cluster # 10540

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Schistosoma mansoni
cluster # 10540 cluster # 10540 Sequences # 17 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10540#0 length = 1368 sequences # 7
consensus_10540#1 length = 658 sequences # 2
consensus_10540#2 length = 513 sequences # 2

consensus_10540#3 length = 500 sequences # 1
consensus_10540#4 length = 476 sequences # 2
consensus_10540#5 length = 444 sequences # 3

consensusID : consensus_10540#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1368
fasta sequence

                              [AAACATATATTTCATATAGATATTACAATGCAAGCAAAAATTATGGCACAGAGGTCCATTAATTTTTAATTACTGGCCAGCTTGGTTTCTGAGGAGTACATAAACTTGTTCTTTGATCCAGTTTTTATGATGTGGAACATATGTGTATGTAGATTCATGAAAAACTAGACAACTAAGGTCAGCCAACTGATCGATGAACTGGAAAAGTTG-GGATATGTCATAAGTGATAGTAGGAGCATTAGGTTTTTCACGTTTTAACTGCTCTTCATATATCTTGCATACACCCTCCAAACATTGCTCTACAGTTTCATAATCCGACCATGTACGAATATCTGG-TTTTTTGACAGAAGGCTGTACAAGTAATATTGTGTGAGGCATCTTGAAACCTAAAGGAAAATAAAGTGGTTAACAAATTTCCTTTCTAAAGGAGAAGTGAAAAGTTCAGTAAAGTTTTTACTAGTATATTTGTGAACTAAAGAAGTACAGAAATAAGTTAGGTAGTTTAATCTGTTTAAAAAGTAGGAATAATCATTTCATACCATGTGGTATATCTGGAGAAATTACAGTAAATACAAGTCAGATTTTTACCCGTATCATACTAGTTCAGATGAAAACGCCAATGATCATAAACAGCACAACCCCGAGTGACAGTAACCCAAGGTGGTAATCTTGACAAAAAGTCTGAGAGTGGAGGAGAGCGAGTAGAGACACCTTCGTCAACATACAGGCCAGCAATAGCTACGTCAATATAACTTGATTGTGATAGTACTTCCTGGGATTCAAAAACAACCCAAAATGTCCACGGTGTTTCCCATAAGACCCCATGTTCACCAAACGCTGCTGCATTCAAATGGTATAAAAAATAATGTTCACCTTTGTTGCTTGGAATATCGCTAATTAATGGAGGAGGGAGTGGCATAGATGAAGGATACATTGCAGTCGATGCAAACGACCATGCAGTTAACTTGGTATAGTTCTCATCTGTACGAATTAAGATATGAGTATGGGGAGGACCGGAAACTACAGAGAATGTAACGTTCCAACTCAAGCGACCATTTGGTAAGTAATTCATTAACAATGTGCGTGACAGTAACTTTAACTTTACATTTGGTTNTATTTTGTGAAATTNAGNAGGAACACGATAAAAATATCTGGGGATATGAAGAATAGGATAAACAGATGCTACACCACAATAAGGTTGACTGTAATTGCACCCCGCGGGTTCTGCATCCCCCCGCTCTTTGATACCTTTGGATTTTGACTGATTATGCTCGTTTGAATTCTTCTCTCCTCTAAGTGCGGACATAGGGTGTGAATTAGGTGTCNGCTTCCGGTTACCGTTCGCTTCNTTTGGGTCCCTCTGGATAT]

