cluster # 10506

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10506 cluster # 10506 Sequences # 17 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10506#0 length = 912 sequences # 8
consensus_10506#1 length = 894 sequences # 3
consensus_10506#2 length = 550 sequences # 1

consensus_10506#3 length = 504 sequences # 2
consensus_10506#4 length = 332 sequences # 1
consensus_10506#5 length = 281 sequences # 2

consensusID : consensus_10506#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 912
fasta sequence

                              [AAATATTTTTACACAAGAAATTTGGTTATCGTGGTATTGTGCTACAGTGTTGGAAGGGAAAACTGTTCGATCGTAATCTACAATCTACCGAATCAGTAGAACTAACGTCTCGTGAATCTCCAAAGGGAGAAGAATCTGAAATAAATGTTTACCAAGTTTTAACGGATCAAAGTGATACTGAAATTTGTAATTCTGCTTTAAAACCTGGTATTACTTTTTTACCTGATGATAAACGAGCGTTTAATTCCATATATATAGTGTCAGAAATGGACTATGTTTTCCATGATGATATCATACCTTACGTTCCGCAGGATGCGTCGCCAATTAAAAACCAATATTTTAGTGAATTCTTACTTTCTGCTCCAGACAAAGATCCACCATTTATTCCGACCGATCACTTAAAACGCTGGATTGAGGCGCGAAAGCAAAGTCTAGAAGTTACATCGATACATCGCGAAGTGACCGAAGGTATTCAAACAACAGTATTGCCTTTTTACATGGGCCGTCGAGTAACAGAGGACAAAAAGGAAAATGATGTACGCTACTGGCGCTATTTAATCCGGTTAGAAAACCTCACGATGGACCGCGTTCAACTACGTGAACGCTTTTTGAAAATTTTCTCAGTGTCCGGAAACCTTGAATCAATCGGCGGAAAAGGAGTTGTAGGGATGCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCAGTATCACAGTCATATCCACTTCCCTATGGAATGGGCACACATGTGGGGAACGTTTCGGTTTGAAAGACACAATGGTACTAGTTTAGATGTTAAAATACCATCTTTCCCGCTGTATGATCCCACGTGTTCTTCAAACTCGAGTAACGAAAACCTTGGTTAATTATCAACAATCGTCTTCTTACGAGCATGGCTACCTGATGTTGACT]

