cluster # 10562

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Schistosoma mansoni
cluster # 10562 cluster # 10562 Sequences # 18 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10562#0 length = 1086 sequences # 12
consensus_10562#1 length = 510 sequences # 1

consensus_10562#2 length = 508 sequences # 2
consensus_10562#3 length = 481 sequences # 2
consensus_10562#4 length = 450 sequences # 1

consensusID : consensus_10562#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1086
fasta sequence

                              [CCAGCCANAATTTGGCACGAGGGTCCCGCGCAACTCGGTCTTAGCGCGTCAAAGTTATGAACCGAATCTTCGGACAGGCTAAACCGAAACAACCCCTCCCGAATTTGACTGATGTGATTTCCAATGTGGATAGCCGGGCAGAGTCTGTCGATAAAAAAATTGATAAACTGGATGAGGAACT-AAAAAAATATAAACTACAAATGCAAAAGATGAGAGACGGTCCTGCAAAAGAGAGCGTCAAGATGAAAGCTCTAAGAATTTTGAAGCAAAAGAAGGTTTATGAAAATCAGAAAGAACAACTTTCCAACCAAAGTTTTAATATAGAACAAACTAATTTTGCAATCCAGACGGTGCGTGATACCAAGGTTACAGTGGATGCCATGAAAGTCGGTGCCAAGGAATTAAAAATGGAAATGAAAAAAATTAACCTAAATAGTGTAGAAGACCTTCAAGACGATTTAGCTGATCTACTCGTCTCAACTGATGAACTACAAAATATTCTCAGTCAATCCTATGCGACACCAGATATAAATGAAAATGATTTGGAACAAGAATTGATGGGTCTGTGTGATGAGCTAGGTTCTGATACAACGTATTTAAATGAAGACTTTAACGCACCTTCTGTTCCAACCGGGATTCCTGGAGATAGTTTACCAACTCCAGCCACGGGTACTATGCCGTCTGCTTCAAATATCAAACTGGACGAATTTGGTTTGCCTCAGATTTCTTGAATCACACTTTTCTTCACTGAAACGACACTTATTTCTTGATTTATTTCAGAAGTGTA-CTGTTCTCCAATAAAGTATTGTATTCACTTTTGCTTCTAATAGTATCTTATCTGTAATGATTTTTTTATTTCTTTTGTCAGTTGTATATCTTGTTGTCAAGAGCTATATCAGTGGACGAATTCGTCACAGAATGTTCCGTCATTCATTAGTATTGTAGTATTCTGATGTTATCAGTGATACAGCTTTGACAGAGAGGAACAAGTGGGTGTCGATAAATCCTCATTTAAACTCATTGTATCCTCATAACAGGATTCATTTATATTTACTAAATTCAGTTTTTTTCTCAATAACTAAATTG]

