These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10542#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 682 fasta sequence [ATAGATGAAAAAAAGAAAGATCGTTTTGGAAATATTTCCTTAAATGATTTCTTTTCAGAAACCGATGATGATGATGAGGAGGAGGAGGAGGAGAAGAACGAAAAAGAAATGGATGAATTAATTGATGAAAGACAAGAAGGAAATAAAAAAGCTAAACGTACATTGTCATCATTCTATGGGAGTGAAAATACTTCCA-GCGATGGTGATGACAACGGCGAGTATACCAGCGATGAGGATCAATTTGAAAAGAATGAAGAAGCTATCTATAAAGATGATGATTATGATAATGGATCAGATTCTGATTTTGACATAGAATACTTACTTCGATCGAAACAACAATTGTCTACAGTACAAAATCATAATAATAAAGA-ACAATCATCCAGTTCATCTAATTTGTCCGAATCTCAATCATCATCATTATTACCAACCGGTGTCCCCGCCCCCGCTACCATTACTACTCTTAATGACACCATTACTTCCGAGTCATTGAAAG-AAGATTCATTCACTGGAGAAAAGTTTATCCATGATATTAATGAA-TTACAGACTTCAATG-AAACAAGATTTGAACAGTTGGCTAAACGCTCAATCATCATCATCATCGTCTAATGTATCTGTTTATGATGCTGTGATAGAAGAGGATATTGAAAAACTTATTGAACAATCACTAGTAAATACAAGTGATT] [+] EMBL CD201907 [ATAGATGAAAAAAAGAAAGATCGTTTTGGAAATATTTCCTTAAATGATTTCTTTTCAGAAACCGATGATGATGATGAGGAGGAGGAGGAGGAGAAGAACGAAAAAGAAATGGATGAATTAATTGATGAAAGACAAGAAGGAAATAAAAAAGCTAAACGTACATTGTCATCATTCTATGGGAGTGAAAATACTTCCA GCGATGGTGATGACAACGGCGAGTATACCAGCGATGAGGATCAATTTGAAAAGAATGAAGAAGCTATCTATAAAGATGATGATTATGATAATGAATCAGATTCTGATTTTGACATAGAATACTTACTTCGATCGAAACAACAATTGTCTACAGTACAAAATCATAATAATAAAGA ACAATCATCCAGTTCATCTAATTTGTCCGAATCTCAATCATCATCATT ] [+] EMBL CD201918 [ATAGATGAAAAAAAGAAAGATCGTTTTGGAAATATTTCCTTAAATGATTTCTTTTCAGAAACCGATGATGATGATGAGGAGGAGGAGGAGGAGAAGAACGAAAAAGAAATGGATGAATTAATTGATGAAAGACAAGAAGGAAATGAAAAAGCTAAACGTACATTGTCATCATTCTATGGGAGTGAAAATACTTCCA GCGATGGTGATGACAACGGCGAGTATACCAGCGATGAGGATCAATTTGAAAAGAATGAAGAAGCTATCTATAAAGATGATGATTATGATAATGAATCAGATTCTGATTTTGACATAGAATACTTACTTCGATCGAAACAACAATTGTCTACAGTACAAAATCATAATAATAAAGA ACAATCATCCAGTTCATCTAATTTGTCCGAATCTCAATCATCATCATT ] [+] EMBL CD201942 [ATAGATGAAAAAAACAAAGATCGTTTTGGAAATATTTCCTTAAATGATTTCTTTTCAGAAACCGATGATGATGATGAGGAGGAGGAGGAGGAGAAGAACGAAAAAGAAATGGATGAGTTAATT ] [-] EMBL CD202106 [ TAGATGAAAAAAAGAAAGATCGTTTTGGAAATATTTCCTTAAATGATTTCTTTTCAGAAACCGATGATGATGATGAGGAGGAGGAGGAGGAGAAGAACGAAAAAGAAATGGATGAATTAATTGATGAAAGACAAGAAGGAAATAAAAAAGCTAAACGTACATTGTCATCATTCTATGGGAGTGAAAATACTCCCA GCGATGGTGATGACAACGGCGAGTATACCAGCGATGAGGATCAATTTGAAAAGAATGAAGAAGCTATCTATAAAGATGATGATTATGATAATGAATCAGATTCTGATTTTGACATAGAATACTTACTTCGATCGAAACAACAATTGTCTACAGTACAAAATCATAATAATAAAGA ACAATCATCCAGTTCATCTAATTTGTCCGAATCTCAATCATCATCATTA ] [-] EMBL CD202070 [ TAGATGAAAAAAAGAAAGATCGTTTTGGAAATATTTCCTTAAATGATTTCTTTTCAGTAACCGATGATGATGATGAGGAGGAGGAGGAGGAGAAGAACGAAAAAGAAATGGATGAATTAATTGATGAAAGACAAGAAGGAAATAAAAAAGCTAAACGTACATTGTCATCATTCTATGGGAGTGAATAT CACCCAGGAGACAGTTATGACAACGGCGAGTATACCAGCGATGAGGATCAATTTGAAAAGAATGAAGAAGCTATCTATAGAGATGATGATTATGATAATGAATCAGATTCTGATTTTGACATAGAATACTTACTTCGATCGAAGCAACAATTGTCTACAGTGCAAAATCATAATAATAAAGA ACAATCATCCAGTTCATGTAATTTGTCCGAATCTCAATCATCATCATTA ] [+] EMBL CD198836 [ CAATTTGAAAAGAATGAAGAAGCTATCTATAAAGATGATGATTATGATAATGGATCAGATTCTGATTTTGACATAGAATACTTACTTCGATCGAAACAACAATTGTCTACAGTACAAAATCATAATAATAAAGA ACAATCATCCAGTTCATCTAATTTGTCCGAATCTCAATCATCATCATTATTACCAACCGGTGTCCCCGCCCCCGCTACCATTACTACTCTTAATGACACCATTACTTCCGAGTCATTGAAAG AAGATTCATTCACTGGAGAAAAGTTTATCCATGATATTAATGAA TTACAGACTTCAATG AAACAAGATTTGAACAGTTGGCTAAACGCTCAATCATCATCATCATCGTCTAATGTATCTGTTTA ] [+] EMBL CD198911 [ CAATTTGAAAAGAATGAAGAAGCTATCTATAAAGATGATGATTATGATAATGGATCAGATTCTGATTTTGACATAGAATACTTACTTCGATCGAAACAACAATTGTCTACAGTACAAAATCATAATAATAAAGA ACAATCATCCAGTTCATCTAATTTGTCCGAATCTCAATCATCATCATTATTACCAACCGGTGTCCCCGCCCCCGCTACCATTACTACTCTTAATGACACCATTACTTCCGAGTCATTGAAAG AAGATTCATTCACTGGAGAANAGTTTATCCATGATATTAATGAA TTACAGACTTCGATG ANACAAGATTTGAACAGTTGGCTAAACGCTCAATCATCATCA ] [+] EMBL CD198975 [ CAATTTGAAAAGAATGAAGAAGCTATCTATAAAGATGATGATTATGATAATGGATCAGATTCTGATTTTGACATAGAATACTTACTTCGATCGAAACAACAATTGTCTACAGTACAAAATCATAATAATAAAGA ACAATCATCCAGTTCATCTAATTTGTCCGAATCTCAATCATCATCATTATTACCAACCGGTGTCCCCGCCCCCGCTACCATTACTACTCTTAATGACACCATTACTTCCGAGTCATTGAAAG AAGATTCATTCACTGGAGAAAAGTTTATCCATGATATTAATGAATTTACAGACTTC ATG ANACAAGATTTGAACAGNTGGCTAAACGCTCAATCATCATC ] [+] EMBL CD199175 [ CAATTTGAAAAGAATGAAGAAGCTATCTATAAAGATGATGATTATGATAATGGATCAGATTCTGATTTTGACATAGAATACTTACTTCGATCGAAACAACAATTGTCTACAGTACAAAATCATAATAATAAAGA ACAATCATCCAGTTCATCTAATTTGTCCGAATCTCAATCATCATCATTATTACCAACCGGTGTCCCCGCCCCCGCTACCATTACTACTCTTAATGACACCATTACTTCCGAGTCATTGAAAG AAGATTCATTCACTGGAGAAAAGTTTATCCATGATATTAATGAA TTACAGACTTCAATGNNAACAga ] [+] EMBL CD199129 [ CAATTTGAAAAGAATGAAGAAGCTATCTATAAAGATGATGATTATGATAATGGATCAGATTCTGATTTTGACATAGAATACTTACTTCGATCGAAACAACAATTGTCTACAGTACAAAATCATAATAATAAAGA ACAATCATCCAGTTCATCTAATTTGTCCGAATCTCAATCATCATCATTATTACCAACCGGTGTCCCCGCCCCCGCTACCATTACTACTCTTAATGACACCATTACTTCCGAGTCATTGAAAG AAGATTCATTCACTGGAGAAAAGTTTATCCATGATATTAATGAA TTA ] [+] EMBL CD198839 [ CAATTTGAAAAGAATGAAGAAGCTATCTATAAAGATGATGATTATGATAATGGATCAGATTCTGATTTTGACATAGAATACTTACTTCGATCGAAACAACAATTGTCTACAGTACAAAATCATAATAATAAAGA ACAATCATCCAGTTCATCTAATTTGTCCGAATCTCAATCATCATCATTATTACCAACCGGTGTCCCCGCCCCCGCTACCATTACTACTCTTAATGACACCATTACTTCCGAGTCATTGAAAG AAGATTCATTCACTGGAGAAAAGTTTATCCATGATATTAATGAA TTACAGACTTCAATG AAACAAGATTTGAACAGTTGGCTAAACGCTCAATCATCATCATCATCGTCTAATGTATCTGTTTATGATGCTGTG ] [-] EMBL CD198939 [ CATAATAAT AAGACNNNATCATCCAGTTCATCTAATTTGTCCGAATCTCAATCATCATCATTATTACCAACCGGTGTCCCCGCCCCCGCTACCATTACTACTCTTAATGACACCATTACTTCCGAGTCATTGAAAG AAGATTCATTCACTGGAGAAAAGTTTATCCATGATATTAATGAA TTACAGACTTCAATG AAACAAGATTTGAACAGTTGGCTAAACGCTCAATCATCATCATCATCGTCTAATGTATCTGTTTATGATGCTGTGATAGAAGAGGATATTGAAAAACTTATTGAACAATCACTAGTAAATACAAGTGATT] [-] EMBL CD198888 [ AATAAAGA CCAATCATCCAGTTCATCTAATTTGTCCGAATCTCAATCATCATCATTATTACCAACCGGTGTCCNCGCCCCCGCTACCATTACTACTCTTAATGACACCATTACTTCCGAGTCATTGAAAG AAGATTCATTCACTGGAGAAAAGTTTATCCATGATATTAATGAA TTACAGACTTCAATG AAACAAGATTTGAACAGTTGGCTAAACGCTCAATCATCATCATCATCGTCTAATGTATCTGTTTATGATGCTGTGATAGAAGAGGATATTGAAGAACTTATTGAACAATCACTAGTAAATACAAGTGATT] [-] EMBL CD199069 [ ggGA NCAATCATCCAGTTCATCTAATTTGTCCGAATCTCAATCATCATCATTATTACCAACCGGTGTCCCCGCCCCCGCTACCATTACTACTCTTAATGACACCATTACTTCCGAGTCATTGAAAG AAGATTCATTCACTGGAGAAAAGTTTATCCATGATATTAATGAA TTACAGACTTCAATG AAACAAGATTTGAACAGTTGGCTAAACGCTCAATCTTCATCATCATCGTCTAATGTATCTGTTTATGATGCTGTGATAGAAGAGGATATTGAAAAACTTATTGAACAATCACTAGTAAATACAAGTGATT] [-] EMBL CD198980 [ AATCATCCAGTTCATCTAATTGTTCCGAATCTCAATCATCATCATTATTACCAACCGGTGTCCCCGCCCCCGCTACCATTACTACTCTTAATGACACCATTACTTCCGAGTCATTGAAAG AAGATTCATTCACTGGAGAAGAGTTTATCCATGATATTAATGAA TTACAGACTTCAATG AAACAAGATTTGAACAGTTGGCTAAACGCTCAATCATCATCATCATCGTCTAATGTATCTGTTTATGATGCTGTGATAGAAGAGGATATTGAAAAACTTATTGAACAATCACTAGTAAATACAAGTGATT] [-] EMBL CD199110 [ CCCCGCTACCATTACTACTCTTAATGACACCATTAC TCCGAGTCATTGAAAGNAAGATTCATTCACTGGAGAAAAGTTTATCCATGATATTAATGAA TTACAGACTTCAATG GAACAAGATTTGAACAGTTTGCTAAACGCTCAATCATCATCATCATCGTCTAATGTATCTGTTTATGATGCTGTGATAGAAGAGGATATTGAAAAACTTATTGAACAATCACTAGTAAATACAAGTGATT] [-] EMBL CD199096 [ CTCTTAATGACACCATTACTCNCGAGTCA TGAAGA AAGATTCATTCACTGGAGAAAAGTTTATCCATGATATTAATGAA TTACAGACTTCAATG AAACAAGATTTGAACAGTTGGCTAAACGCTCAATCATCATCATCATCGTCTAATGTATCTGTTTATGATGCTGTGATAGAAGAGGATATTGAAAAACTTATTGAACAATCACTAGTAAATACAAGTGATT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||