[+] EMBL CD183575             [AAATATTTTTACACAAGAAATTTGGTTATCGTGGTATTGTGCTACAGTGTTGGAAGGGAAAACTGTTCGATCGTAATCTACAATCTACCGAATCAGTAGAACTAACGTCTCGTGAATCTCCAAAGGGAGAAGAATCTGAAATAAATGTTTACCAAGTTTTAACGGATCAAAGTGATACTGAAATTTGTAATTCTGCTTTAAAACCTGGTATTACTTTTTTACCTGATGATAAACGAGCGTTTAATTCCATATATATAGTGTCAGAAATGGACTATGTTTTCCATGATGATATCATACCTTACGTTCCGCAGGATGCGTCGCCAATTAAAAACCAATATTTTAGTGAATTCTTACTTTCTGCTCCAGACAAAGATCCACCATTTATTCCGACCGATCACTTAAAACGCTGGATTGAGGCGCGAAAGCAAAGTCTAGAAGTTACATCGATACATCGCGAAGTGACCGAAGGTATTCAAACAACAGTATTGCCTTTTTACATGGGCCGTCGAGTAACAGAGGACAAAAAGGAAAATGATGTACGCTACTGGCGCTATNTAATCCGGTTAGAAAACCTCACGATGGACCGCGTTCAACTACGTGAACGCTTTNTGAAAA TTTCTCAGTGTCCGGAAACCTTGAATCATTCGGCGGAAAAGGAGTTGTAGGGATGCAAC                                                                                                                                                                                                                                             ]
[+] EMBL CD083665             [                                                                                                                                                 TGTTTACCAAGTTTTAACGGATCAAAGTGATACTGAAATTTGTAATTCTGCTTTAAAACCTGGTATTACTTTTTTACCTGATGATAAACGAGCGTTTAATTCCATATATATAGTGTCAGAAATGGACTATGTTTTCCATGATGATATCATACCTTACGTTCCGCAGGATGCGTCGCCAATTAAAAACCAATATTTTAGTGAATTCTTACTTTCTGCTCCAGACAAAGATCCACCATTTATTCCGACCGATCACTTAAAACGCTGGATTGAGGCGCGAAAGCAAAGTCTAGAAGTTACATCGATACATCGCGAAGTGACCGAAGGTATTCAAACAACAGTATTGCCTTTTTACATGGGCCGTCGAGTAACAGAGGACAAAAAGGAAAATGATGTACGCTACTGGCGCTATTTAATCCGGTTAGAAAACCTCACGATGGACCGCGTTCAACTACGTGAACGCTTTTTGAAAATTTTCTCAGTGTCCGGAAACCTTGA                                                                                                                                                                                                                                                                                ]
[+] EMBL CD137397             [                                                                                                                                                                                                                                                                    TCAGAAATGGACTATGTTTTCCATGATGATATCATACCTTACGTTCCGCAGGATGCGTCGCCAATTAAAAACCAATATTTTAGTGAATTCTTACTTTCTGCCCCAGACAAAGACCCACCATTTATTCCGACCGATCACTTAAAACGCTGGATTGAGGCGCGAAAGCAAAGTCTAGAAGTTACATCGATACATCGCGAAGTGACCGAAGGTATTCAAACAACAGTATTGCCTTTTTACATGGGCCGTCGAGTAACAGAGGACAAAAAGGAAAATGATGTACGCTACTGGCGCTATTTAATCCGGTTAGAAAACCTCACGATGGACCGCGTTCAACTACGTGAACGC TTTTGAAAATTTTCTCAGTGTCCGGAAACCTTGAATCAATCGGCGGAAAAGGAGTTGTAGGGATGCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCAGTATCACAGTCATATCCACTTCCCTATGGAA                                                                                                                                                                               ]
[-] EMBL CD137365             [                                                                                                                                                                                                                                                                     CAGAAATGGACTATGTTTTCCATGATGATATCATACCTTACGTTCCGCAGGACGCGTCGCCAATTAAAAACCAATATTTTAGTGAATTCTTACTTTCTGCTCCAGACAAAGACCCACCATTTATTCCGACCGATCACTTAAAACGCTGGATTGAGGCGCGAAAGCAAAGTCTAGAAGTTACATCGATACATCGCGAAGTGACCGAAGGTATTCAGACAACAGTATTGCCTTTTTACATGGGCCGTCGAGTAACAGAGGACAAAAAGGAAAATGATGTACGCTACTGGCGCTATTTAATCCGGTTAGAAAACCTCACGATGGACCGCGTTCAACTACGTGAACGCTTTTTGAAAATTTTCTCAGTGTCCGGAAACCTTGAATCAATCGGCGGAAAAGGAGTTGTAGGGATGCAACCTGTCCTTTCCCCAGAATGTCCCGTTTTTCAGTATCACAGTCATATCCACTTCCCTATGGAAT                                                                                                                                                                              ]
[-] EMBL CD137443             [                                                                                                                                                                                                                                                                     CAGAAATGGACTATGTTTTCCATGATGATATCATACCTTACGCTCCGCAGGATGCGACGCCAATTAAAAACCAATATTTTAGTGAATTCTTACTTTCTGCTCCAGACAAAGACCCACCATTTATTCCGACCGATCACTTAAAACGCTGGATTGAGGCGCGAAAGCAAAGTCTAGAAGTTACATCGATACATCGCGAAGTGACCGAAGGTATTCAAACAACAGTATTGCCTTTTTACATGGGCCGTCGAGTAACAGAGGACGAAA  GAAACTTTTTTCTGCTGGTGGtgaacct                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD178454             [                                                                                                                                                                                                                                                                                                                                                                      aGCTCCAGACAAAGATCCACCATTTACTCCGACCGATCACTTAAAACGCTGGATTGAGGCGCGAAAGCAAAGTCTAGAAGTTACATCGATACATCGCGAAGTGACCGAAGGTATTCAAACAACAGTATTGCCTTTTTACATGGGCCGTCGAGTAACAGAGGACAAAAAGGAAAATGATGTACGCTACTGGCGCTATTTAATCCGGTTAGAAAACCTCACGATGGACCGCGTTCAACTACGTGAACGCTTTTTGAAAATTTTCTCAGTGTCCGGAAACCTTGAATCAATCGGCGGAAAAGGAGTTGTAGGGAT                                                                                                                                                                                                                                                  ]
[+] EMBL CD195011             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACATCGATACATCGCGAAGTGACCGAAGGTATTCAAACAACAGTATTGCCTTTTTACATGGGCCGTCGAGTAACAGAGGACAAAAAGGAAAATGATGTACGCTACTGGCGCTATTTAATCCGGTTAGAAAACCTCACGATGGACCGCGTTCAACTACGTGAACGCTTTTTGAAAATTTTCTCAGTGTCCGGAAACCTTGAATCAATCGGCGGAAAAGGAGTTGTAGGGATGCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCAGTATCACAGTCATATCCACTTCCCTATGGAATGGGCACACATGTGGGGAACGTTTCGGTTTGAAAGACACAATGGTACTAGTTTAGATGTTAAAATACCATCTTTCCCGCTGTATGATCCCACGTGTTCTTCAAACTCGAGTAACGAAAACCTTGGTTAATTATCAACAATCGTCTTCTTACGAGCATGGCTACC           ]
[-] EMBL BG931808             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCCGGAAACCTTGAATCAATCGGCGGAAAAGGAGTTGTAGGGATGCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCAGTATCACAGTCATATCCACTTCCCTATGGAATGGGCACACATGTGGGGAACGTTTCGGTTTGAAAGACACAATGGTACTAGTTTAGATGTTAAAATACCATCTTTCCCGCTGTATGATCCCACGTGTTCTTCAAACTCGAGTAACGAAAACCTTGGTTAATTATCAACAATCGTCTTCTTACGAGCATGGCTACCTGATGTTGACT]




>consensus_10506#0
AAATATTTTTACACAAGAAATTTGGTTATCGTGGTATTGTGCTACAGTGTTGGAAGGGAA
AACTGTTCGATCGTAATCTACAATCTACCGAATCAGTAGAACTAACGTCTCGTGAATCTC
CAAAGGGAGAAGAATCTGAAATAAATGTTTACCAAGTTTTAACGGATCAAAGTGATACTG
AAATTTGTAATTCTGCTTTAAAACCTGGTATTACTTTTTTACCTGATGATAAACGAGCGT
TTAATTCCATATATATAGTGTCAGAAATGGACTATGTTTTCCATGATGATATCATACCTT
ACGTTCCGCAGGATGCGTCGCCAATTAAAAACCAATATTTTAGTGAATTCTTACTTTCTG
CTCCAGACAAAGATCCACCATTTATTCCGACCGATCACTTAAAACGCTGGATTGAGGCGC
GAAAGCAAAGTCTAGAAGTTACATCGATACATCGCGAAGTGACCGAAGGTATTCAAACAA
CAGTATTGCCTTTTTACATGGGCCGTCGAGTAACAGAGGACAAAAAGGAAAATGATGTAC
GCTACTGGCGCTATTTAATCCGGTTAGAAAACCTCACGATGGACCGCGTTCAACTACGTG
AACGCTTTTTGAAAATTTTCTCAGTGTCCGGAAACCTTGAATCAATCGGCGGAAAAGGAG
TTGTAGGGATGCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCAGTATCACAGTCATA
TCCACTTCCCTATGGAATGGGCACACATGTGGGGAACGTTTCGGTTTGAAAGACACAATG
GTACTAGTTTAGATGTTAAAATACCATCTTTCCCGCTGTATGATCCCACGTGTTCTTCAA
ACTCGAGTAACGAAAACCTTGGTTAATTATCAACAATCGTCTTCTTACGAGCATGGCTAC
CTGATGTTGACT

