cluster # 10552

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Schistosoma mansoni
cluster # 10552 cluster # 10552 Sequences # 18 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10552#0 length = 1341 sequences # 11
consensus_10552#1 length = 911 sequences # 5

consensus_10552#2 length = 262 sequences # 1
consensus_10552#3 length = 139 sequences # 1

consensusID : consensus_10552#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1341
fasta sequence

                              [AAAGAAGTGGTTGGACGACTATTTAAAGAAAAAATTGTATGGCCGTTTACAAAACCAGTCGATCACCAGCGGCTGAACCTCCCAGATTATCCCAAGATAATAAAACACCCTATGGACCTTGGGACGATAAAACAGCGGTTAAATCTAAAATTCTATCACTCCTCTTCCGAATGTCTCGATGATCTTTTCACTATGTTCCGAAATTGTTATATATTCAACAAGCCAGGTGATGATGTGGTTGCAATGGCAATGAAACTTGAGCAGATCGCTAGAGAACGCCTTAAATTTATGCCGACTCCTGAGACCGAAATTTGTCCAC-AAAAAACCCCAAAGTCTATCCGTCCTATTGGTGCTCCTTTGCAGGTCCATCCTCCTATCGAACCAATCCATACAGCTGCTTCA-ACCAACCATACTGAAGGGTTAA-ATGGCTCAG-CTGTTTCTGTCGATCAGACTACATTACCTTTCAGACCATCAGTAACTTCTACATCTACCAAAAAGGCTAGCAAAAAGAAAAGTGATTCTACAATAGACGAATTACCGTCGACTCCCCAATCATATGATGATCTATCCCGCGATCGTCGTCAAATCAAAAAACCTAAGCGTGA-ATATGAA-GAACGCAATGTTGGCAAACGTTTACGACTTTCCGAAGCATTGAAAGCTTGCAGTAATATTCTGAAGGATATTTCCTCTCAGAGATATCGGGATCTCAATCATTTTTTCTTAAAACCAGTGGATGTCGTGGCCCTCGGGCTTCATGATTACTACGATGTTGTC-AAAAAAGCAATGGATCTCAGCACCATAAAAACAAAATTAGAAAGTGGTCAGTACCATACCAAATACGATTTCGCAGACGATGTTCGACTGATGTTTAATAATTGTTATAAGTATAATGGTGAAGATAGCGAAGTTGCTAGAGTAGGAAAACAACTTCAAGCTATTTTTGATGAAAATTTCGCCAAAGTTCCAGATGATGAGTCAGATCCTGCTGCCTCCCCTGATGGTCGTCCTGTTGATCAGAATATGTATCAGCTAATTCAAAACGCTATCAAAGAGCATCAGAAGTTAACTAATCAGTTTCAGCGTTTTAGCGAGGATTTGCAGAAAAGCACAGCTAACTTAAATTCTATCTTATCATCCTTAAGTATGGCTGTCAGAAAAGCACCTATTGGCCATAACACACCCCATATTAATTCATTACCCCCTACTCAAACTGGCCTTCCGACTGTTCCACGTCCTACTATGAATGATATAGAAGATGTAAATATCACTAAGAGAGGCAGACAATCTCAGTCGAAAACTAAGTATAGACAATCAGGACTATCTGTGCAGCACCCGTTCGCA]

