cluster # 10510

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Schistosoma mansoni
cluster # 10510 cluster # 10510 Sequences # 17 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10510#0 length = 912 sequences # 5
consensus_10510#1 length = 906 sequences # 8
consensus_10510#2 length = 599 sequences # 1

consensus_10510#3 length = 376 sequences # 1
consensus_10510#4 length = 304 sequences # 1
consensus_10510#5 length = 262 sequences # 1

consensusID : consensus_10510#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 912
fasta sequence

                              [AACAAAGACAATGTCAAGTTTAAGATCAGATGCAGTCGATTCCTTTATACGCTTGTAGTTGTGGAGAAGGAAAAAGTTGGAAAAATCAAGC-GTTCACTCCCACCAAATCTAACTGTGAAGGAACTGTAATATGTTGCTTTTAATAAAGGTTTCTATATATTGGATCTTGTTCGATGATATCCGGGAGTTAGGGAAGAACTAGATAAGTAAAACGAACCAAGCACAGCGCTGTACCGAGATAACCACGTTGAGCAAAAAGAAATTGAGTTCAAGACACTTTTAGTTAAACAGTATTACGAATCAATAGAACGAATTAGAAAGAAAAGTAGTTCAAACATACCGTTATCCATTAAGGCTAATGTTGGAAAGTAACTGACTTGATATCGTAGAAGTAAACAAAGAAACTACTGTCATCAGCGGATATGACAGGTTTAACAACCACATGAATAATAACAATAATATTCGCTACATTTAGGCTGCGACTATCATTAACAAGACAAACAAGATGGAATACAACGCTTACAGAAGGTACATGGTCACAC-TGACGAGCTCACGATGTAGGTGGGTGCTTTGTTTAGCCGAAAAACAAACGATTGCGTATGATAACGAACACTCGTGAACGCTTCATTCGTACATCTCAGAAAACCTATGTGTGATGTATCAAATTCTATGCACGGATGAGAAGCTGTAGTATAGAATGAAGTCATTTTATTCTGCAAACCTTGTTGTCCTTGCTCTGTTTAAATGTATCAAGGGATCTGGTTGTATGAACATTTAATGTTTGCCTAAGCTTTTGTGTATGGAAAAACAAGTTTGTGATTGACAATTAGAGGTATGTGGGACTTCTAGATCGTGTCTCGTGATTTGGCTTAATTTGTAGTTCTATGTAAATCGGCATCTAGGTATGTGGTA]

[-] EMBL CD169244             [AACAAAGACAATGTCAAGTTTAAGATCAGATGCAGTCGATTCCTTTATACGCTTGTAGTTGTGGAGAAGGAAAAAGTTGGAAAAATCAAGC GTTCACTCCCACCAAATCTAACTGTGAAGGAACTGTAATATGTTGCTTTTAATAAAGGTTTCTATATATTGGATCTTGTTCGATGATATCCGGGAGTTAGGGAAGAACTAGATAAGTAAAACGAACCAAGCACAGCGCTGTACCGAGATAACCACGTTGAGCAAAAAGAAATTGAGTTCAAGACACTTTTAGTTAAACAGTATTACGAATCAATAGAACGAATTAGAAAGAAAAGTAGTTCAAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AI021795             [         AATGTCAAGTTTAAGATCAGATGCAGTCGATTCCTTTATACGCTTGTAGTTGTGGAGAAGGAAAAAGTTGGAAAAATCAAGC GTTCACTCCCACCAAATCTAACTGTGAAGGAACTGTAATATGTTGCTTTTAATAAAGGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AA566167             [            GTCAAGTTTAAGATCAGATGCAGTCGATTCCTTTATACGCTTGTAGTTGTGGAGAAGGAAAAAGTTGGAAAAATCAAGCGGTTCACTCCCACCAAATCTAACTGTGAAGGAACTGTAATATGTTGCTTTTAATAAANNTTTCTATATATTGt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD191425             [                                                                                                                                                                                                                                                                AAAGAAATTGAGCTCAAGACACTTTTAATTAAACAGTATTACGAATCAATAGAACGAATTAAAAAGAAAAGTAGTTCAAACATACCGTTATCCATTAAGGCTAATGTTGGAAAGTAACTGACTTGATATCGTAGAAGTAAACAAAGAAACTACTGTCATCAGCGGATATGACAGGTTTAACAACCACATGAATAATAACAATAATATTCGCTACATTTAGGCTGCGACTATCATTAACAAGACAAACAAGATGGAATACAACGCTTACAGAAGGTACATGGTCACAC TGACGAGCTCACGATGTAGGTGGGTGCTTTGTTTAGCCGAAAAACAAACGATTGCGTATGATAACGAACACTCGTGAACGCTTCATTCGTACATCTCAGA                                                                                                                                                                                                                                                                              ]
[+] EMBL CD084202             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TACAGAAGGTACATGGTCGCACTTGACGAGCTCACGATGTTGGTGGGTGCTTTGTGTAGCCGAAAAACAAACGATTGAGTATGATAACGAACACTCGTGAACGCATCATTCGTAGATCACAGAAAACCTATGTGTGATGTATCAAATTCTATGCACGGATGAGAAGCTGTAGTATAGAATGAAGTCATTTTATTCTGCAAACCTTGTTGTCCTTGCTCTGTTTAAATGTATCAAGGGATCTGGTTGTATGAACATTTAATGTTTGCCTAAGCTTTTGTGTATGGAAAAACAAGTTTGTGATTGACAATTAGAGGTATGTGGGACTTCTAGATCGTGTCTCGTGATTTGGCTTAATTTGTAGTTCTATGTAAATCGGCATCTAGGTATGTGGTA]




