cluster # 10553

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Schistosoma mansoni
cluster # 10553 cluster # 10553 Sequences # 18 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10553#0 length = 1853 sequences # 17

consensus_10553#1 length = 295 sequences # 1

consensusID : consensus_10553#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 1853
fasta sequence

                              [ATGTTTTGAAACTATGACGAAGGTCTTTATTCTGTATGAGCACGCGTTAGGATATGCTCTGTTCAGAGTTAAAATCAAGTCAGTAGAAACTTCAGATGTTGTTACTGCGTTACAACAGTTAGCTGCAGATCTTTTGAACAATGAAGAAGAGTTTATGAAATGCTTTAAATTGCATGCATTTGTGCCTTTCTCTTCCTCAGCTAGTGCTCTACAAAATTGTAATGGGATATCAGAAGGCGTTGTTCCACAGGAACTTAAAACGTTCATAGAGGAGAATTTACCTGCTTCTTCAGATGTTTTGCTGTGCATCTCAGACCGGAAACTCGCTGAATCTCTTAAAGCGCCTGAAATCGGATTGCCAGAAACTATTTCATGTTCCTCTGAATCCATCCTTCATGAAGTCTACCGGGCTCTCCGATTTTACTTTCCTAAATATATCAAAGAGTTTTCTCATTTCGACGAATCAAAAGCTCAAATAGGTTTGGGTCATAGTTATTCTAGAGCTAAAGTGAAATTCAATATATACA-GAAATGACAATATGATTATTCAATCCATAAATTTACTAGACCAATTAGATAAAG-ATGTAAATAACTTTTGCATGCGTGTCAAAGAATGGTTCTCATATCATTTCCCAGAATTGTCAAAAATTGTTCCTGACAATCCAACTTTCGTTAAAGTAGTCGGTCTTATTCGCACTCGAGCTGGTGCAACAGAAGAAAATCTTGATGCATTGGAGGCCTTAACTAATAGTCAAGTTGCTTCAGATATCATTGAATCTGCCAAGTCATCCGTTGGCTTTGATATTACGGATGATGATGCTGAGAATTTGGCAACATTCACTGAAAAAATTAACGCATTAATTGAACGTAGAAGACTAACACAAGAATATTTAGCTAAGAAGCTTGCTGGTGTTGCTCCAAACTTGAGCACAATGATTGGGGATAGAGTAAGTGCAAGGCTAATTGCTCATGCGGGATCCCTTACGAACTTGGCTAAATTCCCTGCCTCGACAATTCAGATATTGGGGGCGGAAAAAGCGTTATTCAGAGCATTACGATCACGTGGTGCTACACCAAAGTACGGATTGATTTACCATA-GT-CATTTATCGCTCGTGCTGCGCGAGAAAACAAGGGAAAAATCTCTAGATTTTTGGCTGCAAAATGTGCTATAGCCTCTCGGATCGACTGCTTTAGTGAAGTGCTTTGTGATATCTATGGGAGACATTTGAAGCAACAAATTGAGGATAGATTGAATTATTTTGAGACTGGTACTACGCCTCCTACAAATGCTGAAGCTATGGCGCGCGCAATCGCCGAGGTAAATAAATATATTCAACGAACAAAGAAAAAAGCGATTAAAACACTGAATAAAAGAGATTCAGATAGTCAAGAAGAAGCAGCTGTAACCACAATGGAAACACCTATATCAGATGGTAAAAAGAAACGTAAGAAAAAACGTCATTTAAATGGGAACATCACCAC--TACTACTACTACTACTACTACTACTACTACTACCAATACTACTGTTGTAGATGGTGTTTTGAATGATCAGAATGAAGTAATCAATCTTGATGAAGGTGAATTAGATCAACAAGACAC-TGAAATAAATCAATATCAGTTATTAAATGATGACAAAGAAGAGAAAAGTATAATAGGGAAGAAAAAGAAAAAACGTCATCATTCAGAATCGATTGAGATCGTAGAAAATTCAATGTTAACAAATGGTAATAGTATTTGTGTAGAAACGATGGAAACACCAGTATCATGTAAACGTAAACGATCAGCTTCTGAGTCAAGTATACTTTTAGAGGATATGAAACCGGATAGTTTAAAAAAAAAAAAAAAAAAAAAAAG]