[+] EMBL CD073242             [AAACATATATTTCATATAGATATTACAATGCAAGCAAAAATTATGGCACAGAGGTCCATTAATTTTTAATTACTGGCCAGCTTGGTTTCTGAGGAGTACATAAACTTGTTCTTTGATCCAGTTTTTATGATGTGGAACATATGTGTATGTAGATTCATGAAAAACTAGACAACTAAGGTCAGCCAACTGATCGATGAACTGGAAAAGTTG GGATATGTCATAAGTGATAGTAGGAGCATTAGGTTTTTCACGTTTTAACTGCTCTTCATATATCTTGCATACACCCTCCAAACATTGCTCTACAGTTTCATAATCCGACCATGTACGAATATCTGG TTTTTTGACAGAAGGCTGTACAAGTAATATTGTGTGAGGCATCTTGAAACCTAAAGGAAAATAAAGTGGTTAACAAATTTCCTTTCTAAAGGAGAAGTGAAAAGTTCAGTAAAGTTTTTACTAGTATATTTGTGAACTAAAGAAGTACAGAAATAAGTTAGGTAGTTTAATCTGTTTAAAAAGTAGGAATAATCATTTCATACCATGTGGTATATCTGGAGAAATTACAGTAAATACAAGTCAGATTTTTACCCGTATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL SMAA43820            [ AACATATATTTCATATAGATATTACAATGCAAGCAAAAATTATGGCACAGAGGTCCATTAATTTTTAATTACTGGCCAGCTTGGTTTCTGAGGAGTACATAAACTTGTTCTTTGATCCAGTTTTTATGATGTGGAACATATGTGTATGTAGATTCATGAAAAACTAGACAACTAAGGTCAGCCAACTGATCGATGAACTGGAAAAGTTGACGGTATGTCATAAGTGATAGTAGGAGCATTAGGTTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD136868             [    cacgccTTCATATAGATATTACAATGCAAGCAAAAATTATGGCACAGAGGTCCATTAATTTTTAATTACTGGCCAGCTTGGTTTCTGAGGAGTACATAAACTTGTTCTTTGATCAAGTTTTTATGATGTGGAACATATGTGTATGTAGATTCATGAAAAACTAGACAACTAAGGTCAGCCAACTGATCGGTGAACTGGAAAAGTTG GGATATGTCATAAGTGATAGTAGGAGCATTAGGTTTTTCACGTTTTAGCTGCTCTTCATATATCTTGCATACACCCTCCAAACATTGCTCTACAGTTTCATAATCCGACCATGTACGAGTATCTGGTTTTTTTGACAGAAGGCTGTACAAGTAATATTGTGTGAGGCATCTTGAAACCatgcaacaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD078782             [                                                                                                                                                                                                                                                                                                                                                                                                                                              AGAAGTGAAAAGTTCAGTAAAGTTTTTACTAGTATATNTGTGAACTAAAGAAGTACAGAAATAAGTTAGGTAGTTTAATCTGTTTAAAAAGTAGGAATAATCATTTCATACCATGTGGTATATCTGGAGAAATTACAGTAAATACAAGTCAGATTTTTACCCGTATCATACTAGTTCAGATGAAAACGCCAATGATCATAAACAGCACAACCCCGAGTGACAGTAACCCAAGGTGGTAATCTTGACAAAAAGTCTGAGAGTGGAGGAGAGCGAGTAGAGACACCTTCGTCAACATACAGGCCAGCAATAGCTACGTCAATATAACTTAATTGTGATAGTACTTCCTGGGATTCAAAAACAACCCAAAATGTCCACGGTGTTTCCCATAAGACCCCATGTTCACCAAACGCTGCTGCATTCAAATGGTATAAAAAATAATGTTCACCTTTGTTGCTTGGAATATCGCTAATTAATGGAGGAGGGAGTGGCATAGATGAAGGATACATTGCAGTCGATGCAAACGACCATGCAGTTAACTTGGTATAGTTCTCATCTGTACGAATTAAGATATGAGTATGGGGAGGACCGGAAACTACAGAGAATGTAACGTTCCAACTCA                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD074823             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTTTACTAGTATATTTGTGAACTAAAGAAGTACAGAAATAAGTTAGGTAGTTTAATCTGTTTAAAAAGTAGGAATAATCATTTCATACCATGTGGTATATCTGGAGAAATTACAGTAAATACAAGTCAGATTTTTACCCGTATCATACTAGTTCAGATGAAAACGCCAATGATCATAAACAGCACAACCCCGAGTGACAGTAACCCAAGGTGGTAATCTTGACAAAAAGTCTGAGAGTGGAGGAAAGCGAGTAGAGACACCTTCGTCAACATACAGGCCAGCAATAGCTACGTCAATATAACTTGATTGTGATAGTACTTCCTGGGATTCAAAAACAACCCAAAATGTCCACGGTGTTTCCCATAAGACCCCATGTTCACCAAACGCTGCTGCATTCAAATGGTATAAAAAATAATGTTCACCTTTGTTGCTTGGAATATCGCTAATTAATGGAGGAGGGAGTGGCATANATGAAGGATACATTGCAGTCGATGCAAACGACCATGCAGTTAACTTGGTATAGTTCTCATCTGTACGAATTAAGATATGAGTATGGGGAGGACCGGAAACTACAGAGAATGTAACGTTCCAACTCAAGCGACCATTTGGTAAGTAATTCATTAACAATGTGCGTGACAGTAACTTTAACTTTAC                                                                                                                                                                                                                                                                       ]
[+] EMBL CD075369             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACTAGTATATTTGTGAACTAAAGAAGTACAGAAATAAGTTAGGTAGTTTAATCTGTTTAAAAAGTAGGAATAATCATTTCATACCATGTGGTATATCTGGAGAAATTACAGTAAATACAAGTCAGATTTTTACCCGTATCATACTAGTTCAGATGAAAACGCCAATGATCATAAACAGCACAACCCCGAGTGACAGTAACCCAAGGTGGTAATCTTGACAAAAAGTCTGAGAGTGGAGGAGAACGAGTAGAGACACCTTCGTCAACATACAGGCCAGCAATAGCTACGTCAATATAACTTGATTGTGATAGTACTTCCTGGGATTCAAAAACAACCCAAAATGTCCACGGTGTTTCCCATAAGACCCCATGTTCACCAAACGCTGCTGCATTCAAATGGTATAAAAAATAATGTTCACCTTTGTTGCTTGGAATATCGCTAATTAATGGAGGAGGGAGTGGCATAGATGAAGGATACATTGCAGTCGATGCAAACGACCATGCAGTTAACTTGGTATAGTTCTCATCTGTACGAATTAga                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD152888             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TAAGTAATTNATTAACAATGTGCGTGAGAGTAACTTTAANTTTACATTTGGTTNTATTTTGTGAAATTNAGNAGGAACACGATAAAAATATCTGGGGATATGAAGAATAGGATAAACAGATGCTACACCACAATAAGGTTGACTGTAATTGCACCCCGCGGGTTCTGCATCCCCCCGCTCTTTGATACCTTTGGATTTTGACTGATTATGCTCGTTTGAATTCTTCTCTCCTCTAAGTGCGGACATAGGGTGTGAATTAGGTGTCNGCTTCCGGTTACCGTTCGCTTCNTTTGGGTCCCTCTGGATAT]




>consensus_10540#0
AAACATATATTTCATATAGATATTACAATGCAAGCAAAAATTATGGCACAGAGGTCCATT
AATTTTTAATTACTGGCCAGCTTGGTTTCTGAGGAGTACATAAACTTGTTCTTTGATCCA
GTTTTTATGATGTGGAACATATGTGTATGTAGATTCATGAAAAACTAGACAACTAAGGTC
AGCCAACTGATCGATGAACTGGAAAAGTTGGGATATGTCATAAGTGATAGTAGGAGCATT
AGGTTTTTCACGTTTTAACTGCTCTTCATATATCTTGCATACACCCTCCAAACATTGCTC
TACAGTTTCATAATCCGACCATGTACGAATATCTGGTTTTTTGACAGAAGGCTGTACAAG
TAATATTGTGTGAGGCATCTTGAAACCTAAAGGAAAATAAAGTGGTTAACAAATTTCCTT
TCTAAAGGAGAAGTGAAAAGTTCAGTAAAGTTTTTACTAGTATATTTGTGAACTAAAGAA
GTACAGAAATAAGTTAGGTAGTTTAATCTGTTTAAAAAGTAGGAATAATCATTTCATACC
ATGTGGTATATCTGGAGAAATTACAGTAAATACAAGTCAGATTTTTACCCGTATCATACT
AGTTCAGATGAAAACGCCAATGATCATAAACAGCACAACCCCGAGTGACAGTAACCCAAG
GTGGTAATCTTGACAAAAAGTCTGAGAGTGGAGGAGAGCGAGTAGAGACACCTTCGTCAA
CATACAGGCCAGCAATAGCTACGTCAATATAACTTGATTGTGATAGTACTTCCTGGGATT
CAAAAACAACCCAAAATGTCCACGGTGTTTCCCATAAGACCCCATGTTCACCAAACGCTG
CTGCATTCAAATGGTATAAAAAATAATGTTCACCTTTGTTGCTTGGAATATCGCTAATTA
ATGGAGGAGGGAGTGGCATAGATGAAGGATACATTGCAGTCGATGCAAACGACCATGCAG
TTAACTTGGTATAGTTCTCATCTGTACGAATTAAGATATGAGTATGGGGAGGACCGGAAA
CTACAGAGAATGTAACGTTCCAACTCAAGCGACCATTTGGTAAGTAATTCATTAACAATG
TGCGTGACAGTAACTTTAACTTTACATTTGGTTNTATTTTGTGAAATTNAGNAGGAACAC
GATAAAAATATCTGGGGATATGAAGAATAGGATAAACAGATGCTACACCACAATAAGGTT
GACTGTAATTGCACCCCGCGGGTTCTGCATCCCCCCGCTCTTTGATACCTTTGGATTTTG
ACTGATTATGCTCGTTTGAATTCTTCTCTCCTCTAAGTGCGGACATAGGGTGTGAATTAG
GTGTCNGCTTCCGGTTACCGTTCGCTTCNTTTGGGTCCCTCTGGATAT