>consensus_10510#0
AACAAAGACAATGTCAAGTTTAAGATCAGATGCAGTCGATTCCTTTATACGCTTGTAGTT
GTGGAGAAGGAAAAAGTTGGAAAAATCAAGCGTTCACTCCCACCAAATCTAACTGTGAAG
GAACTGTAATATGTTGCTTTTAATAAAGGTTTCTATATATTGGATCTTGTTCGATGATAT
CCGGGAGTTAGGGAAGAACTAGATAAGTAAAACGAACCAAGCACAGCGCTGTACCGAGAT
AACCACGTTGAGCAAAAAGAAATTGAGTTCAAGACACTTTTAGTTAAACAGTATTACGAA
TCAATAGAACGAATTAGAAAGAAAAGTAGTTCAAACATACCGTTATCCATTAAGGCTAAT
GTTGGAAAGTAACTGACTTGATATCGTAGAAGTAAACAAAGAAACTACTGTCATCAGCGG
ATATGACAGGTTTAACAACCACATGAATAATAACAATAATATTCGCTACATTTAGGCTGC
GACTATCATTAACAAGACAAACAAGATGGAATACAACGCTTACAGAAGGTACATGGTCAC
ACTGACGAGCTCACGATGTAGGTGGGTGCTTTGTTTAGCCGAAAAACAAACGATTGCGTA
TGATAACGAACACTCGTGAACGCTTCATTCGTACATCTCAGAAAACCTATGTGTGATGTA
TCAAATTCTATGCACGGATGAGAAGCTGTAGTATAGAATGAAGTCATTTTATTCTGCAAA
CCTTGTTGTCCTTGCTCTGTTTAAATGTATCAAGGGATCTGGTTGTATGAACATTTAATG
TTTGCCTAAGCTTTTGTGTATGGAAAAACAAGTTTGTGATTGACAATTAGAGGTATGTGG
GACTTCTAGATCGTGTCTCGTGATTTGGCTTAATTTGTAGTTCTATGTAAATCGGCATCT
AGGTATGTGGTA

consensusID : consensus_10510#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 906
fasta sequence

                              [GCCAANAATTTGGCACGAGGGCGCTCACGATGTAGGTGGGTGCTTTGTTTAGCCGAAAAACAAACGATTGAGTATGATAACGAACACTCGTGAACGCATCATTCGTAGATAACAGAAAACCTATGTGTGATGTATCAAATTCTATGCACGGATGAGAAGCTGTAGTATAGAATGAAGTCATTTTATTCTGCAAACCTTGTTGTCCTTGCTCTGTTTAAATGTATCAAGGGATCTGGTTGTATGACATTTAATGTTTGCCTAAGCTTTTGTGTATGGAAAACAAGTTGTGATTGACAATTAGAGGTATGTGGGACTTCTAGATCGTGTGTTTTGTGATTTGGCTTAATTTGTAGTTCTATGTAAATCGGCATCTAGGTATGTGGTACGCTAGCTAATTTAGCCTACAGTGGTTGTGGAGATGGGAATACGTGCGAGTAGGATAGGGTGTAGCTGAGGAATTTCCCAGGGGTCATTTTGTTTTCAGGGATGCTTGACGCATTGTCTGCAAGCCTACAGGTGAATGTGGCGACCGTGTGCGTAGTGTGTAGTGTCCTGGCTGACCGATGGTGATGGGTTTGTGCGGAACTGCTGAGTTTTGGTGGTCTTCTGTGTTCACGGTGCGGATCAGGTCGTATTTGTTATCAGAAGGTTTTGACCAATGTTCGTGGATATTAGTGCGGAAATTCCAGTTTCAGGTATTCGTGCCGGTTTGTTGTTGCGACAGGTTATTTCGAATTGGTTGTTTTCAGCATTCGATTGGCGAATGTTGATGGG-TGTGGTTTTCCATTTGGTGGTTTGTAGACTGGAATGTGTCCTACGAGTTCATAGTGCCACTCTATTCTGGCTGTCTGTAAAGAGTGTAATGAAAAGAGAATTGTAAGGATGTAAAAGATAATATGTAATACC]