[+] EMBL CD162793             [ATGTTTTGAAACTATGACGAAGGTCTTTATTCTGTATGAGCACGCGTTAGGATATGCTCTGTTCAGAGTTAAAATCAAGTCAGTAGAAACTTCAGATGTTGTTACTGCGTTACAACAGTTAGCTGCAGATCCTTTGAACAATGAAGAAGAGTTTATGAAATGCTTTAAATTGCATGCATTTGTGCCTTTCTCTTCCTCAGCTAGTGCTCTACAGAATTGTAATGGGATATCAGAAGGCGTTGTTCCACAGGAACTTAAAACGTTCATAGAGGAGAATTTACCTGCTTCTTCAGATGTTTTGCTGTGCATCTCAGACCGGAAACTCGCTGAATCTCTTAAAGCGCCTGAAATCGGATTGCCAGAAACTATTTCATGTTCCTCTGAATCCATCCTTCATGAAGTCTACCGGGCTCTCCGATTTTACTTTCCTAAATATATCAAAGAGTTTTCTCATTTCGACGAATCAAAAGCTCAAATAGGTTTGGGTCATAGTTATTCTAGAGCTAAAGTGAAATTCAATATATACA GAAATGACAATATGATTATTCAATCCATAAATTTACTAGACCAATTAGATAAAGAATGT AATAACTTTTGCATGCGTGTCAAAGAATGGTTCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD163124             [        AAACTATGACGAAGGTCTTTATTCTGTATGAGCACGCGTTAGGATATGCTCTGTTCAGAGTTAAAATCAAGTCAGTAGAAACTTCAGATGTTGTTACTGCGTTACAACAGTTAGCTGCAGATCTTTTGAACAATGAAGAAGAGTTTATGAAATGCTTTAAATTGCATGCATTTGTGCCTTTCTCTTCCTCAGCTAGTGCTCTACAAAATTGTAATGGGATATCAGAAGGCGTTGTTCCACAGGAACTTAAAACGTTCATAGAGGAGAATTTACCTGCTTCTTCAGATGTTTCGCTGTGCATCTCAGACCGGAAACTCGCTGAATCTCTTAAAGCGCCTGAAATCGGATTGCCAGAAACTATTTCATGTTCCTCTGAATCCATCCTTCATGAAGTCTACCGGGCTCTCCGATTTTACTTTCCTAAATATATCAAAGAGTTTTCTCATTTCGACGAATCAAAAGCTCAAATAGGTTTGGGTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD163191             [                     GGTCTTTATTCTGTATGAGCACGCGTTAGGATATGCTCTGTTCAGAGTTAAAATCAAGTCAGTAGAAACTTCAGATGTTGTTACTGCGTTACAACAGCTAGCTGCAGATCTTTTGAACAATGAAGAAGAGTTTATGAAATGCTTTAAATTGCATGCATTTGTGCCTTTCTCTTCCTCAGCTAGTGCTCTACAAAATTGTAATGGGATATCAGAAGGCGTTGTTCCACAGGAACTTAAAACGTTCATAGAGGAGAATTTACCTGCTTCTTCAGATGTTTTGCTGTGCATCTCAGACCGGAAACTCGCTGAATCTCTTAAAGCGCCTGAAATCGGATTGCCAGAAACTATTTCATGTTCCTCTGAATCCATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD184722             [                                                                                                                                                                                                                                            GCGTTGTTCCACAGGAACTTAANACGTTCATAGAGGAGGATTTACCTGCTTCTTCAGATGTTTTGCTGTGCATCTCAGACCGGAAACTCGCTGAATCTCTTAAAGCGCCTGAAATCGGATTGCCAGAAACTATTTCATGTTCCTCTGAATCCATCCTTCATGAAGTCTACCGGGCTCTCCGATTTTACTTTCCTAAATATATCAAAGAGTTTTCTCATTTCGACGAATCAAAAGCTCAAATAGGTTTGGGTCATAGTTATTCTAGAGCTAAAGTGAAATTCAATATATACA GAAATGACAATATGATTATTCAATCCATAAATTTACTAGACCAATTAGATAAAG ATGTAAATAACTTTTGCATGCGTGTCAAAGAATGGTTCTCATATCATTTCCCAGAATTGTCAAAAATTGTTCCTGACAATCCAACTTTCGTTAAAGTAGTCGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD078342             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGAAATTCAATATATACA GAAATGACAATATGATTATTCAATCCATAAATTTACTAGACCAATTAGATAAAG ATGTAAATAACTTTTGCATGCGTGTCAAAGAATGGTTCTCATATCATTTCCCAGAATTGTCAAAAATTGTTCCTGACAATCCAACTTTCGTTAAAGTAGTCGGTCTTATTCGCACTCGAGCTGGTGCAACAGAAGAAAATCTTGATGCATTGGAGGCCTTAACTAATAGTCAAGTTGCTTCAGATATCATTGAATCTGCCAAGTCATCCGTTGGCTTTGATATTACGGATGATGATGCTGAGAATTTGGCAACATTCACTGAAAAAATTAACGCATTAATTGAACGTAGAAGACTAACACAAGAATATTTAGCTAAGAAGCTTGCTGGTGTTGCTCCAAACTTGAGCACAATGATTGGGGATAGAGTAAGTGCAAGGCTAATTGCTCATGCGGGATCCCTTACGAACTTGGCTAAATTCCCTGCCTCGACAATTCAGATATTGNGGGCGGAAAAAGCGTTATTCAGAGCATTACGATCACGTGGTGCTACACCAAAGTACGGATTGATTTACCATANGT CATTTATCGCTCGTGCTGCGCGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD078261             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGAAATTCAATATATACATGAAATGACAATATGATTATTCAATCCATAAATTTACTAGACCAATTAGATAAAG ATGTAAATAACTTTTGCATGCGTGTCAAAGAATGGATCTCATATCATTTCCCAGAATTGTCAAAAATTGTTCCTGACAATCCAACTTTCGTTAAAGTAGTCGGTCTTATTCGCACTCGAGCTGGTGCAACAGAATAAAATCTTGATGCATTGGAGGCCTTAACTAATAGTCAAGTTGCTTCAGATATCATTGAATCTGCCAAGTCATCCGTTGGCTTTGATATTACGGATGATGATGCTGAGAATTTGGCAACATTCACTGAAAAAATTAACGCATTAATTGAACGTAGAACACTAACACAAGAATATTTAGCTAAGAAGCTTGCTGGTGTTGCTCCAAACTTGAGCACAATGATTGGGGATAGAGTAAGTGCAAGGCTAATTGCTCATGCGGGATCCCTTACGAACTTGGCTAAATTCCCTGCCTCGACAATTCAGATATTGCGGGCGGAAAAAGCGTTATTCAGAGCATTACGATCACGTGGTGCTACACCAAAGTACGGATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD067639             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAACTTTCGTTAAAGTAGTCGGTCTTATTCGCACTCGAGCTGGTGCAACAGAAGAAAATCTTGATGCATTGGAGGCCTTAACTAATAGTCAAGTTGCTTCAGATATCATTGAATCTGCCAAGTCATCCGTTGGCTTTGATATTACGGATGATGATGCTGAGAATTTGGCAACATTCACTGAAAAAATTAACGCATTAATTGAACGTAGAAGACTAACACAAGAATATTTAGCTAAGAAGCTTGCTGGTGTTGCTCCAAACTTGAGCACAATGATTGGGGATAGAATAAGTGCAAGGCTAATTGCTCATGCGGGATCCCTTACGAACTTGGCTAAATTCCCTGCCTCGACAATTCAGATATTGGGGGCGGAAAAAGCGTTATTCAGAGCATTACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD153128             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGAGCACAATGATTGGGGATAGAGTAAGTGCAAGGCTAATTGCTCATGCGGGATCCCTTACGAACTTGGCTAAATTCCCTGCCTCGACAATTCAGATATTGGGGGCGGAAAAAGCGTTATTCAGAGCATTACGATCACGTGGTGCTACACCAAAGTACGGATTGATTTACCATA GTCCATTTATCGCTCGTGCTGCGCGAGAAAACAAGGGAAAAATCTCTAGATTTTTGGCTGCAAAATGTGCTATAGCCTCTCGGATCGACTGCTTTAGTGAAGTGCTTTGTGATATCTATGGGAGACATTTGAAGCAACAAATTGAGGATAGATTGAATTATTTTGAGACTGGTACTACGCCTCCTACAAATGCTGAAGCTATGGCGCGCGCAATCGCCGAGGTAAATAAATATATTCAACGAACAAAGAAAAAAGCGATTAAAACACTGAATAAAAGAGATTCAGATAGTCAAGAAGAAGCAGCTGTAACCACAATGGAAACACCTATATCAGATGGTAAAAAGAAACGTAAGAAAAAACGTCATTTAAATGGGAACATCACCAC  TACTACTACTACTACTACTACTACTACTACTACCAATACTACTGg                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD095112             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACGAACTTGGCTAAATTCCCTGCCTCGACAATTCAGATATTGGGGGCGGAAAAAGCGTTATTCAGAGCATTACGATCACGTGGTGCTACACCAAAGTACGGATTGATTTACCATA GTCCATTTATCGCTCGTGCTGCGCGAGAAAACAAGGGAAAAGTCTCTAGATTTTTGGCTGCAAAATGTGCTATAGCCTCTCGGATCGACTGCTTTAGTGAAGTGCTTTGTGATATCTATGGGAGACATTTGAAGCAACAAATTGAGGATAGATTGAATTATTTTGAGACTGGTACTACGCCTCCTACAAATGCTGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD181256             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATATATTCAACGAACAAAGAAAAAAGCGTTTAAAACACTGAATAAAAGAGATTCAGATAGTCAAGAAGAAGCAGCTGTAACCACAATGGAAACACCTATATCAGATGGTAAAAAGAAACGTAAGAAAAAACGTCATTTAAATGGGAACATCACC     ACTACTACTACTACTACTACTACTACTACTACCAATACTACTGTTGTAGATGGTGTTTTGAATGATCAGAATGAAGTAATCAATCTTGATGAAGGTGAATTAGATCAACAAGACACNTG AATAAATCAATATCAGTTATTAAA                                                                                                                                                                                                                                    ]
