cluster # 10536

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Schistosoma mansoni
cluster # 10536 cluster # 10536 Sequences # 17 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10536#0 length = 1338 sequences # 16

consensus_10536#1 length = 695 sequences # 1

consensusID : consensus_10536#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 1338
fasta sequence

                              [CTTGCGGGTTTTCGAAATAACGTCTTAGTAAGTGTTCGTCCCGGCAATGTTAACTGAGTCGCAGAACTCTCATCCTAAAGAAGCAGAAAATAAATTGATTGAAAAATATCAAAGCATAGTCAGAAATGATGTCGAACCTGACGAAGCTTCTATCAAAGCTAAGGAACAAGCTATACTAGAACTTGGAAATTTACTCGCTGAAAAGAAAGATGCAAAAGGATTGGGAGATCTCATTTTAGTAACTCGACCGTTTCTCAAGCTGATCAGCAAAGCAAAAGCCGGTCGTCTTGTCAGAACTCTGGTTGATTTGTTTTTGGATCTTGAAGGAGGAACTGGTCGGGAGGTTGATCTCTGTCTTGAATGCGTTGAATGGGCCAATCAGGAAAAACGTATTTTTCTTCGTCAGGCATTAGAAGCTCGTCTCATGGGTCTTTATTATGATAATGGAAGTTATGAAGAAGCATTGAAATTAGGTTCAAATTTATTGCGTGAACTTAAAAAGCTGGATGATAAAGCTCTTTTGGTTGAGGTTCAACTCATGGAGAGTCGAGTTTATTATAGATTAGGTAATCTTCAACGGGCCCGTGCTGCGCTTACATCTGCTAGAACTACAGCAAATGGTATATATTGCCCACCACGTTTACAGGCCAACCTTGATCTACTTTCCGGAATTCTACACGCTGCTGATGAACGTGATTTCAAAACTGCATTTTCTTACTTTTATGAAGCATTCGAAGGCTTTGACTCAATTAGTTCCAAACGAGCTGTTGATGCTCTTAAATACATGTTACTGTCAAAAATTATGTTAAATAGTGCTGATGAAATCCCTGGTATTCTTACAAGTAAATTAGCTCTAAAATATACAAGCCGTGATATTGATGCTATGCGAGAAGTTGGGATTGCTGCTAAAGAACGATCATTGGGTGATTTTCTGCTGCTTCAAGAGAAGTACAAAACTGAATTATCTGGAGATCCAGTAATTAGTAGACATCTTCATTCATTCTATGATACATTATTTGGTCAAAATCTTCTCAAACTTATTGAACCATATTCTCGTGTTCAAATTGATCATATTGCGAAACTTATCAATATTCCTTTGGAAACTGTAGAAAAGAAACTTTCACAAATGATTTTGGACAATGAACACAATGGAATTCTGGATCAAGGTTCTGGCGTTCTAGTACTCAGAGAACCAGAATGTGATGGTAAAGACTATCCTTTAGCACTATCTGCAATCCAATCTCTTGGAGGTGTTGTTGATATGTTATTCCAAAAGACCCCGAAATTAAAATAACATTTTGGATTTCCTACCTAATGATTTTTTTTAAAATATAGTTC]

