cluster # 10499

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Schistosoma mansoni
cluster # 10499 cluster # 10499 Sequences # 17 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10499#0 length = 1053 sequences # 15

consensus_10499#1 length = 499 sequences # 1
consensus_10499#2 length = 310 sequences # 1

consensusID : consensus_10499#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1053
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTACGATAAGAACGATTACATAGCATTATATTAAATATACCAGTTAGCGATAAACTACTGAACAGATCACAAGAATGATGTGGTTGAAGTTTACTCGGAGTCCGAAGATGATTCGGACTCACTTGCGCTTGAGTCTTCTGACTCCTTTGA-GTTTTCCCTTTTAATCTTCATAGACTTTTCTGCAGACTGCTCTGAGTGATTTGATGATGAGTCGCTGTCGGATTTTTCTTCCGGGCTATTGGCTTTGGAAGTAACAGACGTTTTTCGAGAATCTAA-TGGAGAGTGTTTAGGTGAACTGCCATTCGAATCTGTCTTCGACTTCTTGGCCTCAGATTCTCCGGATGATGAGCTTTCAGAATCCTTTCGAGCACTAGAAACCGAACGTT-TTGACGAATCACTATCCGACTCTGTCTTGGA-TTTTTTGGCTTCGGATTCTCCAGACGAGTCTTCCGAACTTTCGTCAGAGTCTTTAGAAAGTCTTGCTTCGCCCTCAACATCCTTCGCTGACAAGGGATTTATTTTTTCTTCTTCCTCATTTCCCGAATCTTCATCAGACGTTTTTCTTTGGTGTTCTGTGGAATCGCCTTCATTTTCATCAACTTTCTCTTCAAAACTTTTATGTAAAGTCTTTTCTTTTTGACCTTTATCCTCTTCTTCTTCAGCAGCTTCACTGTTTTCTTCCTCCTTAGGAATATCAGGCTTATCTTCATCGACCGAAGACTCCTTAGCCTTGTCCTCGTCCTCCTCCTCACTCTCAGCCTGAAATTTAACGTCACAAATTGAGTCTGAGTAAGTTTTCTACAGGTTTAATTCATGCAGCACATGCAAAATAAGGCTAAGCAATCATGCGAGATGACCTAAGGCGCAACTGGTACCTCACTGGCGCTGCTACCCATCAATGCCGAGAACGACTTAGGTTTTTCTCCAGGCAATTTTAGAAAAGATTCTAGTTCTTCCATTTCCACGGCCTCGTAAAATTCCTCATAGCCCTGAAAAGATGAAAGTGAGAGGAATACTAACTCCGACCTCGTGCCG]

