These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10521#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1136 fasta sequence [CATGCGACTAAAAAGTTCAAACACAGTGAATCCAATGAGGAATCGAATGAAAATCATGACAAGCGCAAACAAGTTGACGCACATGTTCAAGCTTTCCTCAAGGCTGTGCTTGACCATGCCCATGGTGGTACTGTCCGGCAGACAAACAATCCAAACAAAAAAGATAAATCTGTGATAAAAAAGGATGCTTTCACTCAGACAGACGAACAGAATGACTTTGACTTTGAATCGTGTTCGTACAACCCAGATCAGTCAGTTTCTGAATATATGGGTTGCAACAAGAATGAACAAAGTAGTCGAGTTCCTAATCGAGAAATGTACAGCGAGGAAGCGTTAAATTTACTTTCCCAACAGAGTTTTTATTCTGAAGAAGCACAAAATGATCTCTCTTTGAATGACAACTCCATCCACTGCTATTCCACTCAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTT-AAAAAATATGAAGACTGG-TTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA-TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTATCGCTGTATCCAAATCACACATTTATCCCTACCACCATTAATACAACCATGCCTAATGCAGTCGTTTCATACTCATCTAATTTCGCCAACCAGCTAGGTGCTTCTACAGTGTCATTTCCACCAAACGTAACCAGTACCACTACAACGTGCAATACAACGAGCTTTCACGTAGGCACATCATTTCCTATACCTCCGACTATTCAACAAAATCATTCCATCACTTCCTTCGCAGATCTACCCAGTGAGTTACAAACATCTGCAATGCTTGCCAC] [+] EMBL CD116985 [CATGCGACTAAAAAGTTCAAACACAGTGAATCCAATGAGGAATCGAATGAAAATCATGACAAGCGCAAACAAGTTGACGCACATGTTCAAGCTTTCCTCAAGGCTGTGCTTGACCATGCCCATGGTGGTACTGTCCGGCAGACAAACAATCCAAACAAAAAAGATAAATCTGTGATAAAAAAGGATGCTTTCACTCAGACAGACGAACAGAATGACTTTGACTTTGAATCGTGTTCGTACAACCCAGATCAGTCAGTTTCTGAATATATGGGTTGCAACAAGAATGAACAAAGTAGTCGAGTTCCTAATCGAGAAATGTACAGCGAGGAAGCGTTAAATTTACTTTCCCAACAGAGTTTTTATTCTGAAGAAGCACAAAATGATCTCTCTTTGAATGACAACTCCATCCACTGCTATTCCACTCAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGGCATAGACGAATGGGTT AA ] [+] EMBL CD116988 [CATGCGACTAAAAAGTTCAAACACAGTGAATCCAATGAGGAATCGAATGAAAATCATGACAAGCGCAAACAAGTTGACGCACATGTTCAAGCTTTCCTCAAGGCTGTGCTTGACCATGCCCATGGTGGTACTGTCCGGCAGACAAACAATCCAAACAAAAAAGATAAATCTGTGATAAAAAAGGATGCTTTCACTCAGACAGACGAACAGAATGACTTTGACTTTGAATCGTGTTCGTACAACCCAGATCAGTCAGTTTCTGAATATATGGGTTGCAACAAGAATGAACAAAGTAGTCGAGTTCCTAATCGAGAAATGTACAGCGAGGAAGCGTTAAATTTACTTTCCCAACAGAGTTTTTATTCTGAAGAAGCACAAAATGATCTCTCTTTGAATGACAACTCCATCCACTGCTATTCCACTCAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGT ] [+] EMBL CD098510 [ CAATCCAAACAAAAAAGATAAATCTGTGATAAAAAAGGATGCTTTCACTCAGACAGACGAACAGAATGACTTTGACTTTGAATCGTGTTCGTACAACCCAGATCAGTCAGTTTCTGAATATATGGGTTGCAACAAAAATGAACAAAGTAGTCGAGTTCCTAATCGAGAAATGTACAGCGAGGAAGCGTTAAATTTACTTTCCCAACAGAGTTTTTATTCTGAAGAAGCACAAAATGATCTCTCTTTGAATGACAACTCCATCCACTGCTATTCCACTCAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTT AAAAAATATGAAGACTGG TTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCC ] [+] EMBL CD117407 [ AGACGAACAGAATGACTTTGACTTTGAATCGTGTTCGTACAACCCAGATCAGTCAGTTTCTGAATATATGGGTTGCAACAAAAATGAACGAAGTAGTCGAGTTCCTAATCGAGAAATGTACAGCGAGGAAGCGTTAAATTTACTTCCCCAACAGAGTTTTTATTCTGAAGAAGCACAAAATGATCTCTCTTTGAATGACAACTCCATCCACTGCTATTCCACTCAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTT AAAAAATATGAAGACTGGTTTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACA ] [-] EMBL CD117279 [ AGTCGAGTTCCTAATCGAGAAATGTACAGCGAGGAAGCGTTAAATTTACTTTCCCAACAGAGTTTTTATTCTGAAGAAGCACAAAATGATCTCTCTTTGAATGACAACTCCATCCACTGCTATTCCACTCAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTT AAAAAATATGAAGACTGGTTTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTATCGCTGTATCAAAATCACACATTTATCCCTACCACCATTAA ] [-] EMBL CD095376 [ GTTCCTAATCGAGAAATGTACAGCGAGGAAGCGTTAAATTTACTTTCCCAACAGAGTTTTTATTCTGAAGAAGCACAAAATGATCTCTCTTTGAATGACAACTCCATCCACTGCTATTCCACTCAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTT AAAAAATATGAAGACTGG TTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTG ] [-] EMBL CD117175 [ TGTACAGCGAGGAAGCGTTAAATTTACTTTCCCAACAGAGTTTTTATTCTGAAGAAGCACAAAATGATCTCTCTTTGAATGACAACTCCATCCACTGCTATTCCACTCAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTT AAAAAATATGAAGACTGGTTTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTATCGCTGTATCAAAATCACACATTTATCCCTACCACCATTAA ] [-] EMBL CD117583 [ CAGAGTTTTTA TCAGAAGAAGCACAAAATGATCTCTCTTTGAATGACAACTCCATCCACTGCTATTCCACTCAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTT AAAAAATATGAAGACTGG TTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTATCGCTGTATCCAAATCACACATTTATCCCTACCACCATTAA ] [-] EMBL CD117246 [ CAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTT AAAAAATATGAAGACTGGTTTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTATCGCTGTATCAAAATCACACATTTATCCCTACCACCATTAA ] [-] EMBL CD178852 [ GTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTT AAAAAATATGAAGACTGG TTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTATCGCTGTATCCAAATCAC ] [-] EMBL CD114525 [ TTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTTAAAAAAATATGAAGACTGG TTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTATCGCTGTATCCAAATCACAC ] [-] EMBL CD095065 [ AATATAAAGACTGG TTTTTTCAAAACTTTGAAAGGAATGTACGAGCGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTG ] [+] EMBL CD166808 [ CAAAGTTCAGAGTCAAGTTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTGTCGCTGTATCCAAATCACACATTTATCCCTACCACCATTAATACAACCATGCCTAATGC ] [-] EMBL CD094738 [ AATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCCTGCGGTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTG ] [-] EMBL CD095262 [ TAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCTCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTATCGCTGTATCCAAATCACACATTTATCCCTACCACCATTAATACAACCATGCCTAATGCAGTCGTTTCATACTCATCTAATTTCGCCAACCAGCTAGGTGCTTCTACAGTGTCATTTCCACCAAACGTAACCAGTACCACTACAACGTGCAATACAACGAGCTTTCACGTAGGCACATCATTTCCTATACCTCCGACTATTCAACAAAATCATTCCAT ] [-] EMBL CD090333 [ CCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCNCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTATCGCTGTATCCAAATCACACATTTATCCCTACCACCATTAATACAACCATGCCTAATGCAGTCGTTTCATACTCATCTAATTTCGCCAACCCGCTAGGCGCTTATGCAGAGTCATT ] [-] EMBL CD186025 [ GTGTCATTTCCACCAAACGTAACCAGTACCACTACAACGTGCAATACAACGAGCTTTCACGTAGGCACATCATTTCCTATACCTCCGACTATTCAACAAAATCATTCCATCACTTCCTTCGCAGATCTACCCAGTGAGTTACAAACATCTGCAATGCTTGCCAC] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||