cluster # 10513

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Schistosoma mansoni
cluster # 10513 cluster # 10513 Sequences # 17 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10513#0 length = 1569 sequences # 14
consensus_10513#1 length = 380 sequences # 1

consensus_10513#2 length = 279 sequences # 1
consensus_10513#3 length = 265 sequences # 1

consensusID : consensus_10513#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1569
fasta sequence

                              [CATATATATGTGTTAATACCATGATTATTAGATTATCATTTATTCATCTAGTATTACTAATATGTTTTGTAAATTTTCTAATCTGTATACCAACTAACAACACAAATGTTACCGGTAATACAACTGTTACTACTATTACTACTCCCGCAACTACTAGTACTACTACAACTACTACTACTCCCATCAGTAATAATACCACCCCTGTTACCACTACTGTTACTACTGCTACTACTACTTCTACTACTCCTACCACTATTACTATTTCTGATAATGCTTCTACCAGTTATACTGCTATTTCTTCGACTACTCCCACTGTTATCACTCCTCCTACCTCTTCTATTACTTATACTACTACCACCCCTTCCACCTCTACTATTACTACTGCTAATACTTCCACTAACACTACTACCATTACCTCCACAACTACTCCTCCTCCCATTGTTTCTACTATTCCTGATAATGCTTCTATCAGTACTAGTCCTTCTCCTTCTAACATCACCACCACTACTACTACTCTTAACATTACGATTACTACTGCTACTACAACCACTAATAATAATATTACTATTCCTGCTAGTACTAATGGTAACACAACTACTACTCCTACTGATACCCATTACTGGTGAAACCACTATTAGTACTGTTACAAGCAACGAAGAAACATCTACAGAAAAATCTAATGAAGATGTCGAGATGTCAAGTGGAACAACATATACACCAAGTACTTCAAATAATTCTTCTGG-AAAAATGACAACCTCTACAACACCTGAAACAAACTCACAGGAATCGACTGCGGCAATGGTGCAAGTAAATAACGGATCAGAGTCTTTGATGACAACAGTGTCCAATTCGACAGTAAATCTCGAAACAGAATCAACGCCACCAAACGCCACTGAAGAAATAACGGTATCTACATCCGAGTCACCAGAAGCGTCGACCTCATCTGGGTTAACAACACCAGTAGCAACAACTGAGTCGACAGCGTCTTCATATTCCTCACCAATAGAGACATCTACGTTAACAACAACGACGATTCAGAGTTCATTACCAATGTCAAC-AAATGAACCATCCCTATCAACAACATCTATGGAGCTTCAATCAGTGGGGACATCTGAGCTCATAAATTCAACGACATCCCAATCAAATATGTCATCAGAACCAACCACAACTCTGGGATCAGAGTCAACAGAAAAAGAATTGGGATCTGGTACATCTATGTTAATACAGCCAACGACCCCATCTGTATCAACGACATCCCAATCAAATGTGTCATCAGAACCAACTACAACTCTGGAATCAGGGTTAACAGAAAATAAATTGGGATCTGGTGCATCTATGTCAATACAGCCAACAACCCCATCTGTATCAACAACAGAAACAGAGCCTACGGTTACGGAAACCTTACAGTCTGAAACAGAAACTAGTTCACATAATGAATGACAGTGATTTATTGATTAAATTATTTTACATCATTGAATAACTATTTAAACAAGTTGAGTTGTAATACTAAGTTATAAAAATTTTCAATATTGTATTACAGCTATTTTTCTTATATTCATAGATAAATAA]

