cluster # 10558

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Schistosoma mansoni
cluster # 10558 cluster # 10558 Sequences # 18 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10558#0 length = 1438 sequences # 14

consensus_10558#1 length = 738 sequences # 4

consensusID : consensus_10558#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1438
fasta sequence

                              [GTTTTTACATTGACATTGTGTCTATGATTGGACTGTGTGTAATTTGGAACCGCTGAAATCAAGATCAGCTGGGGTTTCATTTTGCATCATTAACTCATGTAAATATCGACTATCAGTTGCATTTGTATGTGCAGGATGAATTGAGTGTCGTGAAACAGACGTGGACAAATTTGGTGTATTTCCACTACTATTAGAACCACGTTGATTTGCTTCATTTAATAAAAGCCATGATTGATAAACAGCTTCAAGAGACTGTAAATTTCTCAATGAATTGGCAGATGAGGAGTGATGTAACTGTTCTCTAGATTTTAGATCACCACTAGGTTCCGAGGTCATTTTCTCAAGGCTCTCAATACGTTGTAAAAGGAGGGGGATTAGTTGACGTGCTATCGTATTTTCTTGTTTAAGACTTTCCATTCTTGAAACAGCTTCACGTAACTCCATAATGTAACTAACTGAAAATCGAAGAACACTACCTTTATTTCGTCGACCGTCTACATCCCGATACAGTTCCGGTGGGAGTAAACTACTGAGATAGACGATTTGTGAATTAATATAATCTCTTCGCTTCCGTTCAATTCTGTTATGACTCTCTTTTTTTGAACGTTGCTTTTGACTGACAGCTTTAGCGGGATCTTGAACTGGATGATTAGTCAATACTGGAGGTGTACTGAATAGATTCGAACTTGAAGAGCTATTCGGAGAGCAAAAGGCTTGATGGGGTGCAGAACTAGAAGTGGTAGTGGCTGAAAGTGAAGGTGCATAGATTGGTACTGGAGCAGTAGTTGGGGAATGAGAATTAGGTAAAAGCATTCCTAAACGTGTATTCTGTACATCGGAAGGACAGCATCCAGATTGAGTGGCAGGACTTAATACGATGGAACGAGATTTATTTGACGTAGAGGAGCTGGAATAATTGGTAGAATATGCATAGTGTGAATTATTTTTCTGATGACAATCCATTAAATCAGTGGTTGTAGGCATTGAACTAGC-GGGAGAAGAGCTAACCATACCGCTATAAGTGGCAGTTGAACCTGGGATCAATGGAATTAAATGTCCGGGTTGTCCGTGGAAGGAAGAAGCCTGTGGCTGGTTGTGAACTGATGTGTTCCCAAAGGGCTGCCATGCGAAAACTGAATGTGGAGCCATATTAGGCGTTCCTTTACTGATTGGAGCGCTTGAACTGCCTTCTAAAGATGGC-AGACGTTGTCCATAGTCAAAGGAAGTCAAATCTGATATACTGTGTACCTCTGGACTCAGGTGTGAAGTTTGAGGACTAGTTGCGTCAACCGAAGCACCTTGTTGCCTGAGCATATTAACCCAGTTTGGTCCAGACTTGTCAAAACTCTGGTACTGATGACAT-CCTGGGTCACCAAAACCTTCATGTGTGTGATGATGATCTGTAACAACCCCTTCATCAAATTCCTCATCCATATCA]