[+] EMBL CD081408             [GCCAANAATTTGGCACGAGGGCGCTCACGATGTAGGTGGGTGCTTTGTTTAGCCGAAAAACAAACGATTGAGTATGATAACGAACACTCGTGAACGCATCATTCGTAGATAACAGAAAACCTATGTGTGATGTATCAAATTCTATGCACGGATGAGAAGCTGTAGTATAGAATGAAGTCATTTTATTCTGCAAACCTTGTTGTCCTTGCTCTGTTTAAATGTATCAAGGGATCTGGTTGTATGACATTTAATGTTTGCCTAAGCTTTTGTGTATGGAAAACAAGTTGTGATTGACAATTAGAGGTATGTGGGACTTCTAGATCGTGTGTTTTGTGATTTGGCTTAATTTGTAGTTCTATGTAAATCGGCATCTAGGTATGTGGTACGCTAGCTAATTTAGCCTACAGTGGTTGTGGAGATGGGAATACGTGCGAGTAGGATAGGGTGTAGCTGAGGAATTTCCCAGGGGTCATTTTGTTTTCAGGGATGCTTGACGCATTGTCTGCAAGCCTACAGGTGAATGTGGCGACCGTGTGCGTAGTGTGTAGTGTCCTGGCTGACCGATGGTGATGGGTTTGTGCGGAACTGCTGAGTTTTGGTGGTCTTCTGTGTTCACGGTGCGGATCAGGTCGTATTTGTTATCAGAAGGTTTTGAC                                                                                                                                                                                                                                                           ]
[-] EMBL CD188576             [                                                                              AACGAACACTCGTGAACGCATCATTCGTAGATAACAGAAAACCTATGTGTGATGTATCAAATTCTATGCACGGATGAGAAGCTGTAGTATAGAATGAAGTCATTTTATTCTGCAAACCTTGTTGTCCTTGCTCTGTTTAAATGTATCAAGGGATCTGGTTGTATGACATTTAATGTTTGCCTAAGCTTTTGTGTATGGAAAACAAGTTGTGATTGACAATTAGAGGTATGTGGGACTTCTAGATCGTGTGTTTTGTGATTTGGCTTAATTTGTAGTTCTATGTAAATCGGCATCTAGGTATGTGGTACGCTAGCTAATTTAGCCTACAGTGGTTGTGGAGATGGGAATACGTGCGAGTAGGATAGGGTGTAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD070035             [                                                                                                                                                                                                                                                                                                                                                                                             GGTACGCTAGCTAATTTAGCCTACAGTGGTTGTGGAGATGGGAATACGTGCGAGTAGGATAGGGTGTAGCTGAGGAATTTCCCAGGGGTCATTTTGTTTTCAGGGATGCTTGACGCATTGTCTGCAAGCCTACAGGTGAATGTGGCGACCGTGTGCGTAGTGTGTAGTGTCCTGGCT                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD070039             [                                                                                                                                                                                                                                                                                                                                                                                             GGTACGCTAGCTAATTTAGCCTACAGTGGTTGTGGAGATGGGAATACGTGCGAGTAGGATAGGGTGTAGCTGAGGAATTTCCCAGGGGTCATTTTGTTTTCAGGGATGCTTGACGCATTGTCTGCAAGCCTACAGGTGAATGTGGCGACCGTGTGCGTAGTGTGTAGTGTCCTGGCT                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD135320             [                                                                                                                                                                                                                                                                                                                                                                                                                                       AATACGTGCGAGTAGGATAGGGTGTAGCTGAGGAATTTCCCAGGGGTCATTTTGTTTTCAGGGATGCTTGACGCATTGTCTGCAAGCCTACAGGTGAATGTGGCGACCGTGTGCGTAGTGTGTAGTGTCCTGGCTGACCGATGGTGATGGGTTTGTGCGGAACTGCTGAGTTTTGGTGGTCTTCTGTGTTCACGGTGCGGATCAGGTCGTATTTGTTATCAGAAGGTTTTGACCAATGTTCGTGGATATTAGTGCGGAAATTCCAGTTTCAGGTATTCGTGCCGGTTTGTTGTTGCGACAGGTTATTTCGAATTGGTTGTTTTCAGCATTCGATTGGCGAATGTTGATGGGTTGTGGTTTTC                                                                                                                          ]
[-] EMBL CD119065             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGAATTTCCCAGGGGTCATTTTGTTTTCAGGGATGCTTGACGCATTGTCTGCAAGCCTACAGGTGAATGTGGCGACCGTGTGCGTAGTGTGTAGTGTCCTGGCTGACCGATGGTGATGGGTTTGTGCGGAACTGCTGAGTTTTGGTGGTCTTCTGTGTTCACGGTGCGGATCAGGTCGTATTTGTTATCAGAAGGTTTTGACCAATGTTCGTGGATATTAGTGCGGAAATTCCAGTTTCAGGTATTCGTGCCGGTTTGTTGTTGCGACAGGTTATTTCGAATTGGTTGTTTTCAGCATTCGATTGGTGAATGTTGATGGG TGTGGTTTTCCATTTGGTGGTTTGTAGACTGGAATGTGTCCTACGAGTTCATAGTGCCACTCTATTCTGGCTGTCTGTAAAGAGTGTAATGAAAAGAG                                  ]
[-] EMBL CD075238             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CATTTTGTTTTCAGGGATGCTTGACGCATTGTCTGCAAGCCTACAGGTGAATGTGGCGACCGTGTGCGTAGTGTGTAGTGTCCTGGCTGACCGATGGTGATGGGTTTGTGCGGAACTGCTGAGTTTTGGTGGTCTTCTGTGTTCACGGTGCGGATCAGGTTGTATTTGTTATCAAAAGGTTTTGACCAATGTTCGTGGATATTAGTGCGGAAATTCCAGTTTCAGGTATTTGTGCCGGTTTGTTGTTGCGACAGGTTATTTCGAATTGGTTGTTTTCAGCATTCGATTGGCGAATGTTGATGGG TGTGGTTTTCCATTTGGTGGTTTGTAGACTGGAATGTGTCCTACGAGTTCATAGTGCCCCTCTATTTTGGCTGTCTGTAAAGAGTGTAATGAAAAAAGAATTGTAAGGATGTAAAAGATAATATGTAATACC]
[-] EMBL CD119008             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCAGGAATGCTGNACGCATTGTCTGCAAGCCTACAGGTGAATGTGGCGACCGTGTGCGCAGTGTGTAGTGTCCTGGTTGACCGATGGTGATGGGTTAGTGCGGAACTGCTGAGTTTTGGTGGTCTTCTGTGTTCACGGTGCGGATCAGGTCGTATTTGTTATCAGAAGGTTTTGACCAATGTTCGTGGATATTAGTGCGGAAATTCCAGTTTCAGGTATTCGTGCCGGTTTGTTGTTGCGACAGGTTATTTCGAATTGGTTGTTTTCAGCATTCGATTGGCGAATGTTGATGGG TGTGGTTTTCCATTTGGTGGTTTGTAGACTGGAATGTGTCCTACGAGTTCATAGTGCCACTCTATTCTGGCTGTCTGTAAAGAGTGTAATGAAAAGAG                                  ]