[+] EMBL CD079622             [CCAGCCANAATTTGGCACGAGGGTCCCGCGCAACTCGGTCTTAGCGCGTCAAAGTTATGAACCGAATCTTCGGACAGGCTAAACCGAAACAACCCCTCCCGAATTTGACTGATGTGATTTCCAATGTGGATAGCCGGGCAGAGTCTGTCGATAAAAAAATTGATAAACTGGATGAGGAACT AAAAAAATATAAACTACAAATGCAAAAGATGAGAGACGGTCCTGCAAAAGAGAGCGTCAAGATGAAAGCTCTAAGAATTTTGAAGCAAAAGAAGGTTTATGAAAATCAGAAAGAACAACTTTCCAACCAAAGTTTTAATATAGAACAAACTAATTTTGCAATCCAGACGGTGCGTGATACCAAGGTTACAGTGGATGCCATGAAAGTCGGTGCCAAGGAATTAAAAATGGAAATGAAAAAAATTAACCTAAATAGTGTAGAAGACCTTCAAGACGATTTAGCTGATCTACTCGTCTCAACTGATGAACTACAAAATATTCTCAGTCAATCCTATGCGACACCAGATATAAATGAAAATGATTTGGAACAAGAATTGATGGGTCTGTGTGATGAGCTAGGTTCTGATACAACGTATTTAAATGAAGACTTTAACGCACCTTCTGTTCCAACCGGGATTCCTGGAGATAGTTTACCAACTCCAGCCACGGGTACTATGCCGTCTGCTTC AATATC AACTGGACGAATTT GTTTGCCTCAGATTTCTTG ATCACACTTTTC TCACTG AACGACACTTATTTCTTGA TTATTTCAG AGTGTACCTG TCTCCAATAAg                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD139822             [                     tcgtCCGCGCAACTCGGTCTTAGCGCGTCAAAGTTATGAACCGAATCTTCGGACAGGCTAAACCGAAACAACCCCTCCCGAATTTGACTGATGTGATTTCCAATGTGGATAGCCGGGCAGAGTCTGTCGATAAAAAAATTGATAAACTGGATGAGGAACTAAAAAAAATATAAACTACAAATGCAAAAGATGAGAGACGGTCCTGCAAAAGAGAGCGTCAAGATGAAAGCTCTAAGAATTTTGAAGCAAAAGAAGGTTTATGAAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD188425             [                               AACTCGGTCTTGGCGCGTCAAAGTTATGAACCGAATCTTCGGACAGGCTAAACCGAAACAACCCCCCCCGAATTTGACTGATGTGATTTCCAATGTGGATAGCCGGGCAGAGTCTGTCGATAAAAAAATTGATAAACTGGATGAGGAACT AAAAAAATATAAACTACAAATGCAAAAGATGAGAGACGGTCCTGCAAAAGAGAGCGTCAAGATGAAAGCTCTAAGAATTTTGAAGCAAAAGAAGGTTTATGAAAATCAGAAAGAACAACTTTCCAACCAAAGTTTTAATATAGAACAAACTAATTTTGCAATCCAGACGGTGCGTGATACCAAGGTTACAGTGGATGCCATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD073886             [                                                                                                                          AATGTGGATAGCCGGGCAGAGTCTGTCGATAAAAAAATTGATAAACTGGATGAGGAACT AAAAAAATATAAACTACAAATGCAAAAGATGAGAGACGGTCCTGCAAAAGAGAGCGTCAAGATGAAAGCTCTAAGAATTTTGAAGCAAAAGAAGGTTTATGAAAATCAGAAAGAACAACTTTCCAACCAAAGTTTTAATATAGAACAAACTAATTTTGCAATCCAGACGGTGCGTGATACCAAGGTTACAGTGGATGCCATGAAAGTCGGTGCCAAGGAATTAAAAATGGAAATGAAAAAAATTAACCTAAATAGTGTAGAAGACCTTCAAGACGATTTAGCTGATCTACTCGTCTCAACTGATGAACTACAAAATATTCTCAGTCAATCCTATGCGACACCAGATATAAATGAAAATGATTTGGAACAAGAATTGATGGGTCTGTGTGATGAGCTAGGTTCTGATACAACGTATTTAAATGAAGACTTTAACGCACCTTCTGTTCCAACCGGGATTCCTGGAGATAGTTTACCAACTCCAGCCACGGGTACTATGCCGTCTGCTTCAAATATCAAACTGGACGAATTTGGTTTGCCTCAGATTTCTTGAATCACACTTTTCTTCACTGAAACGACACTTATTTCTTGATTTATTTCAGAAGTGTA ATGTTCTCCAATAAAGT                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD177904             [                                                                                                                                                                                                                             tgtTGCAAAGGAGAGCGTCAAGATGAAAGCTCTAAGAATTTTGAAGCAAAAGAAGGTTTATGAAAATCAGAAAGAACAACTTTCCAACCAAAGTTTTAATATAGAACAAACTAATTTTGCAATCCAGACGGTGCGTGATACCAAGGTTACAGTGGATGCCATGAAAGTCGGTGCCAAGGAATTAAAAATGGAAATGAAAAAAATTAACCTAAATAGTGTAGAAGACCTTCAAGACGATTTAGCTGATCTACTCGTCTCAACTGATGAACTACCAAATATTTTCAGTCAATCCTATGCGACACCAGATATAAATGAAAATGATTTGGAACAAGAATTGATGGGTCTGTGTGATGAGCTAGGTTTTGATACAACGTATTTAAATGAAGACTTTgcaacac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD177989             [                                                                                                                                                                                                                                                AAGATGAAAGCTCTAAGAATTTTGAAGCAAAAGAAGGTTTATGAAAATCAGAAAGAACAACTTTCCAACCAAAGTTTTAATATAGAACAAACTAATTTTGCAATCCAGACGGTGCGTGATACCAAGGTTACAGTGGATGCCATGAAAGTCGGTGCCAAGGAATTAAAAATGGAAATGAAAAAAATTAACCTAAATAGTGTAGAAGACCTTCAAGACGATTTAGCTGATCTACTCGTCTCAACTGATGAACTACAAAATATTCTCAGTCAATCCTATGCGACACCAGATATAAATGAAAATGATTTGGAACAAGAATTGATGGGTCTGTGTGATGAGCTAGGTTCTGATACAACGTATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD160690             [                                                                                                                                                                                                                                                AAGATGAAAGCTCTAAGAATTTTGAAGCAAAAGAAGGTTTATGAAAATCAGAAAGAACAACTTTCCAACCAAAGTTTTAATATAGAACAAACTAATTTTGCAATCCAGACGGTGCGTGATACCAAGGTTACAGTGGATGCCATGAAAGTCGGTGCCAAGGAATTAAAAATGGAAATGAAAAAAATTAACCTAAATAGTGTAGAAGACCTTCAAGACGATTTAGCTGATCTACTCGTCTCAACTGATGAACTACAAAATATTCTCAGTCAATCCTATGCGACACCAGATATAAATGAAAATGATTTGGAACAAGAATTGATGGGTCTGTGTGATGAGCTAGGTTCTGATACAACGTATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD074989             [                                                                                                                                                                                                                                                                                                               TCCAACCAAAGTTTTAATATAGAACAAACTAA TTTGCAATCCAGACGGTGCGTGATACCAAGGTTACAGTGGATGCCATGAAAGTCGGTGCCAAGGAATTAAAAATGGAAATGAAAAAAATTAACCTAAATAGTGTAGAAGACCTTCAAGACGATTTAGCTGATCTACTCGTCTCAACTGATGAACTACAAAATATTCTCAGTCAATCCTATGCGACACCAGATATAAATGAAAATGATTTGGAACAAGAATTGATGGGTCTGTGTGATGAGCTAGGTTCTGATACAACGTATTTAAATGAAGACTTTAACGCACCTTCTGTTCCAACCGGGATTCCTGGAGATAGTTTACCAACTCCAGCCACGGGTACTATGCCGTCTGCTTCAAATATCAAACTGGACGAATTTGGTTTGCCTCAGATTTCTTGAATCACACTTTTCTTCACTGAAACGACACTTATTTCTTGATTTATTTCAGAAGTGTA CTGTTCTCCAATAAAGTATTGTATTCACTTTTGCTTCTAATAGTATCTTATCTGTAATGATTTTTTTATTTCTTTTGTCAGTTGTATATCTTGTTGTCAAGAGCTATATCAGTGGACGAATTCGTCACAGAATGTTCCGTCATTCATTAGTATTGTAGTATTCTGATGTTATCAGTGATACAGCTTTGACAGAGAGGAACAAGTGGGTGTCGATAAATCCTCATTTAAACTCATTGTATCCTCATAACAGGATTCATTTATATTTACTAAATTCAGTTTTTTTCTCAATAACTAAATTG]
[+] EMBL CD139615             [                                                                                                                                                                                                                                                                                                                             TAATATAGAACAAACTAATTTTGCAATCCAGACGGTGCGTGATACCAAGGTTACAGTGGATGCCATGAAAGTCGGTGCCAAGGAATTAAAAATGGAAATGAAAAAAATTAACCTAAATAGTGTAGAAGACCTTCAAGACGATTTAGCTGATCTACTCGTCTCAACTGATGAACTACAAAATATTCTCAGTCAATCCTATGCGACACCAGATATAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD195979             [                                                                                                                                                                                                                                                                                                                              AATATAGAACAAACTAATTTTGCAATCCAGACGGTGCGTGATACCAAGGTTACAGTGGATGCCATGAAAGTCGGTGCCAAGGAATTAAAAATGGAAATGAAAAAAATTAACCTAAATAGTGTAGAAGACCTTCAAGACGATTTAGCTGATCTACTCGTCTCAACTGATGAACTACAAAATATTCTCAGTCAATCCTATGCGACACCAGATATAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD195993             [                                                                                                                                                                                                                                                                                                                              AATATAGAACAAACTAATTTTGCAATCCAGACGGTGCGTGATACCAAGGTTACAGTGGATGCCATGAAAGTCGGTGCCAAGGAATTAAAAATGGAAATGAAAAAAATTAACCTAAATAGTGTAGAAGACCTTCAAGACGATTTAGCTGATCTACTCGTCTCAACTGATGAACTACAAAATATTCTCAGTCAATCCTATGCGACACCAGATATAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD196036             [                                                                                                                                                                                                                                                                                                                              AATATAGAACAAACTAATTTTGCAATCCAGACGGTGCGTGATACCAAGGTTACAGTGGATGCCATGAAAGTCGGTGCCAAGGAATTAAAAATGGAAATGAAAAAAATTAACCTAAATAGTGTAGAAGACCTTCAAGACGATTTAGCTGATCTACTCGTCTCAACTGATGACCTACAAAATATTCTCAGTCAATCCTATGCGACACCAGATATAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]