consensusID : consensus_10506#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 894
fasta sequence

                              [CATTAATTCGGCACGCGGGGATTACGCAGAGAAGTTTGTGGGCCGACAACAATCGTCGTAACGGTTTTTCTTGAAACATGCTTACACAGAACTAATGTTGATCATATCCCGAAAACTATTCAGCGTGTTGTCAGGTATGGTCTCCTTGAATTACGTTTTATATGGTCACAGAGGTTGCGTAAAATCCTCATATTTTGTACTGAACAGAAGGATTAGTAACCGAGTAAGCTTAACTAGCTGGTATGTTTTACATTCGTGAAGATAATCAGTGTTGAAATAATCAAGCCGCGATCTGACTGAAATACTATTCATATACAATTTGCATCTAATAATCTCGAAAACCACATCACACTAACATCAAACGAAATGACATGTTCCCTAATTTCTTCCATATTTGAAATAGTGGCGCTATTTAATCCGGTTAGAAAACCTCACGATGGACCGCGTTCAACTACGTGAACGCTTTTTGAAAATTTTCTCAGTGTCCGGAAACCTTGAATCAATCGGCGGAAAAGGAGTTGTAGGGATGGTAAGTACGGTGCACTTCACGCATATTCTGATTTACTTTTCCCTGTTAATTTCAGCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCAGTATCACAGTCATATCCACTTCCCTATGGAATGGGCACACATGTGGGGAACGTTTCGGTTTGAAAGACACAATGGTACTAGTTTAGATGTTAAAATACCATCTTTCCCGCTGTATGATCCCACGTGTTTTTCAAACTCGAGTAACGAAAACCTTGGTTAATTATCAACAATCGTCTTTTTACGAGCATGGGTACCTGATGTTGACACTCCCAAGACCATAAACGATTAAAACACACACCCAAAAAATTGTAACCAT-AATAAATAAAATGTTTAGA]

[+] EMBL CD081753             [CATTAATTCGGCACGCGGGGATTACGCAGAGAAGTTTGTGGGCCGACAACAATCGTCGTAACGGTTTTTCTTGAAACATGCTTACACAGAACTAATGTTGATCATATCCCGAAAACTATTCAGCGTGTTGTCAGGTATGGTCTCCTTGAATTACGTTTTATATGGTCACAGAGGTTGCGTAAAATCCTCATATTTTGTACTGAACAGAAGGATTAGTAACCGAGTAAGCTTAACTAGCTGGTATGTTTTACATTCGTGAAGATAATCAGTGTTGAAATAATCAAGCCGCGATCTGACTGAAATACTATTCATATACAATTTGCATCTAATAATCTCGAAAACCACATCACACTAACATCAAACGAAATGACATGTTCCCTAATTTCTTCCATATTTGAAATAGTGGCGCTATTTAATCCGGTTAGAAAACCTCACGATGGACCGCGTTCAACTACGTGAACGCTTTTTGAAAATTTTCTCAGTGTCCGGAAACCTTGAATCAATCGGCGGAAAAGGAGTTGTAGGGATGGTAAGTACGGTGCACTTCACGCATATTCTGATTTACTTTTCCCTGTTAATTTCAGCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCAGTATCACAGTCATATCCACTTCCCTATGGAATGGGCACACATGTGGGGAACGTTTCGGTTTGAAAGACACAATGGTACTAGTTTAGATGTTAAAATACCATCTTTCCCGCTGTATGATCCCACGTGTTCTTCANACTCGAGTAACGAANACCTTGGTTAATTATCAACAATCGTCTTCTTACGAGCATGGCTACCTGATGTTGACACTCCCCAGACCATAAACGATTAANACACACACCAAAAAAATTGT ACCATNAAT AAT AAATGTTTAGA]
[-] EMBL CD075487             [                                                                                                                                                                                                                                                                                                                  ATTCATATACAATTTGCATTTAATAATCTCGAAAACCACATCCCACTAACATCAAACGAAATGACATGTTCCCTAATTTTTTCCATATTTGAAATAGTGGCGCTATTTAATCCGGTTAGAAAACCTCACGATGGACCGCGTTCAACTACGTGAACGCTTTTTGAAAATTTTTTCAGTGTCCGGAAACCTTGAATCAATCGGCGGAAAAGGAGTTGTAGGGATGGTAAGTACGGTGCACTTCACGCATATTTTGATTTACTTTTCCCTGTTAATTTCAGCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCAGTATCACAGTCATATCCACTTCCCTATGGAATGGGCACACATGTGGGGAACGTTTCGGTTTGAAAGACCCAATGGTACTAGTTTAGATGTTAAAATACCATCTTTCCCGCTGTATGATCCCACGTGTTTTTCAAACTCGAGTAACGAAAACCTTGGTTAATTATCAACAATCGTTTTTTTACGAGCATGGGTACCTGATGTTGACACTCCCAAGACCATAAAAGATTAAAACAC CCCCCAAAAAATTGTAACCAT AATAAATAAAATGTTTAGA]
[-] EMBL CD076539             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTTTTTGAAAATTTTCTCAGTGTCCGGAAACCCTGAATCAATCGGCGGAAAAGGAGTTGTAGGGATGGTAAGTACGGTGCACTTCCCGCATATTATGATTTACTTTTCCCTGTTAATTTCAGCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCAGTATCACAGTCATATCCACTTCCCTATGGAATGGGCACACATGTGGGGAACGTTTCGGTTTGAAAGACACAATGGTACTAGTTTAGATGTTAAAATACCATCTTTCCCGCTGTATGATCCCACGTGTTTTTCAAACTCGAGTAACGAAAACCTTGGTTAATTATCAACAATCGTCTTTTTACGAGCATGGATACCTGATGTTGACACTCCCAAGACCATAAACGATTAAAACCCAC CCCAAAAAATTGTAACCAT AATAAATAAAATGTTTAGA]