[+] EMBL AI395433             [TTTTTTTTTTTTTTTTTTTTACGATAAGAACGATTACATAGCATTATATTAAATATACCAGTTAGCGATAAACTACTGAACAGATCACAAGAATGATGTGGTTGAAGTTTACTCGGAGTCCGAAGATGATTCGGACTCACTTGCGCTTGAGTCTTCTGACTCCTTTGA GTTTTCCCTTTTAATCTTCATAGACTTTTCTGCAGACTGCTCTGAGTGATTTGATGATGAGTCGCTGTCGGATTTTTCTTCCGGGCTATTGGCTTTGGAAGTAACAGACGTTTTTCGAGAATCTAA TGGAGAGTGTTTAGGTGAACTGCCATTCGAATCTGTCTTCGACTTCTTGGCCTCAGATTCTCCGGATGATGAGCTTTCAGAATCCTTTCGAGCACTAGAAACCAAACGTT TTGACGAATCACTATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD073518             [                                                TTAAATATACCAGTTAGCGATAAACTACTGAACAGATCACAAGAATGATGTGGTTGAAGTTTACTCGGAGTCCGAAGATGATTCGGACTCACTTGCGCTTGAGTCTTCTGACTCCTTTGA GTTTTCCCTTTTAATCTTCATAGACTTTTCTGCAGACTGCTCTGAGTGATTTGATGATGAGTCGCTGTCGGATTTTTCTTCCGGGCTATTGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD136773             [                                                          CAGTTAGCGATAAACTACTGAACAGATCACAAGAATGATGTGGTTGAAGTTTACTCGGAGTCCGAAGATGATTCGGACTCACTTGCGCTTGAGTCTTCTGACTCCTTTGA GTTTTCCCTTTTAATCTTCATAGACTTTTCTGCAGACTGCTCTGAGTGATTTGATGATGAGTTGCTGTCGGATTTTTCTTCCGGGCTATTGGCTTTGGAAGTAACAGACGTTTTTCGAGAATCTAA TGGAGAGTGTTTAGGTGAACTGCCATTCGAATCTGTCTTCGACTTCTTGGCCTCAGATTCTCCGGATGATGAGCTTTCAGAATCCTTTCGAGCACTAGAAACCGAACGTT TTGACGAATCACTATCCGACTCTGTCTTGGATTTTTTTGGCTTCGGATTCTCCAGACGAGTCTTCCGAACTTTCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD140675             [                                                                                                      TGAAGTTTACTCGGAGTCCGAAGATGATTCGGACTCACTTGCGCTTGAGTCTTCTGACTCCTTTGA GTTTTCCCTTTTAATCTTCATAGACTTTTCTGCAGACTGCTCTGAGTGATTTGATGATGAGTTGCTGTCGGATTTTTCTTCCGGGCTATTGGCTTTGGAAGTAACAGACGTTTTTCGAGAATCTAA TGGAGAGTGTTTAGGTGAACTGCCATTCGAATCTGTCTTCGACTTCTTGGCCTCAGATTCTCCGGATGATGAGCTTTCAGAATCCTTTCGAGCACTAGAAACCGAACGTT TCGACGACTCACTATCCGACTCTGTCTTGGA TTTTTTGGCTTCGGATTCTCCAGACGAGTCTTCCGAACTTTCGTCAGAGTCTTTAGAAAGTCTTGCTTCGCCCTCAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD196627             [                                                                                                      TGAAGTTTACTCGGAGTCCGAAGATGATTCGGACTCACTTGCGCTTGAGTCTTCTGACTCCTTTGA GTTTTCCCTTTTAATCTTCATAGACTTTTCTGCAGACTGCTCTGAGTGATTTGATGATGAGTCGCTGTCGGATTTTTCTTCCGGGCTATTGGCTTTGGAAGTAACAGACGTTTTTCGAGAATCTAA TGGAGAGTGTTTAGGTGAACTGCCATTCGAATCTGTCTTCGACTTCTTGGCCTCAGATTCTCCGGATGATGAGCTTTCAGAATCCTTTCGAGCACTAGAAACCGAACGTT TTGACGAATCACTATCCGACTCTGTCTTGGA TTTTTTGGCTTCGGATTCTCCAGACGAGTCTTCCGAACTTTCGTCAGAGTCTTTAGAAAGTCTTGCTTCGCCCTCAACATCCTTCGCTGACAAGGGATTTATTTTTTCTTCTTCa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD196745             [                                                                                                      TGAAGTTTACTCGGAGTCCGAAGATGATTCGGACTCACTTGCGCTTGAGTCTTCTGACTCCTTTGA