[+] EMBL CD163105             [GTTTTTACATTGACATTGTGTCTATGATTGGACTGTGTGTAATTTGGAACCGCTGAAATCAAGATCAGCTGGGGTTTCATTTTGCATCATTAACTCATGTAAATATCGACTATCAGTTGCATTTGTATGTGCAGGATGAATTGAGTGTCGTGAAACAGACGTGGACAAATTTGGTGTATTTCCACTACTATTAGAACCACGTTGATTTGCTTCATTTAATAAAAGCCATGATTGATAAACAGCTTCAAGAGACTGTAAATTTCTCAATGAATTGGCAGATGAGGAGTGATGTAACTGTTCTCTAGATTTTAGATCACCACTAGGTTCCGAGGTCATTTTCTCAAGGCTCTCAATACGTTGTAAAAGGAGGGGGATTAGTTGACGTGCTATCGTATATTCTTGTTTAAGACTTTCCATTCTTGAAACAGCTTCACGTAACTCCATAATGTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD096486             [                                                 CCGCTGAAATCAAGATCAGCTGGGGTTTCATTTTGCATCATTAACTTATGTAAATATCGACTATCAGTTGCATTTGTATGTGCAGGATGAATTGAGTGTCGTGAAACAGATGTGGACAAATTTGGTGTATTTCCACTACTATTAGAACCACGTTGATTTGCTTCATTTAATAAAAGCCATGATTGATAAACAGCTTCAAGAGACTGTAAATTTCTCAATGAATTGGCAGATGAGGAGTGATGTAACTGTTCTCTAGATTTTAGATCACCACTAGGTTCCGAGGTCATTTTCTCAAGGCTCTCAATACGTTGTAAAAGGAGGGGGATTAGTTGACGTGCTATCGTATTTTCTTGTTTAAGACTTTCCATTCTTGAAACAGCTTCACGTAACTCCATAATGTAACTAACTGAAAATCGAAGAACACTACCTTTATTTCGTCGACCGTCTACATCCCGATACAGTTCCGGTGGGAGTAAACTACTGAGATAGACGATTTGTGAATTAATATAATCTCTTCGCTTCCGTTCAATTCTGTTATGACTCTCTTTTTTTGAACGTTGCTTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD096452             [                                                                                                                                                                                                                                          ATAANCAGCTTCAAGAGACTGTAAATTTCTCAATGAATTGGCAGATGAGGAGTGATGTAACTGTTCTCTAGATTTTAGATCACCACTAGGTTCCGAGGTCATTTTCTCAAGGCTCTCAATACGTTGTAAAAGGAGGGGGATTAGTTGACGTGCTATCGTATTTTCTTGTTTAAGACTTTCCATTCTTGAAACAGCTTCACGTAACTCCATAATGTAACTAACTGAAAGTCGAAGAACACTACCTTTATTTCGTCGACCGTCTACATCCCGATACAGTTCCGGTGGGAGTAAACTACTGAGATAGACGATTTGTGAATTAATATAATCTCTTCGCTTTCGCTCAATTCTGTTATGACTCTCTTTTTTTGAACGTTGCTTTTGACTGACAGCTTTAGCGGGATCTTGAACTGGATGATTAGTCAATACTGGAGGTGTACTGAATAGATTCGAACTTGAAGAGCTATTCGGAGAGCAAAAGGCTTGATGGGGTGCAGAACTAGAAGTGGTAGTGGCTGAAAGTGAAGGTGCATAGATTGGTACTGGAGCAGTAGTTGGGGAATGAGAATTAGGTAAAAGCATTCCTAAACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD199198             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACTGAGATAGACGATTTGTGAATTAATATAATCTCTTCGCTTTCGTTCAATTCTGTTATGACTCTCTTTTTTTGAACGTTGCTTTTGACTGACAGCTTTAGCGGGATCTTGAACTGGATGATTAGTCAATACTGGAGGTGTACTGAATAGATTCGAACTTGAAGAGCTATTCGGAGAGCAAAAGGCTTGATGGGGTGCAGAACTAGAAGTGGTAGTGGCTGAAAGTGAAGGTGCATAGATTGGTACTGGAGCAGTAGTTGGGGAATGAGAATTA GTAANAGCATTCCTAAcg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD070503             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACTGAGATAGACGATTTGTGAATTAATATAATCTCTTCGCTTCCGTTCAATTCTGTTATGACTCTCTTTTTTTGAACGTTGCTTTTGACTGACAGCTTTAGCGGGATCTTGAACTGGATGATTAGTCAATACTGGAGGTGTACTGAATAGATTCGAACTTGAAGAGCTATTCGGAGAGCAAAAGGCTTGATGNGGTGCAGAACTAGAAGcg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD070513             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTGAGATAGACGATTTGTGAATTAATATAATCTCTTCGCTTCCGTTCAATTCTGTTATGACTCTCTTTTTTTGAACGTTGCTTTTGACTGACAGCTTTAGCGGGATCTTGAACTGGATGATTAGTCAATACTGGAGGTGTACTGAATAGATTCGAACTTGAAGAGCTATTCGGAGAGCAAAAGGCTTGATGGGGTGCAGAACTAGAAGTGGTAGTGGCTGAAAGTGAAGGTGCATAGATTGGTACTGGAGCAGTAGTTGGGGAATGAGAATTAGGTAAAAGCATTCCTAAACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD070471             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTGAGATAGACGATTTGTGAATTAATATAATCTCTTCGCTTCCGTTCAATTCTGTTATGACTCTCTTTTTTTGAACGTTGCTTTTGACTGACAGCTTTAGCGGGATCTTGAACTGGATGATTAGTCAATACTGGAGGTGTACTGAATAGATTCGAACTTGAAGAGCTATTCGGAGAGCAAAAGGCTTGATGGGGTGCAGAACTAGAAGTGGTAGTGGCTGAAAGTGAAGGTGCATAGATTGGTACTGGAGCAGTAGTTGGGGAATGAGAATTAGGTGAAAGCATTCCTAGACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD096382             