>consensus_10510#1
GCCAANAATTTGGCACGAGGGCGCTCACGATGTAGGTGGGTGCTTTGTTTAGCCGAAAAA
CAAACGATTGAGTATGATAACGAACACTCGTGAACGCATCATTCGTAGATAACAGAAAAC
CTATGTGTGATGTATCAAATTCTATGCACGGATGAGAAGCTGTAGTATAGAATGAAGTCA
TTTTATTCTGCAAACCTTGTTGTCCTTGCTCTGTTTAAATGTATCAAGGGATCTGGTTGT
ATGACATTTAATGTTTGCCTAAGCTTTTGTGTATGGAAAACAAGTTGTGATTGACAATTA
GAGGTATGTGGGACTTCTAGATCGTGTGTTTTGTGATTTGGCTTAATTTGTAGTTCTATG
TAAATCGGCATCTAGGTATGTGGTACGCTAGCTAATTTAGCCTACAGTGGTTGTGGAGAT
GGGAATACGTGCGAGTAGGATAGGGTGTAGCTGAGGAATTTCCCAGGGGTCATTTTGTTT
TCAGGGATGCTTGACGCATTGTCTGCAAGCCTACAGGTGAATGTGGCGACCGTGTGCGTA
GTGTGTAGTGTCCTGGCTGACCGATGGTGATGGGTTTGTGCGGAACTGCTGAGTTTTGGT
GGTCTTCTGTGTTCACGGTGCGGATCAGGTCGTATTTGTTATCAGAAGGTTTTGACCAAT
GTTCGTGGATATTAGTGCGGAAATTCCAGTTTCAGGTATTCGTGCCGGTTTGTTGTTGCG
ACAGGTTATTTCGAATTGGTTGTTTTCAGCATTCGATTGGCGAATGTTGATGGGTGTGGT
TTTCCATTTGGTGGTTTGTAGACTGGAATGTGTCCTACGAGTTCATAGTGCCACTCTATT
CTGGCTGTCTGTAAAGAGTGTAATGAAAAGAGAATTGTAAGGATGTAAAAGATAATATGT
AATACC

consensusID : consensus_10510#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 599
fasta sequence

                              [CTGAAAATATAGTGAGTTTTTTCTAGCCGTTAAGATTAGAGAAGACAAAGTCAATGTCAAGTTTAAGATCAGATGCAGTCGATTCCTTTATACGCTTGTAGTTGTGGAGAAGGAAAGAGTTGGAAACATCGTAGCGTTCACTCCCGCCAAGTATACACATATATTAATCAGCTAATTCTGCCTCTTTATAGATCTACCTGTGCAGGAACTGTAATATGTAGCTTTTAATAAAGGTTTCTATATATTGGATCTTGTTCGATGATATCCGGGAGTTAGGGAAGATCTAGATAAGTAAATCGAACCGAGCACAGCGGTGTTCTGAGATAACCACGTTGAGCAAAAAGAAATTGAGTTCAAGACACTTTTAATTAACCAGTATTCCGAATCAATAGTCCGAATTAAAAAGACAAGTAGTTCAAACATCCCGTTATCCATTAAGGCTAATGTTGTAAAGTAACTGACTTGATATCGTAGAAGTAAACAAAGAAACTACTGTCATCAGCGGATATGACAGGTTTAACAACCACATGAATAATAACAAAAATATTCGATACATTTAGGCTGGATCTATCATTAACAAGACAAACGAGACGGAATTC]

[-] EMBL CD113996             [CTGAAAATATAGTGAGTTTTTTCTAGCCGTTAAGATTAGAGAAGACAAAGTCAATGTCAAGTTTAAGATCAGATGCAGTCGATTCCTTTATACGCTTGTAGTTGTGGAGAAGGAAAGAGTTGGAAACATCGTAGCGTTCACTCCCGCCAAGTATACACATATATTAATCAGCTAATTCTGCCTCTTTATAGATCTACCTGTGCAGGAACTGTAATATGTAGCTTTTAATAAAGGTTTCTATATATTGGATCTTGTTCGATGATATCCGGGAGTTAGGGAAGATCTAGATAAGTAAATCGAACCGAGCACAGCGGTGTTCTGAGATAACCACGTTGAGCAAAAAGAAATTGAGTTCAAGACACTTTTAATTAACCAGTATTCCGAATCAATAGTCCGAATTAAAAAGACAAGTAGTTCAAACATCCCGTTATCCATTAAGGCTAATGTTGTAAAGTAACTGACTTGATATCGTAGAAGTAAACAAAGAAACTACTGTCATCAGCGGATATGACAGGTTTAACAACCACATGAATAATAACAAAAATATTCGATACATTTAGGCTGGATCTATCATTAACAAGACAAACGAGACGGAATTC]




