cluster # 10524

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Schistosoma mansoni
cluster # 10524 cluster # 10524 Sequences # 17 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10524#0 length = 1319 sequences # 10

consensus_10524#1 length = 727 sequences # 6
consensus_10524#2 length = 257 sequences # 1

consensusID : consensus_10524#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1319
fasta sequence

                              [CTGGTGGGCAAATCGAATTAGATTCACGCCGGCCTTGAAGGTGTGGGCGCTTATTTAACCCCCAGACCAATGTCTAAGAAGAAAGGCGATGTGCCAAAGAAAACTGTTTTGCTTGGGAGAATCGGTACTAATCTGAAATGTGGTGTTGTAGGCCTCCCAAACGTTGGGAAATCTACATTCTTCAATATTCTCACTAAAAGTCAAGTCCCCGCCGAAAATTTTCCATTTTGCACTATTAATCCTAATGAAAGTCGTGTTGCAGTGCCAGATGAAAGATTCGATTGGCTTTGTGAATATCACCAACCTGTTAGCCGAGTACCAGCTTACTTAAATGTTGTCGACATCGCTGGTCTAGTTAAAGGTGCACATGAAGGACAAGGTTTGGGAAATGCATTTCTTTCTCATATCCGTGGTGTTGATGCAATTTTCCACATGTTAAGATTGTTTGAAAATGAAGACATCACTCATATTGAAGGTGATATTGATCCTGTACGTGATTTAGATATCATTGATGAAGAGTTACGTCTTAAAGACATTGAATATGTCACTAAAGAATGGGAGAAATGTGAAAAAGTAGTTATTCGAGGCAATGATAAAAAACAAATGCCTGCTTATGAATGTCTTACAAAAGTTAAAAATATGTTAATCAATGATAAACGAAATGTTC-GTTTTGGTGATTGGAATCCAACTGAGGTGGAGATTCTTAACGAGCATTTATTTATCACATCGAAACCTGTGATTTATTTGGTTAATATGTCAGAGAAGGCGTTTTTAAAGAAGAAAAGTAAATGGCTACCAAAAATTAAGGAATGGGTTGATGAGCATGATTCTGGTGCAGCAATTATTCCTTTCTCTGCTGATCTTGAACAAAAACTCAGTGAAATGTCACCAGAAGAAGCTACGGCTTATATGAAAGAAAATGAATTCACTACCATGTTGCCAAAAATTATTCGT-GTCGGTTATCAAACATTACAGTTACACTACTTCTTCACATGTGGTAAAGATGAAGTCAAGGCGTGGACTATACAGAAAGGCTCAAAAGCTCCTCAAGCTGCTGGCCGAATTCATACGGATATGGAAAAAGGTTTCATCATGGCTGAAGTGATGTCATATGAAGATTTCAAAACAGAAGGTTCTGAGGCTGCTGTCAAAGCTGCTGGCAAATACAAACAAAAGGGACGAGAATATGTTGTTGAAGATGGGGATATTATATT-GTTTAAGTTC-AATGCTGGTGCCGGTCTTCAAGCGAAGAAAAAATGATATTTGCTATGCCATATAGGTCTAATTTATTTTCAGTGACTTTTTAAAATAAAAC--GATA]