consensusID : consensus_10540#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 658
fasta sequence

                              [ACGAATTAAGATATGNNNNNNNNNNNNNNNNNAACTACAGAGAATGTAACGTTCCAACTCAAGCGACCATTTGGTAAGTAATTCATTAACAATGTGCGTGACAGTAACTTTAACTTTACATTTGGTTCTATTTTGTGAAATTCAGCAGGAACACGATAAAAATATCTGGGGATATGAAGAAAAGGATAAACAGAGGCTACCCCGCGGGTTCTGCATCAACAAGCTCTTTGATACCTTTGAATTTTGACTGATTATGCTCGTTTGAATTCATAAATAATCTAAGTGCGGACATAGGGTAAGAATTAGGTGTCAGATACCGAATACCATTCGCATNNNNNNNNNNNNNNNAGGATATGACTTTCTTCCTCTGTGATCTCAGGAGAATCTGGGATATGCCGAAGATATCTTGGGCTGACAAGAGGGTCTGAAAAATTTGGAGACGGCTGGATGCTGTATGGAAAGCCGTAATTCGATGCATGAATAAGGATTGTATACGACAAGCAAGCATTTAGCAACATCAAGGAAAGATATTTACTCCCAGTTCTTGAGGTGCATTGTAGCCGTCCTTGGTGAGCCGATGAATTGTCATCTTGTAAAGTCTTCGCCTTCCTCTGTCGAACACCACTCATTAACCTCGTGCCGAATTNTGGCCCTCGAG]

[-] EMBL CD080997             [ACGAATTAAGATATGNNNNNNNNNNNNNNNNNAACTACAGAGAATGTAACGTTCCAACTCAAGCGACCATTTGGTAAGTAATTCATTAACAATGTGCGTGACAGTAACTTTAACTTTACATTTGGTTCTATTTTGTGAAATTCAGCAGGAACACGATAAAAATATCTGGGGATATGAAGAAAAGGATAAACAGAGGCTACCCCGCGGGTTCTGCATCAACAAGCTCTTTGATACCTTTGAATTTTGACTGATTATGCTCGTTTGAATTCATAAATAATCTAAGTGCGGACATAGGGTAAGAATTAGGTGTCAGATACCGAATACCATTCGCATNNNNNNNNNNNNNNNAGGATATGACTTTCTTCCTCTGTGATCTCAGGAGAATCTGGGATATGCCGAAGATATCTTGGGCTGACAAGAGGGTCTGAAAAATTTGGAGACGGCTGGATGCTGTATGGAAAGCCGTAATTCGATGCATGAATAAGGATTGTATACGACAAGCAAGCATTTAGCAACATCAAGGAAAGATATTTACTCCCAGTTCTTGAGGTGCATTGTAGCCGTCCTTGGTGAGCCGATGAATTGTCATCTTGTAAAGTCTTCGCCTTCCTCTGTCGAACACCACTCATTAACCTCGTGCCGAATTNTGGCCCTCGAG]
[-] EMBL CD120666             [                                                                                                                                                                                                                                                                                                                                                                                                                                       TCTGAAAAATTTGGAGACGGCTGGATGCTGTATGGAAAGCCGTAATTCGATGCATGAATAAGGATTGTATACGACAAGCAAGCATTTAGCAACATCAAGGAAAGATATTTACTCCCAGTTCTTGAG                                                                                                             ]




>consensus_10540#1
ACGAATTAAGATATGNNNNNNNNNNNNNNNNNAACTACAGAGAATGTAACGTTCCAACTC
AAGCGACCATTTGGTAAGTAATTCATTAACAATGTGCGTGACAGTAACTTTAACTTTACA
TTTGGTTCTATTTTGTGAAATTCAGCAGGAACACGATAAAAATATCTGGGGATATGAAGA
AAAGGATAAACAGAGGCTACCCCGCGGGTTCTGCATCAACAAGCTCTTTGATACCTTTGA
ATTTTGACTGATTATGCTCGTTTGAATTCATAAATAATCTAAGTGCGGACATAGGGTAAG
AATTAGGTGTCAGATACCGAATACCATTCGCATNNNNNNNNNNNNNNNAGGATATGACTT
TCTTCCTCTGTGATCTCAGGAGAATCTGGGATATGCCGAAGATATCTTGGGCTGACAAGA
GGGTCTGAAAAATTTGGAGACGGCTGGATGCTGTATGGAAAGCCGTAATTCGATGCATGA
ATAAGGATTGTATACGACAAGCAAGCATTTAGCAACATCAAGGAAAGATATTTACTCCCA
GTTCTTGAGGTGCATTGTAGCCGTCCTTGGTGAGCCGATGAATTGTCATCTTGTAAAGTC
TTCGCCTTCCTCTGTCGAACACCACTCATTAACCTCGTGCCGAATTNTGGCCCTCGAG

consensusID : consensus_10540#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 513
fasta sequence