>consensus_10562#0
CCAGCCANAATTTGGCACGAGGGTCCCGCGCAACTCGGTCTTAGCGCGTCAAAGTTATGA
ACCGAATCTTCGGACAGGCTAAACCGAAACAACCCCTCCCGAATTTGACTGATGTGATTT
CCAATGTGGATAGCCGGGCAGAGTCTGTCGATAAAAAAATTGATAAACTGGATGAGGAAC
TAAAAAAATATAAACTACAAATGCAAAAGATGAGAGACGGTCCTGCAAAAGAGAGCGTCA
AGATGAAAGCTCTAAGAATTTTGAAGCAAAAGAAGGTTTATGAAAATCAGAAAGAACAAC
TTTCCAACCAAAGTTTTAATATAGAACAAACTAATTTTGCAATCCAGACGGTGCGTGATA
CCAAGGTTACAGTGGATGCCATGAAAGTCGGTGCCAAGGAATTAAAAATGGAAATGAAAA
AAATTAACCTAAATAGTGTAGAAGACCTTCAAGACGATTTAGCTGATCTACTCGTCTCAA
CTGATGAACTACAAAATATTCTCAGTCAATCCTATGCGACACCAGATATAAATGAAAATG
ATTTGGAACAAGAATTGATGGGTCTGTGTGATGAGCTAGGTTCTGATACAACGTATTTAA
ATGAAGACTTTAACGCACCTTCTGTTCCAACCGGGATTCCTGGAGATAGTTTACCAACTC
CAGCCACGGGTACTATGCCGTCTGCTTCAAATATCAAACTGGACGAATTTGGTTTGCCTC
AGATTTCTTGAATCACACTTTTCTTCACTGAAACGACACTTATTTCTTGATTTATTTCAG
AAGTGTACTGTTCTCCAATAAAGTATTGTATTCACTTTTGCTTCTAATAGTATCTTATCT
GTAATGATTTTTTTATTTCTTTTGTCAGTTGTATATCTTGTTGTCAAGAGCTATATCAGT
GGACGAATTCGTCACAGAATGTTCCGTCATTCATTAGTATTGTAGTATTCTGATGTTATC
AGTGATACAGCTTTGACAGAGAGGAACAAGTGGGTGTCGATAAATCCTCATTTAAACTCA
TTGTATCCTCATAACAGGATTCATTTATATTTACTAAATTCAGTTTTTTTCTCAATAACT
AAATTG