GTTTTCCCTTTTAATCTTCATAGACTTTTCTGCAGACTGCTCTGAGTGATTTGATGATGAGTCGCTGTCGGATTTTTCTTCCGGGCTATTGGCTTTGGAAGTAACAGACGTTTTTCGAGAATCTAA TGGAGAGTGTTTAGGTGAACTGCCATTCGAATCTGTCTTCGACTTCTTGGCCTCAGATTCTCCGGATGATGAGCTTTCAGAATCCTTTCGAGCACTAGAAACCGAACGTT TTGACGAATCACTATCCGACTCTGTCTTGGA TTTTTTGGCTTCGGATTCTCCAGACGAGTCTTCCGAACTTTCGTCAGAGTCTTTAGAAAGTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD197117             [                                                                                                       GAAGTTTACTCGGAGTCCGAAGATGATTCGGACTCACTTGCGCTTGAGTCTTCTGACTCCTTTGA GTTTTCCCTTTTAATCTTCATAGACTTTTCTGCAGACTGCTCTGAGTGATTTGATGATGAGTCGCTGTCGGATTTTTCTTCCGGGCTATTGGCTTTGGAAGTAACAGACGTTTTTCGAGAATCTAA TGGAGAGTGTTTAGGTGAACTGCCATTCGAATCTGTCTTCGACTTCTTGGCCTCAGATTCTCCGGATGATGAGCTTTCAGAATCCTTTCGAGCACTAGAAACCGAACGTT TTGACGAATCACTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD140708             [                                                                                                       GAAGTTTACTCGGAGTCCGAAGATGATTCGGACTCACTTGCGCTTGAGTCTTCTGACTCCTTTGAGGTTTTCCCTTTTAATCTTCATAGACTTTTCGGCAGACTGCTCTGAGTGATTTGATGATGAGTTGCTGTCGGATTTTTCTTCCGGGCTATTGGCTTTGGAAGTAACAGACGTTTTTCGAGAATCTAACTGGAGAGTGTTTAGGTGAACTGCCATTCGAATCTGTCTTCGACTTCTTGGCCTCAGATTCTCCGGATGATGAGCTTTCAGAATCCTTTCGAGCACTAGAAACCGAACGTTCTTGACGAATCACTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD140514             [                                                                                                                    AGTCCGAAGATGATTCGGACTCACTTGCGCTTGAGTCTTCTGACTCCTTTGA GTTTTCCCTTTTAATCTTCATAGACTTTTCTGCAGACTGCTCTGAGTGATTTGATGATGGGTTGCTGTCGGATTTTTCTTCCGGGCTATTGGCTTTGGAAGTAACAGACGTTTTTCGAGAATCTAA TGGAGAGTGTTTAGGTGAACTGCCATTCGAATCTGTCTTCGACTTCTTGGCCTCAGATTCTCCGGATGATGAGCTTTCAGAATCCTTTCGAGCACTAGAAACCGAACGTT TTGACGAATCACTATCCGACTCTGTCTTGGA TTTTTTGGCTTCGGATTCTCCAGACGAGTCTTCCGAACTTTCGTCAGAGTCTTTAGAAAGTCTTGCTTCGCCCTCAACATCCTTCGCTGACAAGGGATTTATTTTTTCTTCTTCCTCATTTCCCGAATCTTCATCAGACGTTTTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD144976             [                                                                                                                                                                                                                               TGATGAGTTGCTGTCGGATTTTTCTTCCGGGCTATTGGCTTTGGAAGTAACAGACGTTTTTCGAGAATCTAA TGGAGAGTGTTTAGGTGAACTGCCATTCGAATCTGTCTTCGACTTCTTGGCCTCAGATTCTCCGGGTGATGAGCTTTCAGAATCCTTTCGAGCACTAGAAACCGAACGTT TTGACGAATCACTATCCGACTCTGTCTTGGA TTTTTTGGCTTCGGATTCTCCAGACGAGTCTTCCGAACTTTCGTCAGAGTCTTTAGAAAGTCTTGCTTCGCCCTCAACATCCTTCGCTGACAAGGGATTTATTTTTTCTTCTTCCTCATTTCCCGAATCTTCATCAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD141064             [                                                                                                                                                                                                                                                                    