[+] EMBL BF936821             [CATATATATGTGTTAATACCATGATTATTAGATTATCATTTATTCATCTAGTATTACTAATATGTTTTGTAAATTTTCTAATCTGTATACCAACTAACAACACAAATGTTACCGGTAATACAACTGTTACTACTATTACTACTCCCGCAACTACTAGTACTACTACAACTACTACTACTCCCATCAGTAATAATACCACCCCTGTTACCACTACTGTTACTACTGCTACTACTACTTCTACTACTCCTACCACTATTACTATTTCTGATAATGCTTCTACCAGTTATACTGCTATTTCTTCGACTACTCCCACTGTTATCACTCCTCCTACCTCTTCTATTACTTATACTACTACCACCCCTTCCACCTCTACTATTACTACTGCTAATACTTCCACTAACACTACTACCATTACCTCCACAACTACTCCTCCTCCCATTGTTTCTACTATTCCTGATAATGCTTCTATCAGTACTAGTCCTTCTCCTTCTAACATCACCACCACTACTACTACTCTTAACATTACGATTACTACTGCTACTACAACCACTAATAATAATATTACTATTCCTGCTAGTACTAATGGTAACACAACTACTACTCCTACTGATACCCATTACTGGTGAAACCACTATTAGTACTGTTACAAGCAACGAAGAAACATCTACAGAAAAATCTAATGAAGATGTCGAGATGTCAAGTGGAACAACATATACACCAAGTACTTCAAATAATTCTTCTGGAAAAAATGAC ACCTCTACAACACCTGAAACAAACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL SMSERTHRP            [                                                                                                                                                                                                                                                                                                                                                                                aCTATTATTACTACTGCTAATACTTCCACTAACACTACTACCATTACCTCCACAACTACTCCTCCTCCCATTGTTTCTACTATTCCTGATAATGCTTCTATCAGTACTAGTCCTTCTCCTTCTAACATCACCACCACTACTACTACTCTTAACATTACGATTACTACTGCTACTACAACCACTAATAATAATATTACTATTCCTGCTAGTACTAATGGTAACACAACTACTACTCCTACTGATA CCATTACTGGTGAAACCACTATTAGTACTGTTACAAGCAACGAAGAAACATCTACAGAAAAATCTAATGAAGATGTCGAGATGTCAAGTGGAACAACATATACACCAAGTACTTCAAATAATTCTTCTGG AAAAATGACAACCTCTACAACACCTGAAACAAACTCACAGGAATCGACTGCGGCAATGGTGCAAGTAAATAACGGATCAGAGTCTTTGATGACAACAGTGTCCAATTCGACAGTAAATCTCGAAACAGAATCAACGCCACCAAACGCCACTGAAGAAATAACGGTATCTACATCCGAGTCACCAGAAGCGTCGACCTCATCTGGGTTAACAACACCAGTAGCAACAACTGAGTCGACAGCGTCTTCATATTCCTCACCAATAGAGACATCTACGTTAACAACAACGACGATTCAGAGTTCATTACCAATGTCAAC AAATGAACCATCCCTATCAACAACATCTATGGAGCTTCAATCAGTGGGGACATCTGAGCTCATAAATTCAACGACATCCCAATCAAATATGTCATCAGAACCAACCACAACTCTGGGATCAGAGTCAACAGAAAAAGAATTGGGATCTGGTACATCTATGTTAATACAGCCAACGACCCCATCTGTATCAACGACATCCCAATCAAATGTGTCATCAGAACCAACTACAACTCTGGAATCAGGGTTAACAGAAAATAAATTGGGATCTGGTGCATCTATGTCAATACAGCCAACAACCCCATCTGTATCAACAACAGAAACAGAGCCTACGGTTACGGAAACCTTACAGTCTGAAACAGAAACTAGTTCACATAATGAATGACAGTGATTTATTGATTAAATTATTTTACATCATTGAATAACTATTTAAACAAGTTGAGTTGTAATACTAAGTTATAAAAATTTTCAATATTGTATTACAGCTATTTTTCTTATATTCATAGATAAATA ]
[-] EMBL CD067970             [                                                                                                                                                                                                                                                                                                                                                                                         