>consensus_10506#1
CATTAATTCGGCACGCGGGGATTACGCAGAGAAGTTTGTGGGCCGACAACAATCGTCGTA
ACGGTTTTTCTTGAAACATGCTTACACAGAACTAATGTTGATCATATCCCGAAAACTATT
CAGCGTGTTGTCAGGTATGGTCTCCTTGAATTACGTTTTATATGGTCACAGAGGTTGCGT
AAAATCCTCATATTTTGTACTGAACAGAAGGATTAGTAACCGAGTAAGCTTAACTAGCTG
GTATGTTTTACATTCGTGAAGATAATCAGTGTTGAAATAATCAAGCCGCGATCTGACTGA
AATACTATTCATATACAATTTGCATCTAATAATCTCGAAAACCACATCACACTAACATCA
AACGAAATGACATGTTCCCTAATTTCTTCCATATTTGAAATAGTGGCGCTATTTAATCCG
GTTAGAAAACCTCACGATGGACCGCGTTCAACTACGTGAACGCTTTTTGAAAATTTTCTC
AGTGTCCGGAAACCTTGAATCAATCGGCGGAAAAGGAGTTGTAGGGATGGTAAGTACGGT
GCACTTCACGCATATTCTGATTTACTTTTCCCTGTTAATTTCAGCAACCTGTCCTTTCCC
CAGAATGTCCTGTTTTTCAGTATCACAGTCATATCCACTTCCCTATGGAATGGGCACACA
TGTGGGGAACGTTTCGGTTTGAAAGACACAATGGTACTAGTTTAGATGTTAAAATACCAT
CTTTCCCGCTGTATGATCCCACGTGTTTTTCAAACTCGAGTAACGAAAACCTTGGTTAAT
TATCAACAATCGTCTTTTTACGAGCATGGGTACCTGATGTTGACACTCCCAAGACCATAA
ACGATTAAAACACACACCCAAAAAATTGTAACCATAATAAATAAAATGTTTAGA

consensusID : consensus_10506#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 550
fasta sequence

                              [AGGCGGTTTTTAATTTGCTGACTGGACTTGTAGTCAACATGCATACTGACGTTATCTTGTAATATTATTGTTGAAGTTTTGTTGGTAGTTAAATGAAAGATATGTCTTTTTGGTCAGTCAGGATACCTTATAAGGTTAGGATAATTACGTGGATTACGCAAAGAAAGTTTGTGGGCCGACAACAATCGTCGTAACGGTTTTTCTTGAAACATGCTTACACAGAACTAATGTTGATCATATCCCGAAAACTATTCAGCGTGTTGTCAGGTATGGTCTCCTTGAATTACGTTTTATATGGTCACAGAGGTTGCGTAAAATCCTCATATTTTGTACTGAACAGAAGGATTAGTAACCGAGTAAGCTTAACTAGCTGGTATGTTTTACATTCGTGAAGATAATCAGTGTTGAAATAATCAAGCCGCGATCTGACTGAAATACTATTCATATACAATTTGCATCTAATAATCTCGAAAACCACATCACACTAACATCAAACGAAATGACATGTTCCCTAATTTCTTCCATATTAGAAATAGTGGCGCTATGTAAT]

[+] EMBL CD082956             [AGGCGGTTTTTAATTTGCTGACTGGACTTGTAGTCAACATGCATACTGACGTTATCTTGTAATATTATTGTTGAAGTTTTGTTGGTAGTTAAATGAAAGATATGTCTTTTTGGTCAGTCAGGATACCTTATAAGGTTAGGATAATTACGTGGATTACGCAAAGAAAGTTTGTGGGCCGACAACAATCGTCGTAACGGTTTTTCTTGAAACATGCTTACACAGAACTAATGTTGATCATATCCCGAAAACTATTCAGCGTGTTGTCAGGTATGGTCTCCTTGAATTACGTTTTATATGGTCACAGAGGTTGCGTAAAATCCTCATATTTTGTACTGAACAGAAGGATTAGTAACCGAGTAAGCTTAACTAGCTGGTATGTTTTACATTCGTGAAGATAATCAGTGTTGAAATAATCAAGCCGCGATCTGACTGAAATACTATTCATATACAATTTGCATCTAATAATCTCGAAAACCACATCACACTAACATCAAACGAAATGACATGTTCCCTAATTTCTTCCATATTAGAAATAGTGGCGCTATGTAAT]