                              [AAAGTTTCAAGATAAAAACGCCAATGATCATAAACAGCACAACCCCGAGTGACAGTAACCCAAGGTGGTAATCTTGACAAAAAGTCTGAGAGTGGAGGAGAACGAGTAGAGACACCTTCGTCAACATACAGGCCAGCAATAGCTACGTCAATATAACTTGATTGTGATAGTACTTCCTGGGATTCAAAAACAACCCAAAATGTCCACGGTGTTTCCCATAAGACCCCATGTTCACCAAACGCTGCTGCATTCAAATGGTATAAAAAATAATGTTCACCTTTGTTGCTTGGAATATCGCTAATTAATGGAGGAGGGAGTGGCATAGATGAAGGATACATTGCAGTCGATGCAAACGACCATGCAGTTAACTTGGTATAGTTCTCATCTGTACGAATTAAGATATGAGTATGGGGAGGACCGGAAACTACAGAGAATGTAACGTTCCAACTCAAGCGACCATTTGGTAAGTAATTCATTAACAATGTGCGCCTCGTGCCGAATTNATGGCCTCGN]

[-] EMBL CD081545             [AAAGTTTCAAGATAAAAACGCCAATGATCATAAACAGCACAACCCCGAGTGACAGTAACCCAAGGTGGTAATCTTGACAAAAAGTCTGAGAGTGGAGGAGAACGAGTAGAGACACCTTCGTCAACATACAGGCCAGCAATAGCTACGTCAATATAACTTGATTGTGATAGTACTTCCTGGGATTCAAAAACAACCCAAAATGTCCACGGTGTTTCCCATAAGACCCCATGTTCACCAAACGCTGCTGCATTCAAATGGTATAAAAAATAATGTTCACCTTTGTTGCTTGGAATATCGCTAATTAATGGAGGAGGGAGTGGCATAGATGAAGGATACATTGCAGTCGATGCAAACGACCATGCAGTTAACTTGGTATAGTTCTCATCTGTACGAATTAAGATATGAGTATGGGGAGGACCGGAAACTACAGAGAATGTAACGTTCCAACTCAAGCGACCATTTGGTAAGTAATTCATTAACAATGTGCGCCTCGTGCCGAATTNATGGCCTCGN]
[-] EMBL CD113944             [                                                                                                                                                                        AGTAAGTCCTGGGATTCAAAAACGACCCAAAATGTCCACGGTGTTTCCCATAAGACCCCATGTTCACCAAACGCTGCTGCATTCAAATGGTATAAAAAATAATGTTCACCTTTGTTGCTTGGAATATCGCTAATTAATGGAGGAGGGAGTGGCATAGATGAAGGATACATAGCAGTCGATGCGAACGACCATGCAGTTAACTTGGTATAGTTCTCATCTGTACGAATTAAGATATGAGTATGGGGAGGACCGGAAACTACAGAGAATGTAACGT                                                                       ]




>consensus_10540#2
AAAGTTTCAAGATAAAAACGCCAATGATCATAAACAGCACAACCCCGAGTGACAGTAACC
CAAGGTGGTAATCTTGACAAAAAGTCTGAGAGTGGAGGAGAACGAGTAGAGACACCTTCG
TCAACATACAGGCCAGCAATAGCTACGTCAATATAACTTGATTGTGATAGTACTTCCTGG
GATTCAAAAACAACCCAAAATGTCCACGGTGTTTCCCATAAGACCCCATGTTCACCAAAC
GCTGCTGCATTCAAATGGTATAAAAAATAATGTTCACCTTTGTTGCTTGGAATATCGCTA
ATTAATGGAGGAGGGAGTGGCATAGATGAAGGATACATTGCAGTCGATGCAAACGACCAT
GCAGTTAACTTGGTATAGTTCTCATCTGTACGAATTAAGATATGAGTATGGGGAGGACCG
GAAACTACAGAGAATGTAACGTTCCAACTCAAGCGACCATTTGGTAAGTAATTCATTAAC
AATGTGCGCCTCGTGCCGAATTNATGGCCTCGN

consensusID : consensus_10540#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 500
fasta sequence

                              [CTAGTATATTTGTGAACTAAAGAAGTACAGAAATAAGTTAGGTAGTTTAATCTGTTTAAAAAGTAGGAATAATCATTTCATACCATGTGGTATATCTGGAGAAATTACAGTAAATACAAGTCAGATTTTTACCCGTATCATACTAGTTCAGATGAAAACGCCAATGATCATAAACAGCACAACCCCGAGTGACAGTAACCCAAGGTGGTAATCTTGACAAAAAGTCTGAGAGTGGAGGAGAGCGAGTAGAGACACCTTCGTCAACATACAGGCCAGCAATAGCTACGTCAATATAACTTGATTGTGATAGTACTTCCTGGGATTCAAAAACAACCCAAAATGTCCACGGTGTTTCCCATAAGACCCCATGTTCACCAAACGCTGCTGCATTCAAATGGTATAAAAAATAATGTTCACCTTTGTTGCTTGGAATATCGCTAATTAATGGAGGAGGGAGTGGCATAGATGAAGGATACATTGCCCTCGTGCCGAATTCTTGG]

[-] EMBL CD079259             [CTAGTATATTTGTGAACTAAAGAAGTACAGAAATAAGTTAGGTAGTTTAATCTGTTTAAAAAGTAGGAATAATCATTTCATACCATGTGGTATATCTGGAGAAATTACAGTAAATACAAGTCAGATTTTTACCCGTATCATACTAGTTCAGATGAAAACGCCAATGATCATAAACAGCACAACCCCGAGTGACAGTAACCCAAGGTGGTAATCTTGACAAAAAGTCTGAGAGTGGAGGAGAGCGAGTAGAGACACCTTCGTCAACATACAGGCCAGCAATAGCTACGTCAATATAACTTGATTGTGATAGTACTTCCTGGGATTCAAAAACAACCCAAAATGTCCACGGTGTTTCCCATAAGACCCCATGTTCACCAAACGCTGCTGCATTCAAATGGTATAAAAAATAATGTTCACCTTTGTTGCTTGGAATATCGCTAATTAATGGAGGAGGGAGTGGCATAGATGAAGGATACATTGCCCTCGTGCCGAATTCTTGG]