[+] EMBL CD122497             [CTGGTGGGCAAATCGAATTAGATTCACGCCGGCCTTGAAGGTGTGGGCGCTTATTTAACCCCCAGACCAATGTCTAAGAAGAAAGGCGATGTGCCAAAGAAAACTGTTTTGCTTGGGAAAATCGGTACTAATCTGAAATGTGGTGTTGTAGGCCTCCCAAACGTTGGGAAATCTACATTCTTCAATATTCTCACTAAAAGTCAAGTCCCCGCCGAAAATTTTCCATTTTGCACTATTAATCCTAATGAAAGTCGTGTTGCAGTGCCAGATGAAAGATTCGATTGGCTTTGTGAATATCACCAACCTGTTAGCCGAGTACCAGCTTACTTAAATGTTGTCGACATCGCTGGTCTAGTTAAAGGTGCACATGAAGGACAAGGTTTGGGAAATGCATTTCTTTCTCATATCCGTGGTGTTGATGCAATTTTCCACATGTTAAGATTGTTTGAAAATGAAGACATCACCCATATTGAAGGTGATATTGATCCTGTACGTGATTTAGATATCATTGATGAAGAGTTACGTCTTANAGACATTGAATATGTCACTAAAGAATGGGAGAAATGTGAAAAAGTAGTTATTCGAGGCAATGANTAAAAACAAATGCCTGCTTATGAATGTCTTACANAAGTTAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD113432             [ TGGTGGGCAAATCGAATTAGATTCACGCCGGCCTTGAAGGTGTGGGCGCTTATTTAACCTCCAGACCAATGTCTAAGAAGAAAGGCGATGTGCCAAAGAAAACTGTTTTGCTTGGGAGAATCGGTACTAATCTGAAATGTGGTGTTGTAGGCCTCCCAAACGTTGGGAAATCTACATTCTTCAATATTCTCACTAAAAGTCAAGTCCCCGCCGAAAATTTTCCATTTTGCACTATTAATCCTAATGAAAGTCGTGTTGCAGTGCCAGATGAAAGATTCGATTGGCTTTGTGAATATCACCAACCTGTTAGCCGAGTACCAGCTTACTTAAATGTTGTCGACATCGCTGGTCTAGTTAAAGGTGCACATGAAGGACAAGGTTTGGGAAATGCATTTCTTTCTCATATCCGTGGTGTTGATGCAATTTTCCACATGTTAAGATTGTTTGAAAATGAAGACATCACTCATATTGAAGGTGATATTGATCCTGTACGTGATTTAGATATCATTGATGAAGAGTTACGTCTTAAAGACATTGAATATGTCACTAAAGAATGGGAGAAATGTGAAAAAGTAGTTATTCGAAGCAATGATAAAAAACAAGTGCCTGCTTATGAATGTCTTACAAAAGTTAAAAATATGTTNATCAATGATAAACGAAATGTTCGGTTTTGGTGATTGGAATCCAACTGAGGTGGAAATCCTTAACGAGCATTTATTTATCACATCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AI975890             [                                         TGTGGGCGCTTATTTAACCCCCAGACCAATGTCTAAGAAGAAAGGCGATGTGCCAAAGAAAACTGTTTTGCTTGGGAGAATCGGTACTAATCTGAAATGTGGTGTTGTAGGCCTCCCAAACGTTGGGAAATCTACATTCTTCAATATTCTCACTAAAAGTCAAGTCCCCGCCGAAAATTTTCCATTTTGCACTATTAATCCTAATGAAAGTCGTGTTGCAGTGCCAGATGAAAGATTCGATTGGCTTTGTGAATATCACCAACCTGTTAGCCGAGTACCAGCTTACTTAAATGTTGTCGACATCGCTGGTCTAGTTAAAGGTGCACATGAAGGACAAGGTTTGGGAAATGCATTTCTTTCTCATATCCGTGGTGTTGATGCAATTTTCCACATGTTAAGATTGTTTGAAAATGAAGACATCACTCATATTGAAGGTGATATTGATCCTGTACGTGATTTAGATATCATTGATGAAGAGTTACGTCTTAAAGACATTGAATATGTCACTAAAGAATGGGAGAAATGTGAAAAAGTAGTTATTCGAGGCAATGATAAAAAACAAATGCCTGCTTATGAATGTCTTACAAAAGTTAANAATATGTTAATCAATGATAAACGAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD196076             [                                                                                      gattctcCCAAAGAAAACTGTTTTGCTTGGGAGAATCGGTACTAATCTGAAATGTGGTGTTGTAGGCCTCCCAAACGTTGGGAAATCTACATTCTTCAATATTCTCACTAAAAGTCAAGTCCCCGCCGAAAATTTTCCATTTTGCACTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD116015             [                                                                                                                                                                                                                                                                                                                                                                 AGTTAAAGGTGCACGTGAAGGACAAGGTTTGGGAAATGCATTTCTTTCTCATATCCGTGGTGTTGATGCAATTTTCCACATGTTAAGATTGTTTGAAAATGAAGACATCACTCATATTGAAGGTGATATTGATCCTGTACGTGATTTAGATATCATCGATGAAGAGTTACGTCTTAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD156818             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TATGTCACTAAAGAATGGGAGAAATGTGAAAAAGTAGTTATTCGAGGCAATGATAAAAAACAAATGCCTGCTTATGAATGTCTTACAAAAGTTAAAAATATGTTAATCAATGATAAACGAAATGTTC GTTTTGGTGATTGGAATCCAACTGAGGTGGAGATTCTTAACGAGCATTTATTTATCACATCGAAACCTGTGATTTATTTGGTTAATATGTCAGAGAAGGCGTTTTTAAAGAAGAAAAGTAAATGGCTACCAAAAATTAAGGAATGGGTTGATGAGCATGATTCTGGTGCAGCAATTATTCCTTTCTCTGCTGATCTTGAACAAAAACTCAGTGAAATGTCACCAGAAGAAGCTACGGCTTATATGAAAGAAAATGAATTCACTACCATGTTGCCAAA                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BF936899             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGAGGCAATGAT AAAAACAAATGCCTGCTTATGAATGTCTTACAAAAGTTAAAAATATGTTAATCAATGATAAACGAAATGTTC GTTTTGGTGATTGGAATCCAACTGAGGTGGAGATTCTTAACGAGCATTTATTTATCACATCGAAACCTGTGATTTATTTGGTTAATATGTCAGAGAAGGCGTTTTTAAAGAAGAAAAGTAAATGGCTACCAAAAATTAAGGAATGGGTTGATGAGCATGATTCTGGTGCAGCAATTATTCCTTTCTCTGCTGATCTTGAACAAAAACTCAGTGAAATGTCACCAGAAGAAGCTACGGCTTATATGAAAGAAAATGAATTCACTACCATGTTGCCAAAAATTATTCGTGGTCGGTTATCAAACATTACAGTTACACTACTTCTTCACATGTGGTAAAGATGAAGTCAAGGCGTGGACTATACAGAAAGGCTCAAAAGCTCCTCAAGCTGCTGGCCGAATTCATACGGATATGGAAAAAGGTTTCATCATGGCTGAAGTGATGTCATATGAAGATTTC AAACAGAAGGTTCTGAGGCTGCTGTCAAAGCTGCTGGCAAATACAAACAAAAGGGACGAGAATATGTTGTTGAAGATGGGGATATTATATTGGTTTAAGTTCAAATGCT GTGCCcg                                                                                   ]
[-] EMBL AI975066             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GAAAATGAATTCACTACCATGTTGCCAAAAATTATTCGT GTCGGTTATCAAACATTACAGTTACACTACTTCTTCACATGTGGTAAAGATGAAGTCAAGGCGTGGACTATACAGAAAGGCTCAAAAGCTCCTCAAGCTGCTGGCCGAATTCATACGGATATGGAAAAAGGTTTCATCATGGCTGAAGTGATGTCATATGAAGATTTCAAAACAGAAGGTTCTGAGGCTGCTGTCAAAGCTGCTGGCAAATACAAACAAAAGGGACGAGAATATGTTGTTGAAGATGGGGATATTATATT GTTTAAGTTC AATGCTGGTGCCGGTCTTCAAGCGAAGAAAAAATGATATTTGCTATGCCATATAGGTCTAATTTATTTTCAGTGACTTTTTAAAATAAAAC      ]
[-] EMBL CD074525             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTCACATGTGGTAAAGATGAAGTCAAGGCGTGGGCTATACAGAAAGGCTCAAAAGCTCCTCCAGCTGCTGGCCGAATTCATTCGGATATGGAAAAAGGTTTCATCATGGCTGAAGTGATGTCATATGAAGATTTCCAAACAGAAGGTTTTGAGGCTGCTGTCAAAACTGCTGGCCAATACCAACCAAAGGGGCGAGAATATGTTGTTGAAGATGGGGATATTATATT GTTTAAGTTC AAAGCTGGGGCCGGTTTTCCAACGAAAAAAAAATGATATTTGCTATGCCCTATAGGTTTAATTTATTTTCAGTGACTTTTTAAAATAAAACTTGATA]
[+] EMBL CD145849             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATACAGAAAGGCTCAAAAGCTCCTCAAGCTGCTGGCCGAACTCATACGCATATGGAAAAAGGTTTCATCATGGCTGAAGTGATGTCATATGAAGATTTCAAAACAGAAGGTTCTGAGGCTGCTGTCAAAGCTGCTGGCAAATACAAACAAAAGGGACGAGAATATGTTGTTGAAGATGGCGATATTATACT GTTTACGTTC AATGCTGGTGCCGGTCTTCAAGCGAAGAAAAAATGATATTTGCTATGCCATATCGGTCTAATTTATTTTCAGTGACTTTT                 ]