>consensus_10506#2
AGGCGGTTTTTAATTTGCTGACTGGACTTGTAGTCAACATGCATACTGACGTTATCTTGT
AATATTATTGTTGAAGTTTTGTTGGTAGTTAAATGAAAGATATGTCTTTTTGGTCAGTCA
GGATACCTTATAAGGTTAGGATAATTACGTGGATTACGCAAAGAAAGTTTGTGGGCCGAC
AACAATCGTCGTAACGGTTTTTCTTGAAACATGCTTACACAGAACTAATGTTGATCATAT
CCCGAAAACTATTCAGCGTGTTGTCAGGTATGGTCTCCTTGAATTACGTTTTATATGGTC
ACAGAGGTTGCGTAAAATCCTCATATTTTGTACTGAACAGAAGGATTAGTAACCGAGTAA
GCTTAACTAGCTGGTATGTTTTACATTCGTGAAGATAATCAGTGTTGAAATAATCAAGCC
GCGATCTGACTGAAATACTATTCATATACAATTTGCATCTAATAATCTCGAAAACCACAT
CACACTAACATCAAACGAAATGACATGTTCCCTAATTTCTTCCATATTAGAAATAGTGGC
GCTATGTAAT

consensusID : consensus_10506#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 504
fasta sequence

                              [GAAATTTGTAATTCTGCTTTAAAACCTGGTATTACTTTTTTACCTGATGATAAACGAGCGTTTAATTCCATATATATAGTGTCAGAAATGGACTATGTTTTCCATGATGATATCATACCTTACGTTCCGCAGGATGCGTCGCCAATTAAAAACCAATATTTTAGTGAATTCTTACTTTCTGCTCCAGACAAAGATCCACCATTTATTCCGACCGATCACTTAAAACGCTGGATTGAGGCGCGAAAGCAAAGTCTAGAAGTTACATCGATACATCGCGAAGTGACCGAAGGTATTCAAACAACAGTATTGCCTTTTTACATGGGCCGTCGAGTAACAGAGGACAAAAAGGAAAATGATGTACGCTACCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCAGTATCACAGTCATATCCACTTCCCTATGGAATGGGCACACATGTGGGGAACGTTTCGGTTTGAAAGACACAATGGTACTAGTTTAGATGTAATACCATCTTTC]

[+] EMBL CD197861             [GAAATTTGTAATTCTGCTTTAAAACCTGGTATTACTTTTTTACCTGATGATAAACGAGCGTTTAATTCCATATATATAGTGTCAGAAATGGACTATGTTTTCCATGATGATATCATACCTTACGTTCCGCAGGATGCGTCGCCAATTAAAAACCAATATTTTAGTGAATTCTTACTTTCTGCTCCAGACAAAGATCCACCATTTATTCCGACCGATCACTTAAAACGCTGGATTGAGGCGCGAAAGCAAAGTCTAGAAGTTACATCGATACATCGCGAAGTGACCGAAGGTATTCAAACAACAGTATTGCCTTTTTACATGGGCCGTCGAGTAACAGAGGACAAAAAGGAAAATGATGTACGCTACCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCAGTATCACAGTCATAT                                                                                        ]
[-] EMBL CD061756             [         AATTCTGCTTTACAACCTGGTATTACTTTGTTACCTGATGATAAACGAGCGTTTAATTCCATATATATAGTGTCAGAAATGGACTATGTTTTCCATGATGATATCATACCTTACGTTCCGCAGGATGCGTCGCCAATTAAAAACCAATATTTTAGTGAATTCTTACTTTCTGCTCCAGACAAAGATCCACCATTTATTCCGACCGATCACTTAAAACGCTGGATTGAGGCGCGAAAGCAAAGTCTAGAAGTTACATCGATACATCGCGAAGTGACCGAAGGTATTCAAACAACAGTATTGCCTTTTCACATGGGCCGTCGAGTAACAGAGGACAAAAAGGAAAATGATGTACGCTACCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCAGTATCGCAGTCATATCCACTTCCCTATGGAATGGGCACACATGTGGGGAACGTTTCGGTTTGAAAGACACAATGGTACTAGTTTAGATGTAATACCATCTTTC]




>consensus_10506#3
GAAATTTGTAATTCTGCTTTAAAACCTGGTATTACTTTTTTACCTGATGATAAACGAGCG
TTTAATTCCATATATATAGTGTCAGAAATGGACTATGTTTTCCATGATGATATCATACCT
TACGTTCCGCAGGATGCGTCGCCAATTAAAAACCAATATTTTAGTGAATTCTTACTTTCT
GCTCCAGACAAAGATCCACCATTTATTCCGACCGATCACTTAAAACGCTGGATTGAGGCG
CGAAAGCAAAGTCTAGAAGTTACATCGATACATCGCGAAGTGACCGAAGGTATTCAAACA
ACAGTATTGCCTTTTTACATGGGCCGTCGAGTAACAGAGGACAAAAAGGAAAATGATGTA
CGCTACCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCAGTATCACAGTCATATCCAC
TTCCCTATGGAATGGGCACACATGTGGGGAACGTTTCGGTTTGAAAGACACAATGGTACT
AGTTTAGATGTAATACCATCTTTC

consensusID : consensus_10506#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 332
fasta sequence

                              [CAGAAATGGACTATGTTTTCCATGATGATATCATACCTTACGTTCCGCAGGATGCGTCGCCAATTAAAAACCAATATTTTAGTGAATTCTTACTTTCTGCTCCAGACAAAGGACAAAAAGGAAAATGATGTACGCTACTGGCGCTATTTAATCCGGTTAGAAAACCTCACGATGGACCGCGTTCAACTACGTGAACGCTTTTTGAAAATTTTCTCAGTGTCCGGAAACCTTGAATCAATCGGCGGAAAAGGAGTTGTAGGGATGCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCAGTAGTCACAGTCATATCCACTTCCCTATGGAAT]