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACTGACAGCTTTAGCGGGATCTTGAACTGGATGATTAGTCAATGCTGGAGGTGTACTGAATAGATTCGAACTTGAAGAGCTATTCGGAGAGCAAAAGGCTTGATGGGGTGCAGAACTAGAAGTGGTAGTGGCTGAAAGTGAAGGTGCATAGATTGGTACTNNNCCAGTAGTTGGGGAATGAGAAATAGGTAAGAGCATTCCTAAGCGTGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD188196             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCAATACTGGAGGTGTACTGAATAGATTCGAACTTGAAGAGCTATTCGGAGAGCAAAAGGCTTGATGGGGTGCAGAACTAGAAGTGGTAGTGGCTGAAAGTGAAGGTGCATAGATTGGTACTGGAGCAGTAGTTGGGGAATGAGAATTAGGTAAAAGCATTCCTAAACGTGTATTCTGTACATCGGAAGGACAGCATCCAGATTGAGTGGCAGGACTTAATACGATGGAACGAGATTTATTTGACGTAGAGGAGCTGGAATAATTGGTAGAATATGCATAGTGTGAATTATTTTTCTGATGACAATCCATTAAATCAGTGGTTGTAGGCATTGAACTAGCGGGGAGAAGAGCTAACCATACCG                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD093304             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TACTGGAGGTGTACTGAATAGATTCGAACTTGAAGAGCTATTCGGAGAGCAAAAGGCTTGATGGGGTGCAGAACTAGAAGTGGTAGTGGCTGAAAGTGAAGGTGCATAGATTGGTACTGGAGCAGTAGTTGGGGAATGAGAATTAGGTAAAAGCATTCCTAAACGTGTATTCTGTACATCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD117025             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGCAGTAGTTGGGGAATGAGAATTAGGTAAAAGCATTCCTAAACGTGTATTCTGTACATCGGAAGGACAGCATCCAGATTGAGTGGCAGGGCTTAATACGATGGAACGAGATTTATTTGACGTAGAGGAGCTGGAATAATTGGTAGAATATGCATAGTGTGAATTATTTTTCTGATGACAATCCATTAAATCAGTGGTTGTAGGCATTGAACTAGC GGGAGAAGAGCTAACCATACCGCTATAAGTGGCAGTTGAACCTGGGATCAATGGAATTAAATGTCCGGGTTGTCCGTGGAAGGAAGAAGCCTGTGGCCGGTTGTGAACTGATGTGTTCCCAAAGGGCTGCCATGCGAAAACTGAATGTGGAGCCATATTAGGCGTTCCTTTACTGATTGGAGCGCTTGAACTGCCTTCTAAAGATGGC AGACGTTGTCCATAGTCAAAGGAAGTCAAATCTGATATACTGTGTACCTCTGGACTCAGGTGTGAAGTTTGAGGACTAGTTGCGTCAACCGAAGCACCTTGTTGCCTGAGCATATTAACCCAGTTTGGTCCAGACTTGTCAAAACTCTGGTACTGATGACAT CCTGNGTCACCAAAACCTTCATGTGTGTGATGATGATCTGTAACAACCCCTTCATCAAATTCCT           ]
[-] EMBL CD069364             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTACATCGGAAGGACAGCATCCAGATTGAGTGCCAGGACTTAATACGATGGAACGAGATTTATTTGGCGTAGAGGAGCTGGAATAATTGGTAGAATATGCATAGTGTGAATTATTTTTCTGATGACAATCCATTAAATCAGTGGTTGTAGGCATTGAACTAGC GGGAGAAGAGCTAACCATACCGCTATAAGTGGCAGTTGAACCTGGGATCAATGGAATTAAATGTCCGGTTTGTCCGTGGAAGGAAGAAGCCTGTGGCTGGTTGTGAACTGATGTGTTCCCAAAGGGCTGCCATGCGAAAACTGAATGTGGAGCCATATTAGGCGTTCCTTTACTGATTGGAGCGCTTGAACTGCCTTCTAAAGATGGC AGACGTTGTCCATAGTCAAAGGAAGTCAAATCTGATATACTGTGTACCTCTGGACTCAGGTGTGAAGTTTGAGGACTAGTTGCGTCAACCGAAGCACCTTGTTGCCTGAGCATATTAACCCAGTTTGGTCCAGACTTGTCAAAACTCTGGTACTGATGACATACCTGGGTCACCAAAACCTTCATGTGTGTGcggcatc                                       ]
[-] EMBL CD177819             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGAAGGAAGAAGCCTGTGGCTGGTTGTGAACTGATGTGTTCCCAAAGGGCTGCCATGCGAAAACTGAATGTGGAGCCATATTAGGCGTTCCTTTACTGATTGGAGCGCTTGAACTGCCTTTTAAAGATGGCAAGACGTTGTCCATAGTCAAAG                                                                                                                                                                                                                         ]
[+] EMBL CD122995             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGAAGAAGCCTGTGGCTGGTTGTGAACTGATGTGTTCCCAAAGGGCTGCCATGCGAAAACTGAATGTGGAGCCATATTAGGCGTTCCTTTACTGATTGGAGCGCTTGAACTGCCTTCTAAAGATGGC AGACGTTGTCCATAGTCAAAGGAAGTCAAATCTGATATACTGTGTACCTCTGGACTCAGGTGTGAAGTTTGAGGACTAGTTGCGTCAACCGAAGCACCTTGTTGCCTGAGCATATTAACCCAGTTTGGTCCAGACTTGTCAAAACTCTGGTACTGATGACAT CCTGGGTCACCAAAACCTTCATGTGTGTGATGATGATCTGTAACAACCCCTTCATCAAATTCCTCATCCATATCA]