consensusID : consensus_10562#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 510
fasta sequence

                              [ANCGCNNANNCTGTNGATAAAAAAATTGANNAGCTNGATGAGGAACTAAAANATTATNNACTACNGNTGCAAANGATGANAGACNGTCCTGCAAAAAANAGCGTCANGATGAAAGCTCTAATAATTTTGNAGCAAAAGAAGGTTTATGAAAATCAGAAACAACNNCTTTCCCACCNAAGTTTTANTATACAACANACTNATTTTGCANTCCNGACGGNGCGTGANACCNNNGCTACNGNGGNNGCCATGAAAGNCGGCGCCGAGGAATTAANAGTGGNNATGAAAAAANTTNNCCTNANTNGTGNAGAACACCTTCAAGACNATTTNGCTGNTCTACTCGNCTCAGCTGATNAACTACAAANTATTCTCAGGTNANTCCTCTGCGACACCNGATATTNATGAAAATGANTNGGAACANNAATTGATGGGTCTNTGTGATGAGCTATGTTCTGATACAACNTTTTTAAATGAANACTTTANCNCACCTTNTGTTACAACCGGGATTGCTGG]

[+] EMBL BE431300             [ANCGCNNANNCTGTNGATAAAAAAATTGANNAGCTNGATGAGGAACTAAAANATTATNNACTACNGNTGCAAANGATGANAGACNGTCCTGCAAAAAANAGCGTCANGATGAAAGCTCTAATAATTTTGNAGCAAAAGAAGGTTTATGAAAATCAGAAACAACNNCTTTCCCACCNAAGTTTTANTATACAACANACTNATTTTGCANTCCNGACGGNGCGTGANACCNNNGCTACNGNGGNNGCCATGAAAGNCGGCGCCGAGGAATTAANAGTGGNNATGAAAAAANTTNNCCTNANTNGTGNAGAACACCTTCAAGACNATTTNGCTGNTCTACTCGNCTCAGCTGATNAACTACAAANTATTCTCAGGTNANTCCTCTGCGACACCNGATATTNATGAAAATGANTNGGAACANNAATTGATGGGTCTNTGTGATGAGCTATGTTCTGATACAACNTTTTTAAATGAANACTTTANCNCACCTTNTGTTACAACCGGGATTGCTGG]




>consensus_10562#1
ANCGCNNANNCTGTNGATAAAAAAATTGANNAGCTNGATGAGGAACTAAAANATTATNNA
CTACNGNTGCAAANGATGANAGACNGTCCTGCAAAAAANAGCGTCANGATGAAAGCTCTA
ATAATTTTGNAGCAAAAGAAGGTTTATGAAAATCAGAAACAACNNCTTTCCCACCNAAGT
TTTANTATACAACANACTNATTTTGCANTCCNGACGGNGCGTGANACCNNNGCTACNGNG
GNNGCCATGAAAGNCGGCGCCGAGGAATTAANAGTGGNNATGAAAAAANTTNNCCTNANT
NGTGNAGAACACCTTCAAGACNATTTNGCTGNTCTACTCGNCTCAGCTGATNAACTACAA
ANTATTCTCAGGTNANTCCTCTGCGACACCNGATATTNATGAAAATGANTNGGAACANNA
ATTGATGGGTCTNTGTGATGAGCTATGTTCTGATACAACNTTTTTAAATGAANACTTTAN
CNCACCTTNTGTTACAACCGGGATTGCTGG

consensusID : consensus_10562#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 508
fasta sequence

                              [CTGTCGATAAAAAAATTGATAAACTGGATGAGGAACTAAAAAAATATAAACTACAAATGCAAAAGATGAGAGACGGTCGGGGGTACCATATATATAATAGTAAGTGCATCATGTATATGAGTTGTTTAAATAAGGGATGAGATAAAAGAGTTAATCCCATTGATATCAAAAAACGAATACAAACATACTACTTAAATATAAGAAGAATTTGAGATCTGATTGAATTCACTGGTTAAATGTTTATTAATCCATTCTAAAGTATAATCTACACTAAACATTAAAAATTGGATGCTTTTGTTTTAAAAAGAGAAAGAAATCATATGATTGAATTAAATCAAAAATGTATGATTATATTCTATAAGCAGATTGATTCATGTATACATTACAAAGGAGTAGAATATGCGTGTGTTTTCCCATTGTCATCAAAGAAGAAAAAAAAATACAAAGTAAACATCATCTGAAGAAGTAGAATGGTTTGAATCGTATGAAATCATTTCAAAGAATGATT]

[+] EMBL CD201892             [CTGTCGATAAAAAAATTGATAAACTGGATGAGGAACTAAAAAAATATAAACTACAAATGCAAAAGATGAGAGACGGTCGGGGGTACCATATATATAATAGTAAGTGCATCATGTATATGAGTTGTTTAAATAAGGGATGAGATAAAAGAGTTAATCCCATTGATATCAAAAAACGAATACAAACATACTACTTAAATATAAGAAGAATTTGAGATCTGATTGAATTCACTGGTTAAATGTTTATTAATCCATTCTAAAGTATAATCTACACTAAACATTAAAAATTGGATGCTTTTGTTTTAAAAAGAGAAAGAAATCATATGATTGAATTAAATCAAAAATGTATGATTATATTCTATAAGCAGATTGATTCATGTATACATTACAAAGGAGTAGAATATGCGTGTGTTTTCCCATTGTCATCAAAGAAGAAAAAAAAATACAAAGTAAACATCATCTGAAGAAGTAGAATGGTTTGAATCGTATGAAATCATTTCAAAGAATGATT]
[-] EMBL CD196139             [                                                                                                                                                                        AAAAACGAATACAAACATNCTACTTAAATATAAGAAGAATNTGAGATCTGATTGAATTCACTGGTTAAATGTTTATTAATCCATTCTAAAGTATAATCTACACTAAACATTAAAAATTGGATGCTTTTGTTTTAAAAAGAGAAAGAAATCATATGATTGAATTAAATCAAAAATGTATGATTATATTCTATAAGCAGATTGATTCATGTATACATTACAAAGGAGTAGAATATGCGTGTGTTTTCCCATTGTCATCAAAGAAGAAAAAAAAATACAAAGTt                                                           ]