[+] EMBL CD184829             [AAAGAAGTGGTTGGACGACTATTTAAAGAAAAAATTGTATGGCCGTTTACAAAACCAGTCGATCACCAGCGGCTGAACCTCCCAGATTATCCCAAGATAATAAAACACCCTATGGACCTTGGGACGATAAAACAGCGGTTAAATCTAAAATTCTATCACTCCTCTTCCGAATGTCTCGATGATCTTTTCACTATGTTCCGAAATTGTTATATATTCAACAAGCCAGGTGATGATGTGGTTGCAATGGCAATGAAACTTGAGCAGATCGCTAGAGAACGCCTTAAATTTATGCCGACTCCTGAGACCGAAATTTGTCCACAAAAAAACCCCAAAGTCTATCCGTCCTATTGGTGCTCCTTTGCAGGTCCATCCTCCTATCGAACCAATCCATACAGCTGCTTCA ACCAACCATACTGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD090212             [                                                                                                                                                                                                                                      TGATGTGGTTGCAATGGCAATGAAACTTGAGCAGATCGCTAGAGAACGCCTTAAATTTATGCCGACTCCTGAGACCGAAATTTGTCCAC AAAAAACCCCAAAGTCTATCCGTCCTATTGGTGCTCCTTTGCAGGTCCATCCTCCTATCGAACCAATCCATACAGCTGCTTCA ACCAACCATACTGAAGGGTTAA ATGGCTCAG CTGTTTCTGTCGATCAGACTACATTACCTTTCAGACCATCAGTAACTTCTACATCTACCAAAAAGGCTAGCAAAAAGAAAAGTGATTCTACAATAGACGAATTACCGTCGACTCCCCAATCATATGATGATCTATCCCGCGATCGTCGTCAAATCAAAAAACCTAAGCGTGA ATATGAA GAACGCAATGTTGGCAAACGTTTACGACTTTCCGAAGCATTGAAAGCTTGCAGTAATATTCTGAAGGATATTTCCTCTCAGAGATATCGGGATCTCAATCATTTTTTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD098213             [                                                                                                                                                                                                                                                                                                                                                                                            AACCAATCCATACAGCTGCTTCATACCAACCATACTGAAGGGTTAATATGGCTCAGTCTGTTTCTGTCGATCAGACTACATTACCTTTCAGACCATCAGTAACTTCTACATCTACCAAAAAGGCTAGCAAAAAGAGAAGTGATTCTACAATAGACGAATTACCGTCGGCT CCCAATCATATGATGATCTATCCCGCGATCGTCGTCCAATCAAAAAAGCTAAGCGTGACATATAAATGAACGCAATGTTGGCAAACGTTTACGACTTTCCGAAGCATTGAAAGCTTGCAGTAATATTCTGAAGGATATTTCCTCTCAGAGATATCGGGATCTCAATCATTTTTTCTTAAGACCAGTGGATGTCGTGGCCCTCGGGCTTCATGATTACTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD191959             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TATGATGATCTATCCCGCGATCGTCGTCAAATCAAAAAACCTAAGCGTGA ATATGAA GAACGCAATGTTGGCAAACGTTTACGACTTTCCGAAGCATTGAAAGCTTGCAGTAATATTCTGAAGGATATTTCCTCTCAGAGATATCGGGATCTCAATCATTTTTTCTTAAAACCAGTGGATGTCGTGGCCCTCGGGCTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD192774             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TATGATGATCTATCCCGCGATCGTCGTCAAATCAAAAAACCTAAGCGTGA ATATGAA GAACGCAATGTTGGCAAACGTTTACGACTTTCCGAAGCATTGAAAGCTTGCAGTAATATTCTGAAGGATATTTCCTCTCAGAGATATCGGGATCTCAATCATTTTTTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD148599             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATGATGATCTATCCCGCGATCGTCGTCAAACCAAAAAACCTAAGCGTGA ATATGAA GAACGCAATGTTGGCAAACGTTTACGACTTTCCGAAGCATTGAAAGCTTGCAGTAATATTCTGAAGGATATTTCCTCTCAGAGATATCGGGATCTCAATCATTTTTTCTTAAAACCAGTGGATGTCGTGGCCCTCGGGCTTCATGATTACTACGATGTTGTC AAAAAAGCAATGGATCTCAGCACCATAAAAACAAAATTAGAAAGTGGTCAGTACCATACCAAATACGATTTCGCAGACGATGTTCGACTGATGTTTAATAATTGTTATAAGTATAATGGTGAAGATAGCGAAGTTGCTAGAGTAGGAAAACAACTTCAAGCTATTTTTGATGAAAATTTCGCCGAAGTTCCAGATGATGAGTCAGATCCTGCTGCCTCCCCCGACGGTC                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD165639             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCTATCCCGCGATCGTCGTCAAATCAAAAAACCTAAGCGTGA ATATGAA GAACGCAATGTTGGCAAACGTTTACGACTTTCCGAAGCATTGAAAGCTTGCAGTAATATTCTGAAGGATATTTCCTCTCAGAGATATCGGGATCTCAATCATTTTTTCTTAAAACCAGTGGATGTCGTGGCCCTCGGGCTTCATGATTACTACGATGTTGTC AAAAAAGCAATGGATCTCAGCACCATAAAAACAAAATTAGAAAGTGGTCAGTACCATACCAAATACGATTTCGCAGACGATGTTCGACTGATGTTTAATAATTGTTATAAGTATAATGGTGAAGATAGCGGAGTTGCTAGAGTAGGAAAACAACTTCAAGCTATTTTTGATGAAAATTTCGCCAAAGTTCCAGATGATGAGTCAGATCCTGCTGCCTCCCCTGATGGTCGTCCTGTTGATCAGAGTATGTATCAGCTAATTCANAACGCTATCAAAGAGCATCAGAAGTTAACTAATCAGTTTCAGCGTTTTAGCGAGGATTTGCAGANAAGCACAGCTAACTTAAATTCTATCTTATCATCC                                                                                                                                                                                                            ]
[-] EMBL CD186804             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGAGATATCGGGATCTCAATCATTTTTTCTTAAAACCAGTGGATGTCGTGGCCCTCGGGCTTCATGATTACTACGATGTTGTC AAAAAAGCAATGGATCTCAGCACCATAAAAACAAAATTAGAAAGTGGTCAGTACCATACCAAATACGATTTCGCAGACGATGTTCGACTGATGTTTAATAATTGTTATAAGTATAATGGTGAAGATAGCGAAGTTGCTAGAGTAGGAAAACAACTTCAAGCTATTTTTGATGAAAATTTCGCCAAAGTTCCAGATGATGAGTCAGATCCTGCTGCCTCCCCTGATGGTCGTCCTGTTGATCAGAATATGTATCAGCTAATTCAAAACGCTATCAAAGAGCATCAGAAGTTAACTAATCAGTTTCAGCGTTTTAGC                                                                                                                                                                                                                                                            ]
[-] EMBL CD132699             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTACGATGTTGTCAAAAAAAGCAATGATTCTCAGCACCATAAAAACAAAATTAGAAAGTGGTCAGTACCATACCAAATACGATTTCGCAGACGATGTTCGACTGATGTTTAATAATTGTTATAAGTATAATGGTGAAGATAGCGAAGTTGCTAGAGTAGGAAAACAACTTCAAGCTATTTTTGATGAAAATTTCGCCAAAGTTCCAGATGATGAGTCAGATCCTGCTGCCTCCCCTGATGGTCGTCCTGTTGATCAGAATATGTATCAGCTAATTCAAAACGCTATCAAAGAGCATCAGAAGTTAACTAATCAGTTTCAGCGTTTTAGCGAGGATTTGCAGAAAAGCACAGCTAACTTAAATTCTATCTTATCATCCTTAAGTATGGCTGTCAGAAAAGCACCTATTGGCCATAACACACCCCATATTAATTCATTACCCCCTACTCAAACTGGCCTTCCGACTGTTCCACGTCCTACTATGAATGATATAGAAGATGTAAATATCACTAAGAGAGGCAGACAATCTCAGTCGAAAACTAAG                                       ]
[+] EMBL CD158678             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACAAAATTAGAAAGTGGTCAGTACCATACCAAATACGATTTCGCAGACGATGTTCGACTGATGTTTAATAATTGTTATAAGTATAATGGTGAAGATAGCGAAGTTGCTAGAGTAGGAAAACAACTTCAAGCTATTTTTGATGAAAATTTCGCCAAAGTT                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD062418             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GATAGCGAAGTTGCTAGAGTAGGAAAACAACTTCAAGCTATTTTTGATGAAAATTTCGCCAAAGTTCCAGATGATGAGTCAGATCCTGCTGCCTCCCCTGATGGTCGTCCTGTTGATCAGAATATGTATCAGCTAATTCAAAACGCTATCAAAGAGCATCAGAAGTTAACTAATCAGTTTCAGCGTTTTAGCGAGGATTTGCAGAAAAGCACAGCTAACTTAAATTCTATCTGATCATCCTTAAGTATGGCTGTCAGAAAAGCACCTATTGGCCATAACACACCCCATATTAATTCATTACCCCCTACTCAAACTGGCCTTCCGACTGTTCCACGTCCTACTATGAATGATATAGAAGATGTAAATATCACTAAGAGTGGCAGACAATCTCAGTCGAAAACTAAGTATAGACAATCAGGACTATCTGTGCAGCACCCGTTCGCA]