>consensus_10540#3
CTAGTATATTTGTGAACTAAAGAAGTACAGAAATAAGTTAGGTAGTTTAATCTGTTTAAA
AAGTAGGAATAATCATTTCATACCATGTGGTATATCTGGAGAAATTACAGTAAATACAAG
TCAGATTTTTACCCGTATCATACTAGTTCAGATGAAAACGCCAATGATCATAAACAGCAC
AACCCCGAGTGACAGTAACCCAAGGTGGTAATCTTGACAAAAAGTCTGAGAGTGGAGGAG
AGCGAGTAGAGACACCTTCGTCAACATACAGGCCAGCAATAGCTACGTCAATATAACTTG
ATTGTGATAGTACTTCCTGGGATTCAAAAACAACCCAAAATGTCCACGGTGTTTCCCATA
AGACCCCATGTTCACCAAACGCTGCTGCATTCAAATGGTATAAAAAATAATGTTCACCTT
TGTTGCTTGGAATATCGCTAATTAATGGAGGAGGGAGTGGCATAGATGAAGGATACATTG
CCCTCGTGCCGAATTCTTGG

consensusID : consensus_10540#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 476
fasta sequence

                              [CAATGCAAGCAAAAATTATGGCACAGAGGTCCATTAATTTTTAATTACTGGCCAGCTTGGTTTCTGAGGAGTACATAAACTTGTTCTTTGATCCAGTTTTTATGATGTGGAACATATGTGTATGTAGATTCATGAAAAACTAGACAACTAAGGTCAGCCAACTGATCGATGAACTGGAAAAGTTGGGATATGTCATAAGTGATAGTAGGAGCATTAGGTTTTTCACGTTTTAGCTGCTCTTCATATATCTTGCATACACCCTCCAAACATTGCTCTACAGTTTCATAATCCGACCATGTACGAGTATCTGGTTTTTTGACAGAAGGCTGTACAAGTAATATTGTGTGAGGCATCTTGAAACCACTAGCACCAGGACTCCCGGNGGCTGTATCGTAATGACAGCTAACAAGAAATGCTAATTTGCTCTCGTTACCACCTTTGGCACGTAGGTCATGAAAACGAAGAGCAAAGTTCCG]

[+] EMBL CD136939             [CAATGCAAGCAAAAATTATGGCACAGAGGTCCATTAATTTTTAATTACTGGCCAGCTTGGTTTCTGAGGAGTACATAAACTTGTTCTTTGATCCAGTTTTTATGATGTGGAACATATGTGTATGTAGATTCATGAAAAACTAGACAACTAAGGTCAGCCAACTGATCGATGAACTGGAAAAGTTGGGATATGTCATAAGTGATAGTAGGAGCATTAGGTTTTTCACGTTTTAGCTGCTCTTCATATATCTTGCATACACCCTCCAAACATTGCTCTACAGTTTCATAATCCGACCATGTACGAGTATCTGGTTTTTTGACAGAAGGCTGTACAAGTAATATTGTGTGAGGCATCTTGAAACCACTAGCACCAGGACTCCCGGNGGCTGTATCGTAATGACAGCTAACAAGAAATGCTAATTTGCTCTCGTTACCACCTTTGGCACGTAGGTCATGAAAACGAAGAGCAAAGTTCCG]
[+] EMBL CD136903             [CAATGCAAGCAAAAATTATGGCACAGAGGTCCATTAATTTTTAATTACTGGCCAGCTTGGTTTCTGAGGAGTACATAAACTTGTTCTTTGATCCAGTTTTTATGATGTGGAACATATGTGTATGTAGATTCATGAAAAACTAGACAACTAAGGTCAGCCAACTGATCGATGAACTGGAAAAGTTGGGATATGTCATAAGTGATAGTAGGAGCATTAGGTTTTTCACGTTTTAGCTGCTCTTCATATATCTTGCATACACCCTCCAAACATTGCCCTACAGTTTCATAATCCGACCATGTACGAGTATCTGGTTTTTTGACAGAAGGCTGTACAAGTAATATTGTGTGAGGCATCT                                                                                                                         ]




>consensus_10540#4
CAATGCAAGCAAAAATTATGGCACAGAGGTCCATTAATTTTTAATTACTGGCCAGCTTGG
TTTCTGAGGAGTACATAAACTTGTTCTTTGATCCAGTTTTTATGATGTGGAACATATGTG
TATGTAGATTCATGAAAAACTAGACAACTAAGGTCAGCCAACTGATCGATGAACTGGAAA
AGTTGGGATATGTCATAAGTGATAGTAGGAGCATTAGGTTTTTCACGTTTTAGCTGCTCT
TCATATATCTTGCATACACCCTCCAAACATTGCTCTACAGTTTCATAATCCGACCATGTA
CGAGTATCTGGTTTTTTGACAGAAGGCTGTACAAGTAATATTGTGTGAGGCATCTTGAAA
CCACTAGCACCAGGACTCCCGGNGGCTGTATCGTAATGACAGCTAACAAGAAATGCTAAT
TTGCTCTCGTTACCACCTTTGGCACGTAGGTCATGAAAACGAAGAGCAAAGTTCCG

consensusID : consensus_10540#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 444
fasta sequence

                              [CCAAACTCTGACAACAGAGAATGTAACGTTCC-----AA---CTC--AAGCG-ACCATTTGGTAAGTAATTCATTAACAATGTGCGTGACAGTAACTTTAACTTTACATTTGGTTCTATTTTGTGAAATTCAGCAGGAACACGATAAAAATATCTGGGGATATGAAGAAAAGGATAAACAGAGGCTACACCACAATAAGGTTGACTGTAATTGCACCCCGCGGGTTCTGCATCAACAAGCTCTTTGATACCTTTGAATTTTGACTGATTATGCTCGTTTGAATTCATAAATAATCTAAGTGCGGACATAGGGTAAGAATTAGGTGTCAGATACCGAATACCATTCGCATCAATAGGGACAATTAGGATATGACTTTCTTCCTCTGTGATCTCAGGAGAATCTGGGATATGCCGAAGATATCTGTTGGTATGGAAAACCCTCGTGCCGATCGTGGC]