[-] EMBL CD114991             [CTTGCGGGTTTTCGAAATAACGTCTTAGTAAGTGTTCGTCCCGGCAATGTTAACTGAGTCGCAGAACTCTCATCCTAAAGAAGCAGAAAATAAATTGATTGAAAAATATCAAAGCATAGTCAGAAATGATGTCGAACCTGACGAAGCTTCTATCAAAGCTAAGGAACAAGCTATACTAGAACTTGGAAATTTACTCGCTGAAAAGAAAGATGCAAAAGGATTGGGAGATCTCATTTTAGTAACTCGACCGTTTCTCAAGCTGATCAGCAAAGCAAAAGCCGGTCGTCTTGTCAGAACTCTGGTTGATTTGTTTTTGGATCTTGAAGGAGGAACTGGTCGGGAGGTTGATCTCTGTCTTGAATACGTTGAATGGGCCAATCAGGAAAAACGTATTTTTCTTCGTCAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AI066979             [                             AAGTGTTCGTCCCGGCAATGTTAACTGAGTCGCAGAACTCTCATCCTAAAGAAGCAGAAAATAAATTGATTGAAAAATATCAAAGCATAGTCAGAAATGATGTCGAACCTGACGAAGCTTCTATCAAAGCTAAGGAACAAGCTATACTAGAACTTGGAAATTTACTCGCTGAAAAGAAAGATGCAAAAGGATTGGGAGATCTCATTTTAGTAACTCGACCGTTTCTCAAGCTGATCAGCANAGCAAAAGCCGGTCGTCTTGTCAGAACTCTGGTTGATTTGTTTTTGGATCTTGANGGAGGAACTGGTCGGGAGGTTGATCTCTGTNCTGAATGCGTTGAATGGGCCAATCAGGAAAAACGTATTTTTCTTCGTCAGGCATTAGAAGCTCGTCTCATGGGTCTTTATTATGATAATGGAAGTTATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AI067519             [                             AAGTGTTCGTCCCGGCAATGTTAACTGAGTCGCAGAACTCTCATCCTAAAGAAGCAGAAAATAAATTGATTGAAAAATATCAAAGCATAGTCAGAAATGATGTCGAACCTGACGAAGCTTCTATCAAAGCTAAGGAACAAGCTATACTAGAACTTGGAAATTTACTCGCTGAAAAGAAAGATGCAAAAGGATTGGGAGATCTCATTTTAGTAACTCGACCGTTTCTCAAGCTGATCAGCAAAGCAAAAGCCGGTCGTCTTGTCAGAACTCTGGTTGATTTGTTTTTGGATCTTGAAGGAGGAACTGGTCGGGAGGTTGATCTCTGTCTTGAATGCGTTGAATGGGCCAATCAGGAAAAACGTATTTTTCTTCGTCAGGCATTAGAAGCTCGTCTCATGGGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AI068141             [                             AAGTGTTCGTCCCGGCAATGTTAACTGAGTCGCAGAACTCTCATCCTAAAGAAGCAGAAAATAAATTGATTGAAAAATATCAAAGCATAGTCAGAAATGATGTCGAACCTGACGAAGCTTCTATCAAAGCTAAGGAACAAGCTATACTAGAACTTGGAAATTTACTCGCTGAAAAGAAAGATGCAAAAGGATTGGGAGATCTCATTTTAGTAACTCGACCGTTTCTCAAGCTGATCAGCAAAGCAAAAGCCGGTCGTCTTGTCAGAACTCTGGTTGATTTGTTTTTGGATCTTGAAGGAGGAACTGGTCGGGAGGTTGATCTCTGTCTTGAATGCGTTGAATGGGCCAATCAGGAAAAACGTATTTTTCTTCGTCAGGCATTAGAAGCTCGTCTCATGGGTCTTTATTATGATAATGGAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AI068341             [                             AAGTGTTCGTCCCGGCAATGTTAACTGAGTCGCAGAACTCTCATCCTAAAGAAGCAGAAAATAAATTGATTGAAAAATATCAAAGCATAGTCAGAAATGATGTCGAACCTGACGAAGCTTCTATCAAAGCTAAGGAACAAGCTATACTAGAACTTGGAAATTTACTCGCTGAAAAGAAAGATGCAAAAGGATTGGGAGATCTCATTTTAGTAACTCGACCGTTTCTCAAGCTGATCAGCAAAGCAAAAGCCGGTCGTCTTGTCAGAACTCTGGTTGATTTGTTTTTGGATCTTGAAGGAGGAACTGGTCGGGAGGTTGATCTCTGTCTTGAATGCGTTGAATGGGCCAATCAGGAAAAACGTATTTTTCTTCGTCAGGCATTAGAAGCTCGTCTCATGGGTCTTTATTATGATAATGGAAGTTATGAAGAAACATTGAAATTAGGTTCAAATTTATTGCGTGAACTTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD184358             [                                               ggcttctTGAGTCGCAGAACTCTCATCCTAAAGAAGCAGAAAATAAATTGATTGAAAAATATCAAAGCATAGTCAGAAATGATGTCGAACCTGACGAAGCTTCTATCAAAGCTAAGGAACAAGCTATACTAGAACTTGGAAATTTACTCGCTGAAAAGAAAGATGCAAAAGGATTGGGAGATCTCATTTTAGTAACTCGACCGTTTCTCAAGCTGATCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD154109             [                                                                                                                                 TGTCGAACCTGACGAAGCTTCTATCAAAGCTAAGGAACAAGCTATACTAGAACTTGGAAATTTACTCGCTGAAAAGAAAGATGCAAAAGGATTGGGAGATCTCATTTTAGTAACTCGACCGTTTCTCAAGCTGATCAGCAAAGCAAAAGCCGGTCGTCTTGTCAGAACTCTGGTTGATTTGTTTTTGGATCTTGAAGGAGGAACTGGTCGGGAGGTTGATCTCTGTCTTGAATGCGTTGAATGGGCCAATCAGGAAAAACGTATTTTTCTTCGTCAGGCATTAGAAGCTCGTCTCATGGGTCTTTATTATGATAATGGAAGTTATGAAGAAGCATTGAAATTAGGTTCAAATTTATTGCGTGAACTTAAAAAGCTGGATGATAAAGCTCTTTTGGTTGAGGTTCAACTCATGGAGAGTCGAGTTTATTATAGATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD139651             [                                                                                                                                                                                  GAACTTGGAAATTTACTCGCTGAAAGGAAAGATGCAAAAGGATTGGGAGATCTCATTTTAGTAACTCGACCGTTTCTCAAGCTGATCAGCAAAGCAAAAGCCGGTCGTCTTGTCAGAACTCTGGTTGATTTGTTTTTGGATCTTGAAGGAGGAACTGGTCGGGAGGTTGATCTCTGTCTTGAATGCGTTGAATGGGCCAATCAGGAAAAACGTATTTTTCTTCGTCAGGCATTAGAAGCTCGTCTCATGGGTCTTTATTATGATAATGGAAAGTATGAAGAAGCATTGAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD139720             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGAACTTAAAAAGCTGGATGATAAAGCTCTTTTGGTTGAGGTTCAACTCATGGAGAGTCGAGTTTATTATAGATTAGGTAATCTTCAACGGGCCCGTGCTGCGCTTACATCTGCTAGAACTACAGCAAATGGTATATATTGCCCACCACGTTTACAGGCCAACCTTGATCTACTTTCCGGAATTCTACACGCTGCTGATGAACGTGATTTCAAAACTGCATTTTCTAACTTTTATGAAGCATTCGAAGGCTTTGACTCAATTAGTTCCAAACGAGCTGTTGATGCTCTTAAATACATGTTACTGTNCAAAATTATGT  AATAGTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD117008             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAATTCTACACGCTGCTGATGAACGTGATTTCANAACTGCATTTTCTTACTTTTATGAAGCATTCGAAGGCTTTGACTCAATTAGTTCCAAACGAGCTGTTGATGCTCTTAAATACATGTTACTGTCAAAAATTATGTTAAATAGTGCTGATGAAATCCCTGGTATTCTTACAAGTAAATTAGCTCTAAAATATACAAGCCGTGATATTGATGCTATGCGAGAAGTTGGGATTGCTGCTAAAGAACGATCATTGGGTGATTTTCTGCTGCTTCAAGAGAAGTACAAAACTGAATTATCTGGAGATCCAGTAATTAGTAGACATCTTCATTCATTCTATGATACATTATTTGGTCAAAATCTTCTCAAACTTATTGAACCATATTCTCGTGTTCAAATTGATCATATTGCGAAACTTATCAATATTCCTTTGGAAACTGTAGAAAAGAAACTTTCACAAATGATTTTGGACAATGAACACAATGGAATTCTGGATCAAGGTTCTGGCGTTCTAGTACTCAGAGAACCAGAATGTGATGGTAAAGACTATCCTTTAGCACTATCTGCAATCCAATCTCTTGGAGGTGTTGTTGATATGTTATTCCAAAAGACCCCGAAATTAAAATAACATTTT                                      ]