>consensus_10552#0
AAAGAAGTGGTTGGACGACTATTTAAAGAAAAAATTGTATGGCCGTTTACAAAACCAGTC
GATCACCAGCGGCTGAACCTCCCAGATTATCCCAAGATAATAAAACACCCTATGGACCTT
GGGACGATAAAACAGCGGTTAAATCTAAAATTCTATCACTCCTCTTCCGAATGTCTCGAT
GATCTTTTCACTATGTTCCGAAATTGTTATATATTCAACAAGCCAGGTGATGATGTGGTT
GCAATGGCAATGAAACTTGAGCAGATCGCTAGAGAACGCCTTAAATTTATGCCGACTCCT
GAGACCGAAATTTGTCCACAAAAAACCCCAAAGTCTATCCGTCCTATTGGTGCTCCTTTG
CAGGTCCATCCTCCTATCGAACCAATCCATACAGCTGCTTCAACCAACCATACTGAAGGG
TTAAATGGCTCAGCTGTTTCTGTCGATCAGACTACATTACCTTTCAGACCATCAGTAACT
TCTACATCTACCAAAAAGGCTAGCAAAAAGAAAAGTGATTCTACAATAGACGAATTACCG
TCGACTCCCCAATCATATGATGATCTATCCCGCGATCGTCGTCAAATCAAAAAACCTAAG
CGTGAATATGAAGAACGCAATGTTGGCAAACGTTTACGACTTTCCGAAGCATTGAAAGCT
TGCAGTAATATTCTGAAGGATATTTCCTCTCAGAGATATCGGGATCTCAATCATTTTTTC
TTAAAACCAGTGGATGTCGTGGCCCTCGGGCTTCATGATTACTACGATGTTGTCAAAAAA
GCAATGGATCTCAGCACCATAAAAACAAAATTAGAAAGTGGTCAGTACCATACCAAATAC
GATTTCGCAGACGATGTTCGACTGATGTTTAATAATTGTTATAAGTATAATGGTGAAGAT
AGCGAAGTTGCTAGAGTAGGAAAACAACTTCAAGCTATTTTTGATGAAAATTTCGCCAAA
GTTCCAGATGATGAGTCAGATCCTGCTGCCTCCCCTGATGGTCGTCCTGTTGATCAGAAT
ATGTATCAGCTAATTCAAAACGCTATCAAAGAGCATCAGAAGTTAACTAATCAGTTTCAG
CGTTTTAGCGAGGATTTGCAGAAAAGCACAGCTAACTTAAATTCTATCTTATCATCCTTA
AGTATGGCTGTCAGAAAAGCACCTATTGGCCATAACACACCCCATATTAATTCATTACCC
CCTACTCAAACTGGCCTTCCGACTGTTCCACGTCCTACTATGAATGATATAGAAGATGTA
AATATCACTAAGAGAGGCAGACAATCTCAGTCGAAAACTAAGTATAGACAATCAGGACTA
TCTGTGCAGCACCCGTTCGCA