ACTACTGCTAATACTTCCACTAACACTACTACCATTACCTCCACAACTACTCCTCCTCCCATTGTTTAAAATATTCCTGATAATGCTTCTATCAGTACTAGTCCTTCTCCTTCTAACATCACCACCACTACTACTACTCTTAACATTACGATTACTACTGCTACTACAACCACTAATAATAATATTACTATTCCTGCTAGTACTAATGGTGGCTCAACTACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD127926             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      gtaggtAGAAAAATCT ATGTAGA GTCGAGATGTCAAGTGGAACACCATATACACCAAGTACTTCAAATAATTCTTCTGG AAAAATGACAACCTCTACAACACCTGAAACAAACTCACAGGAATCGACTGCGGCAATGGTGCAAGTAAATAACGGATCAGAGTCTTTGATGACAACAGTGTCCAATTCGACAGTAAATCTCGAAACAGAATCAACGCCACCAAACGCCACTGAAGAAATAACGGTATCTACATCCGAGTCACCAGAAGCGTCGACCTCATCTGGGTTAACAACACCAGTAGCAACAACTGAGTCGACAGCGTCTTCATATTCCTCACCAATAGAGACATCTACGTTAACAACAACGACGATTCAGAGTTCATTACCAATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD129044             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GAAAAATCTAATGAAGATGTCGAGATGTCAAGTGGAACAACATATACACCAAGTACTTCAAATAATTCTTCTGG AAAAATGACAACCTCTACAACACCTGAAACAAACTCACAGGAATCGACTGCGGCAATGGTGCAAGTAAATAACGGATCAGAGTCTTTGATGACAACAGTGTCCAATTCGACAGTAAATCTCGAAACAGAATCAACGCCACCAAACGCCACTGAAGAAGTAACGGTATCTACATCCGAGTCACCAGAAGCGTCGACCTCATCTGAGTTAACAACACCAGTAGCAACAACTGAGTCGACAGCGTCTTCATATTCCTCACCAATAGAGACATCTACGTTAACAACAACGACGATTCAGAGTTCATTACCAATGTCAAC AAATGAACCATCCCTATCAACAACATCTATGGAGCTTCGATCAGTGGGGACATCTGAGCTCATAAATTCAACGACATCCCAATCAA                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD059822             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATATACACCAAGTACTTCAAATAATTCTTCTGG AAAAATGACAACCTCTACAACACCTGAAACAAACTCACAGGAATCGACTGCGGCAATGGTGCAAGTAAATAACGGATCAGAGTCTTTGATGACAACAGTGTCCAATTCGACAGTAAATCTCGAAACAGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD127350             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAATGACAACCTCTACAACACCTGAAACAAACTCACAGGAATCGACTGCGGCAATGGTGCAAGTAAATAACGGATCAGAGTCTTTGATGACAACAGTGTCCAATTCGACAGTAAATCTCGAAACAGAATCAACGCCACCAAACGCCACTGAAGAAATAACGGTATCTACATCCGAGTCACCAGAAGCGTCGACCTCATCTGGGTTAACAACACCAGTAGCAACAACTGAGTCGACAGCGTCTTCATATTCCTCACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD127801             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAACCTCTACAACACCTGAAACAAACTCACAGGAATCGACTGCGGCAATGGTGCAAGTAAATAACGGATCAGAGTCTTTGATGACAACAGTGTCCAATTCGACAGTAAATCTCGAAACAGAATCAACGCCACCAAACGCCACTGAAGAAATAACGGTATCTACATCCGAGTCACCAGAAGCGTCGACCTCATCTGGGTTAACAACACCAGTAGCAACAACTGAGTCGACAGCGTCTTCATATTCCTCACCAATAGAGACATCTACGTTAACAACAACGACGATTCAGAGTTCATTACCAAAGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BG931727             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTCCAATTCGACAGTAAATCTCGAAACAGAATCAACGCCACCAAACGCCACTGAAGAAATAACGGTATCTACATCCGAGTCACCAGAAGCGTCGACCTCATCTGGGTTAACAACACCAGTAGCAACAACTGAGTCGACAGCGTCTTCATATTCCTCACCAATAGAGACATCTACGTTAACAACAACGACGATTCAGAGTTCATTACCAATGTCAAC AAATGAACCATCCCTATCAACAACATCTATGGAGCTTCAATCAGTGGGGACATCTGAGCTCATAAATTCAACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD076163             