[-] EMBL BG930527             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATTCTACACGCTGCTGATGAACGTGATTTCAAAACTGCATTTTCTTAC TTTATGAAGCATTCGAAGGCTTTGACTCAATTAGTTCCAAACGAGCTGTTGATGCTCTTAAATACATGTTACTGTCAAAAATTATGTTAAATAGTGCTGATGAAATCCCTGGTATTCTTACAAGTAAATTAGCTCTAAAATATACAAGCCGTGATATTGATGCTATGCGAGAAGTTGGGATTGCTGCTAAAGAACGATCATTGGGTGATTTTCTGCTGCTTCAAGAGAAGTACAAAACTGAATTATCTGGAGATCCAGTAATTAGTAGACATCTTCATTCATTCTATGATACATTATTTGGTCAAAATCTTCTCAAACTTATTGAACCATATTCTCGTGTTCAAATTGATCATATTGCGAAACTTATCAATATTCCTTTGGAAACTGTAGAAAAGAAACTTTCACAAATGATTTTGGACAATG                                                                                                                                                                                                    ]
[-] EMBL BG930653             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             gcgaaTACACGCTGCTGATGAACGTGATTTCAAAACTGCATTTTCTTACTTTTATGAAGCATTCGAAGGCTTTGACTCAATTAGTTCCAAACGAGCTGTTGATGCTCTTAAATACATGTTACTGTCAAAAATTATGTTAAATAGTGCTGATGAAATCCCTGGTATTCTTACAAGTAAATTAGCTCTAAAATATACAAGCCGTGATATTGATGCTATGCGAGAAGTTGGGATTGCTGCTAAAGAACGATCATTGGGTGATTTTCTGCTGCTTCAAGAGAAGTACAAAACTGAATTATCTGGAGATCCAGTAATTAGTAGACATCTTCATTCATTCTATGATACATTATTTGGTCAAAATCTTCTCAAACTTATTGAACCATATTCTCGTGTTCAAATTGATCATATTGCGAAACTTATCAATATTCCTTTGGAAACTGTAGAAAAGAAACTTTCACAAATGATTTTGGACAATG                                                                                                                                                                                                    ]
[-] EMBL BG930657             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTTTATGAAGCATTCGAAGGCTTTGACTCAATTAGTTCCAAACGAGCTGTTGATGCTCTTAAATACATGTTACTGTCAAAAATTATGTTAAATAGTGCTGATGAAATCCCTGGTATTCTTACAAGTAAATTAGCTCTAAAATATACAAGCCGTGATATTGATGCTATGCGAGAAGTTGGGATTGCTGCTAAAGAACGATCATTGGGTGATTTTCTGCTGCTTCAAGAGAAGTACAAAACTGAATTATCTGGAGATCCAGTAATTAGTAGACATCTTCATTCATTCTATGATACATTATTTGGTCAAAATCTTCTCAAACTTATTGAACCATATTCTCGTGTTCAAATTGATCATATTGCGAAACTTATCAATATTCCTTTGGAAACTGTAGAAAAGAAACTTTCACAAATGATTTTGGACAATG                                                                                                                                                                                                    ]
[-] EMBL CD074755             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTATGAAGCATTCGAAGGCTTTGACTCAATTAGTTCCAAACGAGCTGTTGATGCTCTTAAATACATGTTACTGTCAAAAATTATGTTAAATAGTGCTGATGAAATCCCTGGTATTCTTACAAGTAAATTAGCTCTAAAATATACAAGCCGTGATATTGATGCTATGCGAGAAGTTGGGATTGCTGCTAAAGAACGATCATTGGGTGATTTTCTGCTGCTTCAAGAGAAGTACAAAACTGAATTATCTGGAGATCCAGTAATTAGTAGACATCTTCATTCATTCTATGATACATTATTTGGTCAAAATCTTCTCAAACTTATTGAACCATATTCTCGTGTTCAAATTGATCATATTGCGAAACTTATCAATATTCCTTTGGAAACTGTAGAAAAGAAACTTTCACAAATGATTTTGGACAATGAACACAATGGAATTTTGGATCAAGGTTTTGGCGTTTTAGTACTCAGAGAACCAGAATGTGATGGTAAAGACTATCCTTTAGCACTATCTGCAATCCAATCTCTTGGAGGTATTGTTGATATGTTATTCCAAAAGACCACGAAATTAAAATAACATTTTGGATTTCCTACCTAATGATTTTTTTTAAAATATAGTTC]
[-] EMBL CD117053             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCCAAACGAGCTGTTGATGCTCTTAAATACATGTTACTGTCAAAAATTATGTTAAATAGTGCTGATGAAATCCCTGGTATTCTTACAAGTAAATTAGCTCTAAAATATACAAGCCGTGATATTGATGCTATGCGAGAAGTTGGGATTGCTGCTAAAGAACGATCATTGGGTGATTTTCTGCTGCTTCAAGAGAAGTACAAAACTGAATTATCTGGAGATCCAGTAATTAGTAGACATCTTCATTCATTCTATGATACATTATTTGGTCAAAATCTTCTCAAACTTATTGAACCATATTCTCGTGTTCAAATTGATCATATTGCGAAACTTATCAATATTCCTTTGGAAACTGTAGAAAAGAAACTTTCACAAATGATTTTGGACAATGAACACAATGGAATTCTGGATCAAGGTTCTGGCGTTCTAGTACTCAGAGAACCAGAATGTGATGGTAAAGACTATCCTTTAGCACTATCTGCAATCCAATCTCTTGGAGGTGTTGTTGATATGTTATTCCAAAAGACCCCGAAATTAAAATAACATTTT                                      ]
[-] EMBL CD139800             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATTATGTACAATAGTGCTGATGAAATCCCTGGTATTCTTACAAGTAAATTAGCTCTAAAATATACAAGCCGTGATATTGATGCTATGCGAGAAGTTGGGATTGCTGCTAAAGAACGATCATTGGGTGATTTTCTGCTGCTTCAAGAGAAGTACAAAACTGAATTATCTGGAGATCCAGTAATTAGTAGACATCTTCATTCATTCTATGATACATTATATGGTCAAAATCTTCTCCAACTTATTGAACCATATTCTCGTGTTCAAACTGATCATATTGCGAAACTTATCg                                                                                                                                                                                                                                                          ]