consensusID : consensus_10552#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 911
fasta sequence

                              [TAATTTATCAAATGAAAATTACATGCTAAGTACTGTACAAAAATGCATTCAATGATCTTTTTATACACAGGACCACAAACAATTAAAAGGGAATTAGGTACAAATTTCTCACAAAAACAACGCCATGTGTTGGAAACATAGTGGTGTATAAGAAAAAACCAAGAATTGATGTACAAAAAATAGGAAAGCCACTGAGGCAAAAAAAATCAAGTACTGAAGTATTTGGTGCTTGATTAAAATCTTACAACTTCAGCTCGTAAAAAAGTGAAATTCTTGACTTGATGTTAGCACAGTGGCTGGCAGTAAAAAGGTGTAAGTTTTAAAAAAAGAATGATATACGTTAAGTAAATAAGGATTTAAAGAAATTACAAAATGAAACCATACTGTAGTAAAGTTGCTTAGAAAAAGAAAGAATACTGGATGACAATAAAGAATGCAGCATTCAATTACTGGGAATAAGTTGCAAATGTAGCAATTCATCAGGACTCACTATAAGATTTAGAATCTGAAGAATCAGATTCACTTGAGTCTGAAGTACTCTCGGAATCACTTGAACTGGATGATGATGCGCTCAAACGATTAGTACCATGTGACT-TTTTCGGATTATGTGCATTATGATATCCAGGAGCACCTTGAGGAAGTCCTCCAATCTCTCTCAATCGATTTTCCAGCTCTTCTGTTTTCTCTTTCATGCACTCTTCACGAGTCTTGC-CTGGTGGGACGCCACTTAAACCCTTCTTCACATATTTCCGGCTCCCGGATTTTGTCTTTTGCAGAACAGATTTTACATACTTCTCTAATTCACGCAAAGTTGTATGTTGCAGCGTTTCAAAATCAATTTCGATTTCATCCGGATTACAATCCCGGTGCGACGGTTCACGTTGCTGGACGATTTGGACAACTCTACCTAA]