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGCGTCTTCATATTCCTCACCAATAGAGACATCTACGTTAACAACAACGACGATTCAGAGTTCATTACCAATGTCAAC AAATGAACCATCCCTATCAACAACATCTATGGAGCTTCAATCAGTGGGGACATCTGAGCTCATAAATTCAACGACATCCCAATCAAATATGTCATCAGAACCAACCACAACTCTGGGATCAGAGTCAACAGAAAAAGAATTGGGATCTGGTACATCTATGTTAATACAGCCAACGACCCCATCTGTATCAACGACATCCCAATCAAATGTGTCATCAGAACCAACTACAACTCTGGAATCAGGGTTAACAGAAAATAAATTGGGATCTGGTGCATCTATGTCAATACAGCCAACAACCCCATCTGTATCAACAACAGAAACAGAGCCTACGGTTACGGAAACCTTACAGTCTGAAACAGAAACTAGTTCACATAATGAATGACAGTGATTTATTGATTAAATTATTTTACATCATTGAATAACTATTTAAACAAGTTGAGTTGTAATACTAAGTTATAAAAATTTTCAATATTGTATTACAGCTATTTTTCTTATATTCATAGATAAATAA]
[+] EMBL CD126759             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCAGAGTTCATTACCAATGTCAACAAAATGA  CATCCCTATCAACAACATCTATGGAGCTTCAATCAGTGGGGACATCTGAGCTCATAAATTCAACGACATCCCAATCAAATATGTCATCAGAACCAACCACAACTCTGGGATCAGAGTCAACAGAAAAAGAATTGGGATCTGGTACATCTATGTTAATACAGCCAACGACCCCATCTGTATCAACGACATCCCAATCAAATGTGTCATCAGAACCAACTACAACTCTGGAATCAGGGTTAACAGAAAATAAATTGGGATCTGGTGCATCTATGTCAATACAGCCAACAACCCCATCTGTATCAACAACAGAAACAGAGCCTACGGTTACGGAAACCTTACAGTCTGAAACAGAAACTA                                                                                                                                                  ]
[+] EMBL CD064076             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACCAATGTCAAC AAATGAACCATCCCTATCAACAACATCTATGGAGCTTCAATCAGTGGGGACATCTGAGCTCATAAATTCAACGACATCCCAATCAAATATGTCATCAGAACCAACCACAACTCTGGGATCAGAGTCAACAGAAAAAGAATTGGGATCTGGTACATCTATGTTAATACAGCCAACGACCCCATCTGTATCAACGACATCCCAATCAAATGTGTCATCAGAACCAACTACAACTCTGGAATCAGGGTTAACAGAAAATAAATTGGGATCTGGTGCATCTATGTCAATACAGCCAACAACCCCATCTGTATCAACAACAGAAACAGAGCCTACGGTTACGGAAACCTTACAGTCTGAAACAGAAGCTA                                                                                                                                                  ]
[-] EMBL CD126757             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CCAATGTCAAC AAATGAACCATCCCTATCAACAACATCTATGGAGCTTCAATCAGTGGGGACATCTGAGCTCATAAATTCAACGACATCCCAATCAAATATGTCATCAGAACCAACCACAACTCTGGGATCAGAGTCAACAGAAAAAGAATTGGGATCTGGTACATCTATGTTAATACAGCCAACGACCCCATCTGTATCAACGACATCCCAATCAAATGTGTCATCAGAACCAATTACAACTCTGGAATCAGGGTTAACAGAAAATAAATTGGGATCTGGTGCATCTATGTCAATACAGCCAACATCCCCATCTGTATCAACAACAGAAACAGAGCCTACGGTTACGGAAACCTTACAGTCTGAAACAGAAACTAG                                                                                                                                                 ]
[-] EMBL SMT14569             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACATCTATGTTAATACAGCCAACGACCCCATCTGTATCAACGACATCCCAATCAAATGTGTCATCAGAACCAACTACAACTCTGGAATCAGGGTTAACAGNAAATAAATTGGGATCTGGTGCATCTATGTCAATACAGCCNACAACCCCATCTGTATCNACNACAGAAACAGA NCTACGGTTACGGAANCCTTACAGTCTGAAACAGAAACTAGNTCACATAATGAATGACAGNGATTTATTGATTAAATTNTTTTACATCATTGAATAACTATTTAAACAAGTTGAGTTGTAATACTAAGTTATAAAAATTTTCAATA                                        ]