>consensus_10510#2
CTGAAAATATAGTGAGTTTTTTCTAGCCGTTAAGATTAGAGAAGACAAAGTCAATGTCAA
GTTTAAGATCAGATGCAGTCGATTCCTTTATACGCTTGTAGTTGTGGAGAAGGAAAGAGT
TGGAAACATCGTAGCGTTCACTCCCGCCAAGTATACACATATATTAATCAGCTAATTCTG
CCTCTTTATAGATCTACCTGTGCAGGAACTGTAATATGTAGCTTTTAATAAAGGTTTCTA
TATATTGGATCTTGTTCGATGATATCCGGGAGTTAGGGAAGATCTAGATAAGTAAATCGA
ACCGAGCACAGCGGTGTTCTGAGATAACCACGTTGAGCAAAAAGAAATTGAGTTCAAGAC
ACTTTTAATTAACCAGTATTCCGAATCAATAGTCCGAATTAAAAAGACAAGTAGTTCAAA
CATCCCGTTATCCATTAAGGCTAATGTTGTAAAGTAACTGACTTGATATCGTAGAAGTAA
ACAAAGAAACTACTGTCATCAGCGGATATGACAGGTTTAACAACCACATGAATAATAACA
AAAATATTCGATACATTTAGGCTGGATCTATCATTAACAAGACAAACGAGACGGAATTC

consensusID : consensus_10510#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 376
fasta sequence

                              [TTATATGATGAGTGTACGACACCTCTTATGAATTGTTGATTTGTCTTTCACACTGATCACTATTTTATGCAGCTGATGAGAAGCTGTAGTATAGAATGAAGTCATTTTATTCTGCAAACCTTGTTGTCCTTGCTCTGTTTAAATGTATCAAGGGATCTGGTTGTATGACATTTAATGTTTGCCTAAGCTTTTGTGTATGGAAAACAAGTTGTGATTGACAATTAGAGGTATGTGGGACTTCTAGATCGTGTGTTTTGTGATTTGGCTTAATTTGTAGTTCTATGTAAATCGGCATCTAGGTATGTGGTACGCTAGCTAATTTAGCCTACAGTGGTTGTGGAGATGGGAATACGTGCGAGTAGGATAGGGTGTAGCT]

[-] EMBL CD184715             [TTATATGATGAGTGTACGACACCTCTTATGAATTGTTGATTTGTCTTTCACACTGATCACTATTTTATGCAGCTGATGAGAAGCTGTAGTATAGAATGAAGTCATTTTATTCTGCAAACCTTGTTGTCCTTGCTCTGTTTAAATGTATCAAGGGATCTGGTTGTATGACATTTAATGTTTGCCTAAGCTTTTGTGTATGGAAAACAAGTTGTGATTGACAATTAGAGGTATGTGGGACTTCTAGATCGTGTGTTTTGTGATTTGGCTTAATTTGTAGTTCTATGTAAATCGGCATCTAGGTATGTGGTACGCTAGCTAATTTAGCCTACAGTGGTTGTGGAGATGGGAATACGTGCGAGTAGGATAGGGTGTAGCT]




>consensus_10510#3
TTATATGATGAGTGTACGACACCTCTTATGAATTGTTGATTTGTCTTTCACACTGATCAC
TATTTTATGCAGCTGATGAGAAGCTGTAGTATAGAATGAAGTCATTTTATTCTGCAAACC
TTGTTGTCCTTGCTCTGTTTAAATGTATCAAGGGATCTGGTTGTATGACATTTAATGTTT
GCCTAAGCTTTTGTGTATGGAAAACAAGTTGTGATTGACAATTAGAGGTATGTGGGACTT
CTAGATCGTGTGTTTTGTGATTTGGCTTAATTTGTAGTTCTATGTAAATCGGCATCTAGG
TATGTGGTACGCTAGCTAATTTAGCCTACAGTGGTTGTGGAGATGGGAATACGTGCGAGT
AGGATAGGGTGTAGCT

consensusID : consensus_10510#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 304
fasta sequence

                              [AATTTTTTTCACCAGGGTTTTGCCCATTGTCCTTGGTTGTAATTCCGAAATTCCCAGTTCCAGTTATCCTTCCCGATTTGTTGTTGCGCCAGTTAATTTCGAATTGGTTATTTTCACCATTCGATTGGCGAATGTTGATGGGTGTGGTTTCCCATTTGGTGGTTTGTAGACTGGAATGTGTCCTACGAGTTCATAGTCCCACTCTATTCTGGCTGTCTGTAAAGAGTGTAGTGAAAAGAGAATTCTAAGGATGTAAAAGATAATATGTAATACATTTTACGAGAAACTAAAAAAAAAAAAAAAA]

[-] EMBL AI395189             [AATTTTTTTCACCAGGGTTTTGCCCATTGTCCTTGGTTGTAATTCCGAAATTCCCAGTTCCAGTTATCCTTCCCGATTTGTTGTTGCGCCAGTTAATTTCGAATTGGTTATTTTCACCATTCGATTGGCGAATGTTGATGGGTGTGGTTTCCCATTTGGTGGTTTGTAGACTGGAATGTGTCCTACGAGTTCATAGTCCCACTCTATTCTGGCTGTCTGTAAAGAGTGTAGTGAAAAGAGAATTCTAAGGATGTAAAAGATAATATGTAATACATTTTACGAGAAACTAAAAAAAAAAAAAAAA]