>consensus_10558#0
GTTTTTACATTGACATTGTGTCTATGATTGGACTGTGTGTAATTTGGAACCGCTGAAATC
AAGATCAGCTGGGGTTTCATTTTGCATCATTAACTCATGTAAATATCGACTATCAGTTGC
ATTTGTATGTGCAGGATGAATTGAGTGTCGTGAAACAGACGTGGACAAATTTGGTGTATT
TCCACTACTATTAGAACCACGTTGATTTGCTTCATTTAATAAAAGCCATGATTGATAAAC
AGCTTCAAGAGACTGTAAATTTCTCAATGAATTGGCAGATGAGGAGTGATGTAACTGTTC
TCTAGATTTTAGATCACCACTAGGTTCCGAGGTCATTTTCTCAAGGCTCTCAATACGTTG
TAAAAGGAGGGGGATTAGTTGACGTGCTATCGTATTTTCTTGTTTAAGACTTTCCATTCT
TGAAACAGCTTCACGTAACTCCATAATGTAACTAACTGAAAATCGAAGAACACTACCTTT
ATTTCGTCGACCGTCTACATCCCGATACAGTTCCGGTGGGAGTAAACTACTGAGATAGAC
GATTTGTGAATTAATATAATCTCTTCGCTTCCGTTCAATTCTGTTATGACTCTCTTTTTT
TGAACGTTGCTTTTGACTGACAGCTTTAGCGGGATCTTGAACTGGATGATTAGTCAATAC
TGGAGGTGTACTGAATAGATTCGAACTTGAAGAGCTATTCGGAGAGCAAAAGGCTTGATG
GGGTGCAGAACTAGAAGTGGTAGTGGCTGAAAGTGAAGGTGCATAGATTGGTACTGGAGC
AGTAGTTGGGGAATGAGAATTAGGTAAAAGCATTCCTAAACGTGTATTCTGTACATCGGA
AGGACAGCATCCAGATTGAGTGGCAGGACTTAATACGATGGAACGAGATTTATTTGACGT
AGAGGAGCTGGAATAATTGGTAGAATATGCATAGTGTGAATTATTTTTCTGATGACAATC
CATTAAATCAGTGGTTGTAGGCATTGAACTAGCGGGAGAAGAGCTAACCATACCGCTATA
AGTGGCAGTTGAACCTGGGATCAATGGAATTAAATGTCCGGGTTGTCCGTGGAAGGAAGA
AGCCTGTGGCTGGTTGTGAACTGATGTGTTCCCAAAGGGCTGCCATGCGAAAACTGAATG
TGGAGCCATATTAGGCGTTCCTTTACTGATTGGAGCGCTTGAACTGCCTTCTAAAGATGG
CAGACGTTGTCCATAGTCAAAGGAAGTCAAATCTGATATACTGTGTACCTCTGGACTCAG
GTGTGAAGTTTGAGGACTAGTTGCGTCAACCGAAGCACCTTGTTGCCTGAGCATATTAAC
CCAGTTTGGTCCAGACTTGTCAAAACTCTGGTACTGATGACATCCTGGGTCACCAAAACC
TTCATGTGTGTGATGATGATCTGTAACAACCCCTTCATCAAATTCCTCATCCATATCA