>consensus_10513#0
CATATATATGTGTTAATACCATGATTATTAGATTATCATTTATTCATCTAGTATTACTAA
TATGTTTTGTAAATTTTCTAATCTGTATACCAACTAACAACACAAATGTTACCGGTAATA
CAACTGTTACTACTATTACTACTCCCGCAACTACTAGTACTACTACAACTACTACTACTC
CCATCAGTAATAATACCACCCCTGTTACCACTACTGTTACTACTGCTACTACTACTTCTA
CTACTCCTACCACTATTACTATTTCTGATAATGCTTCTACCAGTTATACTGCTATTTCTT
CGACTACTCCCACTGTTATCACTCCTCCTACCTCTTCTATTACTTATACTACTACCACCC
CTTCCACCTCTACTATTACTACTGCTAATACTTCCACTAACACTACTACCATTACCTCCA
CAACTACTCCTCCTCCCATTGTTTCTACTATTCCTGATAATGCTTCTATCAGTACTAGTC
CTTCTCCTTCTAACATCACCACCACTACTACTACTCTTAACATTACGATTACTACTGCTA
CTACAACCACTAATAATAATATTACTATTCCTGCTAGTACTAATGGTAACACAACTACTA
CTCCTACTGATACCCATTACTGGTGAAACCACTATTAGTACTGTTACAAGCAACGAAGAA
ACATCTACAGAAAAATCTAATGAAGATGTCGAGATGTCAAGTGGAACAACATATACACCA
AGTACTTCAAATAATTCTTCTGGAAAAATGACAACCTCTACAACACCTGAAACAAACTCA
CAGGAATCGACTGCGGCAATGGTGCAAGTAAATAACGGATCAGAGTCTTTGATGACAACA
GTGTCCAATTCGACAGTAAATCTCGAAACAGAATCAACGCCACCAAACGCCACTGAAGAA
ATAACGGTATCTACATCCGAGTCACCAGAAGCGTCGACCTCATCTGGGTTAACAACACCA
GTAGCAACAACTGAGTCGACAGCGTCTTCATATTCCTCACCAATAGAGACATCTACGTTA
ACAACAACGACGATTCAGAGTTCATTACCAATGTCAACAAATGAACCATCCCTATCAACA
ACATCTATGGAGCTTCAATCAGTGGGGACATCTGAGCTCATAAATTCAACGACATCCCAA
TCAAATATGTCATCAGAACCAACCACAACTCTGGGATCAGAGTCAACAGAAAAAGAATTG
GGATCTGGTACATCTATGTTAATACAGCCAACGACCCCATCTGTATCAACGACATCCCAA
TCAAATGTGTCATCAGAACCAACTACAACTCTGGAATCAGGGTTAACAGAAAATAAATTG
GGATCTGGTGCATCTATGTCAATACAGCCAACAACCCCATCTGTATCAACAACAGAAACA
GAGCCTACGGTTACGGAAACCTTACAGTCTGAAACAGAAACTAGTTCACATAATGAATGA
CAGTGATTTATTGATTAAATTATTTTACATCATTGAATAACTATTTAAACAAGTTGAGTT
GTAATACTAAGTTATAAAAATTTTCAATATTGTATTACAGCTATTTTTCTTATATTCATA
GATAAATAA