[+] EMBL CD152900             [CCAAACTCTGAC ACAGAG ATGTAACGTTCC     AA   CTC  AAGCG ACCATTTGGTAAGTAATTCATTAACAATGTGCGTGACAGTAACTTTAATTTTACATTTGGTTCTATTTTGTGAAATTCAGCAGGAACACTATAAAAATATCTGGGGATATGAAGAAAAGGATAAACATATGTTACACCACAATAAGGTTGACTGTAATTGCACCCCGCGGGTTCTGCATCCACAAACTCTTTGATACCTTTGAATTTTGACTGATTATGCTCGTTTGAATTCATAAATAATCTAAGTGCGGACATAGGGTAAGAATTAGGTGTCAGATACCGAATACCATTCGCATCAATAGGGACAATTAGGATAT                                                                                     ]
[+] EMBL CD152884             [     ccaTGCCAACAGAGAATGTAACGTTCC     AA   CTC  AAGCG ACCATTTGGTAAGTAATTNATTAACAATGTGCGTGACAGTAACTTTAACTTTACATTTGGTTCTATTTTGTGAGATTCAGCAGGAACACGATTTAAATATCTGGGGATATGAAGAAAAGGATAAACAGAGGCTACACCACAATAAGGTTGACTGTAATTGCACCCCGCGGGTTCTGCATCAACACGCTCTTTGATACCTTTGAATTTTGACTGATTATGCTCGTTTGAATTCATAAATAATCTAAGAGCGGACATAGGGTAAGAATTAGGTGTCAGATACCGAATACCATTCGCATCAATAGGGACAATTAGGATAT                                                                                     ]
[-] EMBL CD083944             [        aaACTACAGAGAATGTAACGTTCCTGCTGAATTTCACAAAATAGAACCATTTGGTAAGTAATTCATTAACAATGTGCGTGACAGTAACTTTAACTTTACATTTGGTTCTATTTTGTGAAATTCAGCAGGAACACGATAAAAATATCTGGGGATATGAAGAAAAGGATAAACAGAGGCTACACCACAATAAGGTTGACTGTAATTGCACCCCGCGGGTTCTGCATCAACAAGCTCTTTGATACCTTTGAATTTTGACTGATTATGCTCGTTTGAATTCATAAATAATCTAAGTGCGGACATAGGGTAAGAATTAGGTGTCAGATACCGAATACCATTCGCATCAATAGGGACAATTAGGATATGACTTTCTTCCTCTGTGATCTCAGGAGAATCTGGGATATGCCGAAGATATCTGTTGGTATGGAAAACCCTCGTGCCGATCGTGGC]




>consensus_10540#5
CCAAACTCTGACAACAGAGAATGTAACGTTCCAACTCAAGCGACCATTTGGTAAGTAATT
CATTAACAATGTGCGTGACAGTAACTTTAACTTTACATTTGGTTCTATTTTGTGAAATTC
AGCAGGAACACGATAAAAATATCTGGGGATATGAAGAAAAGGATAAACAGAGGCTACACC
ACAATAAGGTTGACTGTAATTGCACCCCGCGGGTTCTGCATCAACAAGCTCTTTGATACC
TTTGAATTTTGACTGATTATGCTCGTTTGAATTCATAAATAATCTAAGTGCGGACATAGG
GTAAGAATTAGGTGTCAGATACCGAATACCATTCGCATCAATAGGGACAATTAGGATATG
ACTTTCTTCCTCTGTGATCTCAGGAGAATCTGGGATATGCCGAAGATATCTGTTGGTATG
GAAAACCCTCGTGCCGATCGTGGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10540#2      ------------------------------------------------------------
consensus_10540#3      ------------------------------------------------------------
consensus_10540#0      AAACATATATTTCATATAGATATTACAATGCAAGCAAAAATTATGGCACAGAGGTCCATT 60
consensus_10540#4      ------------------------------------------------------------
consensus_10540#1      ------------------------------------------------------------
consensus_10540#5      ------------------------------------------------------------
                                                                                   

consensus_10540#2      ------------------------------------------------------------
consensus_10540#3      ------------------------------------------------------------
consensus_10540#0      AATTTTTAATTACTGGCCAGCTTGGTTTCTGAGGAGTACATAAACTTGTTCTTTGATCCA 120
consensus_10540#4      ------------------------------------------------------------
consensus_10540#1      ------------------------------------------------------------
consensus_10540#5      ------------------------------------------------------------
                                                                                   

consensus_10540#2      ------------------------------------------------------------
consensus_10540#3      ------------------------------------------------------------
consensus_10540#0      GTTTTTATGATGTGGAACATATGTGTATGTAGATTCATGAAAAACTAGACAACTAAGGTC 180
consensus_10540#4      ------------------------------------------------------------
consensus_10540#1      ------------------------------------------------------------
consensus_10540#5      ------------------------------------------------------------
                                                                                   

consensus_10540#2      ------------------------------------------------------------
consensus_10540#3      ------------------------------------------------------------
consensus_10540#0      AGCCAACTGATCGATGAACTGGAAAAGTTGGGATATGTCATAAGTGATAGTAGGAGCATT 240
consensus_10540#4      ------------------------------------------------------------
consensus_10540#1      ------------------------------------------------------------
consensus_10540#5      ------------------------------------------------------------
                                                                                   

consensus_10540#2      ------------------------------------------------------------
consensus_10540#3      ------------------------------------------------------------
consensus_10540#0      AGGTTTTTCACGTTTTAACTGCTCTTCATATATCTTGCATACACCCTCCAAACATTGCTC 300
consensus_10540#4      ------------------------------------------------------------
consensus_10540#1      ------------------------------------------------------------
consensus_10540#5      ------------------------------------------------------------
                                                                                   

consensus_10540#2      ------------------------------------------------------------
consensus_10540#3      ------------------------------------------------------------
consensus_10540#0      TACAGTTTCATAATCCGACCATGTACGAATATCTGGTTTTTTGACAGAAGGCTGTACAAG 360
consensus_10540#4      ------------------------------------------------------------
consensus_10540#1      ------------------------------------------------------------
consensus_10540#5      ------------------------------------------------------------
                                                                                   