[-] EMBL CD072902             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCTATATCAGATGGTAAAAAGAAACGTAAGAAAAAACGTCATTTAAATGGGAACATCACCAC  TACTACTACTACTACTACTACTACTACTACTACCAATACTACTGTTGTAGATGGTGTTTTGAATGATCAGAATGAAGTAATCAATCTTGATGAAGGTGAATTAGATCAACAAGACAC TGAAATAAATCAATATCAGTTATTAAATGATGGCAAAGAAGAGAAAAGTATA                                                                                                                                                                                                           ]
[-] EMBL CD181606             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GATGGTAAAAAGAAACGTAAGAAAAAACGTCATTTAAATGGGAACATCACCAC  TACTACTACTACTACTACTACTACTACTACTACCAATACTACTGTTGTAGATGGTGTTTTGAATGATCAGAATGAAGTAATCAATCTTGATGAAGGTGAATTAGATCAACAAGACAC TGAAATAAATCAATATCAGTTATTAAATGATGACAAAGAAGAGAAAAGTATAATAGGGAAGAAAAAGAAAAAACGTCATCATTCAGAATCGATTGAGATCGTAGAAAATTCAATGTTAACAAATGGTAATAGTATTTGTGTAGAAACGATGGAAACACCAGTATCATGTAAA                                                                                   ]
[+] EMBL CD137855             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AATGTGTCCAT  CCGC  AACTACTACTTCTACTGCTACTACTACTACTACCAATACTACTGTTGTAGATGGTGTTTTGAATGATCAGAATGAAGTAATCAATCTTGATGAAGGTGAATTAGATCAACAAGACAC TGAAATAAATCAATATCAGTTATTAAATGATGACAAAGAAGAGAAAAGTATAATAGGGAAGAAAAAGAAAAAACGTCATCATTCAGAATCGATTGAGATCGTAGAAAATTCAATGTTAACAAATGGTAATAGTATTTGTGTAGAAACGATGGAAACACCAGTATCATGTAAACGTAAACGATCAGCTTCTGAGTCAAGTATACT                                                   ]
[-] EMBL CD181405             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGGGAACATCACCAC  TACTACTACTACTACTACTACTACTACTACTACCAATACTACTGTTGTAGATTGTGTTTTGAATGATCAGAATGAAGTAATCAATCTTGATGAAGGTGAATTAGATCAACAAGACAC TGAAATAAATCAATATCAGTTATTAAATGATGACAAAGAAGAGAAAAGTATAATAGGGAAGAAAAAGAAAAAACGTCATCATTCAGAATCGATTGAGATCGTAGAAAATTCAATGTTAACAAATGGTAATAGTATTTGTGTAGAAACGATGGAAACACCAGTATCATGTAAA                                                                                   ]
[-] EMBL AI395389             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                acccggcCACCACTATACTACTACTACTACTACTACTACTACTACTACCAATACTACTGTTGTAGATGGTGTTTTGAATGATCAGAATGAAGTAATCAATCTTGATGAAGGTGAATTAGATCAACAAGACAC TGAAATAAATCAATATCAGTTATTAAATGATGACAAAGAAGAGAAAAGTATAATAGGGAAGAAAAAGAAAAAACGTCATCATTCAGAATCGATTGAGATCGTAGAAAATTCAATGTTAACAAATGGTAATAGTATTTGTGTAGAAACGATGGAAACACCAGTATCATGTAAACGTAAACGATCAGCTTCTGAGTCAAGTATACTTTTAGAGGATATGAAACCGGATAGTTTAAAAAAAAAAAAAAAAA       ]
[+] EMBL CD139816             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATAAATCAATATCAGTTATTAAATGATGACAAAGAAGAGAAAAGTATAATAGGGAAGAAAAAGAAAAAACGTCATCATTCAGAATCGATTGAGATCGTAGAAAATTCAATGTTAACAAATGGTAATAGTATTCGTGTAGAAACGATGGAAACACCAGTATCATGTAAACGTAAACGATCAGCTTCTGAGTCAAGTATACTTTTAGAGGATATGAAACCGGATAGTTTAAAAAAGAAGAAAAGGAAAAAAAG]
[-] EMBL CD072901             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATCGATTGAGATCGTAGAAAATTCAATGTTAACAAATGGTAATAGTATTTGTGTAGAAACGATGGAAACCCCAGTATCATGTAAACGTAAACGATCAGCTTTTGAGTCAAGTATACTTTTAGAGGATATGAAACC                                 ]




