|
These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10521#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1136 fasta sequence
[CATGCGACTAAAAAGTTCAAACACAGTGAATCCAATGAGGAATCGAATGAAAATCATGACAAGCGCAAACAAGTTGACGCACATGTTCAAGCTTTCCTCAAGGCTGTGCTTGACCATGCCCATGGTGGTACTGTCCGGCAGACAAACAATCCAAACAAAAAAGATAAATCTGTGATAAAAAAGGATGCTTTCACTCAGACAGACGAACAGAATGACTTTGACTTTGAATCGTGTTCGTACAACCCAGATCAGTCAGTTTCTGAATATATGGGTTGCAACAAGAATGAACAAAGTAGTCGAGTTCCTAATCGAGAAATGTACAGCGAGGAAGCGTTAAATTTACTTTCCCAACAGAGTTTTTATTCTGAAGAAGCACAAAATGATCTCTCTTTGAATGACAACTCCATCCACTGCTATTCCACTCAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTT-AAAAAATATGAAGACTGG-TTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA-TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTATCGCTGTATCCAAATCACACATTTATCCCTACCACCATTAATACAACCATGCCTAATGCAGTCGTTTCATACTCATCTAATTTCGCCAACCAGCTAGGTGCTTCTACAGTGTCATTTCCACCAAACGTAACCAGTACCACTACAACGTGCAATACAACGAGCTTTCACGTAGGCACATCATTTCCTATACCTCCGACTATTCAACAAAATCATTCCATCACTTCCTTCGCAGATCTACCCAGTGAGTTACAAACATCTGCAATGCTTGCCAC]
[+] EMBL CD116985 [CATGCGACTAAAAAGTTCAAACACAGTGAATCCAATGAGGAATCGAATGAAAATCATGACAAGCGCAAACAAGTTGACGCACATGTTCAAGCTTTCCTCAAGGCTGTGCTTGACCATGCCCATGGTGGTACTGTCCGGCAGACAAACAATCCAAACAAAAAAGATAAATCTGTGATAAAAAAGGATGCTTTCACTCAGACAGACGAACAGAATGACTTTGACTTTGAATCGTGTTCGTACAACCCAGATCAGTCAGTTTCTGAATATATGGGTTGCAACAAGAATGAACAAAGTAGTCGAGTTCCTAATCGAGAAATGTACAGCGAGGAAGCGTTAAATTTACTTTCCCAACAGAGTTTTTATTCTGAAGAAGCACAAAATGATCTCTCTTTGAATGACAACTCCATCCACTGCTATTCCACTCAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGGCATAGACGAATGGGTT AA ]
[+] EMBL CD116988 [CATGCGACTAAAAAGTTCAAACACAGTGAATCCAATGAGGAATCGAATGAAAATCATGACAAGCGCAAACAAGTTGACGCACATGTTCAAGCTTTCCTCAAGGCTGTGCTTGACCATGCCCATGGTGGTACTGTCCGGCAGACAAACAATCCAAACAAAAAAGATAAATCTGTGATAAAAAAGGATGCTTTCACTCAGACAGACGAACAGAATGACTTTGACTTTGAATCGTGTTCGTACAACCCAGATCAGTCAGTTTCTGAATATATGGGTTGCAACAAGAATGAACAAAGTAGTCGAGTTCCTAATCGAGAAATGTACAGCGAGGAAGCGTTAAATTTACTTTCCCAACAGAGTTTTTATTCTGAAGAAGCACAAAATGATCTCTCTTTGAATGACAACTCCATCCACTGCTATTCCACTCAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGT ]
[+] EMBL CD098510 [ CAATCCAAACAAAAAAGATAAATCTGTGATAAAAAAGGATGCTTTCACTCAGACAGACGAACAGAATGACTTTGACTTTGAATCGTGTTCGTACAACCCAGATCAGTCAGTTTCTGAATATATGGGTTGCAACAAAAATGAACAAAGTAGTCGAGTTCCTAATCGAGAAATGTACAGCGAGGAAGCGTTAAATTTACTTTCCCAACAGAGTTTTTATTCTGAAGAAGCACAAAATGATCTCTCTTTGAATGACAACTCCATCCACTGCTATTCCACTCAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTT AAAAAATATGAAGACTGG TTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCC ]
[+] EMBL CD117407 [ AGACGAACAGAATGACTTTGACTTTGAATCGTGTTCGTACAACCCAGATCAGTCAGTTTCTGAATATATGGGTTGCAACAAAAATGAACGAAGTAGTCGAGTTCCTAATCGAGAAATGTACAGCGAGGAAGCGTTAAATTTACTTCCCCAACAGAGTTTTTATTCTGAAGAAGCACAAAATGATCTCTCTTTGAATGACAACTCCATCCACTGCTATTCCACTCAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTT AAAAAATATGAAGACTGGTTTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACA ]
[-] EMBL CD117279 [ AGTCGAGTTCCTAATCGAGAAATGTACAGCGAGGAAGCGTTAAATTTACTTTCCCAACAGAGTTTTTATTCTGAAGAAGCACAAAATGATCTCTCTTTGAATGACAACTCCATCCACTGCTATTCCACTCAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTT AAAAAATATGAAGACTGGTTTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTATCGCTGTATCAAAATCACACATTTATCCCTACCACCATTAA ]
