These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10538#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 481 fasta sequence [AAGTGACCTGCGCGAGGCTGGGCAGGCTGTCGCTTCAGCTGGACGAACACATTTCTTTCTTTCGCATCACGTCTTTTTACGTCATTCTCTTTCACACGACGGAGGAAATCTTCTCTGCACTTACTGGGCTTCACATGCTCAATCCTTACATTTATTCGTTTCGGAATTATTCGATTACCGACACGCTTATTGACGATTATTCCAACAGCATGAGGAGTGACGTTATAAACGCGACCAGTCCGGCCATGATATGACTTGTGGGGCATACCTTTTTGGACACCACCATCACCCTTTATATCTACGATATCACCACGTCGATACACTCGCATATAAACCGAAGATGGCAGGGGTCCATGGTGCCTGAATTTTCGAGAAAATAAGTATCTTGTGCCTCGACGGTATCCTTTGGTGTTTGTCATTCTACCACCTCGTGATCAGAAGTTTGCCGAACGCGGACCCTCTACTAGACTCACAAAACAGG] [-] EMBL AI977035 [AAGTGACCTGCGCGAGGCTGGGCAGGCTGTCGCTTCAGCTGGACGAACACATNTCTTTCTTTCGCATCACGTCTTTTTACGTCATTCTCTTTCACACGACGGAGGAAATCTTCTCTGCACTTACTGGGCTTCACATGCTCAATCCTTACATTTATTCGTTTCGGAATTATTCGATTACCGACACGCTTATTGACGATTATTCCAACAGCATGAGGAGTGACGTTATAAACGCGACCAGTCCGGCCATGATATGACTTGTGGGGCATACCTTTTTGGACACCACCATCACCCTTTATATCTACGATATCACCACGTCGATACACTCGCATATAAACCGAAGATGGCAGGGGTCCATGGTGCCTGAATTTTCGAGAAAATAAGTATCTTGTGCCTCGACGGTATCCTTTGGTGTTTGTCATTCTACCA ] [+] EMBL CD139215 [ AGGCTGGGCAGGCTGTCGCTTCAGCTGGACGAACACATTTCTTTCTTTCGCATCACGTCTTTTTACGTCATTCTCTTTCACACGACGGAGGAA ] [-] EMBL CD139079 [ GGCTGGGCAGGCTGTCGCTTCAGCTGGACGAACACATTTCTTTCTTTCGCATCACGTCTTTTTACGTCATTCTCTTTCACACGACGGAGGAAATCTTCTCTGCACTTGCTaagg ] [-] EMBL CD139105 [ GGCTGGGCAGGCTGTCGCTTCAGCTGGACGAACACATTTCTTTCTTTCGCATCACGTCTTTTTACGTCATTCTCTTTCACACGACGGAGGAAATCTTCTCTGCACTTGCTGGTCTaag ] [-] EMBL CD139101 [ GGCTGGGCAGGCTGTCGCTTCAGCTGGACGAACACATTTCTTTCTTTCGCATCACGTCTTTTTACGTCATTCTCTTTCACAGGACGGAGGAAA ] [-] EMBL CD139169 [ GGCTGGGCAGGCTGTCGCTTCAGCTGGACGAACACATTTCTTTCTTTCGCATCACGTCTTTTTACGTCATTCTCTTTCACACGACGGAGGAAA ] [+] EMBL CD094872 [ GCAGGCTGTCGCTTCAGCTGGACGAACACATTTCTTTCTTTCGCATCACGTCTTTTTACGTCATTCTCTTTCACACGACGGAGGAAATCTTCTCTGCACTTACTGGGCTTCACATGCTCAATCCTTACATTTATTCGTTTCGGAATTATTCGATTACCGACACGCTTATTGACGATTATTCCAACAGCATGAGGAGTGACGTTATAAACGCGACCAGTCCGGCCATGATATGACTTGTGGGGCATACCTTTTTGGACACCACCATCACCCTTTATATCTACGATATCACCACGTCGATACACTCGCATATAAACCGAAGATGGCAGGGGTCCATGGTGCCTGAATTTTCGAGAAAATAAGTATCTTGTGCCTCGACGGTATCCTTTGGTGTTTGTCATTCTACCACCTCGTGATCAGAAGTTTGCCGAACGCGGGCCCGCT ] [+] EMBL CD190950 [ GAACACATTTCTTTCTTTCGCATCACGTCTTTTTACGTCACTCTCTTTCACACGACGGAGGAAATCTTCTCTGCACTTACTGGGCTTCACATGCTCAATCCTTACATTTATTCGTTTCGGAATTATTCGATTACCGACACGCTTATTGACGATTATTCCAACAGCATGAGGAGTGACGTTATAAACGCGACCAGTCCGGCCATGATATGACTTGTGGGGCATACCTTTTTGGACACCACCATCACCCTTTATATCTACGATATCACCACGTCGATACACTCGCATATAAACCGAAGATGGCAGGGGTCCATGGTGCCTGAATTTTCGAGAAAATAAGTATCTTGTGCCTCGACGGTATCCTTT ] [+] EMBL CD188315 [ CACATTTCTTTCTTTCGCATCACGTCTTTTTACGTCATTCTCATTCACACGACGGAGGAAATCTTCTCTGCACTTACTGGGCTTCACATGCTCAATCCTTACATTTATTCGTTTCGGAATTATTCGATTACCGACACGCTTATTGACGATTATTCCAACAGCATGAGGAGTGACGTTATAAACGCGACCAGTCCGGCCATGATATGACTTGTGGGGCATACCTTTTTGGACACCACCATCACCCTTTATATCTACGATATCACCACGTCGATACACTCGCATATAAACCGAAGATGGCAGGGGTCCATGGTGCCTGAATTTTCGAGAAAATAAGTATCTTGTGCCTCGACGGTATCCTTTGGTGTTTGTCATTCTACCACCTCGTGATCAGAAGTTT ] [-] EMBL CD185677 [ GCTTCACATGCTCAATCCTTACATTTATTCGTTTCGGAATTATTCGATTACCGACACGCTTATTGACGATTATTCCAACAGCATGAGGAGTGACGTTATAAACGCGACCAGTCCGGCCATGATATGACTTGTGGGGCATACCTTTTTGGACACCACCATCACCCTTTATATCTACGATATCACCACGTCGATACACTCGCATATAAACCGAAGATGGCAGGGGTCCATGGTGCCTGAATTTTCGAGAAAATAAGTATCTTGTGCCT ] [-] EMBL CD186021 [ CACATGCTCAATCCTTACATTTATTCGTTTCGGAATTATTCGATTACCGACACGCTTATTGACGATTATTCCAACAGCATGAGGAGTGACGTTATAAACGCGACCAGTCCGGCCATGATATGACTTGTGGGGCATACCTTTTTGGACACCACCATCACCCTTTATATCTACGATATCACCACGTCGATACACTCGCATATAAACCGAAGATGGCAGGGGTCCATGGTGCCTGAATTTTCGAGAAAATAAGTATCTTGTGCCTCGACGGTATCCTTTGGTGTTTGTCATTCTACCACCTCGTGATCAGAAGTTTG ] [+] EMBL CD141977 [ CTCAATCCTTACATTTATTCGTTTCGGAATTATTCGATTACCGACACGCTTATTGACGATTATTCCAACAGCATGAGGAGTGACGTTATAAACGCGACCAGTCCGGCCATGATATGACTTGTGGGGCATACCTTTTTGGACACCACCATCACCCTTTATATCTACGATATCACCACGTCGATACACTCGCATATAAACCGAAGATGGCAGGGGTCCATGGTGCCTGAATTTTCGAGAAAATAAGTATCTTGTGCCTCGACGGTATCCTTTGGTGTTTGTCATTCTACCACCTCGTGATCAGAAGTTTGCCGAACGCGGACCCTCTACTAGACTCACAAAACAGG] [-] EMBL CD185937 [ TCAATCCTTACATTTATTCGTTTCGGAATTATTCGATTACCGACACGCTTATTGACGATTATTCCAACAGCATGAGGAGTGACGTTATAAACGCGACCAGTCCGGCCATGATATGACTTGTGGGGCATACCTTTTTGGACACCACCATCACCCTTTATATCTACGATATCACCACGTCGATACACTCGCATATAAACCGAAGATGGCAGGGGTCCATGGTGCCTGAATTTTCGAGAAAATAAGTATCTTGTGCCT ] [-] EMBL CD142040 [ TCAATCCTTACATTTATTCGTTTCGGAATTATTCGATTACCGACACGCTTATTGACGATTATTCCAACAGCATGAGGAGTGACGTTATAAACGCGACCAGTCCGGCCATGATATGACTTGTGGGGCATACCTTTTTGGACACCACCATCACCCTTTATATCTACGATATCACCACGTCGATACACTCGCATATAAACCGAAGATGGCAGGGGTCCATGGTGCCTGAATTTTCGAGAAAATAAGTATCTTGTGCCTCGACGGTATCCTTTGGTGTTTGTCATTCTACCACCTCGTGATCAGAAGTTTGCCGAACGCGGACCCTCT ] [-] EMBL CD185858 [ TCAATCCTTACATTTATTCGTTTCGGAATTATTCGATTACCGACACGCTTATTGACGATTATTCCAACAGCATGAGGAGTGACGTTATAAACGCGACCAGTCCGGCCATGATATGACTTGTGGGGCATACCTTTTTGGACACCACCATCACCCTTTATATCTACGATATCACCACGTCGATACACTCGCATATAAACCGAAGATGGCAGGGGTCCATGGTGCCTGAATTTTCGAGAAAATAAGTATCTTGTGCCTCGACGGTATCCTTTGGTGTTTGTCATTCTACCACCTCGTGATCAGAAGTTTG ] [+] EMBL CD059830 [ TTATTCGTTTCGGAATTATTCGATTACCGACACGCTTATTGACGATTATTCCAACAGCATGAGGAGTGACGTTATAAACGCGACCAGTCCGGCCATGATATGGCTTGGGGGGCATACCTTTTTGGACACCACCATCACCCTTTATATCTACGATATCACCACGTCGATACACTCGCATATAAACCGAAGATGGCAGGGGTCCATGGTGCCTGAATTTTCAAGA ] [-] EMBL CD181092 [ GACGTTATAAACGCGACCAGTCCGGCCATGATATGACTTGTGGGGCATACCTTTTTGGACACCACCATCACCCTTTATATCTACGATATCACCACGTCGATACACTCGCATATAAACCGAAGATGGCAGGGGTCCATGGTGCCTGAATTTTCGAGAAAATAAGTATCTTGTGCCTCGACGGTATCCTTTGGTGTTTGTCA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||