>consensus_10536#0
CTTGCGGGTTTTCGAAATAACGTCTTAGTAAGTGTTCGTCCCGGCAATGTTAACTGAGTC
GCAGAACTCTCATCCTAAAGAAGCAGAAAATAAATTGATTGAAAAATATCAAAGCATAGT
CAGAAATGATGTCGAACCTGACGAAGCTTCTATCAAAGCTAAGGAACAAGCTATACTAGA
ACTTGGAAATTTACTCGCTGAAAAGAAAGATGCAAAAGGATTGGGAGATCTCATTTTAGT
AACTCGACCGTTTCTCAAGCTGATCAGCAAAGCAAAAGCCGGTCGTCTTGTCAGAACTCT
GGTTGATTTGTTTTTGGATCTTGAAGGAGGAACTGGTCGGGAGGTTGATCTCTGTCTTGA
ATGCGTTGAATGGGCCAATCAGGAAAAACGTATTTTTCTTCGTCAGGCATTAGAAGCTCG
TCTCATGGGTCTTTATTATGATAATGGAAGTTATGAAGAAGCATTGAAATTAGGTTCAAA
TTTATTGCGTGAACTTAAAAAGCTGGATGATAAAGCTCTTTTGGTTGAGGTTCAACTCAT
GGAGAGTCGAGTTTATTATAGATTAGGTAATCTTCAACGGGCCCGTGCTGCGCTTACATC
TGCTAGAACTACAGCAAATGGTATATATTGCCCACCACGTTTACAGGCCAACCTTGATCT
ACTTTCCGGAATTCTACACGCTGCTGATGAACGTGATTTCAAAACTGCATTTTCTTACTT
TTATGAAGCATTCGAAGGCTTTGACTCAATTAGTTCCAAACGAGCTGTTGATGCTCTTAA
ATACATGTTACTGTCAAAAATTATGTTAAATAGTGCTGATGAAATCCCTGGTATTCTTAC
AAGTAAATTAGCTCTAAAATATACAAGCCGTGATATTGATGCTATGCGAGAAGTTGGGAT
TGCTGCTAAAGAACGATCATTGGGTGATTTTCTGCTGCTTCAAGAGAAGTACAAAACTGA
ATTATCTGGAGATCCAGTAATTAGTAGACATCTTCATTCATTCTATGATACATTATTTGG
TCAAAATCTTCTCAAACTTATTGAACCATATTCTCGTGTTCAAATTGATCATATTGCGAA
ACTTATCAATATTCCTTTGGAAACTGTAGAAAAGAAACTTTCACAAATGATTTTGGACAA
TGAACACAATGGAATTCTGGATCAAGGTTCTGGCGTTCTAGTACTCAGAGAACCAGAATG
TGATGGTAAAGACTATCCTTTAGCACTATCTGCAATCCAATCTCTTGGAGGTGTTGTTGA
TATGTTATTCCAAAAGACCCCGAAATTAAAATAACATTTTGGATTTCCTACCTAATGATT
TTTTTTAAAATATAGTTC