[-] EMBL CD137455             [CAGAAATGGACTATGTTTTCCATGATGATATCATACCTTACGTTCCGCAGGATGCGTCGCCAATTAAAAACCAATATTTTAGTGAATTCTTACTTTCTGCTCCAGACAAAGGACAAAAAGGAAAATGATGTACGCTACTGGCGCTATTTAATCCGGTTAGAAAACCTCACGATGGACCGCGTTCAACTACGTGAACGCTTTTTGAAAATTTTCTCAGTGTCCGGAAACCTTGAATCAATCGGCGGAAAAGGAGTTGTAGGGATGCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCAGTAGTCACAGTCATATCCACTTCCCTATGGAAT]




>consensus_10506#4
CAGAAATGGACTATGTTTTCCATGATGATATCATACCTTACGTTCCGCAGGATGCGTCGC
CAATTAAAAACCAATATTTTAGTGAATTCTTACTTTCTGCTCCAGACAAAGGACAAAAAG
GAAAATGATGTACGCTACTGGCGCTATTTAATCCGGTTAGAAAACCTCACGATGGACCGC
GTTCAACTACGTGAACGCTTTTTGAAAATTTTCTCAGTGTCCGGAAACCTTGAATCAATC
GGCGGAAAAGGAGTTGTAGGGATGCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCAG
TAGTCACAGTCATATCCACTTCCCTATGGAAT

consensusID : consensus_10506#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 281
fasta sequence

                              [AATGATGTACGCTACTATCACAGTCATATCCACTTCCCTATGGAATGGGCACACATGTGGGGAACGTTTCGGTTTGAAAGACACAATGGTACTAGTTTAGATGTTAAAATACCATCTTTCCCGCTGTATGATCCCACGTGTTCTTCAAACTCGAGTAACGAAAACCTTGGTTAATTATCAACAATCGTCTTCTTACGAGCATGGCTACCTGATGTTGACACTCCCAAGACCATAAACGATTAAAACACACACCAAAAAATTGTAACCATAATAAATAAAAT]

[-] EMBL CD146805             [AATGATGTACGCTACTATCACAGTCATATCCACTTCCCTATGGAATGGGCACACATGTGGGGAACGTTTCGGTTTGAAAGACACAATGGTACTAGTTTAGATGTTAAAATACCATCTTTCCCGCTGTATGATCCCACGTGTTCTTCAAACTCGAGTAACGAAAACCTTGGTTAATTATCAACAATCGTCTTCTTACGAGCATGGCTACCTGATGTTGACACTCCCAAGACCATAAACGATTAAAACACACACCAAAAAATTGTAACCATAATAAATAAAAT]
[+] EMBL CD134866             [                                                              AACGTTTCGGTTTGAAAGACACAATGGTACTAGTTTAGATGTTAAAATACCATCTTTCCCGCTGTATGATCCCACGTGTTCTTCAAACTCGAGTAACGAAAGCCTTGGTTAATTATCAACAATCGTCTTCTTACGAGC                                                                                 ]




>consensus_10506#5
AATGATGTACGCTACTATCACAGTCATATCCACTTCCCTATGGAATGGGCACACATGTGG
GGAACGTTTCGGTTTGAAAGACACAATGGTACTAGTTTAGATGTTAAAATACCATCTTTC
CCGCTGTATGATCCCACGTGTTCTTCAAACTCGAGTAACGAAAACCTTGGTTAATTATCA
ACAATCGTCTTCTTACGAGCATGGCTACCTGATGTTGACACTCCCAAGACCATAAACGAT
TAAAACACACACCAAAAAATTGTAACCATAATAAATAAAAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10506#0      AAATATTTTTACACAAGAAATTTGGTTATCGTGGTATTGTGCTACAGTGTTGGAAGGGAA 60
consensus_10506#4      ------------------------------------------------------------
consensus_10506#3      ------------------------------------------------------------
consensus_10506#1      ------------------------------------------------------------
consensus_10506#2      ------------------------------------------------------------
consensus_10506#5      ------------------------------------------------------------
                                                                                   

consensus_10506#0      AACTGTTCGATCGTAATCTACAATCTACCGAATCAGTAGAACTAACGTCTCGTGAATCTC 120
consensus_10506#4      ------------------------------------------------------------
consensus_10506#3      ------------------------------------------------------------
consensus_10506#1      ------------------------------------------------------------
consensus_10506#2      ------------------------------------------------------------
consensus_10506#5      ------------------------------------------------------------
                                                                                   

consensus_10506#0      CAAAGGGAGAAGAATCTGAAATAAATGTTTACCAAGTTTTAACGGATCAAAGTGATACTG 180
consensus_10506#4      ------------------------------------------------------------
consensus_10506#3      -----------------------------------------------------------G 1
consensus_10506#1      ------------------------------------------------------------
consensus_10506#2      ------------------------------------------------------------
consensus_10506#5      ------------------------------------------------------------
                                                                                   

consensus_10506#0      AAATTTGTAATTCTGCTTTAAAACCTGGTATTACTTTTTTACCTGATGATAAACGAGCGT 240
consensus_10506#4      ------------------------------------------------------------
consensus_10506#3      AAATTTGTAATTCTGCTTTAAAACCTGGTATTACTTTTTTACCTGATGATAAACGAGCGT 61
consensus_10506#1      ------------------------------------------------------------
consensus_10506#2      ---------------------------------------------------------AGG 3
consensus_10506#5      ------------------------------------------------------------
                                                                                   