[-] EMBL CD095376 [ GTTCCTAATCGAGAAATGTACAGCGAGGAAGCGTTAAATTTACTTTCCCAACAGAGTTTTTATTCTGAAGAAGCACAAAATGATCTCTCTTTGAATGACAACTCCATCCACTGCTATTCCACTCAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTT AAAAAATATGAAGACTGG TTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTG ]
[-] EMBL CD117175 [ TGTACAGCGAGGAAGCGTTAAATTTACTTTCCCAACAGAGTTTTTATTCTGAAGAAGCACAAAATGATCTCTCTTTGAATGACAACTCCATCCACTGCTATTCCACTCAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTT AAAAAATATGAAGACTGGTTTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTATCGCTGTATCAAAATCACACATTTATCCCTACCACCATTAA ]
[-] EMBL CD117583 [ CAGAGTTTTTA TCAGAAGAAGCACAAAATGATCTCTCTTTGAATGACAACTCCATCCACTGCTATTCCACTCAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTT AAAAAATATGAAGACTGG TTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTATCGCTGTATCCAAATCACACATTTATCCCTACCACCATTAA ]
[-] EMBL CD117246 [ CAAGGTGAAACTGGTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTT AAAAAATATGAAGACTGGTTTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTATCGCTGTATCAAAATCACACATTTATCCCTACCACCATTAA ]
[-] EMBL CD178852 [ GTCTCTTAAATCATGGTGTTAGTAACAAGGGTACCCGCATTTCTTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTT AAAAAATATGAAGACTGG TTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTATCGCTGTATCCAAATCAC ]
[-] EMBL CD114525 [ TTCCAATAAGATCAAGAGGGCAATAGACGAATGGGTTAAAAAAATATGAAGACTGG TTTTTTCAAAACTTTGGAATGGATGTACGAACGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTATCGCTGTATCCAAATCACAC ]
[-] EMBL CD095065 [ AATATAAAGACTGG TTTTTTCAAAACTTTGAAAGGAATGTACGAGCGGCGTCCCATTCAATTGAATCAAAACCTGAAACTGAACTCAAACAAAGTTCAGAATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTG ]
[+] EMBL CD166808 [ CAAAGTTCAGAGTCAAGTTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTGTCGCTGTATCCAAATCACACATTTATCCCTACCACCATTAATACAACCATGCCTAATGC ]
[-] EMBL CD094738 [ AATCAA TTATTGGTGCTCAAACATTGTTCAACACCAATTCATCCGATTCTCAAATGCTAAATCCCTGCGGTGTATCACACGCGCCTGTTAGTTATTTCATCCCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTG ]
[-] EMBL CD095262 [ TAAATCCTTGCGTTGTATCACACGCGCCTGTTAGTTATTTCATCTCAGAGGGTTCGTTGTGCACAATCGATGGTAGATTTTCACCATACTACTCCCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCCCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTATCGCTGTATCCAAATCACACATTTATCCCTACCACCATTAATACAACCATGCCTAATGCAGTCGTTTCATACTCATCTAATTTCGCCAACCAGCTAGGTGCTTCTACAGTGTCATTTCCACCAAACGTAACCAGTACCACTACAACGTGCAATACAACGAGCTTTCACGTAGGCACATCATTTCCTATACCTCCGACTATTCAACAAAATCATTCCAT ]
[-] EMBL CD090333 [ CCTCGTCCCTTCATTTTACCTTTCCCCAACTCTAAACAACGCTCNCCTTGGTTTACACTCTAATATGACAGCTTTCAACTTCGGTGTTGGTGTATCGCTGTATCCAAATCACACATTTATCCCTACCACCATTAATACAACCATGCCTAATGCAGTCGTTTCATACTCATCTAATTTCGCCAACCCGCTAGGCGCTTATGCAGAGTCATT ]
[-] EMBL CD186025 [ GTGTCATTTCCACCAAACGTAACCAGTACCACTACAACGTGCAATACAACGAGCTTTCACGTAGGCACATCATTTCCTATACCTCCGACTATTCAACAAAATCATTCCATCACTTCCTTCGCAGATCTACCCAGTGAGTTACAAACATCTGCAATGCTTGCCAC]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||