consensusID : consensus_10536#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 695
fasta sequence

                              [CTCGCAGCCAAAAATTCGGCACGAGGTTAAAAAGCTGGATGATAAAGCTCTTTTGGTTGAGGTTCAACTCATGGAGAGTCGAGTTTATTATAGATTAGGTAATCTTCAACGGGCCCGTGCTGCGCTTACATCTGCTAGAACTACAGCAAATGGTATATATTGCCCACCACGTTTACAGGCCAACCTTGATCTACTTTCCGGAATTCTACACGCTGCTGATGAAACTTTTATGAAGCATTCGAAGGCTTTGACTCAATTAGTTCCAAACGAGCTGTTGATGCTCTTAAATACATGTTACTGTCAAAAATTATGTTAAATAGTGCTGATGAAATCCCTGGTATTCTTACAAGTAAATNNNNNNNNNNNNNNNNAAGCCGTGATATTGATGCTATGCGAGAAGTTGGGATTGCTGCTAAAGAACGATCATTGGGTGATTTTCTGCTGCTTCAAGAGAAGTACAAAACTGAATTATCTGGAGATCCAGTAATTAGTAGACATCTTCATTCATTCTATGATACATTATTTGGTCAAAATCTTCTCAAACTTATTGAACCATATTCTCGTGTTCAAATTGATCATATTGCGAAACTTATCAATATTCCTTTGGAAACTGTAGAAAAGAAACTTTCACAAATGATTTTGGACAATGAACACAATGGAATTCTGGATCAAGGTTCTGGCGTTCATCCTTTAGC]