[+] EMBL CD073320             [TAATTTATCAAATGAAAATTACATGCTAAGTACTGTACAAAAATGCATTCAATGATCTTTTTATACACAGGACCACAAACAATTAAAAGGGAATTAGGTACAAATTTCTCACAAAAACAACGCCATGTGTTGGAAACATAGTGGTGTATAAGAAAAAACCAAGAATTGATGTACAAAAAATAGGAAAGCCACTGAGGCAAAAAAAATCAAGTACTGAAGTATTTGGTGCTTGATTAAAATCTTACAACTTCAGCTCGTAAAAAAGTGAAATTCTTGACTTGATGTTAGCACAGTGGCTGGCAGTAAAAAGGTGTAAGTTTTAAAAAAAGAATGATATACGTTAAGTAAATAAGGATTTAAAGAAATTACAAAATGAAACCATACTGTAGTAAAGTTGCTTAAAAAAAAAAAGAATACTGGATGACAATAAAGAATGCAGCATTCAATTACTGGGAATAAGTTGCAAATGTAGCAATTCATCAGGACTCACTATAAGATTTAGAATCTGAAGAAT                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD078860             [                                                                                                                                                                                     AGGAAAGCCACTGAGGCAAAAATAATCAAGTACTGAAGTATTTGGTGCTTGATTAGAATCTTACGACTTCAGCTCGTAAAAAAGTGAAATTCTTGACTTGATGTTAGCTCAGTGGCTGGCAGTAAAAAGGTGTAAGTTTTAAAAAAAGAATGATATACGTTAAGTAAATAAGGATTTAAAGAAATTACAAAATGAAACCATACTGTAGTAAAGTTGCTTAGAAAAAGAAAGAATACTGGATGACAATAAAGAATGCAGCATTCAATTACTGGGAATAAGTTGCAAATGTAGCAATTCATCAGGACTCACTATAAGATTTAGAATCTGAAGAATCAGATTCACTTGAGTCTGAAGTACTCTCGGAATCACTTGATCTGGATGATGATGCGCTCAAACGATTAGTACCATGTGACT TTTTCGGATTATGTGCATTATGATATCCAGGAGCACCTTGAGGAAGTCCTCCAATCTCTCTCAATCGATTTTCCAGCTCTTCTGTTTTCTCTTTCATGCACTCTTCGCGAGTCATGC CTGGTGGGACGCCACTTAAACCCTTCTTCACA                                                                                                                                                                       ]
[-] EMBL CD083301             [                                                                                                                                                                                                                                                                                                                                                TACGTTAAGTAAATAAGGATTTAAAGAAATTACAAAATGAAACCATACTGTAGTAAAGTTGCTTAGAAAAAGAAAGAATACTGGATGACAATAAAGAATGCAGCATTCAATTACTGGGAATAAGTTGCAAATGTAGCAATTCATCAGGACTCACTATAAGATTTAGAATCTGAAGAATCAGATTCACTTGAGTCTGAAGTACTCTCGGAATCACTTGAACTGGATGATGATGCGCTCAAACGATTAGTACCATGTGACTATTTTCGGATTATGTGCATTATGATATCCAGGAGCACCTTGAGGAAGTCCTCCAATCTCTCTCAATCGATTTTCCAGCTCTTCTGTTTTCTCTTTCATGCACTCTTCACGAGTCTTGCACTGGTGGGACGCCACTTAAACCC                                                                                                                                                                                ]
[-] EMBL CD126245             [                                                                                                                                                                                                                                                                                                                                                                                                                                           TAAAGAATGCAGCATTCAATTACTGGGAATAAGTTGCAAATGTAGCAATTCATCAGGACTCACTATAAGATTTAGAATCTGAAGAATCAGATTCACTTGAGTCTGAAGTACTCTCGGAATCACTTGAACTGGATGATGATGCGCTCAAACGATTAGTACCATGTGACT TTTTCGGATTATGTGCATTATGATATCCAGGAGCACCTTGAGGAAGTCCTCCAATCTCTCTCAATCGATTTTCCAGCTCTTCTGTTTTCTCTTTCATGCACTCTTCACGAGTCTTGC CTGGTGGGACGCCACTTAAACCCTTCTTCACATATTTCCGGCTCCCGGATTTTGTCTTTTGCAGAACAGATTTTACATACTTCTCTAATTCACGCAAAGTTGTATGTTGCAGCGTTTCAAAATCAATTTCGATTTCATCCGGATTACAATCCCGGTGCGACGGTTCACGTTGCTGGACGATTTGGACAACTCTACCTAA]
[-] EMBL CD112794             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TACCATGTGACT TTTTCGGATTATGTGCATTATGATATCCAGGAGCACCTTGAGGAAGTCCTCCAATCTCTCTCAATCGATTTTCCAGCTCTTCTGTTTTCTCTTTCATGCACTCTTCACGAGTCTTGC CTGGTGGGACGCCACTTAAACCCTTCTTCACATATTTCCGGCTCCCGGATTTTGTCTTTTGCAGAACAGATTTTACATACTTCTCTAATTCACGCAAAGTTGTATGTTGCAGCGTTTCAAAATCAATTTCG                                                                    ]