consensus_10540#2      ------------------------------------------------------------
consensus_10540#3      ------------------------------------------------------------
consensus_10540#0      TAATATTGTGTGAGGCATCTTGAAACCTAAAGGAAAATAAAGTGGTTAACAAATTTCCTT 420
consensus_10540#4      ------------------------------------------------------------
consensus_10540#1      ------------------------------------------------------------
consensus_10540#5      ------------------------------------------------------------
                                                                                   

consensus_10540#2      ------------------------------------------------------------
consensus_10540#3      ------------------------------------CTAGTATATTTGTGAACTAAAGAA 24
consensus_10540#0      TCTAAAGGAGAAGTGAAAAGTTCAGTAAAGTTTTTACTAGTATATTTGTGAACTAAAGAA 480
consensus_10540#4      ------------------------------------------------------------
consensus_10540#1      ------------------------------------------------------------
consensus_10540#5      ------------------------------------------------------------
                                                                                   

consensus_10540#2      ------------------------------------------------------------
consensus_10540#3      GTACAGAAATAAGTTAGGTAGTTTAATCTGTTTAAAAAGTAGGAATAATCATTTCATACC 84
consensus_10540#0      GTACAGAAATAAGTTAGGTAGTTTAATCTGTTTAAAAAGTAGGAATAATCATTTCATACC 540
consensus_10540#4      ------------------------------------------------------------
consensus_10540#1      --------------------------ACGAATTAAGATATGNNNNNNNNNNNNNNNNNAA 34
consensus_10540#5      -------------------------------------------------CCAAACTCTGA 11
                                                                                   

consensus_10540#2      ----------------------------------------------------------AA 2
consensus_10540#3      ATGTGGTATATCTGGAGAAATTACAGTAAATACAAGTCAGATTTTTACCCGTA-TCATAC 143
consensus_10540#0      ATGTGGTATATCTGGAGAAATTACAGTAAATACAAGTCAGATTTTTACCCGTA-TCATAC 599
consensus_10540#4      ---CAATGCAAGCAAAAATTATGGCACAGAGGTCCATTAATTTTTAATTACTGGCCAGCT 57
consensus_10540#1      CTACAGAGAATGTAACGTTCCAACTCAAGCGACCATTTGGTAAGTAATTCATT---AACA 91
consensus_10540#5      CAACAGAGAATGTAACGTTCCAACTCAAGCGACCATTTGGTAAGTAATTCATT---AACA 68
                                                                                   

consensus_10540#2      AGTTTCAAGATAAAAACGCCAATGATCATAAACAGCACAACCCCGAGTGACA-----GTA 57
consensus_10540#3      TAGTTCA-GATGAAAACGCCAATGATCATAAACAGCACAACCCCGAGTGACA-----GTA 197
consensus_10540#0      TAGTTCA-GATGAAAACGCCAATGATCATAAACAGCACAACCCCGAGTGACA-----GTA 653
consensus_10540#4      TGGTTTCTGAGGAGTACATAAAC--TTGTTCTTTGATCCAGTTTTTATGATGT----GGA 111
consensus_10540#1      ATGTGCGTGACAGTAACTTTAACT-TTACATTTGGTTCTATTTTGTGAAATTCAGCAGGA 150
consensus_10540#5      ATGTGCGTGACAGTAACTTTAACT-TTACATTTGGTTCTATTTTGTGAAATTCAGCAGGA 127
                          *    **     **   **   *        *  * *         *       * *

consensus_10540#2      ACCC---AAG-GTGGTAATCTTGACAAAAAGTCTGAGAGTGGAGGAGAACG--------- 104
consensus_10540#3      ACCC---AAG-GTGGTAATCTTGACAAAAAGTCTGAGAGTGGAGGAGAGCG--------- 244
consensus_10540#0      ACCC---AAG-GTGGTAATCTTGACAAAAAGTCTGAGAGTGGAGGAGAGCG--------- 700
consensus_10540#4      ACAT---ATGTGTATGTAGATTCATGAAAAACTAGACAACTAAGGTCAGCC--------- 159
consensus_10540#1      ACACGATAAAAATATCTGGGGATATGAAGAAAAGGATAAACAGAGGCTAC---------- 200
consensus_10540#5      ACACGATAAAAATATCTGGGGATATGAAGAAAAGGATAAACAGAGGCTACACCACAATAA 187
                       **     *    *          *  ** *    ** *      *    *          

consensus_10540#2      AGTAGA--GACACCTTCGTCAACATACAGGCCAGCAATAGCTACGTCAATATAACTTGAT 162
consensus_10540#3      AGTAGA--GACACCTTCGTCAACATACAGGCCAGCAATAGCTACGTCAATATAACTTGAT 302
consensus_10540#0      AGTAGA--GACACCTTCGTCAACATACAGGCCAGCAATAGCTACGTCAATATAACTTGAT 758
consensus_10540#4      AACTGATCGATGAACTGGAAAAGTTGGGATATGTCATAAGTGATAGTAGGAGCATTAGGT 219
consensus_10540#1      ------------------CCCGCGGGTTCTGCATCAACAAGCTCTTTGATACCTTTGAAT 242
consensus_10540#5      GGTTGACTGTAATTGCACCCCGCGGGTTCTGCATCAACAAGCTCTTTGATACCTTTGAAT 247
                                                         **  *           *    *   *

consensus_10540#2      TGTGATAG----TACTTCCTGGGATTCAAAAACAACCCAAAATGTCCACGGTGTTTCCCA 218
consensus_10540#3      TGTGATAG----TACTTCCTGGGATTCAAAAACAACCCAAAATGTCCACGGTGTTTCCCA 358
consensus_10540#0      TGTGATAG----TACTTCCTGGGATTCAAAAACAACCCAAAATGTCCACGGTGTTTCCCA 814
consensus_10540#4      TTTTCACG----TTTTAGCTGCTCTTCATATATCTTGCATACACCCTCCAAACATTGCTC 275
consensus_10540#1      TTTGACTGATTATGCTCGTTTGAATTCATAAATAATCTAAGTGCGGACATAGGGTAAGAA 302
consensus_10540#5      TTTGACTGATTATGCTCGTTTGAATTCATAAATAATCTAAGTGCGGACATAGGGTAAGAA 307
                       * *    *    *  *   *    **** * *      *               *     