GCTTTGGAAGTAACAGACGTTTTTCGAGAATCTAA TGGAGAGTGTTTAGGTGAACTGCCATTCGAATCTGTCTTCGACTTCTTGGCCTCAGATTCTCCGGATGATGAGCTTTCAGAATCCTTTCGAGCACTAGAAACCGAACGTT TTGACGAATCACTATCCGACTCTGTCTTGGA TTTTTTGGCTTCGGATTCTCCAGACGAGTCTTCCGAACTTTCGTCAGAGTCTTTAGAAAGTCTTGCTTCGCCCTCAACATCCTTCGCTGACAAGGGATTTATTTTTTCTTCTTCCTCATTTTCCG ATCTTCATCAGACGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD073519             [                                                                                                                                                                                                                                                                                                     AA TGGAGAGTGTTTAGGTGAACTGCCATTCGAATCTGTCTTCGACTTCTTGGCCTCAGATTCTCCGGATGATGAGCTTTCAGAATCCTTTCGAGCACTAGAAACCGAACGTT TTGACGAATCACTATCCGACTCTGTCTTGGA TTTTTTGGCTTCGGATTCTCCAGACGAGTCTTCCGAACTTTCGTCAGAGTCTTTAGAAAGTCTTGCTTCGCCCTCAACATCCTTCGCTGACAAGGGATTTATTTTTTCTTCTTCCTCATTTCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD194740             [                                                                                                                                                                                                                                                                                                                                        CTGTCTTCGACTTCTTGGCCTCAGATTCTCCGGATGATGAGCTTTCAGAATCCTTTCGAGCACTAGAAACCGAACGTT TTGACGAATCACTATCCGACTCTGTCTTGGA TTTTTTGGCTTCGGATTCTCCAGACGAGTCTTCCGAACTTTCGTCAGAGTCTTTAGAAAGTCTTGCTTCGCCCTCAACATCCTTCGCTGACAAGGGATTTATTTTTTCTTCTTCCTCATTTCCCGAATCTTCATCAGACGTTTTTCTTTGGTGTTCTGTGGAATCGCCTTCATTTTCATCAACTTTCTCTTCAAAACTTTTATGTAAAGTCTTTTCTTTTTGACCTTTATCCTCTTCTTCTTCAGCAGCTTCACTGTTTTCTTCCTCCTTAGGAATATCAGGCTTATCTTCATCGACCGAAGACTCCTTAGCCTTGTCCTCGTCCTCCT                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD133647             [                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTTCGGATTCTCCAGACGAGTCTTCCGAACTTTCGTCAGAGTCTTTAGAAAGTCTTGCTTCGCCCTCAACATCCTTCGCTGACAAGGGATTTATTTTTTCTTCTTCCTCATTTCCCGAATCTTCATCAGATGTTTTTCTTTGGTGTTCTGTGGAATCGCCTTCATTTTCATCAACTTTCTCTTCAAAACTTTTATGTAAAGTCTTTTCTTTTTGACCTTTATCCTCTTCTTCTTCAGCA                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD083492             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTTCAAAACTTTTATGTAAAGTCTTTTCTTTTTGACCTTTATCCTCTTCTTCTTCAGCAGCTTCACTGTTTTCTTCCTCCTTAGGAATATCAGGCTAGTCTTCATCGACCGAAGACTCCTTAGCCTTGTCCTCGTCCTCCTCCTCACTCTCAGCCTGAAATTTAACGTCACAAATTGAGTCTGAGTAAGTTTTCTACAGGTTTAATTCATGCAGCACATGCAAAATAAGGCTAAGCAATCATGCGAGATGACCTAAGGCGCAACTGGTACCTCACTGGCGCTGCTACCCATCAATGCCGAGAACGACTTAGGTTTTTCTCCAGGCAATTTTAGAAAAGATTCTAGTTCTTCCATTTCCACGGCCTCGTAAAATTCCTCATAGCCCTGAAAAGATGAAAGTGAGAGGAATACTAACTCCGACCTCGTGCCG]