consensusID : consensus_10558#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 738
fasta sequence

                              [GGAAGAAGCCTGTGGCTGGTTGTGAACTGATGTGTTCCCAAAGGTTGCCAAGCACCACCACAAATACCTAATGTTTATTTGACCGGGTGTGTAGCTCAGTTATTACGTTTCCTGTCGGAGGACGTAGTGCCAAATGTACGGATTTGTGCAACACAAGCCCTCCACGTAATCTCCGGTTCTCTGGATAAAAAAACTATTCAAAATGATGTGATACCGGTTTTAAAAAAAGTTATAGATTATGATTTTGATCAGGATGTTCGTTTTTTTGCACAACAAAGTTTAAACTATTTTACAGCTACCTAATGTTTATGCGTATATATTCTTCTAATTCTGTGAATTTAGTAAGTTTATAGAAGAAGAAGACGAAGAATCTATTTCAGTCATCATCGTATGGGATAATAATGATATGATGATGAGCTGTGACTTATTTAAGGAAGCGAAAACGATTCTGTCTGTTTGTTTTTCTTGTTCATGGGTCATTATTGTGTTAGTCTCCTTTCTTTTCTTTTTTCC-TTTTTTTCTTCTTCTAAACAAAACAATCAATGTTCCAACATCTCTCTTTTACAGTTTTGCTTATTCCATTAATGTTGCATTCTATCTATACACTTGTTTCTCTCTCTCTCTTTGTTTACTTTTTCCGAATTGTAATAACATTTAGTTACTATCTGGAAAACAAACAAACAAACATACTACTCACTTGTTTGTTTG-TTATATATAAAAATTTTTTTTTGTTTTTTT]