[+] EMBL CD080922             [CTCGCAGCCAAAAATTCGGCACGAGGTTAAAAAGCTGGATGATAAAGCTCTTTTGGTTGAGGTTCAACTCATGGAGAGTCGAGTTTATTATAGATTAGGTAATCTTCAACGGGCCCGTGCTGCGCTTACATCTGCTAGAACTACAGCAAATGGTATATATTGCCCACCACGTTTACAGGCCAACCTTGATCTACTTTCCGGAATTCTACACGCTGCTGATGAAACTTTTATGAAGCATTCGAAGGCTTTGACTCAATTAGTTCCAAACGAGCTGTTGATGCTCTTAAATACATGTTACTGTCAAAAATTATGTTAAATAGTGCTGATGAAATCCCTGGTATTCTTACAAGTAAATNNNNNNNNNNNNNNNNAAGCCGTGATATTGATGCTATGCGAGAAGTTGGGATTGCTGCTAAAGAACGATCATTGGGTGATTTTCTGCTGCTTCAAGAGAAGTACAAAACTGAATTATCTGGAGATCCAGTAATTAGTAGACATCTTCATTCATTCTATGATACATTATTTGGTCAAAATCTTCTCAAACTTATTGAACCATATTCTCGTGTTCAAATTGATCATATTGCGAAACTTATCAATATTCCTTTGGAAACTGTAGAAAAGAAACTTTCACAAATGATTTTGGACAATGAACACAATGGAATTCTGGATCAAGGTTCTGGCGTTCATCCTTTAGC]