>consensus_10499#0
TTTTTTTTTTTTTTTTTTTTACGATAAGAACGATTACATAGCATTATATTAAATATACCA
GTTAGCGATAAACTACTGAACAGATCACAAGAATGATGTGGTTGAAGTTTACTCGGAGTC
CGAAGATGATTCGGACTCACTTGCGCTTGAGTCTTCTGACTCCTTTGAGTTTTCCCTTTT
AATCTTCATAGACTTTTCTGCAGACTGCTCTGAGTGATTTGATGATGAGTCGCTGTCGGA
TTTTTCTTCCGGGCTATTGGCTTTGGAAGTAACAGACGTTTTTCGAGAATCTAATGGAGA
GTGTTTAGGTGAACTGCCATTCGAATCTGTCTTCGACTTCTTGGCCTCAGATTCTCCGGA
TGATGAGCTTTCAGAATCCTTTCGAGCACTAGAAACCGAACGTTTTGACGAATCACTATC
CGACTCTGTCTTGGATTTTTTGGCTTCGGATTCTCCAGACGAGTCTTCCGAACTTTCGTC
AGAGTCTTTAGAAAGTCTTGCTTCGCCCTCAACATCCTTCGCTGACAAGGGATTTATTTT
TTCTTCTTCCTCATTTCCCGAATCTTCATCAGACGTTTTTCTTTGGTGTTCTGTGGAATC
GCCTTCATTTTCATCAACTTTCTCTTCAAAACTTTTATGTAAAGTCTTTTCTTTTTGACC
TTTATCCTCTTCTTCTTCAGCAGCTTCACTGTTTTCTTCCTCCTTAGGAATATCAGGCTT
ATCTTCATCGACCGAAGACTCCTTAGCCTTGTCCTCGTCCTCCTCCTCACTCTCAGCCTG
AAATTTAACGTCACAAATTGAGTCTGAGTAAGTTTTCTACAGGTTTAATTCATGCAGCAC
ATGCAAAATAAGGCTAAGCAATCATGCGAGATGACCTAAGGCGCAACTGGTACCTCACTG
GCGCTGCTACCCATCAATGCCGAGAACGACTTAGGTTTTTCTCCAGGCAATTTTAGAAAA
GATTCTAGTTCTTCCATTTCCACGGCCTCGTAAAATTCCTCATAGCCCTGAAAAGATGAA
AGTGAGAGGAATACTAACTCCGACCTCGTGCCG