>consensus_10524#0
CTGGTGGGCAAATCGAATTAGATTCACGCCGGCCTTGAAGGTGTGGGCGCTTATTTAACC
CCCAGACCAATGTCTAAGAAGAAAGGCGATGTGCCAAAGAAAACTGTTTTGCTTGGGAGA
ATCGGTACTAATCTGAAATGTGGTGTTGTAGGCCTCCCAAACGTTGGGAAATCTACATTC
TTCAATATTCTCACTAAAAGTCAAGTCCCCGCCGAAAATTTTCCATTTTGCACTATTAAT
CCTAATGAAAGTCGTGTTGCAGTGCCAGATGAAAGATTCGATTGGCTTTGTGAATATCAC
CAACCTGTTAGCCGAGTACCAGCTTACTTAAATGTTGTCGACATCGCTGGTCTAGTTAAA
GGTGCACATGAAGGACAAGGTTTGGGAAATGCATTTCTTTCTCATATCCGTGGTGTTGAT
GCAATTTTCCACATGTTAAGATTGTTTGAAAATGAAGACATCACTCATATTGAAGGTGAT
ATTGATCCTGTACGTGATTTAGATATCATTGATGAAGAGTTACGTCTTAAAGACATTGAA
TATGTCACTAAAGAATGGGAGAAATGTGAAAAAGTAGTTATTCGAGGCAATGATAAAAAA
CAAATGCCTGCTTATGAATGTCTTACAAAAGTTAAAAATATGTTAATCAATGATAAACGA
AATGTTCGTTTTGGTGATTGGAATCCAACTGAGGTGGAGATTCTTAACGAGCATTTATTT
ATCACATCGAAACCTGTGATTTATTTGGTTAATATGTCAGAGAAGGCGTTTTTAAAGAAG
AAAAGTAAATGGCTACCAAAAATTAAGGAATGGGTTGATGAGCATGATTCTGGTGCAGCA
ATTATTCCTTTCTCTGCTGATCTTGAACAAAAACTCAGTGAAATGTCACCAGAAGAAGCT
ACGGCTTATATGAAAGAAAATGAATTCACTACCATGTTGCCAAAAATTATTCGTGTCGGT
TATCAAACATTACAGTTACACTACTTCTTCACATGTGGTAAAGATGAAGTCAAGGCGTGG
ACTATACAGAAAGGCTCAAAAGCTCCTCAAGCTGCTGGCCGAATTCATACGGATATGGAA
AAAGGTTTCATCATGGCTGAAGTGATGTCATATGAAGATTTCAAAACAGAAGGTTCTGAG
GCTGCTGTCAAAGCTGCTGGCAAATACAAACAAAAGGGACGAGAATATGTTGTTGAAGAT
GGGGATATTATATTGTTTAAGTTCAATGCTGGTGCCGGTCTTCAAGCGAAGAAAAAATGA
TATTTGCTATGCCATATAGGTCTAATTTATTTTCAGTGACTTTTTAAAATAAAACGATA