consensus_10540#2      TAAGACCCCATGTTCACCA---AACGCTGCTGCATTCAAATGGTATAAAAAATAATGTTC 275
consensus_10540#3      TAAGACCCCATGTTCACCA---AACGCTGCTGCATTCAAATGGTATAAAAAATAATGTTC 415
consensus_10540#0      TAAGACCCCATGTTCACCA---AACGCTGCTGCATTCAAATGGTATAAAAAATAATGTTC 871
consensus_10540#4      TACAGTTTCATAATCCGAC---CATGTACGAGTATCTGGTTTTTTGACAGAAGGCTGTAC 332
consensus_10540#1      TTAGGTGTCAGATACCGAATACCATTCGCATNNNNNNNNNNNNNNNAGGATATGACTTTC 362
consensus_10540#5      TTAGGTGTCAGATACCGAATACCATTCGCATCAATAGGGACAATTA-GGATATGACTTTC 366
                       *       **    *        *                           *     * *

consensus_10540#2      ACCTT-TGTTGCTT--GGAATATCGCTAATTAATGGAGGAGGGAGTGGCATAGATGA--- 329
consensus_10540#3      ACCTT-TGTTGCTT--GGAATATCGCTAATTAATGGAGGAGGGAGTGGCATAGATGA--- 469
consensus_10540#0      ACCTT-TGTTGCTT--GGAATATCGCTAATTAATGGAGGAGGGAGTGGCATAGATGA--- 925
consensus_10540#4      AAGTAATATTGTGT--GAGGCATCTTGAAACCACTA-----GCACCAGGACTCCCGG--- 382
consensus_10540#1      TTCCTCTGTGATCTCAGGAGAATCTGGGATATGCCGAAGATATCTTGGGCTGACAAGAGG 422
consensus_10540#5      TTCCTCTGTGATCTCAGGAGAATCTGGGATATGCCGAAGATATCT---GTTGGTATG--- 420
                             * *    *  *    ***    *                               

consensus_10540#2      ----AGGATACATTGCAGTCGATGCAAACGACCATGCAGTTAACTTGGTATAGTTCTCAT 385
consensus_10540#3      ----AGGATACATTGCCCTCGTGCCGAATTCTTGG------------------------- 500
consensus_10540#0      ----AGGATACATTGCAGTCGATGCAAACGACCATGCAGTTAACTTGGTATAGTTCTCAT 981
consensus_10540#4      ----NGGCTGTATCGTAATGACAGCTAACAA--GAAATGCTAATTTGCTCTCGTTACCAC 436
consensus_10540#1      GTCTGAAAAATTTGGAGACGGCTGGATGCTGTATGGAAAGCCGTAATTCGATGCATGAAT 482
consensus_10540#5      ----GAAAACCCTCGTGCCGATCGTG-GC------------------------------- 444
                                   * *                                             

consensus_10540#2      CTGTACGAATTAAGATATGAGTATGGGGAGGACCGGAAACTACAGAGAATGTAACGTTCC 445
consensus_10540#3      ------------------------------------------------------------
consensus_10540#0      CTGTACGAATTAAGATATGAGTATGGGGAGGACCGGAAACTACAGAGAATGTAACGTTCC 1041
consensus_10540#4      CTTTGGCACGTAGGTCATGAAAACGAAGAGCAAAGTTCCG-------------------- 476
consensus_10540#1      AAGGATTGTATACGACAAGCAAGCATTTAGCAACATCAAGGAAAGATATTTACTCCCAGT 542
consensus_10540#5      ------------------------------------------------------------
                                                                                   

consensus_10540#2      AACTCAAGCGACCATTTGGTAAGTAATTCATTAACAATGTGCGCCTCGTGCCGAATTNAT 505
consensus_10540#3      ------------------------------------------------------------
consensus_10540#0      AACTCAAGCGACCATTTGGTAAGTAATTCATTAACAATGTGCGTGACAGTAACTTTAACT 1101
consensus_10540#4      ------------------------------------------------------------
consensus_10540#1      TCTTGAGGTGCATTGTAGCCGTCCTTGGTGAGCCGATGAATTGTCATCTTGTAAAGTCTT 602
consensus_10540#5      ------------------------------------------------------------
                                                                                   

consensus_10540#2      GGCCTCGN---------------------------------------------------- 513
consensus_10540#3      ------------------------------------------------------------
consensus_10540#0      TTACATTTGGTTNTATTTTGTGAAATTNAGNAGGAACACGATAAAAATATCTGGGGATAT 1161
consensus_10540#4      ------------------------------------------------------------
consensus_10540#1      CGCCTTCCTCTGTCGAACACCACTCATTAACCTCGTGCCGAATTNTGGCCCTCGAG---- 658
consensus_10540#5      ------------------------------------------------------------
                                                                                   

consensus_10540#2      ------------------------------------------------------------
consensus_10540#3      ------------------------------------------------------------
consensus_10540#0      GAAGAATAGGATAAACAGATGCTACACCACAATAAGGTTGACTGTAATTGCACCCCGCGG 1221
consensus_10540#4      ------------------------------------------------------------
consensus_10540#1      ------------------------------------------------------------
consensus_10540#5      ------------------------------------------------------------
                                                                                   

consensus_10540#2      ------------------------------------------------------------
consensus_10540#3      ------------------------------------------------------------
consensus_10540#0      GTTCTGCATCCCCCCGCTCTTTGATACCTTTGGATTTTGACTGATTATGCTCGTTTGAAT 1281
consensus_10540#4      ------------------------------------------------------------
consensus_10540#1      ------------------------------------------------------------
consensus_10540#5      ------------------------------------------------------------
                                                                                   

consensus_10540#2      ------------------------------------------------------------
consensus_10540#3      ------------------------------------------------------------
consensus_10540#0      TCTTCTCTCCTCTAAGTGCGGACATAGGGTGTGAATTAGGTGTCNGCTTCCGGTTACCGT 1341
consensus_10540#4      ------------------------------------------------------------
consensus_10540#1      ------------------------------------------------------------
consensus_10540#5      ------------------------------------------------------------
                                                                                   

consensus_10540#2      ---------------------------
consensus_10540#3      ---------------------------
consensus_10540#0      TCGCTTCNTTTGGGTCCCTCTGGATAT 1368
consensus_10540#4      ---------------------------
consensus_10540#1      ---------------------------
consensus_10540#5      ---------------------------