consensusID : consensus_10499#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 499
fasta sequence

                              [ACTCTCAGCCTGAAATTTAACGTCACAAATTGAGTCTGAGTAAGTTTTCTACAGGTTTAATTCATGCAGCACATGCAAAATAAGGCTAAGCAATCATGCGAGATGACCTAAGGCGCAACTGGTACCTCACAGGCGCTGCTACCCATCAATGCCGAGAACGACTTAGGTTTTTCTCCAGGCAATTTTAGAAAAGATTCTAGTTCTTCCATTTCCACGGCCTCGTAAAATTCCTCATAGCCCTGAAAAGATGAAAGTGAGAGGAATACTAACTCCGAGATATTCTTCATCGAGGAAAATGTGTGGTGGAACCAAAGGTTTCTCTTTTTTCTTTAGCTCCTCAAATAATGAACACTTTCTAGACTCATTGGAGACGTCAGAGAGGTCAACTTCTTCAAAGTCAACCTTTTTAGCATATAAGCAGTGACAGAATTAGTGCCTGTTCTTTTTTGACCTTAAGGTTTCCAGAAAGAGTACTGATGTAAACCTTCAGAACCACCTC]

[-] EMBL CD084201             [ACTCTCAGCCTGAAATTTAACGTCACAAATTGAGTCTGAGTAAGTTTTCTACAGGTTTAATTCATGCAGCACATGCAAAATAAGGCTAAGCAATCATGCGAGATGACCTAAGGCGCAACTGGTACCTCACAGGCGCTGCTACCCATCAATGCCGAGAACGACTTAGGTTTTTCTCCAGGCAATTTTAGAAAAGATTCTAGTTCTTCCATTTCCACGGCCTCGTAAAATTCCTCATAGCCCTGAAAAGATGAAAGTGAGAGGAATACTAACTCCGAGATATTCTTCATCGAGGAAAATGTGTGGTGGAACCAAAGGTTTCTCTTTTTTCTTTAGCTCCTCAAATAATGAACACTTTCTAGACTCATTGGAGACGTCAGAGAGGTCAACTTCTTCAAAGTCAACCTTTTTAGCATATAAGCAGTGACAGAATTAGTGCCTGTTCTTTTTTGACCTTAAGGTTTCCAGAAAGAGTACTGATGTAAACCTTCAGAACCACCTC]




>consensus_10499#1
ACTCTCAGCCTGAAATTTAACGTCACAAATTGAGTCTGAGTAAGTTTTCTACAGGTTTAA
TTCATGCAGCACATGCAAAATAAGGCTAAGCAATCATGCGAGATGACCTAAGGCGCAACT
GGTACCTCACAGGCGCTGCTACCCATCAATGCCGAGAACGACTTAGGTTTTTCTCCAGGC
AATTTTAGAAAAGATTCTAGTTCTTCCATTTCCACGGCCTCGTAAAATTCCTCATAGCCC
TGAAAAGATGAAAGTGAGAGGAATACTAACTCCGAGATATTCTTCATCGAGGAAAATGTG
TGGTGGAACCAAAGGTTTCTCTTTTTTCTTTAGCTCCTCAAATAATGAACACTTTCTAGA
CTCATTGGAGACGTCAGAGAGGTCAACTTCTTCAAAGTCAACCTTTTTAGCATATAAGCA
GTGACAGAATTAGTGCCTGTTCTTTTTTGACCTTAAGGTTTCCAGAAAGAGTACTGATGT
AAACCTTCAGAACCACCTC

consensusID : consensus_10499#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 310
fasta sequence

                              [TTTTTTTTTTTTGGATTGTTGTAAAATTATATTATACAATGTAAAATCAAATTTGTACAGATAAGAATCACATTCTTCTTCACTGTTCCTTTCTAATATTCTCCTTCGTTGAATGCCATCATCCCATACCTATCAAAGGAGAATAGATAGAAATACAATAATCATCATCTTCAAATTACATTATAACGTCTATTTAGATTACAATAATTAGTACAGTAAACGAAAAATAAACACATGCATGATACCTTATTGTGATACTATCAACCTTAATTATTATAACGCTCACTGTGATAATTAAGATCACTAGACA]

[+] EMBL AI168867             [TTTTTTTTTTTTGGATTGTTGTAAAATTATATTATACAATGTAAAATCAAATTTGTACAGATAAGAATCACATTCTTCTTCACTGTTCCTTTCTAATATTCTCCTTCGTTGAATGCCATCATCCCATACCTATCAAAGGAGAATAGATAGAAATACAATAATCATCATCTTCAAATTACATTATAACGTCTATTTAGATTACAATAATTAGTACAGTAAACGAAAAATAAACACATGCATGATACCTTATTGTGATACTATCAACCTTAATTATTATAACGCTCACTGTGATAATTAAGATCACTAGACA]