consensusID : consensus_10524#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 727
fasta sequence

                              [AGGGATAAAAACAAATGCCTGCTTATGAATGTCTTACAAAAGTTAAAAATATGTTAATCAATGATAAACGAAATGTTCGTTTTGGTGATTGGAATCCAACTGAGGTGGAGATTCTTAACGAGCATTTATTTATCACATCGAAACCTGTGATTTATTTGGTTAATATGTCAGAGAAGGCGTTTTTAAAGAAGAAAAGTAAATGGCTACCAAAAATTAAGGAATGGGTTGATGAGCATGATTCTGGTGCAGCAATTATTCCTTTCTCTGCTGATCTTGAACAAAAACTCAGTGAAATGTCACCAGAAGAAGCTACGGCTTATATGAAAGAAAATGAATTCACTACCATGTTGCCAAAAATTATTCGTGTCGGTTATCAAACATTACAGTTACACTACTTCTTCACATGTGGTAAAGATGAAGTCAAGGCGTGGACTATACAGAAAGGCTCAAAAGCTCCTCAAGCTGCTGGCCGAATTCATACGGATATGGAAAAAGGTTTCATCATGGCTGAAGTGATGTCATATGAAGATTTCAAAACAGAAGGTTCTGAGGCTGCTGTCAAAGCTGCTGGCAAATACAAACAAAAGGGACGAGAATATGTTGTTGAAGATGGNGATATTATATTGTTTAAGTTCAATGCTGGTGCCGGTCTTCAGCGAAGAAAAATGATATTTGCTATGCCATATAGGTCTAATTTATTTTCAGTGACTTTTTAAATANACTTGAT]