>consensus_10553#0
ATGTTTTGAAACTATGACGAAGGTCTTTATTCTGTATGAGCACGCGTTAGGATATGCTCT
GTTCAGAGTTAAAATCAAGTCAGTAGAAACTTCAGATGTTGTTACTGCGTTACAACAGTT
AGCTGCAGATCTTTTGAACAATGAAGAAGAGTTTATGAAATGCTTTAAATTGCATGCATT
TGTGCCTTTCTCTTCCTCAGCTAGTGCTCTACAAAATTGTAATGGGATATCAGAAGGCGT
TGTTCCACAGGAACTTAAAACGTTCATAGAGGAGAATTTACCTGCTTCTTCAGATGTTTT
GCTGTGCATCTCAGACCGGAAACTCGCTGAATCTCTTAAAGCGCCTGAAATCGGATTGCC
AGAAACTATTTCATGTTCCTCTGAATCCATCCTTCATGAAGTCTACCGGGCTCTCCGATT
TTACTTTCCTAAATATATCAAAGAGTTTTCTCATTTCGACGAATCAAAAGCTCAAATAGG
TTTGGGTCATAGTTATTCTAGAGCTAAAGTGAAATTCAATATATACAGAAATGACAATAT
GATTATTCAATCCATAAATTTACTAGACCAATTAGATAAAGATGTAAATAACTTTTGCAT
GCGTGTCAAAGAATGGTTCTCATATCATTTCCCAGAATTGTCAAAAATTGTTCCTGACAA
TCCAACTTTCGTTAAAGTAGTCGGTCTTATTCGCACTCGAGCTGGTGCAACAGAAGAAAA
TCTTGATGCATTGGAGGCCTTAACTAATAGTCAAGTTGCTTCAGATATCATTGAATCTGC
CAAGTCATCCGTTGGCTTTGATATTACGGATGATGATGCTGAGAATTTGGCAACATTCAC
TGAAAAAATTAACGCATTAATTGAACGTAGAAGACTAACACAAGAATATTTAGCTAAGAA
GCTTGCTGGTGTTGCTCCAAACTTGAGCACAATGATTGGGGATAGAGTAAGTGCAAGGCT
AATTGCTCATGCGGGATCCCTTACGAACTTGGCTAAATTCCCTGCCTCGACAATTCAGAT
ATTGGGGGCGGAAAAAGCGTTATTCAGAGCATTACGATCACGTGGTGCTACACCAAAGTA
CGGATTGATTTACCATAGTCATTTATCGCTCGTGCTGCGCGAGAAAACAAGGGAAAAATC
TCTAGATTTTTGGCTGCAAAATGTGCTATAGCCTCTCGGATCGACTGCTTTAGTGAAGTG
CTTTGTGATATCTATGGGAGACATTTGAAGCAACAAATTGAGGATAGATTGAATTATTTT
GAGACTGGTACTACGCCTCCTACAAATGCTGAAGCTATGGCGCGCGCAATCGCCGAGGTA
AATAAATATATTCAACGAACAAAGAAAAAAGCGATTAAAACACTGAATAAAAGAGATTCA
GATAGTCAAGAAGAAGCAGCTGTAACCACAATGGAAACACCTATATCAGATGGTAAAAAG
AAACGTAAGAAAAAACGTCATTTAAATGGGAACATCACCACTACTACTACTACTACTACT
ACTACTACTACTACCAATACTACTGTTGTAGATGGTGTTTTGAATGATCAGAATGAAGTA
ATCAATCTTGATGAAGGTGAATTAGATCAACAAGACACTGAAATAAATCAATATCAGTTA
TTAAATGATGACAAAGAAGAGAAAAGTATAATAGGGAAGAAAAAGAAAAAACGTCATCAT
TCAGAATCGATTGAGATCGTAGAAAATTCAATGTTAACAAATGGTAATAGTATTTGTGTA
GAAACGATGGAAACACCAGTATCATGTAAACGTAAACGATCAGCTTCTGAGTCAAGTATA
CTTTTAGAGGATATGAAACCGGATAGTTTAAAAAAAAAAAAAAAAAAAAAAAG