>consensus_10552#1
TAATTTATCAAATGAAAATTACATGCTAAGTACTGTACAAAAATGCATTCAATGATCTTT
TTATACACAGGACCACAAACAATTAAAAGGGAATTAGGTACAAATTTCTCACAAAAACAA
CGCCATGTGTTGGAAACATAGTGGTGTATAAGAAAAAACCAAGAATTGATGTACAAAAAA
TAGGAAAGCCACTGAGGCAAAAAAAATCAAGTACTGAAGTATTTGGTGCTTGATTAAAAT
CTTACAACTTCAGCTCGTAAAAAAGTGAAATTCTTGACTTGATGTTAGCACAGTGGCTGG
CAGTAAAAAGGTGTAAGTTTTAAAAAAAGAATGATATACGTTAAGTAAATAAGGATTTAA
AGAAATTACAAAATGAAACCATACTGTAGTAAAGTTGCTTAGAAAAAGAAAGAATACTGG
ATGACAATAAAGAATGCAGCATTCAATTACTGGGAATAAGTTGCAAATGTAGCAATTCAT
CAGGACTCACTATAAGATTTAGAATCTGAAGAATCAGATTCACTTGAGTCTGAAGTACTC
TCGGAATCACTTGAACTGGATGATGATGCGCTCAAACGATTAGTACCATGTGACTTTTTC
GGATTATGTGCATTATGATATCCAGGAGCACCTTGAGGAAGTCCTCCAATCTCTCTCAAT
CGATTTTCCAGCTCTTCTGTTTTCTCTTTCATGCACTCTTCACGAGTCTTGCCTGGTGGG
ACGCCACTTAAACCCTTCTTCACATATTTCCGGCTCCCGGATTTTGTCTTTTGCAGAACA
GATTTTACATACTTCTCTAATTCACGCAAAGTTGTATGTTGCAGCGTTTCAAAATCAATT
TCGATTTCATCCGGATTACAATCCCGGTGCGACGGTTCACGTTGCTGGACGATTTGGACA
ACTCTACCTAA

consensusID : consensus_10552#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 262
fasta sequence

                              [ACGAATTACCGTCGACTCCCCAATCATATGATGATCTATCCCGCGATCGTCGTCAAATCAAAAAACCTAAGCGTGAATATGAAGAACGCAATGTTGGCAAACGTTTACGACTTTCCGAAGCATTGAAAGCTTGCAGTAATATTCTGAAGGATATTTCCTCTCAGAGATATCGGGTATGCGTTTGTAGCATTTTGAGCTATTATTTCTAGGATCTCAATCATTTTTTCTTAAAACCAGTGGATGTCGTGGCCCTCGGGCTTCA]

[+] EMBL CD090231             [ACGAATTACCGTCGACTCCCCAATCATATGATGATCTATCCCGCGATCGTCGTCAAATCAAAAAACCTAAGCGTGAATATGAAGAACGCAATGTTGGCAAACGTTTACGACTTTCCGAAGCATTGAAAGCTTGCAGTAATATTCTGAAGGATATTTCCTCTCAGAGATATCGGGTATGCGTTTGTAGCATTTTGAGCTATTATTTCTAGGATCTCAATCATTTTTTCTTAAAACCAGTGGATGTCGTGGCCCTCGGGCTTCA]




>consensus_10552#2
ACGAATTACCGTCGACTCCCCAATCATATGATGATCTATCCCGCGATCGTCGTCAAATCA
AAAAACCTAAGCGTGAATATGAAGAACGCAATGTTGGCAAACGTTTACGACTTTCCGAAG
CATTGAAAGCTTGCAGTAATATTCTGAAGGATATTTCCTCTCAGAGATATCGGGTATGCG
TTTGTAGCATTTTGAGCTATTATTTCTAGGATCTCAATCATTTTTTCTTAAAACCAGTGG
ATGTCGTGGCCCTCGGGCTTCA

consensusID : consensus_10552#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 139
fasta sequence

                              [AAGAGTGCATGAAAGAGAAAACAGAAGAGCTGGAAAATCGAACCAATCCATACAGCTGCTTCAACCAACCATACTGAAGGGTTAAATGGCTCAGCTGTTTCTGTCGATCAGACTACATTACCTTTCAGACCATCAGTAA]

[+] EMBL CD113096             [AAGAGTGCATGAAAGAGAAAACAGAAGAGCTGGAAAATCGAACCAATCCATACAGCTGCTTCAACCAACCATACTGAAGGGTTAAATGGCTCAGCTGTTTCTGTCGATCAGACTACATTACCTTTCAGACCATCAGTAA]




>consensus_10552#3
AAGAGTGCATGAAAGAGAAAACAGAAGAGCTGGAAAATCGAACCAATCCATACAGCTGCT
TCAACCAACCATACTGAAGGGTTAAATGGCTCAGCTGTTTCTGTCGATCAGACTACATTA
CCTTTCAGACCATCAGTAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10552#0      AAAGAAGTGGTTGGACGACTATTTAAAGAAAAAATTGTATGGCCGTTTACAAAACCAGTC 60
consensus_10552#2      ------------------------------------------------------------
consensus_10552#3      ------------------------------------------------------------
consensus_10552#1      ------------------------------------------------------------
                                                                                   

consensus_10552#0      GATCACCAGCGGCTGAACCTCCCAGATTATCCCAAGATAATAAAACACCCTATGGACCTT 120
consensus_10552#2      ------------------------------------------------------------
consensus_10552#3      ------------------------------------------------------------
consensus_10552#1      ------------------------------------------------------------
                                                                                   