[+] EMBL CD161297             [GGAAGAAGCCTGTGGCTGGTTGTGAACTGATGTGTTCCCAAAGGTTGCCAAGCACCACCACAAATACCTAATGTTTATTTGACCGGGTGTGTAGCTCAGTTATTACGTTTCCTGTCGGAGGACGTAGTGCCAAATGTACGGATTTGTGCAACACAAGCCCTCCACGTAATCTCCGGTTCTCTGGATAAAAAAACTATTCAAAATGATGTGATACCGGTTTTAAAAAAAGTTATAGATTATGATTTTGATCAGGATGTTCGTTTTTTTGCACAACAAAGTTTAAACTATTTTACAGCTACCTAATGTTTATGCGTATATATTCTTCTAATTCTGTGAATTTAGTAAGTTTATAGAAGAAGAAGACGAAGAATCTATTTCAGTCATCATCGTATGGGATAATAATGATATGATGATGAGCTGTGACTTATTTAAGGAAGCGAAAACGATTCTGTCTGTTTGTTTTTCTTGTTCATGGGTCATTATTGTGTTAGTCTCCTTTCTTTTCTTTTTTCCTTTTTTTTCTTCTTCTANACAAAACA                                                                                                                                                                                                         ]
[-] EMBL CD164846             [                                                                                                                                                                                                            GATGTGATACCGG TTTAAAAAAAGTTATAGATTATGATTTTGATCAGGATGTTCGTTTTTNTGCACAACAAAGTTTAAACTATTTTACAGCTACCTAATGTTTATGCGTATATATTCTTCTAATTCTGTGAATTTAGTAAGTTTATAGAAGAAGAAGACGAAGAATCTATTTCAGTCATCATCGTATGGGATAATAATGATATGATGATGAGCTGTGACTTATTTAAGGAAGCGAAAACGATTCTGTCTGTTTGTTTTTTTTGTTCATGGGTCATTATTGTGTTAGTCTCCTTTCTTTTCTTTTTTCC TTTTTTTCTTCTTCTAAACAAAACAATCAATGTTCCAACATCTCTCTTTTACAGTTTTGCTTATTCCATTAATGTTGCATTCTATCTATACACTTGTTTCTCTCTCTCTCTTTGTTTACTTTTTCCGAATTGTAATAACATTTAGTTACTATCTGGAAAACAAACAAACAAACATACTACTCACTTGTTTGTTTG TTATATATAAAAATTTTTTTTTGTTTTTTT]
[-] EMBL CD155825             [                                                                                                                                                                                                                                                                      TTTTTGCACAACAAAGTTTAAACTATTTTACAGCTACCTAATGTTTATGCGTATATATTCTTCTAATTCTGTGAATTTAGTAAGTTTATAGAAGAAGAAGACGAAGAATCTATTTCAGTCATCATCGTATGGGATAATAATGATATGATGATGAGCTGTGACTTATTTAAGGAAGCGAAAACGATTCTGTCTGTTTGTTTTTCTTGTTCATGGGTCATTAT                                                                                                                                                                                                                                                                 ]
[-] EMBL CD139052             [                                                                                                                                                                                                                                                                        TTTGCACAACAAAGTTTAAACTA TTTACAGCTACCTAATGTTTATGCGTATATATTCTTCTAATTCTGTGAATTTAGTAAGTTTATAGAAGAAGAAGACGAAGAATCTATTTCAGTCATCATCGTATGGGATAATAATGATATGATGATGAGCTGTGACTTATTTAAGGAAGCGAAACCGATTCTGTCTGTTTGTTTTTCTTGTTCATGGGTCATTATTGTGTTAGTCTCCTTTCTTTTCTTTTTTCC TTTTTTTCTTCTTCTAAACAAAACAATCAATGTTCCAACATCTCTCTTTTACAGTTTTGCTTATTCCATTAATGTTGCATTCTATCTATACACTTGTTTCTCTCTCTCTCTTTGTTTACTTTTTCCGAATTGTAATAACATTTAGTTACTATCTGGAAAACAAACAAACAAACATACTACTCACTTGTTTGTTTGTTTATATATAAAAATTTTTTTTTGTTTTTTT]




>consensus_10558#1
GGAAGAAGCCTGTGGCTGGTTGTGAACTGATGTGTTCCCAAAGGTTGCCAAGCACCACCA
CAAATACCTAATGTTTATTTGACCGGGTGTGTAGCTCAGTTATTACGTTTCCTGTCGGAG
GACGTAGTGCCAAATGTACGGATTTGTGCAACACAAGCCCTCCACGTAATCTCCGGTTCT
CTGGATAAAAAAACTATTCAAAATGATGTGATACCGGTTTTAAAAAAAGTTATAGATTAT
GATTTTGATCAGGATGTTCGTTTTTTTGCACAACAAAGTTTAAACTATTTTACAGCTACC
TAATGTTTATGCGTATATATTCTTCTAATTCTGTGAATTTAGTAAGTTTATAGAAGAAGA
AGACGAAGAATCTATTTCAGTCATCATCGTATGGGATAATAATGATATGATGATGAGCTG
TGACTTATTTAAGGAAGCGAAAACGATTCTGTCTGTTTGTTTTTCTTGTTCATGGGTCAT
TATTGTGTTAGTCTCCTTTCTTTTCTTTTTTCCTTTTTTTCTTCTTCTAAACAAAACAAT
CAATGTTCCAACATCTCTCTTTTACAGTTTTGCTTATTCCATTAATGTTGCATTCTATCT
ATACACTTGTTTCTCTCTCTCTCTTTGTTTACTTTTTCCGAATTGTAATAACATTTAGTT
ACTATCTGGAAAACAAACAAACAAACATACTACTCACTTGTTTGTTTGTTATATATAAAA
ATTTTTTTTTGTTTTTTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10558#0      GTTTTTACATTGACATTGTGTCTATGATTGGACTGTGTGTAATTTGGAACCGCTGAAATC 60
consensus_10558#1      ------------------------------------------------------------
                                                                                   