consensusID : consensus_10553#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 295
fasta sequence

                              [CCGTGGCTTACAAATGCTGAAGCTATGGCGCGCGCAATCGCCGAGGTAAATAAATATATTCAACGAACAAAGAAAAAAGCGATTAAAACACTGAATAAAAGAGATTCAGATAGTCAAGAAGAAGCAGCTGTAACCACAATGGAAACACCTATATCAGGTGGTAAAAAGAAACGTAAGAAAAAACGTCATTTAAATGGGAACATCACCACTACTGCTACTACTACTACCAATACTACTGTTGTAGATGGTGTTTTGAATGATCAGAATGAAGTAATCAATCTTGATGAAGGTGAAT]

[-] EMBL CD165749             [CCGTGGCTTACAAATGCTGAAGCTATGGCGCGCGCAATCGCCGAGGTAAATAAATATATTCAACGAACAAAGAAAAAAGCGATTAAAACACTGAATAAAAGAGATTCAGATAGTCAAGAAGAAGCAGCTGTAACCACAATGGAAACACCTATATCAGGTGGTAAAAAGAAACGTAAGAAAAAACGTCATTTAAATGGGAACATCACCACTACTGCTACTACTACTACCAATACTACTGTTGTAGATGGTGTTTTGAATGATCAGAATGAAGTAATCAATCTTGATGAAGGTGAAT]