consensus_10552#0      GGGACGATAAAACAGCGGTTAAATCTAAAATTCTATCACTCCTCTTCCGAATGTCTCGAT 180
consensus_10552#2      ------------------------------------------------------------
consensus_10552#3      ------------------------------------------------------------
consensus_10552#1      ------------------------------------------------------------
                                                                                   

consensus_10552#0      GATCTTTTCACTATGTTCCGAAATTGTTATATATTCAACAAGCCAGGTGATGATGTGGTT 240
consensus_10552#2      ------------------------------------------------------------
consensus_10552#3      ------------------------------------------------------------
consensus_10552#1      -TAATTTATCAAATGAAAATTACATGCTAAGTACTGTACAAAAATGCATTCAATGATCTT 59
                                                                                   

consensus_10552#0      GCAATGGCAATGAAACTTGAGCAGATCGCTAGAGAACGCCTTAAATTTATGCCGACTCCT 300
consensus_10552#2      ------------------------------------------------------------
consensus_10552#3      ------------------------------------------------------------
consensus_10552#1      TTTATACACAGGACCACAAACAATTAAAAGGGAATTAGGTACAAATTTCTCACAAAAACA 119
                                                                                   

consensus_10552#0      GAGACCGAAATTTGTCCACAAAAAACCCCAAAGTCTATCCGTCCTATTGGTGCTCCTTTG 360
consensus_10552#2      ------------------------------------------------------------
consensus_10552#3      ------------------------------------------------------------
consensus_10552#1      ACGCCATGTGTTGGAAACATAGTGGTGTATAAGAAAAAACCAAGAATTGATGTACAAAAA 179
                                                                                   

consensus_10552#0      CAGGTCCATCCTCCTATCGAACCAATCCATACAGCTGCTTCAACCAACCATACTGAAGGG 420
consensus_10552#2      ------------------------------------------------------------
consensus_10552#3      ------------------------------------------------------------
consensus_10552#1      ATAGGAAAGCCACTGAGGCAAAAAAAATCAAGTACTGAAGTATTTGGTGCTTGATTAAAA 239
                                                                                   

consensus_10552#0      TTAAATGGCTCAGCTGTTTCTGTCGATCAGACTACATTACCTTTCAGACCATCAGTAACT 480
consensus_10552#2      ------------------------------------------------------------
consensus_10552#3      ------------------------------------------------------------
consensus_10552#1      TCTTACAACTTCAGCTCGTAAAAAAGTGAAATTCTTGACTTGATGTTAGCACAGTGGCTG 299
                                                                                   

consensus_10552#0      TCTACATCTACCAAAAAGGCTAGCAAAAAGAAAAGTGATTCTACAATAGACGAATTACCG 540
consensus_10552#2      -------------------------------------------------ACGAATTACCG 11
consensus_10552#3      ------------------------------------------------------------
consensus_10552#1      GCAGTAAAAAGGTGTAAGTTTTAAAAAAAGAATGATATACGTTAAGTAAATAAGGATTTA 359
                                                                                   

consensus_10552#0      TCGACTCCCCAATCATATGATGATCTATCCCGCGATCGTCGTCAAATCAAAAAACCTAAG 600
consensus_10552#2      TCGACTCCCCAATCATATGATGATCTATCCCGCGATCGTCGTCAAATCAAAAAACCTAAG 71
consensus_10552#3      -------------------------------------------------AAGAGT----G 7
consensus_10552#1      AAGAAATTACAAAATGAAACCATACTGTAGTAAAGTTGCTTAGAAAAAGAAAGAATACTG 419
                                                                        **        *

consensus_10552#0      CGTGAATATGAAGAACGCAATGTTGGCAAACGTTTACGACTTTCCGAAGCATTGAAAGCT 660
consensus_10552#2      CGTGAATATGAAGAACGCAATGTTGGCAAACGTTTACGACTTTCCGAAGCATTGAAAGCT 131
consensus_10552#3      CATGAAAGAGAAAACAGAAGAGCTGGAAAA---TCGAACCAATCCATACAGCTG----CT 60
consensus_10552#1      GATGACAATAAAGAATGCAGCATTCAATTAC--TGGGAATAAGTTGCAAATGTAGCA-AT 476
                         ***     ** *  * *    *     *   *             *    *      *

consensus_10552#0      TGCAGTAAT-ATTCTGAAGGATATTTCCTCTCAGAGATATCGGGATCTCAATCATTTTTT 719
consensus_10552#2      TGCAGTAAT-ATTCTGAAGGATATTTCCTCTCAGAGATATCGGG--------TATGCGTT 182
consensus_10552#3      TCAACCAACCATACTGAAGGGTTAAATGGCTCAGCTGTTTCTGTC-----GATCAGACTA 115
consensus_10552#1      TCATCAGGACTCACTATAAGATTTAGAATCTGAAGAATCAGATTCAC----TTGAGTCTG 532
                       *            **  * * *       ** *    *                    * 