>consensus_10499#2
TTTTTTTTTTTTGGATTGTTGTAAAATTATATTATACAATGTAAAATCAAATTTGTACAG
ATAAGAATCACATTCTTCTTCACTGTTCCTTTCTAATATTCTCCTTCGTTGAATGCCATC
ATCCCATACCTATCAAAGGAGAATAGATAGAAATACAATAATCATCATCTTCAAATTACA
TTATAACGTCTATTTAGATTACAATAATTAGTACAGTAAACGAAAAATAAACACATGCAT
GATACCTTATTGTGATACTATCAACCTTAATTATTATAACGCTCACTGTGATAATTAAGA
TCACTAGACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10499#0      TTTTTTTTTTTTTTTTTTTTACGATAAGAACGATTACATAGCATTATATTAAATATACCA 60
consensus_10499#1      ------------------------------------------------------------
consensus_10499#2      ------------------------------------------------------------
                                                                                   

consensus_10499#0      GTTAGCGATAAACTACTGAACAGATCACAAGAATGATGTGGTTGAAGTTTACTCGGAGTC 120
consensus_10499#1      ------------------------------------------------------------
consensus_10499#2      ------------------------------------------------------------
                                                                                   

consensus_10499#0      CGAAGATGATTCGGACTCACTTGCGCTTGAGTCTTCTGACTCCTTTGAGTTTTCCCTTTT 180
consensus_10499#1      ------------------------------------------------------------
consensus_10499#2      ------------------------------------------------------------
                                                                                   

consensus_10499#0      AATCTTCATAGACTTTTCTGCAGACTGCTCTGAGTGATTTGATGATGAGTCGCTGTCGGA 240
consensus_10499#1      ------------------------------------------------------------
consensus_10499#2      ------------------------------------------------------------
                                                                                   

consensus_10499#0      TTTTTCTTCCGGGCTATTGGCTTTGGAAGTAACAGACGTTTTTCGAGAATCTAATGGAGA 300
consensus_10499#1      ------------------------------------------------------------
consensus_10499#2      ------------------------------------------------------------
                                                                                   

consensus_10499#0      GTGTTTAGGTGAACTGCCATTCGAATCTGTCTTCGACTTCTTGGCCTCAGATTCTCCGGA 360
consensus_10499#1      ------------------------------------------------------------
consensus_10499#2      ------------------------------------------------------------
                                                                                   

consensus_10499#0      TGATGAGCTTTCAGAATCCTTTCGAGCACTAGAAACCGAACGTTTTGACGAATCACTATC 420
consensus_10499#1      ------------------------------------------------------------
consensus_10499#2      ------------------------------------------------------------
                                                                                   

consensus_10499#0      CGACTCTGTCTTGGATTTTTTGGCTTCGGATTCTCCAGACGAGTCTTCCGAACTTTCGTC 480
consensus_10499#1      ------------------------------------------------------------
consensus_10499#2      ------------------------------------------------------------
                                                                                   

consensus_10499#0      AGAGTCTTTAGAAAGTCTTGCTTCGCCCTCAACATCCTTCGCTGACAAGGGATTTATTTT 540
consensus_10499#1      ------------------------------------------------------------
consensus_10499#2      ------------------------------------------------------------
                                                                                   

consensus_10499#0      TTCTTCTTCCTCATTTCCCGAATCTTCATCAGACGTTTTTCTTTGGTGTTCTGTGGAATC 600
consensus_10499#1      ------------------------------------------------------------
consensus_10499#2      ------------------------------------------------------------
                                                                                   

consensus_10499#0      GCCTTCATTTTCATCAACTTTCTCTTCAAAACTTTTATGTAAAGTCTTTTCTTTTTGACC 660
consensus_10499#1      ------------------------------------------------------------
consensus_10499#2      ------------------------------------------------------------
                                                                                   

consensus_10499#0      TTTATCCTCTTCTTCTTCAGCAGCTTCACTGTTTTCTTCCTCCTTAGGAATATCAGGCTT 720
consensus_10499#1      ------------------------------------------------------------
consensus_10499#2      ------------------------------------------------------------
                                                                                   

consensus_10499#0      ATCTTCATCGACCGAAGACTCCTTAGCCTTGTCCTCGTCCTCCTCCTCACTCTCAGCCTG 780
consensus_10499#1      ------------------------------------------------ACTCTCAGCCTG 12
consensus_10499#2      ------------------------------------------------------------
                                                                                   