>consensus_10510#4
AATTTTTTTCACCAGGGTTTTGCCCATTGTCCTTGGTTGTAATTCCGAAATTCCCAGTTC
CAGTTATCCTTCCCGATTTGTTGTTGCGCCAGTTAATTTCGAATTGGTTATTTTCACCAT
TCGATTGGCGAATGTTGATGGGTGTGGTTTCCCATTTGGTGGTTTGTAGACTGGAATGTG
TCCTACGAGTTCATAGTCCCACTCTATTCTGGCTGTCTGTAAAGAGTGTAGTGAAAAGAG
AATTCTAAGGATGTAAAAGATAATATGTAATACATTTTACGAGAAACTAAAAAAAAAAAA
AAAA

consensusID : consensus_10510#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 262
fasta sequence

                              [GGGTCATTTTGTTTTCAGGGATGCTTGACGCATTGTCTGCAAGCCTACAGGTGAATGTGGCGACCGTGTGCGTAGTGTGTAATGTCCTGGCTGACCGATGGTGATGGGTTTGTGCGGAACTGCTGAGTTTTGGTGGTAAGTCGATGATAATTGTATTTATTTATTGGTTGAAATAGGTCTTCTGTGTTCACGGTGCGGATCAAGTCGTATTTGTTATCATAAGGTTTTGACCAATGTTCGTGGATATTAGTGCGGCAATTCC]

[+] EMBL CD067078             [GGGTCATTTTGTTTTCAGGGATGCTTGACGCATTGTCTGCAAGCCTACAGGTGAATGTGGCGACCGTGTGCGTAGTGTGTAATGTCCTGGCTGACCGATGGTGATGGGTTTGTGCGGAACTGCTGAGTTTTGGTGGTAAGTCGATGATAATTGTATTTATTTATTGGTTGAAATAGGTCTTCTGTGTTCACGGTGCGGATCAAGTCGTATTTGTTATCATAAGGTTTTGACCAATGTTCGTGGATATTAGTGCGGCAATTCC]




>consensus_10510#5
GGGTCATTTTGTTTTCAGGGATGCTTGACGCATTGTCTGCAAGCCTACAGGTGAATGTGG
CGACCGTGTGCGTAGTGTGTAATGTCCTGGCTGACCGATGGTGATGGGTTTGTGCGGAAC
TGCTGAGTTTTGGTGGTAAGTCGATGATAATTGTATTTATTTATTGGTTGAAATAGGTCT
TCTGTGTTCACGGTGCGGATCAAGTCGTATTTGTTATCATAAGGTTTTGACCAATGTTCG
TGGATATTAGTGCGGCAATTCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10510#1      GCCAANAATTTGGCACGAGGGCGCTCACGATGTAGGTGGGTGCTTTGTTTAGCCGAAAAA 60
consensus_10510#5      ------------------------------------------------------------
consensus_10510#4      ------------------------------------------------------------
consensus_10510#3      ------------------------------------------------------------
consensus_10510#0      ------------------------------------------------------------
consensus_10510#2      ------------------------------------------------------------
                                                                                   

consensus_10510#1      CAAACGATTGAGTATGATAACGAACACTCGTGAACGCATCATTCGTAGATAACAGAAAAC 120
consensus_10510#5      ------------------------------------------------------------
consensus_10510#4      ------------------------------------------------------------
consensus_10510#3      ------------------------------------------------------------
consensus_10510#0      ------------------------------------------------------------
consensus_10510#2      ------------------------------------------------------------
                                                                                   

consensus_10510#1      CTATGTGTGATGTATCAAATTCTATGCACGGATGAGAAGCTGTAGTATAGAATGAAGTCA 180
consensus_10510#5      ------------------------------------------------------------
consensus_10510#4      ------------------------------------------------------------
consensus_10510#3      ------------------------------------------------------------
consensus_10510#0      ------------------------------------------------------------
consensus_10510#2      ------------------------------------------------------------
                                                                                   

consensus_10510#1      TTTTATTCTGCAAACCTTGTTGTCCTTGCTCTGTTTAAATGTATCAAGGGATCTGGTTGT 240
consensus_10510#5      ------------------------------------------------------------
consensus_10510#4      ------------------------------------------------------------
consensus_10510#3      ------------------------------------------------------------
consensus_10510#0      ------------------------------------------------------------
consensus_10510#2      ----------------------------------------CTGAAAATATAGTGAGTTTT 20
                                                                                   

consensus_10510#1      ATGACATTTAATGTTTGCCTAAGCTTTTGTGTATGGAAAACAAGTTGTGATTGACAATTA 300
consensus_10510#5      ------------------------------------------------------------
consensus_10510#4      ------------------------------------------------------------
consensus_10510#3      ------------------------------------------------------------
consensus_10510#0      -----------------------AACAAAGACAATGTCAAGTTTAAGATCAGATGCAGTC 37
consensus_10510#2      TTCTAGCCGTTAAGATTAGAGAAGACAAAGTCAATGTCAAGTTTAAGATCAGATGCAGTC 80
                                                                                   