consensus_10506#0      TTAATTCCATATATATAGTGTCAGAAATGGACTATGTTTTCCATGATGATATCATACCTT 300
consensus_10506#4      ---------------------CAGAAATGGACTATGTTTTCCATGATGATATCATACCTT 39
consensus_10506#3      TTAATTCCATATATATAGTGTCAGAAATGGACTATGTTTTCCATGATGATATCATACCTT 121
consensus_10506#1      ------------------------------------------------------------
consensus_10506#2      CGGTTTTTAATTTGCTGACTGGACTTGTAGTCAACATGCATACTGACGTTATCTTGTAAT 63
consensus_10506#5      ------------------------------------------------------------
                                                                                   

consensus_10506#0      AC-GTTCCGCAGGATGCGTCGCCAATTAAAAACCAATATTTTAGTGAATTCTTACTTTCT 359
consensus_10506#4      AC-GTTCCGCAGGATGCGTCGCCAATTAAAAACCAATATTTTAGTGAATTCTTACTTTCT 98
consensus_10506#3      AC-GTTCCGCAGGATGCGTCGCCAATTAAAAACCAATATTTTAGTGAATTCTTACTTTCT 180
consensus_10506#1      ------------------------------------------------------------
consensus_10506#2      ATTATTGTTGAAGTTTTGTTGGTAGTTAAATGA-AAGATATGTCTTTTTGGTCAGTCAGG 122
consensus_10506#5      ------------------------------------------------------------
                                                                                   

consensus_10506#0      GCTCCAGACAAAGATCCACCATTTATTCCGACCGATCACTTAAAACGCTGGATTGAGGCG 419
consensus_10506#4      GCTCCAGACAAAG----------------------------------------------- 111
consensus_10506#3      GCTCCAGACAAAGATCCACCATTTAT---------------------------------- 206
consensus_10506#1      ------CATTAATTCGGCACG----CGGGGATTACGCAGAGAA-GTTTGTGGGCCGACAA 49
consensus_10506#2      ATACCTTATAAGGTTAGGATAATTACGTGGATTACGCAAAGAAAGTTTGTGGGCCGACAA 182
consensus_10506#5      ----------------------------------------------------------AA 2
                                                                                   

consensus_10506#0      CGAAAGCAAAGTCTAGAAGTTACATCGATACATCGCGAAGTGACCGAAGGTATTCAAACA 479
consensus_10506#4      ------------------------------------------------------------
consensus_10506#3      ------------------------------------------------------------
consensus_10506#1      CAATCGTCGTAACGGTTTTTCTTGAAACATGCTTACACAGAACT---------------- 93
consensus_10506#2      CAATCGTCGTAACGGTTTTTCTTGAAACATGCTTACACAGAACT---------------- 226
consensus_10506#5      TGATGTACGCTACTATCACAGTC-ATATCCACTTCCCTATGG------------------ 43
                                                                                   

consensus_10506#0      ACAGTATTGCCTTTTTACATGGGCCGTCGAGTAACAGAGGACAAAAAGGAAAATGATGTA 539
consensus_10506#4      ---------------------------------------GACAAAAAGGAAAATGATGTA 132
consensus_10506#3      ---------------------------------------TCCGACCGATCACTTAAAACG 227
consensus_10506#1      AATGTTGATCATATCCCGAAAACTATTCAGCGTGTTGTCAGGTATGGTCTCCTTGAATTA 153
consensus_10506#2      AATGTTGATCATATCCCGAAAACTATTCAGCGTGTTGTCAGGTATGGTCTCCTTGAATTA 286
consensus_10506#5      AATGG-GCACACATGTGGGGAACGTTTCGGT---TTGAAAGACACAATGGTACTAGTTTA 99
                                                                  *         *      

consensus_10506#0      CGCTAC-TGGCGCTATTTAATCCGGTTAGAAAACCTCA--CGATGGACCGCGTTCAACTA 596
consensus_10506#4      CGCTAC-TGGCGCTATTTAATCCGGTTAGAAAACCTCA--CGATGGACCGCGTTCAACTA 189
consensus_10506#3      CTGGAT-TGAGGCGCGAAAGCAAAGTCTAGAAGTTACAT-CGATACATCGCG---AAGTG 282
consensus_10506#1      CGTTTTATATGGTCACAGAGGTTGC-GTAAAATCCTCATATTTTGTACTGAACAGAAGGA 212
consensus_10506#2      CGTTTTATATGGTCACAGAGGTTGC-GTAAAATCCTCATATTTTGTACTGAACAGAAGGA 345
consensus_10506#5      GATGTTAAAATACCATCTTTCCCGCTGTATGATCC-CACGTGTTCTTCAAACTCGAGTAA 158
                                                      *    **     *           *    

consensus_10506#0      CGTGAACGCTTTTTGAAAA---TTTTCTCAGTGTCCGGAAACCTTGAATCAATCGGCGG- 652
consensus_10506#4      CGTGAACGCTTTTTGAAAA---TTTTCTCAGTGTCCGGAAACCTTGAATCAATCGGCGG- 245
consensus_10506#3      ACCGAAGGTATTCAAACAACAGTATTGCCTTTTTACATGGGCCGTCGAGTAACAGAGGAC 342
consensus_10506#1      TTAGTAACCGAGTAAGCTTAACTAGCTGGTATGTTTTACATTCGTGAAGATAATCAGTGT 272
consensus_10506#2      TTAGTAACCGAGTAAGCTTAACTAGCTGGTATGTTTTACATTCGTGAAGATAATCAGTGT 405
consensus_10506#5      CGAAAACCTTGGTTAATT--ATCAACAATCGTCTTCT-TACGAGCATGGCTACCTGATGT 215
                            *                         * *                 *        