[+] EMBL CD080433             [AGGGATAAAAACAAATGCCTGCTTATGAATGTCTTACAAAAGTTAAAAATATGTTAATCAATGATAAACGAAATGTTCGTTTTGGTGATTGGAATCCAACTGAGGTGGAGATTCTTAACGAGCATTTATTTATCACATCGAAACCTGTGATTTATTTGGTTAATATGTCAGAGAAGGCGTTTTTAAAGAAGAAAAGTAAATGGCTACCAAAAATTAAGGAATGGGTTGATGAGCATGATTCTGGTGCAGCAATTATTCCTTTCTCTGCTGATCTTGAACAAAAACTCAGTGAAATGTCACCAGAAGAAGCTACGGCTTATATGAAAGAAAATGAATTCACTACCATGTTGCCAAAAATTATTCGTGTCGGTTATCAAACATTACAGTTACACTACTTCTTCACATGTGGTAAAGATGAAGTCAAGGCGTGGACTATACAGAAAGGCTCAAAAGCTCCTCAAGCTGCTGGCCGAATTCATACGGATATGGAAAAAGGTTTCATCATGGCTGAAGTGATGTCATATGAAGATTTCAAAACAGAAGGTTCTGAGGCTGCTGTCAAAGCTGCTGGCAAATACAAACAAAAGGGACGAGAATATGTTGTTGAAGATGGNGATATTATATTGTTTAAGTTCAATGCTGGTGCCGGTCTTCAGCGAAGAAAAATGATATTTGCTATGCCATATAGGTCTAATTTATTTTCAGTGACTTTTTAAATANACTTGAT]
[+] EMBL CD159377             [                                                                       AATGTTCGTTTTGGTGATTGGAATCCAACTGAGGCGGAGATTCTTAACGAGCATTTATTTATCACATCGAAACCTGTGATTTATTTGGTTAATATGTCAGAGAAGGCGTTTTTAAAGAAGAAAAGTAAATGGCTACCAAAAATTAAGGAATGGGTTGATGAGCATGATTTTGGTGCAGCAATTATTCCTTTCTCTGCTGATCTTGAACAAAAACTCAGTGAAATGTCACCAGAAGAAGCTACGGCTTATATGAAAGAAAATGAATTCACTACCATGTTGCCAAAAATTATTCGTGTCGGTTATCAAACATTACAGTTACACTACTTCTTCACATGTGGTAAAGATGAAGTCAAGGCGTGGACTATACAGAAAGGCTC                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD114066             [                                                                                                                             TTATTTATCACATCGAAACCTGTGATTTATTTGGTTAATATGTCAGAGAAGGCGTTTTTAAAGAAGAAAAGTAAATGGCTACCAAAAATTAAGGAATGGGTTGATGAGCATGATTCTGGTGCAGCAATTATTCCTTTCTCTGCTGATCTTGAACAAAAACTCAGTGAAATGTCACCAGAAGAAGCTACGGCTTATATGAAAGAAAATGAATTCACTACCATGTTGCCAAAAATTATTCGTGTCGGTTATCAAACATTACAGTTACACTACTTCTTCACATGTGGTAAAGATGAAGTCAAGGCGTGGACTATACAGAAAGGCTCAAAAGCTCCTCAAGCTGCTGGCCGAATTCATACGGATATGGAAAAAGGTTTCATCATGGCTGAAGTGATGTCATATGAAG                                                                                                                                                                                                       ]
[+] EMBL CD158765             [                                                                                                                                                                                  GTTTTTAAAGAAGAAAAGTAAATGGCTACCAAAAATTAAGGAATGGGTTGATGAGCATGATTCTGGTGCAGCAATTATTCCTTTCTCTGCTGATCTTGAACAAAAACTCAGTGAAATGTCACCAGAAGAAGCTACGGCTTATATGAAAGAAAATGAATTCACTACCATGTTGCCAAAAATTATTCGTGTCGGTTATCAAACATTGCAGTTACACTACTTCTTCACATGTGGTAAAGATGAAGTCAAGGCGTGGACTATACAGA                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD120224             [                                                                                                                                                                                                                                                                                                         CACCAGAAGAAGCTACGGCTTATATGAAAGAAAATGAATTCACTACCATGTTGCCAAAAATTATTCGTGTCGGTTATCAAACATTACAGTTACACTACTTCTTCACATGTGGTAAAGATGAAGTCAAGGCGTGGACTATACAGAAAGGCTCAAAAGCTCCTCAAGCTGCTGGCCGAATTCATACGGATATGGAAAAAGGTTTCATCATGGCTGA                                                                                                                                                                                                                        ]
[-] EMBL CD120268             [                                                                                                                                                                                                                                                                                                          ACCAGAAGAAGCTACGGCTTATATGAAAGAAAATGAATTCACTACCATGTTGCCAAAAATTATTCGTGTCGGTTATCAAACATTACAGTTACACTACTTCTTCACATGTGGTAAAGATGAAGTCAAGGCGTGGACTATACAGAAAGGCTCAAAAGCTCCTCAAGCTGCTGGCCGAATTCATACGGATATGGAGAAAGGTTTCATCATGGCTGAA                                                                                                                                                                                                                       ]