>consensus_10553#1
CCGTGGCTTACAAATGCTGAAGCTATGGCGCGCGCAATCGCCGAGGTAAATAAATATATT
CAACGAACAAAGAAAAAAGCGATTAAAACACTGAATAAAAGAGATTCAGATAGTCAAGAA
GAAGCAGCTGTAACCACAATGGAAACACCTATATCAGGTGGTAAAAAGAAACGTAAGAAA
AAACGTCATTTAAATGGGAACATCACCACTACTGCTACTACTACTACCAATACTACTGTT
GTAGATGGTGTTTTGAATGATCAGAATGAAGTAATCAATCTTGATGAAGGTGAAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10553#0      ATGTTTTGAAACTATGACGAAGGTCTTTATTCTGTATGAGCACGCGTTAGGATATGCTCT 60
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      GTTCAGAGTTAAAATCAAGTCAGTAGAAACTTCAGATGTTGTTACTGCGTTACAACAGTT 120
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      AGCTGCAGATCTTTTGAACAATGAAGAAGAGTTTATGAAATGCTTTAAATTGCATGCATT 180
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      TGTGCCTTTCTCTTCCTCAGCTAGTGCTCTACAAAATTGTAATGGGATATCAGAAGGCGT 240
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      TGTTCCACAGGAACTTAAAACGTTCATAGAGGAGAATTTACCTGCTTCTTCAGATGTTTT 300
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      GCTGTGCATCTCAGACCGGAAACTCGCTGAATCTCTTAAAGCGCCTGAAATCGGATTGCC 360
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      AGAAACTATTTCATGTTCCTCTGAATCCATCCTTCATGAAGTCTACCGGGCTCTCCGATT 420
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      TTACTTTCCTAAATATATCAAAGAGTTTTCTCATTTCGACGAATCAAAAGCTCAAATAGG 480
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      TTTGGGTCATAGTTATTCTAGAGCTAAAGTGAAATTCAATATATACAGAAATGACAATAT 540
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      GATTATTCAATCCATAAATTTACTAGACCAATTAGATAAAGATGTAAATAACTTTTGCAT 600
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      GCGTGTCAAAGAATGGTTCTCATATCATTTCCCAGAATTGTCAAAAATTGTTCCTGACAA 660
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      TCCAACTTTCGTTAAAGTAGTCGGTCTTATTCGCACTCGAGCTGGTGCAACAGAAGAAAA 720
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      TCTTGATGCATTGGAGGCCTTAACTAATAGTCAAGTTGCTTCAGATATCATTGAATCTGC 780
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      CAAGTCATCCGTTGGCTTTGATATTACGGATGATGATGCTGAGAATTTGGCAACATTCAC 840
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      TGAAAAAATTAACGCATTAATTGAACGTAGAAGACTAACACAAGAATATTTAGCTAAGAA 900
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      GCTTGCTGGTGTTGCTCCAAACTTGAGCACAATGATTGGGGATAGAGTAAGTGCAAGGCT 960
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      AATTGCTCATGCGGGATCCCTTACGAACTTGGCTAAATTCCCTGCCTCGACAATTCAGAT 1020
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      ATTGGGGGCGGAAAAAGCGTTATTCAGAGCATTACGATCACGTGGTGCTACACCAAAGTA 1080
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      CGGATTGATTTACCATAGTCATTTATCGCTCGTGCTGCGCGAGAAAACAAGGGAAAAATC 1140
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      TCTAGATTTTTGGCTGCAAAATGTGCTATAGCCTCTCGGATCGACTGCTTTAGTGAAGTG 1200
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      CTTTGTGATATCTATGGGAGACATTTGAAGCAACAAATTGAGGATAGATTGAATTATTTT 1260
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      GAGACTGGTACTACGCCTCCTACAAATGCTGAAGCTATGGCGCGCGCAATCGCCGAGGTA 1320
consensus_10553#1      ------------CCGTGGCTTACAAATGCTGAAGCTATGGCGCGCGCAATCGCCGAGGTA 48
                                    **   * ****************************************

