAGATTTTTCCTATTTAGTTTAGATCTCTGCCTT 120
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      ATTGAATAAATTAAAATAACCCGGGCCCACTCACTACTAATTGAAGTATATTTTATGAAC 180
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      ACACACACACGTACACACATTATATATACACACACAAACAAAATCATTCATTTTTGTAAA 240
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      TGAATGTATATAATCTATATATTTGATACATTCATAGATGATATTGGGGTTGTGTCTTGT 300
consensus_10498#1      ---------------------------------------------GGGGTTGTGTCTTGT 15
                                                                    ***************

consensus_10498#0      TTCTTAGGGAGTCTATATACCATTCTCCCATATATATATATATAGTATAGTTTTTNTGTG 360
consensus_10498#1      TTCTTAGGGAATCTATATACCATTCTCCCATATATATATATATAGTATAGTTTTTTT--- 72
                       ********** ******************************************** *   

consensus_10498#0      AGTAAACCTAGATTTTGATTGTTAACATTAGTTTATTGTAAATTGGGAAACATTTTTTTC 420
consensus_10498#1      -------------------------------TTTATTGTAAATTGGGAAACATTTTTTTC 101
                                                      *****************************

consensus_10498#0      ATTCTGGAATCAATAATATTCAAAATTATTAGATAGGAGAAGTTCACAACTCCTTTAGAT 480
consensus_10498#1      ATTCTGGAATCAATAATATTCAAAATTATTAGATAGGAGAAGTTCACAACTCCTTTAGAT 161
                       ************************************************************

consensus_10498#0      CATTAATTTNTGTGAAAGGAATTTATTTTTACCATTATATACCATTATATTAAAGGATTG 540
consensus_10498#1      CATTAATTTTTGTGAAAGGAATTTATTTTTACCATTATATACCATTATATTAAAGGATTG 221
                       ********* **************************************************

consensus_10498#0      AAATATAATCGGATAGTAAAAATATCATTTTCATAAATCTATATATACAATAATTAATAC 600
consensus_10498#1      AAATATAATCGGATAGTAAAAATATCATTTTCATAAATCTATATATACAATAATTAATAC 281
                       ************************************************************

consensus_10498#0      CTTATTAATATATACAAATGGGTTGTACACTATCTAAAGAAGAGCGAGATGCTCTTGAAC 660
consensus_10498#1      CTTATTAATATATACAAATGGGTTGTACACTATCTAAAGAAGAGCGAGATGCTCCTGAAC 341
                       ****************************************************** *****

consensus_10498#0      AAAGTCGTAATATAGATAAAAAACTTAAAGAAGATGGAATGCAAGCTGCAAAAGATGTGA 720
consensus_10498#1      AAAGTCGTAATATAGATAAAAAACTTAAAGAAGATGGAATGCAAGCTGCAAAAGATGTGA 401
                       ************************************************************

consensus_10498#0      AACTACTTCTTTTGGGTGCCGGTGAATCAGGAAAGAGCACAATCGTCAAACAAATGAAAA 780
consensus_10498#1      AACTACTTCTTTTGGGT------------------------------------------- 418
                       *****************                                           

consensus_10498#0      TTATTCATGAAGGTGGATTTACACAAGAAGATAATAAACAGTATAAACCGGTGGTTTATA 840
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      GTAATACCATTCAATCGATGGTTGCAATTCTCAGAGCAATGAACACTCTTGGAATTCAAT 900
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      TCGGTGATAGTGAACAAGGAGCAGAAGATGCTCGTATTGTTTGTGATGTTATCCAAGCTA 960
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      TGGAAGATACAAAACCATTTTCAGAAGATTTACTCGATGCAATGAAACGTTTATGGGCTG 1020
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      ATTCTGGTGTACAAGAATGTTTTGCACGATCAAATGAATATCAATTAAATGATTCAGCAA 1080
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      AATATTTTCTTGATGATTTGGATCGTCTTGGTGCTAAAGATTATATGCCAACAGAACAAG 1140
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      ATATTCTTAGAACTCGTGTTAAAACAACTGGTATTGTGGAAGTACATTTTCAATTTAAAA 1200
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      ATATGAATTTCAAACTTTTTGATGTGGGTGGACAACGATCGGAACGTAAAAAATGGATCC 1260
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      ATTGCTTTGAAGATGTGACAGCAATTATTTTCTGTGTCGCTATGAGTGAATACGATCAAG 1320
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      TGTTACATGAAGATGAAACAACAAATCGTATGCAAGAATCATTAAAGTTATTCGATTCAA 1380
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      TCTGTAATAATAAATGGTTCACTGATACAAGTATTATTTTATTTTTAAATAAAAAAGATC 1440
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      TATTCGAAGAGAAAATTAAACGTTCCCCGTTGACTATTTGTTTCCCAGAATATCCAGGTA 1500
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      AACAAACATATGAAGAAGCAGCCATTTATATTCAAGCGTCATTCGAAGCGAAAAACCGAT 1560
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      CACCTAACAAAGAAATTTATTGTCATCAGACATGTGCAACTGATACAAATAATATTCAGT 1620
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      TTGTGTTCGACGCTGTTACCGATGTGATTATAGCAAATAATCTGAAAGGATGTGGTTTGT 1680
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      ATTAATTGACTGATTCGTTTATTTATATGTTTGTTTGTTTGTTTATTTTCTTTGTTCTAT 1740
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      GTTTCCTTTCTTTGTTTTGGTGTTTGTCTATCATTATATTAGTCTGTTGATTTTGTGTAT 1800
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      GGTTTCTTTCTGGTGCAGTTTCACTCTCAATTTATTCATTCACAGTTGAGTACATATCTT 1860
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      CATTTTGTTTTCGATTACTGCTTAAGAATCATGTTGTACACTTACACACTACTACTACTA 1920
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      CTACTGATACACACATAAAGTGTGTAAACGAGTGAAAAGAAAGATGCACATCTACAATAC 1980
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      AGAAAGTATTTTCACAAATAACACATTATATAATGATAATCATAATAATAATATTAATCA 2040
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      TACAATTATAATTCACATTCGTTTCTTATTTGTTGTGAAATGCTTTTCTCGATGTCTCAT 2100
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      CTTTTCTTTGTGTTTTTTCTCTTCTGTTCCCCCCCTTTTATAATCCAAAAATGAAAAGTT 2160
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      GTATAATCGAGTGTTTCTATGTTTCTCTTCTCCCTCAAATATTAATACTTACTTGAGATG 2220
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      GTTACACTTACTTAACGATTTCATAATTAGAATATACACTTTGTAATATTATAAATAACA 2280
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      TATACAAATGAATGAAAGTGAATTTAATTGATTCTCAATGCTTAAAAATGTTGAAACAGG 2340
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      CAAGACAATTCCTCATCATGAATGACGATGATGCTGATGGTAGTTTCATTGAAATAAGAA 2400
consensus_10498#1      ------------------------------------------------------------
                                                                                   

consensus_10498#0      ATGTTTACTTCAACTAA 2417
consensus_10498#1      -----------------