consensus_10506#0      -AAAAGGA----GTTGT-AGGGATGCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCA 706
consensus_10506#4      -AAAAGGA----GTTGT-AGGGATGCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCA 299
consensus_10506#3      AAAAAGGAAAATGATGT-ACGCTACCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCA 401
consensus_10506#1      TGAAATAATCAAGCCGCGATCTGACTGAAATACTATTCATATACAAT-TTGCATCTAATA 331
consensus_10506#2      TGAAATAATCAAGCCGCGATCTGACTGAAATACTATTCATATACAAT-TTGCATCTAATA 464
consensus_10506#5      TGACACTCCCAAGACCATAAACGATTAAAACACACACCA---AAAAA-TTGTAACCA-TA 270
                         * *       *     *        *              * **  *          *

consensus_10506#0      GTA-TCACAGTCATATCCACTTCCCTATGGAATGGGCACACATGTGGGGAACGTTTCGGT 765
consensus_10506#4      GTAGTCACAGTCATATCCACTTCCCTATGGAAT--------------------------- 332
consensus_10506#3      GTA-TCACAGTCATATCCACTTCCCTATGGAATGGGCACACATGTGGGGAACGTTTCGGT 460
consensus_10506#1      ATCTCGAAAACCACATC-ACACTAACATCAAACGAAATGACATGTTCCCTAATTTCTTCC 390
consensus_10506#2      ATCTCGAAAACCACATC-ACACTAACATCAAACGAAATGACATGTTCCCTAATTTCTTCC 523
consensus_10506#5      ATAAATAAAAT------------------------------------------------- 281
                        *    * *                                                   

consensus_10506#0      TTGAAAGACACAATGGTACTAGTTTAGATGTTAAAATACCATCTTTCCCGCTGTATGATC 825
consensus_10506#4      ------------------------------------------------------------
consensus_10506#3      TTGAAAGACACAATGGTACTAGTTTAGATGTAATACCATCTTTC---------------- 504
consensus_10506#1      ATATTTGAAATAGTGGCGCTATTTAATCCGGTTAGAAAACCTCACGATGGACCGCGTTCA 450
consensus_10506#2      ATATTAGAAATAGTGGCGCTATGTAAT--------------------------------- 550
consensus_10506#5      ------------------------------------------------------------
                                                                                   

consensus_10506#0      CCACGTGTTCTTCAAACTCGAGTAACGAAAACCTTGGTTAATTATCAACAATCGTCTTCT 885
consensus_10506#4      ------------------------------------------------------------
consensus_10506#3      ------------------------------------------------------------
consensus_10506#1      ACTACGTGAACGCTTTTTGAAAATTTTCTCAGTGTCCGGAAACCTTGAATCAATCGGCGG 510
consensus_10506#2      ------------------------------------------------------------
consensus_10506#5      ------------------------------------------------------------
                                                                                   

consensus_10506#0      TACGAGCATGGCTACCTGATGTTGACT--------------------------------- 912
consensus_10506#4      ------------------------------------------------------------
consensus_10506#3      ------------------------------------------------------------
consensus_10506#1      AAAAGGAGTTGTAGGGATGGTAAGTACGGTGCACTTCACGCATATTCTGATTTACTTTTC 570
consensus_10506#2      ------------------------------------------------------------
consensus_10506#5      ------------------------------------------------------------
                                                                                   

consensus_10506#0      ------------------------------------------------------------
consensus_10506#4      ------------------------------------------------------------
consensus_10506#3      ------------------------------------------------------------
consensus_10506#1      CCTGTTAATTTCAGCAACCTGTCCTTTCCCCAGAATGTCCTGTTTTTCAGTATCACAGTC 630
consensus_10506#2      ------------------------------------------------------------
consensus_10506#5      ------------------------------------------------------------
                                                                                   

consensus_10506#0      ------------------------------------------------------------
consensus_10506#4      ------------------------------------------------------------
consensus_10506#3      ------------------------------------------------------------
consensus_10506#1      ATATCCACTTCCCTATGGAATGGGCACACATGTGGGGAACGTTTCGGTTTGAAAGACACA 690
consensus_10506#2      ------------------------------------------------------------
consensus_10506#5      ------------------------------------------------------------
                                                                                   

consensus_10506#0      ------------------------------------------------------------
consensus_10506#4      ------------------------------------------------------------
consensus_10506#3      ------------------------------------------------------------
consensus_10506#1      ATGGTACTAGTTTAGATGTTAAAATACCATCTTTCCCGCTGTATGATCCCACGTGTTTTT 750
consensus_10506#2      ------------------------------------------------------------
consensus_10506#5      ------------------------------------------------------------
                                                                                   

consensus_10506#0      ------------------------------------------------------------
consensus_10506#4      ------------------------------------------------------------
consensus_10506#3      ------------------------------------------------------------
consensus_10506#1      CAAACTCGAGTAACGAAAACCTTGGTTAATTATCAACAATCGTCTTTTTACGAGCATGGG 810
consensus_10506#2      ------------------------------------------------------------
consensus_10506#5      ------------------------------------------------------------
                                                                                   

consensus_10506#0      ------------------------------------------------------------
consensus_10506#4      ------------------------------------------------------------
consensus_10506#3      ------------------------------------------------------------
consensus_10506#1      TACCTGATGTTGACACTCCCAAGACCATAAACGATTAAAACACACACCCAAAAAATTGTA 870
consensus_10506#2      ------------------------------------------------------------
consensus_10506#5      ------------------------------------------------------------
                                                                                   

consensus_10506#0      ------------------------
consensus_10506#4      ------------------------
consensus_10506#3      ------------------------
consensus_10506#1      ACCATAATAAATAAAATGTTTAGA 894
consensus_10506#2      ------------------------
consensus_10506#5      ------------------------