>consensus_10536#1
CTCGCAGCCAAAAATTCGGCACGAGGTTAAAAAGCTGGATGATAAAGCTCTTTTGGTTGA
GGTTCAACTCATGGAGAGTCGAGTTTATTATAGATTAGGTAATCTTCAACGGGCCCGTGC
TGCGCTTACATCTGCTAGAACTACAGCAAATGGTATATATTGCCCACCACGTTTACAGGC
CAACCTTGATCTACTTTCCGGAATTCTACACGCTGCTGATGAAACTTTTATGAAGCATTC
GAAGGCTTTGACTCAATTAGTTCCAAACGAGCTGTTGATGCTCTTAAATACATGTTACTG
TCAAAAATTATGTTAAATAGTGCTGATGAAATCCCTGGTATTCTTACAAGTAAATNNNNN
NNNNNNNNNNNAAGCCGTGATATTGATGCTATGCGAGAAGTTGGGATTGCTGCTAAAGAA
CGATCATTGGGTGATTTTCTGCTGCTTCAAGAGAAGTACAAAACTGAATTATCTGGAGAT
CCAGTAATTAGTAGACATCTTCATTCATTCTATGATACATTATTTGGTCAAAATCTTCTC
AAACTTATTGAACCATATTCTCGTGTTCAAATTGATCATATTGCGAAACTTATCAATATT
CCTTTGGAAACTGTAGAAAAGAAACTTTCACAAATGATTTTGGACAATGAACACAATGGA
ATTCTGGATCAAGGTTCTGGCGTTCATCCTTTAGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10536#0      CTTGCGGGTTTTCGAAATAACGTCTTAGTAAGTGTTCGTCCCGGCAATGTTAACTGAGTC 60
consensus_10536#1      ------------------------------------------------------------
                                                                                   

consensus_10536#0      GCAGAACTCTCATCCTAAAGAAGCAGAAAATAAATTGATTGAAAAATATCAAAGCATAGT 120
consensus_10536#1      ------------------------------------------------------------
                                                                                   

consensus_10536#0      CAGAAATGATGTCGAACCTGACGAAGCTTCTATCAAAGCTAAGGAACAAGCTATACTAGA 180
consensus_10536#1      ------------------------------------------------------------
                                                                                   

consensus_10536#0      ACTTGGAAATTTACTCGCTGAAAAGAAAGATGCAAAAGGATTGGGAGATCTCATTTTAGT 240
consensus_10536#1      ------------------------------------------------------------
                                                                                   

consensus_10536#0      AACTCGACCGTTTCTCAAGCTGATCAGCAAAGCAAAAGCCGGTCGTCTTGTCAGAACTCT 300
consensus_10536#1      ------------------------------------------------------------
                                                                                   

consensus_10536#0      GGTTGATTTGTTTTTGGATCTTGAAGGAGGAACTGGTCGGGAGGTTGATCTCTGTCTTGA 360
consensus_10536#1      ------------------------------------------------------------
                                                                                   

consensus_10536#0      ATGCGTTGAATGGGCCAATCAGGAAAAACGTATTTTTCTTCGTCAGGCATTAGAAGCTCG 420
consensus_10536#1      ------------------------------------------------------------
                                                                                   

consensus_10536#0      TCTCATGGGTCTTTATTATGATAATGGAAGTTATGAAGAAGCATTGAAATTAGGTTCAAA 480
consensus_10536#1      ------------------------------------------------CTCGCAGCCAAA 12
                                                                        *      ****

consensus_10536#0      TTTATTGCGTGAACTTAAAAAGCTGGATGATAAAGCTCTTTTGGTTGAGGTTCAACTCAT 540
consensus_10536#1      AATTCGGCACGAGGTTAAAAAGCTGGATGATAAAGCTCTTTTGGTTGAGGTTCAACTCAT 72
                         *   **  **  **********************************************

consensus_10536#0      GGAGAGTCGAGTTTATTATAGATTAGGTAATCTTCAACGGGCCCGTGCTGCGCTTACATC 600
consensus_10536#1      GGAGAGTCGAGTTTATTATAGATTAGGTAATCTTCAACGGGCCCGTGCTGCGCTTACATC 132
                       ************************************************************