>consensus_10524#1
AGGGATAAAAACAAATGCCTGCTTATGAATGTCTTACAAAAGTTAAAAATATGTTAATCA
ATGATAAACGAAATGTTCGTTTTGGTGATTGGAATCCAACTGAGGTGGAGATTCTTAACG
AGCATTTATTTATCACATCGAAACCTGTGATTTATTTGGTTAATATGTCAGAGAAGGCGT
TTTTAAAGAAGAAAAGTAAATGGCTACCAAAAATTAAGGAATGGGTTGATGAGCATGATT
CTGGTGCAGCAATTATTCCTTTCTCTGCTGATCTTGAACAAAAACTCAGTGAAATGTCAC
CAGAAGAAGCTACGGCTTATATGAAAGAAAATGAATTCACTACCATGTTGCCAAAAATTA
TTCGTGTCGGTTATCAAACATTACAGTTACACTACTTCTTCACATGTGGTAAAGATGAAG
TCAAGGCGTGGACTATACAGAAAGGCTCAAAAGCTCCTCAAGCTGCTGGCCGAATTCATA
CGGATATGGAAAAAGGTTTCATCATGGCTGAAGTGATGTCATATGAAGATTTCAAAACAG
AAGGTTCTGAGGCTGCTGTCAAAGCTGCTGGCAAATACAAACAAAAGGGACGAGAATATG
TTGTTGAAGATGGNGATATTATATTGTTTAAGTTCAATGCTGGTGCCGGTCTTCAGCGAA
GAAAAATGATATTTGCTATGCCATATAGGTCTAATTTATTTTCAGTGACTTTTTAAATAN
ACTTGAT

consensusID : consensus_10524#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 257
fasta sequence

                              [TTCATTCGGATATGGAAAAAGGTTTCCTCATGGCTGAAGTGATGTCATATGAAGATTTCAAAACCAAAGGTTTTTAGGGTGCTGTCAAAACTGCTGGCCAATACCAACCAAAAGGGCGAGAATATGTTGTTTAAAATGGGGATATTATATTGTTTAAGTTCAATGCTGGGGCCGGTTTTCCAACGAAAAAAAAATGATATTTGCTATGCCCAATAGGTTTAATTTATTTTCAGTGACTTTTTTAAATAAAACTTGAT]

[-] EMBL CD074346             [TTCATTCGGATATGGAAAAAGGTTTCCTCATGGCTGAAGTGATGTCATATGAAGATTTCAAAACCAAAGGTTTTTAGGGTGCTGTCAAAACTGCTGGCCAATACCAACCAAAAGGGCGAGAATATGTTGTTTAAAATGGGGATATTATATTGTTTAAGTTCAATGCTGGGGCCGGTTTTCCAACGAAAAAAAAATGATATTTGCTATGCCCAATAGGTTTAATTTATTTTCAGTGACTTTTTTAAATAAAACTTGAT]