consensus_10552#0      CTTAAAACCAGTGGATGTCGTGGCCCTCGGGCTTCATGATTACTACGATGTTGTCAAAAA 779
consensus_10552#2      TGTAGCATTTTGAGCTATTAT----------TTCTAGGATCTCAATCATTTTTTCTTAAA 232
consensus_10552#3      CATTACCTTTCAGACCATCAGTAA------------------------------------ 139
consensus_10552#1      AAGTACTCTCGGAATCACTTGAACT----GGATGATGATGCGCTCAAACGATTAGTACCA 588
                                                                                   

consensus_10552#0      AGCAATGGATCTCAGCACCATAAAAACAAAATTAGAAAGTGGTCAGTACCATACCAAATA 839
consensus_10552#2      ACCAGTGGATGTCGTGGCCCTCGGGCTTCA------------------------------ 262
consensus_10552#3      ------------------------------------------------------------
consensus_10552#1      TGTGACTTTTTCGGATTATGTGCATTATGATATCCAGGAGCACCTTGAGGAAGTCCTCCA 648
                                                                                   

consensus_10552#0      CGATTTCGCAGACGATGTTCGACTGATGTTTAATAATTGTTATAAGTATAATGGTGAAGA 899
consensus_10552#2      ------------------------------------------------------------
consensus_10552#3      ------------------------------------------------------------
consensus_10552#1      ATCTCTCTCAATCGATTTTCCAGCTCTTCTGTTTTCTCTTTCATGCACTCTTCACGAGTC 708
                                                                                   

consensus_10552#0      TAGCGAAGTTGCTAGAGTAGGAAAACAACTTCAAGCTATTTTTGATGAAAATTTCGCCAA 959
consensus_10552#2      ------------------------------------------------------------
consensus_10552#3      ------------------------------------------------------------
consensus_10552#1      TTGCCTGGTGGGACGCCACTTAAACCCTTCTTCACATATTTCCGGCTCCCGGATTTTGTC 768
                                                                                   

consensus_10552#0      AGTTCCAGATGATGAGTCAGATCCTGCTGCCTCCCCTGATGGTCGTCCTGTTGATCAGAA 1019
consensus_10552#2      ------------------------------------------------------------
consensus_10552#3      ------------------------------------------------------------
consensus_10552#1      TTTTGCAGAACAGATTTTACATACTTCTCTAATTCACGCAAAGTTGTATGTTGCAGCGTT 828
                                                                                   

consensus_10552#0      TATGTATCAGCTAATTCAAAACGCTATCAAAGAGCATCAGAAGTTAACTAATCAGTTTCA 1079
consensus_10552#2      ------------------------------------------------------------
consensus_10552#3      ------------------------------------------------------------
consensus_10552#1      TCAAAATCAATTTCGATTTCATCCGGATTACAATCCCGGTGCGACGGTTCACGTTGCTGG 888
                                                                                   

consensus_10552#0      GCGTTTTAGCGAGGATTTGCAGAAAAGCACAGCTAACTTAAATTCTATCTTATCATCCTT 1139
consensus_10552#2      ------------------------------------------------------------
consensus_10552#3      ------------------------------------------------------------
consensus_10552#1      ACGATTTGGACAACTCTACCTAA------------------------------------- 911
                                                                                   

consensus_10552#0      AAGTATGGCTGTCAGAAAAGCACCTATTGGCCATAACACACCCCATATTAATTCATTACC 1199
consensus_10552#2      ------------------------------------------------------------
consensus_10552#3      ------------------------------------------------------------
consensus_10552#1      ------------------------------------------------------------
                                                                                   

consensus_10552#0      CCCTACTCAAACTGGCCTTCCGACTGTTCCACGTCCTACTATGAATGATATAGAAGATGT 1259
consensus_10552#2      ------------------------------------------------------------
consensus_10552#3      ------------------------------------------------------------
consensus_10552#1      ------------------------------------------------------------
                                                                                   

consensus_10552#0      AAATATCACTAAGAGAGGCAGACAATCTCAGTCGAAAACTAAGTATAGACAATCAGGACT 1319
consensus_10552#2      ------------------------------------------------------------
consensus_10552#3      ------------------------------------------------------------
consensus_10552#1      ------------------------------------------------------------
                                                                                   

consensus_10552#0      ATCTGTGCAGCACCCGTTCGCA 1341
consensus_10552#2      ----------------------
consensus_10552#3      ----------------------
consensus_10552#1      ----------------------