consensusID : consensus_10513#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 380
fasta sequence

                              [CGGCTCTAACACTTTGTAAGCTGAACCGTTTAATGAAACAGTTCATGGTTTGGTTCAAAATTACTGCAAAAATTGAGAGAATCATCCAAATTGTCTTTCAGTCAGTCAGCGACAACGTAGGACCGGGCACATATATGCATCGGTCCAAGTTGCCATACCTCGTTAGCACAAGATGAACACCGGATTCATAGAAGTAATTAATTCAGTGGTGGTAGTATATAAAGAAAGGTTGTATATATGGATATAGTGTAGGAAGGAAAAAAGTTATGAAGCAATTTTAATCTCAAGGTTTAAGGGAAGATAAAGAGTGTATACACCTACGCCATTGTGATCGATTCTGAGCCATGTCACACAGAGTCTCCAACCATTTATTACGATAG]

[+] EMBL CD160400             [CGGCTCTAACACTTTGTAAGCTGAACCGTTTAATGAAACAGTTCATGGTTTGGTTCAAAATTACTGCAAAAATTGAGAGAATCATCCAAATTGTCTTTCAGTCAGTCAGCGACAACGTAGGACCGGGCACATATATGCATCGGTCCAAGTTGCCATACCTCGTTAGCACAAGATGAACACCGGATTCATAGAAGTAATTAATTCAGTGGTGGTAGTATATAAAGAAAGGTTGTATATATGGATATAGTGTAGGAAGGAAAAAAGTTATGAAGCAATTTTAATCTCAAGGTTTAAGGGAAGATAAAGAGTGTATACACCTACGCCATTGTGATCGATTCTGAGCCATGTCACACAGAGTCTCCAACCATTTATTACGATAG]




>consensus_10513#1
CGGCTCTAACACTTTGTAAGCTGAACCGTTTAATGAAACAGTTCATGGTTTGGTTCAAAA
TTACTGCAAAAATTGAGAGAATCATCCAAATTGTCTTTCAGTCAGTCAGCGACAACGTAG
GACCGGGCACATATATGCATCGGTCCAAGTTGCCATACCTCGTTAGCACAAGATGAACAC
CGGATTCATAGAAGTAATTAATTCAGTGGTGGTAGTATATAAAGAAAGGTTGTATATATG
GATATAGTGTAGGAAGGAAAAAAGTTATGAAGCAATTTTAATCTCAAGGTTTAAGGGAAG
ATAAAGAGTGTATACACCTACGCCATTGTGATCGATTCTGAGCCATGTCACACAGAGTCT
CCAACCATTTATTACGATAG

consensusID : consensus_10513#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 279
fasta sequence

                              [TTGCTTAATACATTAAGTCACAGACCCATTATGCAAGAGGTACGCTGTCAGGCCTCAAGGACCCTCCAACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCCTCACGGTACTAGTTCACTATCGGTCGCATACGAGTATTTAGGCTTAGAGGGTGGTCCCTATCTGCCGTGGGCGTCGAAATTTGAGAGGAGTTGACCCTAGTACGAGAGGACCGGGTTGAACATACCTCTGGTGTACCTGTCGT]

[+] EMBL CD124351             [TTGCTTAATACATTAAGTCACAGACCCATTATGCAAGAGGTACGCTGTCAGGCCTCAAGGACCCTCCAACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCCTCACGGTACTAGTTCACTATCGGTCGCATACGAGTATTTAGGCTTAGAGGGTGGTCCCTATCTGCCGTGGGCGTCGAAATTTGAGAGGAGTTGACCCTAGTACGAGAGGACCGGGTTGAACATACCTCTGGTGTACCTGTCGT]




>consensus_10513#2
TTGCTTAATACATTAAGTCACAGACCCATTATGCAAGAGGTACGCTGTCAGGCCTCAAGG
ACCCTCCAACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCACTCCCCTCATCGGGGT
GCTTTTCACCTTTCCCTCACGGTACTAGTTCACTATCGGTCGCATACGAGTATTTAGGCT
TAGAGGGTGGTCCCTATCTGCCGTGGGCGTCGAAATTTGAGAGGAGTTGACCCTAGTACG
AGAGGACCGGGTTGAACATACCTCTGGTGTACCTGTCGT

consensusID : consensus_10513#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 265
fasta sequence

                              [CCATTCACCACCACCAGAAACTACCACTATTGCTACTACTATTACTACTCCCGCAACTACTAGTACTACTACAACTACTACTACTCCCATCAGTAATAATACCACCCCTGTTACCACTACTGTTACTACTGCTACTACTACTTCTACTACTCCTACCACTATTACTATTTCTGATAATGCTTCTACCAGTTATACTGCTATTTCTTCGACTACTCCCACTGTTTCACTCCTCCTACCTCTTCTATTACTTATACTACTACCACCG]

[-] EMBL CD064001             [CCATTCACCACCACCAGAAACTACCACTATTGCTACTACTATTACTACTCCCGCAACTACTAGTACTACTACAACTACTACTACTCCCATCAGTAATAATACCACCCCTGTTACCACTACTGTTACTACTGCTACTACTACTTCTACTACTCCTACCACTATTACTATTTCTGATAATGCTTCTACCAGTTATACTGCTATTTCTTCGACTACTCCCACTGTTTCACTCCTCCTACCTCTTCTATTACTTATACTACTACCACCG]