>consensus_10524#2
TTCATTCGGATATGGAAAAAGGTTTCCTCATGGCTGAAGTGATGTCATATGAAGATTTCA
AAACCAAAGGTTTTTAGGGTGCTGTCAAAACTGCTGGCCAATACCAACCAAAAGGGCGAG
AATATGTTGTTTAAAATGGGGATATTATATTGTTTAAGTTCAATGCTGGGGCCGGTTTTC
CAACGAAAAAAAAATGATATTTGCTATGCCCAATAGGTTTAATTTATTTTCAGTGACTTT
TTTAAATAAAACTTGAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10524#0      CTGGTGGGCAAATCGAATTAGATTCACGCCGGCCTTGAAGGTGTGGGCGCTTATTTAACC 60
consensus_10524#1      ------------------------------------------------------------
consensus_10524#2      ------------------------------------------------------------
                                                                                   

consensus_10524#0      CCCAGACCAATGTCTAAGAAGAAAGGCGATGTGCCAAAGAAAACTGTTTTGCTTGGGAGA 120
consensus_10524#1      ------------------------------------------------------------
consensus_10524#2      ------------------------------------------------------------
                                                                                   

consensus_10524#0      ATCGGTACTAATCTGAAATGTGGTGTTGTAGGCCTCCCAAACGTTGGGAAATCTACATTC 180
consensus_10524#1      ------------------------------------------------------------
consensus_10524#2      ------------------------------------------------------------
                                                                                   

consensus_10524#0      TTCAATATTCTCACTAAAAGTCAAGTCCCCGCCGAAAATTTTCCATTTTGCACTATTAAT 240
consensus_10524#1      ------------------------------------------------------------
consensus_10524#2      ------------------------------------------------------------
                                                                                   

consensus_10524#0      CCTAATGAAAGTCGTGTTGCAGTGCCAGATGAAAGATTCGATTGGCTTTGTGAATATCAC 300
consensus_10524#1      ------------------------------------------------------------
consensus_10524#2      ------------------------------------------------------------
                                                                                   

consensus_10524#0      CAACCTGTTAGCCGAGTACCAGCTTACTTAAATGTTGTCGACATCGCTGGTCTAGTTAAA 360
consensus_10524#1      ------------------------------------------------------------
consensus_10524#2      ------------------------------------------------------------
                                                                                   

consensus_10524#0      GGTGCACATGAAGGACAAGGTTTGGGAAATGCATTTCTTTCTCATATCCGTGGTGTTGAT 420
consensus_10524#1      ------------------------------------------------------------
consensus_10524#2      ------------------------------------------------------------
                                                                                   

consensus_10524#0      GCAATTTTCCACATGTTAAGATTGTTTGAAAATGAAGACATCACTCATATTGAAGGTGAT 480
consensus_10524#1      ------------------------------------------------------------
consensus_10524#2      ------------------------------------------------------------
                                                                                   

consensus_10524#0      ATTGATCCTGTACGTGATTTAGATATCATTGATGAAGAGTTACGTCTTAAAGACATTGAA 540
consensus_10524#1      ------------------------------------------------------------
consensus_10524#2      ------------------------------------------------------------
                                                                                   

consensus_10524#0      TATGTCACTAAAGAATGGGAGAAATGTGAAAAAGTAGTTATTCGAGGCAATGATAAAAAA 600
consensus_10524#1      ------------------------------------------------AGGGATAAAAA- 11
consensus_10524#2      ------------------------------------------------------------
                                                                                   

consensus_10524#0      CAAATGCCTGCTTATGAATGTCTTACAAAAGTTAAAAATATGTTAATCAATGATAAACGA 660
consensus_10524#1      CAAATGCCTGCTTATGAATGTCTTACAAAAGTTAAAAATATGTTAATCAATGATAAACGA 71
consensus_10524#2      ------------------------------------------------------------
                                                                                   

consensus_10524#0      AATGTTCGTTTTGGTGATTGGAATCCAACTGAGGTGGAGATTCTTAACGAGCATTTATTT 720
consensus_10524#1      AATGTTCGTTTTGGTGATTGGAATCCAACTGAGGTGGAGATTCTTAACGAGCATTTATTT 131
consensus_10524#2      ------------------------------------------------------------
                                                                                   

consensus_10524#0      ATCACATCGAAACCTGTGATTTATTTGGTTAATATGTCAGAGAAGGCGTTTTTAAAGAAG 780
consensus_10524#1      ATCACATCGAAACCTGTGATTTATTTGGTTAATATGTCAGAGAAGGCGTTTTTAAAGAAG 191
consensus_10524#2      ------------------------------------------------------------
                                                                                   