consensus_10536#0      TGCTAGAACTACAGCAAATGGTATATATTGCCCACCACGTTTACAGGCCAACCTTGATCT 660
consensus_10536#1      TGCTAGAACTACAGCAAATGGTATATATTGCCCACCACGTTTACAGGCCAACCTTGATCT 192
                       ************************************************************

consensus_10536#0      ACTTTCCGGAATTCTACACGCTGCTGATGAACGTGATTTCAAAACTGCATTTTCTTACTT 720
consensus_10536#1      ACTTTCCGGAATTCTACACGCTGCTGATGAA-------------------------ACTT 227
                       *******************************                         ****

consensus_10536#0      TTATGAAGCATTCGAAGGCTTTGACTCAATTAGTTCCAAACGAGCTGTTGATGCTCTTAA 780
consensus_10536#1      TTATGAAGCATTCGAAGGCTTTGACTCAATTAGTTCCAAACGAGCTGTTGATGCTCTTAA 287
                       ************************************************************

consensus_10536#0      ATACATGTTACTGTCAAAAATTATGTTAAATAGTGCTGATGAAATCCCTGGTATTCTTAC 840
consensus_10536#1      ATACATGTTACTGTCAAAAATTATGTTAAATAGTGCTGATGAAATCCCTGGTATTCTTAC 347
                       ************************************************************

consensus_10536#0      AAGTAAATTAGCTCTAAAATATACAAGCCGTGATATTGATGCTATGCGAGAAGTTGGGAT 900
consensus_10536#1      AAGTAAATNNNNNNNNNNNNNNNNAAGCCGTGATATTGATGCTATGCGAGAAGTTGGGAT 407
                       ********                ************************************

consensus_10536#0      TGCTGCTAAAGAACGATCATTGGGTGATTTTCTGCTGCTTCAAGAGAAGTACAAAACTGA 960
consensus_10536#1      TGCTGCTAAAGAACGATCATTGGGTGATTTTCTGCTGCTTCAAGAGAAGTACAAAACTGA 467
                       ************************************************************

consensus_10536#0      ATTATCTGGAGATCCAGTAATTAGTAGACATCTTCATTCATTCTATGATACATTATTTGG 1020
consensus_10536#1      ATTATCTGGAGATCCAGTAATTAGTAGACATCTTCATTCATTCTATGATACATTATTTGG 527
                       ************************************************************

consensus_10536#0      TCAAAATCTTCTCAAACTTATTGAACCATATTCTCGTGTTCAAATTGATCATATTGCGAA 1080
consensus_10536#1      TCAAAATCTTCTCAAACTTATTGAACCATATTCTCGTGTTCAAATTGATCATATTGCGAA 587
                       ************************************************************

consensus_10536#0      ACTTATCAATATTCCTTTGGAAACTGTAGAAAAGAAACTTTCACAAATGATTTTGGACAA 1140
consensus_10536#1      ACTTATCAATATTCCTTTGGAAACTGTAGAAAAGAAACTTTCACAAATGATTTTGGACAA 647
                       ************************************************************

consensus_10536#0      TGAACACAATGGAATTCTGGATCAAGGTTCTGGCGTTCTAGTACTCAGAGAACCAGAATG 1200
consensus_10536#1      TGAACACAATGGAATTCTGGATCAAGGTTCTGGCGTTC-ATCCTTTAGC----------- 695
                       ************************************** *    * **            

consensus_10536#0      TGATGGTAAAGACTATCCTTTAGCACTATCTGCAATCCAATCTCTTGGAGGTGTTGTTGA 1260
consensus_10536#1      ------------------------------------------------------------
                                                                                   

consensus_10536#0      TATGTTATTCCAAAAGACCCCGAAATTAAAATAACATTTTGGATTTCCTACCTAATGATT 1320
consensus_10536#1      ------------------------------------------------------------
                                                                                   

consensus_10536#0      TTTTTTAAAATATAGTTC 1338
consensus_10536#1      ------------------