consensus_10510#1      GAGGTATGTGGGACTTCTAGATCGTGTGTTTTGTGATTTGGCTTAATTTGTAGTTCTATG 360
consensus_10510#5      ------------------------------------------------------------
consensus_10510#4      ------------------------------------------------------------
consensus_10510#3      ------------------------------------------------------------
consensus_10510#0      GATTCCTTTATACGCTTGTAGTTGTGGAGAAGGAAAAAGTTGGAAAAATCA-AGCGTTCA 96
consensus_10510#2      GATTCCTTTATACGCTTGTAGTTGTGGAGAAGGAAAGAGTTGGAAACATCGTAGCGTTCA 140
                                                                                   

consensus_10510#1      TAAATCGGCATCTAGGTATGTGGTACGCTAGCTAATTTAGCCTACAGTGGTTGTGGAGAT 420
consensus_10510#5      ------------------------------------------------------------
consensus_10510#4      ------------------------------------------------------------
consensus_10510#3      ------------------------------------------------------------
consensus_10510#0      CTCCCACCAA-----------------------------------------ATCTAACTG 115
consensus_10510#2      CTCCCGCCAAGTATACACATATATTAATCAGCTAATTCTGCCTCTTTATAGATCTACCTG 200
                                                                                   

consensus_10510#1      GGGAATACGTGCGAGTAGGATAGGGTGTAGCTGAGGAATTTCCCAGGGGTCATTTTGTTT 480
consensus_10510#5      ----------------------------------------------GGGTCATTTTGTTT 14
consensus_10510#4      -----------------------------------------------AATTTTTTTCACC 13
consensus_10510#3      ---------TTATATGATGAGTGTACGACACCTCTTATGAATTGTTGATTTGTCTTTCAC 51
consensus_10510#0      TGAAGGAACTGTAATATGTTGCTTTTAATAAAGGTTTCTATATATTGGATCTTGTTCGAT 175
consensus_10510#2      TGCAGGAACTGTAATATGTAGCTTTTAATAAAGGTTTCTATATATTGGATCTTGTTCGAT 260
                                                                        *  * **    

consensus_10510#1      TCAGGGA--TGCTTGACG-CATTGTCTGCAAGCC--TACAGGTGAATGTGGCGACCGTG- 534
consensus_10510#5      TCAGGGA--TGCTTGACG-CATTGTCTGCAAGCC--TACAGGTGAATGTGGCGACCGTG- 68
consensus_10510#4      AGGGTTT--TGCCCATTGTCCTTGGTTGTAATTC--CGAAATTCCCAGTTCCAGTTATCC 69
consensus_10510#3      ACTGATCACTATTTTATGCAGCTGATGAGAAGCTG-TAGTATAGAATGAAGTCATTTTAT 110
consensus_10510#0      GATATCCGGGAGTTAGGGAAGAACTAGATAAGTAAAACGAACCAAGCACAGCGCTGTACC 235
consensus_10510#2      GATATCCGGGAGTTAGGGAAGATCTAGATAAGTAAATCGAACCGAGCACAGCGGTGTTCT 320
                                        *           **                             

consensus_10510#1      TGCGTAG--TGTGTAGT----GTCCTGGCTGACCG----------ATGGTGATGGGTTTG 578
consensus_10510#5      TGCGTAG--TGTGTAAT----GTCCTGGCTGACCG----------ATGGTGATGGGTTTG 112
consensus_10510#4      TTCCCGA--TTTGTTGTT---GCGCCAGTTAATTT----------CGAATTGGTTATTTT 114
consensus_10510#3      TCTGCAAACCTTGTTGTCCTTGCTCTGTTTAAATGTA-------TCAAGGGATCTGGTTG 163
consensus_10510#0      GAGATAA-CCACGTTGAGCAAAAAGAAATTGAGTTCAAGACACTTTTAGTTAAACAGTAT 294
consensus_10510#2      GAGATAA-CCACGTTGAGCAAAAAGAAATTGAGTTCAAGACACTTTTAATTAACCAGTAT 379
                                   **               * *                         *  

consensus_10510#1      TGCGG---AACTG-CTGAGTTTTGGTGGT------------------------------- 603
consensus_10510#5      TGCGG---AACTG-CTGAGTTTTGGTGGTAAGTCGATGATAATTGTATTTATTTATTGGT 168
consensus_10510#4      CACCATTCGATTG-GCGAATGTTGATGGGT-GTGGTTTCCCATT-TGGTGGTTTGTAGAC 171
consensus_10510#3      TATGA--CATTTA-ATGTTTGCCTAAGCTTTTGTGTATGGAAAACAAGTTGTG-ATTGAC 219
consensus_10510#0      TACGAATCAATAGAACGAATTAGAAAGAAAAGTAGTTCAAACATACCGTTATCCATTAAG 354
consensus_10510#2      TCCGAATCAATAGTCCGAATTAAAAAGACAAGTAGTTCAAACATCCCGTTATCCATTAAG 439
                                       *  *      *                                 