consensus_10524#0      AAAAGTAAATGGCTACCAAAAATTAAGGAATGGGTTGATGAGCATGATTCTGGTGCAGCA 840
consensus_10524#1      AAAAGTAAATGGCTACCAAAAATTAAGGAATGGGTTGATGAGCATGATTCTGGTGCAGCA 251
consensus_10524#2      ------------------------------------------------------------
                                                                                   

consensus_10524#0      ATTATTCCTTTCTCTGCTGATCTTGAACAAAAACTCAGTGAAATGTCACCAGAAGAAGCT 900
consensus_10524#1      ATTATTCCTTTCTCTGCTGATCTTGAACAAAAACTCAGTGAAATGTCACCAGAAGAAGCT 311
consensus_10524#2      ------------------------------------------------------------
                                                                                   

consensus_10524#0      ACGGCTTATATGAAAGAAAATGAATTCACTACCATGTTGCCAAAAATTATTCGTGTCGGT 960
consensus_10524#1      ACGGCTTATATGAAAGAAAATGAATTCACTACCATGTTGCCAAAAATTATTCGTGTCGGT 371
consensus_10524#2      ------------------------------------------------------------
                                                                                   

consensus_10524#0      TATCAAACATTACAGTTACACTACTTCTTCACATGTGGTAAAGATGAAGTCAAGGCGTGG 1020
consensus_10524#1      TATCAAACATTACAGTTACACTACTTCTTCACATGTGGTAAAGATGAAGTCAAGGCGTGG 431
consensus_10524#2      ------------------------------------------------------------
                                                                                   

consensus_10524#0      ACTATACAGAAAGGCTCAAAAGCTCCTCAAGCTGCTGGCCGAATTCATACGGATATGGAA 1080
consensus_10524#1      ACTATACAGAAAGGCTCAAAAGCTCCTCAAGCTGCTGGCCGAATTCATACGGATATGGAA 491
consensus_10524#2      -------------------------------------------TTCATTCGGATATGGAA 17
                                                                  ***** ***********

consensus_10524#0      AAAGGTTTCATCATGGCTGAAGTGATGTCATATGAAGATTTCAAAACAGAAGGTTCTGAG 1140
consensus_10524#1      AAAGGTTTCATCATGGCTGAAGTGATGTCATATGAAGATTTCAAAACAGAAGGTTCTGAG 551
consensus_10524#2      AAAGGTTTCCTCATGGCTGAAGTGATGTCATATGAAGATTTCAAAACCAAAGGTTTTTAG 77
                       ********* *************************************  ****** * **

consensus_10524#0      GCTGCTGTCAAAGCTGCTGGCAAATACAAACAAAAGGGACGAGAATATGTTGTTGAAGAT 1200
consensus_10524#1      GCTGCTGTCAAAGCTGCTGGCAAATACAAACAAAAGGGACGAGAATATGTTGTTGAAGAT 611
consensus_10524#2      GGTGCTGTCAAAACTGCTGGCCAATACCAACCAAAAGGGCGAGAATATGTTGTTTAAAAT 137
                       * ********** ******** ***** *** *** ** *************** ** **

consensus_10524#0      GGGGATATTATATTGTTTAAGTTCAATGCTGGTGCCGGTCTTCAAGCGAAGAAAAAATGA 1260
consensus_10524#1      GGNGATATTATATTGTTTAAGTTCAATGCTGGTGCCGGTCTTCA-GCGAAGAAAAA-TGA 669
consensus_10524#2      GGGGATATTATATTGTTTAAGTTCAATGCTGGGGCCGGTTTTCCAACGAAAAAAAAATGA 197
                       ** ***************************** ****** ***   **** ***** ***

consensus_10524#0      TATTTGCTATGCCATATAGGTCTAATTTATTTTCAGTGACTTTTTAAAATAAAAC--GAT 1318
consensus_10524#1      TATTTGCTATGCCATATAGGTCTAATTTATTTTCAGTGACTTTTTAAATANACTT--GAT 727
consensus_10524#2      TATTTGCTATGCCCAATAGGTTTAATTTATTTTCAGTGACTTTTTTAAATAAAACTTGAT 257
                       *************  ****** *********************** **   *     ***

consensus_10524#0      A 1319
consensus_10524#1      -
consensus_10524#2      -