consensus_10558#0      AAGATCAGCTGGGGTTTCATTTTGCATCATTAACTCATGTAAATATCGACTATCAGTTGC 120
consensus_10558#1      ------------------------------------------------------------
                                                                                   

consensus_10558#0      ATTTGTATGTGCAGGATGAATTGAGTGTCGTGAAACAGACGTGGACAAATTTGGTGTATT 180
consensus_10558#1      ------------------------------------------------------------
                                                                                   

consensus_10558#0      TCCACTACTATTAGAACCACGTTGATTTGCTTCATTTAATAAAAGCCATGATTGATAAAC 240
consensus_10558#1      ------------------------------------------------------------
                                                                                   

consensus_10558#0      AGCTTCAAGAGACTGTAAATTTCTCAATGAATTGGCAGATGAGGAGTGATGTAACTGTTC 300
consensus_10558#1      ------------------------------------------------------------
                                                                                   

consensus_10558#0      TCTAGATTTTAGATCACCACTAGGTTCCGAGGTCATTTTCTCAAGGCTCTCAATACGTTG 360
consensus_10558#1      ------------------------------------------------------------
                                                                                   

consensus_10558#0      TAAAAGGAGGGGGATTAGTTGACGTGCTATCGTATTTTCTTGTTTAAGACTTTCCATTCT 420
consensus_10558#1      ------------------------------------------------------------
                                                                                   

consensus_10558#0      TGAAACAGCTTCACGTAACTCCATAATGTAACTAACTGAAAATCGAAGAACACTACCTTT 480
consensus_10558#1      ------------------------------------------------------------
                                                                                   

consensus_10558#0      ATTTCGTCGACCGTCTACATCCCGATACAGTTCCGGTGGGAGTAAACTACTGAGATAGAC 540
consensus_10558#1      ------------------------------------------------------------
                                                                                   

consensus_10558#0      GATTTGTGAATTAATATAATCTCTTCGCTTCCGTTCAATTCTGTTATGACTCTCTTTTTT 600
consensus_10558#1      ------------------------------------------------------------
                                                                                   

consensus_10558#0      TGAACGTTGCTTTTGACTGACAGCTTTAGCGGGATCTTGAACTGGATGATTAGTCAATAC 660
consensus_10558#1      ----------------------------------------------------------GG 2
                                                                                   

consensus_10558#0      TGGAGGTGTACTGAATAGATTCGAACTTGAAGAGCTATTCGGAGAGCAAAAGGCTTGATG 720
consensus_10558#1      AAGAAGCCTG-TGGCTGGTTGTGAACT----GATGTGTTC------CCAAAGGTT----G 47
                         ** *  *  **  * * *  *****    **  * ***      * ***** *    *

consensus_10558#0      GGGTGCAGAACTAGAAGTGG-TAGTGGCTGAAAGTGAAGGTGCATAGATTGGT-ACTGGA 778
consensus_10558#1      CCAAGCACCACCACAAATACCTAATGTTTATTTGACCGGGTGTGTAGCTCAGTTATTACG 107
                           ***  ** * ** *   ** **  *    *    ****  *** *  ** * *   

consensus_10558#0      GCAGTAGTTGGGGAATG-AGAATTAGGTAAAAGCATTCCTA-AACGTGTATTCTGTACAT 836
consensus_10558#1      TTTCCTGTCGGAGGACGTAGTGCCAAATGTACGGATTTGTGCAACACAAGCCCTCCACGT 167
                             ** ** * * * **    *  *  * * ***  *  ***       **  ** *