consensus_10499#0      AAATTTAACGTCACAAATTGAGTCTGAGTAAGTTTTCTACAGGTTTAATTCATGCAGCAC 840
consensus_10499#1      AAATTTAACGTCACAAATTGAGTCTGAGTAAGTTTTCTACAGGTTTAATTCATGCAGCAC 72
consensus_10499#2      ------------------TTTTTTTTTTTTGGATTGTTGTAAAATTATATTATACA---- 38
                                         *   * *   *  * **  *  *   ***  * ** **    

consensus_10499#0      ATGCAAAATAAGGCTAAGCAATCATGCGAGATGACCTAAGGCGCAACTGGTACCTCACTG 900
consensus_10499#1      ATGCAAAATAAGGCTAAGCAATCATGCGAGATGACCTAAGGCGCAACTGGTACCTCACAG 132
consensus_10499#2      ATGTAAAATCAAATTT-GTACAGATAAGA-ATCACATTCTTCTTCACTG-TTCCTTTCTA 95
                       *** ***** *   *  * *   **  ** ** ** *    *   **** * ***  *  

consensus_10499#0      GCGCTGCTACCCATC-AATGCCGAGAACGACTTAGGTTTTTCTCCAGGCAATTTTAGAAA 959
consensus_10499#1      GCGCTGCTACCCATC-AATGCCGAGAACGACTTAGGTTTTTCTCCAGGCAATTTTAGAAA 191
consensus_10499#2      ATATTCTCCTTCGTTGAATGCC---ATCATCCCATACCTATCAAAGGAGAATAGATAGAA 152
                           *      * *  ******   * *  *  *    * **    *  ***      **

consensus_10499#0      AGATTCTAGTTCTTCCATTTCCACGGCCTCGTAAAATTC-CTCATAGCCCTGAAAAGATG 1018
consensus_10499#1      AGATTCTAGTTCTTCCATTTCCACGGCCTCGTAAAATTC-CTCATAGCCCTGAAAAGATG 250
consensus_10499#2      ATACAATAATCATCATCTTCAAATTACATTATAACGTCTATTTAGATTACAATAATTAGT 212
                       * *   ** *  *    **   *   * *  ***  *    * * *   *   **  *  

consensus_10499#0      AAAGTGAGAGGAATACTAACTCCGACCTCGTGCCG------------------------- 1053
consensus_10499#1      AAAGTGAGAGGAATACTAACTCCGAGATATTCTTCATCGAGGAAAATGTGTGGTGGAACC 310
consensus_10499#2      ACAGTAAACGAAAAATAAACACATGCATGATACCTTATTGTGATACTATCAACCTTAATT 272
                       * *** *  * ** *  *** *     *  *                             

consensus_10499#0      ------------------------------------------------------------
consensus_10499#1      A----AAGGTTTCTCTTTTTTCTTTAGCTCCTCAAATAATGAACACTTTCTAGACTCATT 366
consensus_10499#2      ATTATAACGCTCACTGTGATAATTAAGATCACTAGACA---------------------- 310
                                                                                   

consensus_10499#0      ------------------------------------------------------------
consensus_10499#1      GGAGACGTCAGAGAGGTCAACTTCTTCAAAGTCAACCTTTTTAGCATATAAGCAGTGACA 426
consensus_10499#2      ------------------------------------------------------------
                                                                                   

consensus_10499#0      ------------------------------------------------------------
consensus_10499#1      GAATTAGTGCCTGTTCTTTTTTGACCTTAAGGTTTCCAGAAAGAGTACTGATGTAAACCT 486
consensus_10499#2      ------------------------------------------------------------
                                                                                   

consensus_10499#0      -------------
consensus_10499#1      TCAGAACCACCTC 499
consensus_10499#2      -------------