consensus_10553#0      AATAAATATATTCAACGAACAAAGAAAAAAGCGATTAAAACACTGAATAAAAGAGATTCA 1380
consensus_10553#1      AATAAATATATTCAACGAACAAAGAAAAAAGCGATTAAAACACTGAATAAAAGAGATTCA 108
                       ************************************************************

consensus_10553#0      GATAGTCAAGAAGAAGCAGCTGTAACCACAATGGAAACACCTATATCAGATGGTAAAAAG 1440
consensus_10553#1      GATAGTCAAGAAGAAGCAGCTGTAACCACAATGGAAACACCTATATCAGGTGGTAAAAAG 168
                       ************************************************* **********

consensus_10553#0      AAACGTAAGAAAAAACGTCATTTAAATGGGAACATCACCACTACTACTACTACTACTACT 1500
consensus_10553#1      AAACGTAAGAAAAAACGTCATTTAAATGGGAACATCACCACTACTGCTAC---------- 218
                       ********************************************* ****          

consensus_10553#0      ACTACTACTACTACCAATACTACTGTTGTAGATGGTGTTTTGAATGATCAGAATGAAGTA 1560
consensus_10553#1      -----TACTACTACCAATACTACTGTTGTAGATGGTGTTTTGAATGATCAGAATGAAGTA 273
                            *******************************************************

consensus_10553#0      ATCAATCTTGATGAAGGTGAATTAGATCAACAAGACACTGAAATAAATCAATATCAGTTA 1620
consensus_10553#1      ATCAATCTTGATGAAGGTGAAT-------------------------------------- 295
                       **********************                                      

consensus_10553#0      TTAAATGATGACAAAGAAGAGAAAAGTATAATAGGGAAGAAAAAGAAAAAACGTCATCAT 1680
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      TCAGAATCGATTGAGATCGTAGAAAATTCAATGTTAACAAATGGTAATAGTATTTGTGTA 1740
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      GAAACGATGGAAACACCAGTATCATGTAAACGTAAACGATCAGCTTCTGAGTCAAGTATA 1800
consensus_10553#1      ------------------------------------------------------------
                                                                                   

consensus_10553#0      CTTTTAGAGGATATGAAACCGGATAGTTTAAAAAAAAAAAAAAAAAAAAAAAG 1853
consensus_10553#1      -----------------------------------------------------