consensus_10510#1      ---------------CTTCTGTGTTCACGGTGCGGATCAGGTC---GTATTTGTTATCAG 645
consensus_10510#5      -----TGAAATAGGTCTTCTGTGTTCACGGTGCGGATCAAGTC---GTATTTGTTATCAT 220
consensus_10510#4      -----TGGAATGTGTCCTACGAGTTCATAGTCCCACTCTATTC---TGGCTGTCTGTAAA 223
consensus_10510#3      -----AATTAGAGGTATGTGGGACTTCTAGATCGTGTGTTTTG---TGATTTGGCTTAAT 271
consensus_10510#0      GCTAATGTTGGAAAGTAACTGACTTGATATCGTAGAAGTAAACAAAGAAACTACTGTCAT 414
consensus_10510#2      GCTAATGTTGTAAAGTAACTGACTTGATATCGTAGAAGTAAACAAAGAAACTACTGTCAT 499
                                           *   *                               * * 

consensus_10510#1      AAG--GTTTTGACCAATG-------TTCGTGGATATTAGTGCGGAAATTCCAGTTTCAGG 696
consensus_10510#5      AAG--GTTTTGACCAATG-------TTCGTGGATATTAGTGCGGCAATTCC--------- 262
consensus_10510#4      GAGT-GTAGTGAAAAGAGAA----TTCTAAGGATGTAAAAGATAATATGTAATACATTTT 278
consensus_10510#3      TTGTAGTTCTATGTAAATCG----GCATCTAGGTATGTGGTACGCTAGCTAATTTAGCCT 327
consensus_10510#0      CAGCGGATATGACAGGTTTAACAACCACATGAATAATAACAATAATATTCGCTACATTTA 474
consensus_10510#2      CAGCGGATATGACAGGTTTAACAACCACATGAATAATAACAAAAATATTCGATACATTTA 559
                         *  *   *                       *            *             

consensus_10510#1      TATTCGTGCCGGTTTGTTGTTGCGACAGGTTATTTCGAATTGGTTGTTTTCAGCATTCGA 756
consensus_10510#5      ------------------------------------------------------------
consensus_10510#4      ACGAGAAACTAAAAAAAAAAAAAAAA---------------------------------- 304
consensus_10510#3      ACAGTGGTTGTGGAGATGGGAATACGTGCGAGTAGGATAGGGTGTAGCT----------- 376
consensus_10510#0      GGCTGCGACTATCATTAACAAGACAAACAAGATGGAATACAACGCTTACAGAAGGTACAT 534
consensus_10510#2      GGCTGGATCTATCATTAACAAGACAAACGAGACGGAATTC-------------------- 599
                                                                                   

consensus_10510#1      TTGGCGAATGTTGATGGGTGTGGTTTTCCATTTGGTGGTTTGTAGACTGGAATGTGTCCT 816
consensus_10510#5      ------------------------------------------------------------
consensus_10510#4      ------------------------------------------------------------
consensus_10510#3      ------------------------------------------------------------
consensus_10510#0      GGTCACACTGACGAGCTCACGATGTAGGTGGGTGCTTTGTTTAGCCGAAAAACAAACGAT 594
consensus_10510#2      ------------------------------------------------------------
                                                                                   

consensus_10510#1      ACGAGTTCATAGTGCCACTCTATTCTGGCTGTCTGTAAAGAGTGTAATGAAAAGAGAATT 876
consensus_10510#5      ------------------------------------------------------------
consensus_10510#4      ------------------------------------------------------------
consensus_10510#3      ------------------------------------------------------------
consensus_10510#0      TGCGTATGATAACGAACACTCGTGAACGCTTCATTCGTACATCTCAGAAAACCTATGTGT 654
consensus_10510#2      ------------------------------------------------------------
                                                                                   

consensus_10510#1      GTAAGGATGTAAAAGATAATATGTAATACC------------------------------ 906
consensus_10510#5      ------------------------------------------------------------
consensus_10510#4      ------------------------------------------------------------
consensus_10510#3      ------------------------------------------------------------
consensus_10510#0      GATGTATCAAATTCTATGCACGGATGAGAAGCTGTAGTATAGAATGAAGTCATTTTATTC 714
consensus_10510#2      ------------------------------------------------------------
                                                                                   

consensus_10510#1      ------------------------------------------------------------
consensus_10510#5      ------------------------------------------------------------
consensus_10510#4      ------------------------------------------------------------
consensus_10510#3      ------------------------------------------------------------
consensus_10510#0      TGCAAACCTTGTTGTCCTTGCTCTGTTTAAATGTATCAAGGGATCTGGTTGTATGAACAT 774
consensus_10510#2      ------------------------------------------------------------
                                                                                   

consensus_10510#1      ------------------------------------------------------------
consensus_10510#5      ------------------------------------------------------------
consensus_10510#4      ------------------------------------------------------------
consensus_10510#3      ------------------------------------------------------------
consensus_10510#0      TTAATGTTTGCCTAAGCTTTTGTGTATGGAAAAACAAGTTTGTGATTGACAATTAGAGGT 834
consensus_10510#2      ------------------------------------------------------------
                                                                                   

consensus_10510#1      ------------------------------------------------------------
consensus_10510#5      ------------------------------------------------------------
consensus_10510#4      ------------------------------------------------------------
consensus_10510#3      ------------------------------------------------------------
consensus_10510#0      ATGTGGGACTTCTAGATCGTGTCTCGTGATTTGGCTTAATTTGTAGTTCTATGTAAATCG 894
consensus_10510#2      ------------------------------------------------------------
                                                                                   

consensus_10510#1      ------------------
consensus_10510#5      ------------------
consensus_10510#4      ------------------
consensus_10510#3      ------------------
consensus_10510#0      GCATCTAGGTATGTGGTA 912
consensus_10510#2      ------------------