>consensus_10513#3
CCATTCACCACCACCAGAAACTACCACTATTGCTACTACTATTACTACTCCCGCAACTAC
TAGTACTACTACAACTACTACTACTCCCATCAGTAATAATACCACCCCTGTTACCACTAC
TGTTACTACTGCTACTACTACTTCTACTACTCCTACCACTATTACTATTTCTGATAATGC
TTCTACCAGTTATACTGCTATTTCTTCGACTACTCCCACTGTTTCACTCCTCCTACCTCT
TCTATTACTTATACTACTACCACCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10513#0      CATATATATGTGTTAATACCATGATTATTAGATTATCATTTATTCATCTAGTATTACTAA 60
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      ------------------------------------------------------------
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      TATGTTTTGTAAATTTTCTAATCTGTATACCAACTAACAACAC-AAATGTT--ACCGGTA 117
consensus_10513#3      -----------------------------CCATTCACCACCACCAGAAACT--ACC---- 25
consensus_10513#1      ---------------------CGGCTCTAACACTTTGTAAGCTGAACCGTTTAATGAAAC 39
consensus_10513#2      ----------------------TTGCTTAATACATTAAGTCACAGACCCATTATGCAAGA 38
                                                      *                  *         

consensus_10513#0      ATACAACTGTTACTA-CTATTACTACTCCCGCAACTACTAGTACTACTACAACTACTACT 176
consensus_10513#3      --ACTATTGCTACTA-CTATTACTACTCCCGCAACTACTAGTACTACTACAACTACTACT 82
consensus_10513#1      AGTTCATGGTTTGGT-TCAAAATTACTGCAAAAATTGAGAGAATCATCCAAATTGTCTTT 98
consensus_10513#2      GGTACGCTGTCAGGCCTCAAGGACCCTCCAACTGCTTGTAG-GCAATCCGTTTCAGGTAC 97
                               *         *      ** *      *   **    *              

consensus_10513#0      ACTCCCATCAGTAATAATACCACCCCTGTTACCACTACTGTTACTACTGCTACTACTACT 236
consensus_10513#3      ACTCCCATCAGTAATAATACCACCCCTGTTACCACTACTGTTACTACTGCTACTACTACT 142
consensus_10513#1      CAGTCAGTCAGCGACAACGTAGGACCGGGCACATATA-TGCATCGGTCCAAGTTGCCATA 157
consensus_10513#2      TGTTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCCTCACGGTACTAGTTCACTA-- 155
                                      *        *     **   *                   * *  

consensus_10513#0      TCTACTACTCCTACCACTATTACT--ATTTCTGATAATGCTTCTAC-CAGTTATACTGCT 293
consensus_10513#3      TCTACTACTCCTACCACTATTACT--ATTTCTGATAATGCTTCTAC-CAGTTATACTGCT 199
consensus_10513#1      CCTCGTTAGCACAAGATGAACACCGGATTCATAGAAGTAATTAATT-CAGTGGTGGTAGT 216
consensus_10513#2      --TCGGTCGCATACGAGTATTTAGGCTTAGAGGGTGGTCCCTATCTGCCGTGGGCGTCGA 213
                         *      *  *  *  *        *         *   *     * **     *   

consensus_10513#0      ATTTCTTCGACTACTCCCACTGTTATCACTCCTCCTACCTCTTCTATTACTTATACTACT 353
consensus_10513#3      ATTTCTTCGACTACTCCCACTGTT-TCACTCCTCCTACCTCTTCTATTACTTATACTACT 258
consensus_10513#1      ATATAAAGAAAGGTTGTATATATG--GATATAGTGTAGGAAGGAAAAAAGTTATGAAGCA 274
consensus_10513#2      AATTTGAGAGGAGTTGACCCTAGTACGAGAGGACC--GGGTTGAACATACCTCTGGTGTA 271
                       *  *          *     *      *                    *  * *      