consensus_10558#0      CGGAAGGACAGCATCCAGATTGAGTGGCAGGACTTAATACGATGGAACGAGATTTATTTG 896
consensus_10558#1      ---AATCTCCGGTTCT---CTGGATAAAAAAACTATTCAAAATGATGTGATACCGGTTTT 221
                          **   * *  **     **  *   *  ***    *  ***    ** *    *** 

consensus_10558#0      ACGTAGAGGAGCTGGAATAATTGGTAGAATATGCATAGTGTGAATTATTTTTCTGATGAC 956
consensus_10558#1      A---AAAAAAGTT---ATAGATTAT-GATTTTGATCAGGATGTTCGTTTTTTTGCACAAC 274
                       *   * *  ** *   ***  *  * ** * **   **  **     *****   *  **

consensus_10558#0      AATCCATTAAATCAGTGGTTGTAGGCATTGAACTAGCGGGAGAAGAGCTAACCATACCGC 1016
consensus_10558#1      AAAGT-TTAAACTATT--TTACAGCTACCTAATGTTTATGCGTATATATTCTTCTAATTC 331
                       **    *****  * *  **  **  *   **       * * * *  *     **   *

consensus_10558#0      TATAAGT---GGCAGTTGAACCTGGGATCAATGGAATTAAATGTCCGGGTTGTCCGTGGA 1073
consensus_10558#1      TGTGAATTTAGTAAGTTTATAGAAGAAGAAGACGAAGAATCTATTTCAGTCATCATCGTA 391
                       * * * *   *  **** *     * *  *   ***  *  * *    **  **   * *

consensus_10558#0      AGGAAGAAGCCTGTGGCTGGTTGTGAACTGATGTGTTCCCAAAGGGCTGCCATGCGAAAA 1133
consensus_10558#1      TGGGATAATAATGATA-TGATGATGAGCTG-TGACTTATTTAAGG------AAGCGAAAA 443
                        ** * **   **    ** *  *** *** **  **    ****      * *******

consensus_10558#0      CTGAATGTGGAGCCATATTAGGCGT-TCCTTTACTGATTGGAGCGCTTGAACTGCCTTCT 1192
consensus_10558#1      C-GATTCTGTCTGTTTGTTTTTCTTGTTCATGGGTCATTATTGTG-TTAGTCTCCTTTCT 501
                       * ** * **      * **   * * * * *   * ***   * * **   ** * ****

consensus_10558#0      AAAGATGGCAGACGTTGTCCATAGTCAAAGGAAGTCAAATCTGATATACTGTGTACCTCT 1252
consensus_10558#1      TTTCTTTTTTCCTTTTTTTCTTCTTCTAAACAAAACAA--TCAATGTTCCA-ACATCTCT 558
                            *        ** * * *  ** **  **  ***     ** * *     * ****

consensus_10558#0      GGACT-CAGGTGTGAAGTTTGAGGACTAGTTGCGT-CAACCGAAGCACCTTGTTGCCTGA 1310
consensus_10558#1      CTTTTACAGTTTTGCTTATTCCATTAATGTTGCATTCTATCTATACACTTGTTTCTCTCT 618
                           * *** * **    **        ***** * * * * *  *** *  **  **  

consensus_10558#0      GCATATTAACCCAGTTTGGTCCAGACTTGTCAAAACTCTGGTACTGATGACATCCTGGGT 1370
consensus_10558#1      CTCTCTTTGTTTACTTTTTCCGAATTGTAATAACATTTAGTTACTATCTGGAAAACAAAC 678
                          * **     * ***   * *    *   ** * *  * ****      *        

consensus_10558#0      CACCAAA---ACC-TTCATGTGTGTGATGATGATCTGTAACAACCCCTTCATCAAATTCC 1426
consensus_10558#1      AAACAAACATACTACTCACTTGTTTGTTTGTTATATATAAAAATTTTTTT-TTGTTTTTT 737
                        * ****   **   ***  *** ** *  * ** * *** **    **  *    **  

consensus_10558#0      TCATCCATATCA 1438
consensus_10558#1      T----------- 738
                       *