consensus_10513#0      ACCACCCCTTCCACCTCTACTATTACTACTGCTAATACTTCCACTAACACTACTACCATT 413
consensus_10513#3      ACCACCG----------------------------------------------------- 265
consensus_10513#1      ATTTTAATCTCAAGGTTTAAGGGAAG-ATAAAGAGTGTATACACCTACGCCATTGTGATC 333
consensus_10513#2      CCTGTCGT---------------------------------------------------- 279
                                                                                   

consensus_10513#0      ACCTCCACAACTACTCCTCCTCCCATTGTTTCTACTATTCCTGATAATGCTTCTATCAGT 473
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      GATTCTGAGCCATGTCACACAGAGTCTCCAACCATTTATTACGATAG------------- 380
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      ACTAGTCCTTCTCCTTCTAACATCACCACCACTACTACTACTCTTAACATTACGATTACT 533
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      ------------------------------------------------------------
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      ACTGCTACTACAACCACTAATAATAATATTACTATTCCTGCTAGTACTAATGGTAACACA 593
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      ------------------------------------------------------------
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      ACTACTACTCCTACTGATACCCATTACTGGTGAAACCACTATTAGTACTGTTACAAGCAA 653
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      ------------------------------------------------------------
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      CGAAGAAACATCTACAGAAAAATCTAATGAAGATGTCGAGATGTCAAGTGGAACAACATA 713
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      ------------------------------------------------------------
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      TACACCAAGTACTTCAAATAATTCTTCTGGAAAAATGACAACCTCTACAACACCTGAAAC 773
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      ------------------------------------------------------------
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      AAACTCACAGGAATCGACTGCGGCAATGGTGCAAGTAAATAACGGATCAGAGTCTTTGAT 833
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      ------------------------------------------------------------
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      GACAACAGTGTCCAATTCGACAGTAAATCTCGAAACAGAATCAACGCCACCAAACGCCAC 893
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      ------------------------------------------------------------
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      TGAAGAAATAACGGTATCTACATCCGAGTCACCAGAAGCGTCGACCTCATCTGGGTTAAC 953
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      ------------------------------------------------------------
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      AACACCAGTAGCAACAACTGAGTCGACAGCGTCTTCATATTCCTCACCAATAGAGACATC 1013
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      ------------------------------------------------------------
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      TACGTTAACAACAACGACGATTCAGAGTTCATTACCAATGTCAACAAATGAACCATCCCT 1073
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      ------------------------------------------------------------
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      ATCAACAACATCTATGGAGCTTCAATCAGTGGGGACATCTGAGCTCATAAATTCAACGAC 1133
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      ------------------------------------------------------------
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      ATCCCAATCAAATATGTCATCAGAACCAACCACAACTCTGGGATCAGAGTCAACAGAAAA 1193
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      ------------------------------------------------------------
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      AGAATTGGGATCTGGTACATCTATGTTAATACAGCCAACGACCCCATCTGTATCAACGAC 1253
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      ------------------------------------------------------------
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      ATCCCAATCAAATGTGTCATCAGAACCAACTACAACTCTGGAATCAGGGTTAACAGAAAA 1313
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      ------------------------------------------------------------
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      TAAATTGGGATCTGGTGCATCTATGTCAATACAGCCAACAACCCCATCTGTATCAACAAC 1373
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      ------------------------------------------------------------
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      AGAAACAGAGCCTACGGTTACGGAAACCTTACAGTCTGAAACAGAAACTAGTTCACATAA 1433
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      ------------------------------------------------------------
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      TGAATGACAGTGATTTATTGATTAAATTATTTTACATCATTGAATAACTATTTAAACAAG 1493
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      ------------------------------------------------------------
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      TTGAGTTGTAATACTAAGTTATAAAAATTTTCAATATTGTATTACAGCTATTTTTCTTAT 1553
consensus_10513#3      ------------------------------------------------------------
consensus_10513#1      ------------------------------------------------------------
consensus_10513#2      ------------------------------------------------------------
                                                                                   

consensus_10513#0      ATTCATAGATAAATAA 1569
consensus_10513#3      ----------------
consensus_10513#1      ----------------
consensus_10513#2      ----------------