>consensus_10562#2
CTGTCGATAAAAAAATTGATAAACTGGATGAGGAACTAAAAAAATATAAACTACAAATGC
AAAAGATGAGAGACGGTCGGGGGTACCATATATATAATAGTAAGTGCATCATGTATATGA
GTTGTTTAAATAAGGGATGAGATAAAAGAGTTAATCCCATTGATATCAAAAAACGAATAC
AAACATACTACTTAAATATAAGAAGAATTTGAGATCTGATTGAATTCACTGGTTAAATGT
TTATTAATCCATTCTAAAGTATAATCTACACTAAACATTAAAAATTGGATGCTTTTGTTT
TAAAAAGAGAAAGAAATCATATGATTGAATTAAATCAAAAATGTATGATTATATTCTATA
AGCAGATTGATTCATGTATACATTACAAAGGAGTAGAATATGCGTGTGTTTTCCCATTGT
CATCAAAGAAGAAAAAAAAATACAAAGTAAACATCATCTGAAGAAGTAGAATGGTTTGAA
TCGTATGAAATCATTTCAAAGAATGATT

consensusID : consensus_10562#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 481
fasta sequence

                              [TGCAATTCAATCATTCTTTGAAATGATTTCATACGATTCGAACCATTCTACTTCTTCAGATGATGTTTACCTTGTATTTTTTTTTTCTTCTTTGATGACAATGGGAAAACACACGCATATTCTACTCCTTTGTAATGTATACATGAATCAATCTGCTTATAGAATATAATCATACATTTTTGATTTAATTCAATCATATGATTTCTTTCTCTTTTTAAAACAAAAGCATCCAATTTTTAATGTTTAGTGTAGATTATACTTTAGAATGGATTAATAAACATTTAACCAGTGAATTCAATCAGATCTCAAATTCTTCTTATATTTAAGTAGTATGTTTGTATTCGTTTTTTGATATCAAAGGGATTAACTCTTTTATCTCATCCCTTATTTAAACAACTCATATACATGATGCACTTACTATTATATATATGGTTTCATCCCCTCTCGTTCTCTATGACTCGCACATGGATCACCTACAGCA]

[-] EMBL CD182012             [TGCAATTCAATCATTCTTTGAAATGATTTCATACGATTCGAACCATTCTACTTCTTCAGATGATGTTTACCTTGTATTTTTTTTTTCTTCTTTGATGACAATGGGAAAACACACGCATATTCTACTCCTTTGTAATGTATACATGAATCAATCTGCTTATAGAATATAATCATACATTTTTGATTTAATTCAATCATATGATTTCTTTCTCTTTTTAA                                                                                                                                                                                                                                                                       ]
[+] EMBL CD202077             [       CAATCATTCTTTGAAATGATTTCATACGATTCAAACCATTCTACTTCTTCAGATGATGTTTACTTTGTATTTTTTTTTTCTTCTTTGATGACAATGGGAAAACACACGCATATTCTACTCCTTTGTAATGTATACACGAATCAATCTGCTTATAGAATATAATCATACATTTTTGATTTAATTCAATCATATGATTTCTTTCTCTTTTTAAAACAAAAGCATCCAATTTTTAATGTTTAGTGTAGATTATACTTTAGAATGGATTAATAAACATTTAACCAGTGAATTCAATCAGATCTCAAATTCTTCTTATATTTAAGTAGTATGTTTGTATTCGTTTTTTGATATCAAAGGGATTAACTCTTTTATCTCATCCCTTATTTAAACAACTCATATACATGATGCACTTACTATTATATATATGGTTTCATCCCCTCTCGTTCTCTATGACTCGCACATGGATCACCTACAGCA]




>consensus_10562#3
TGCAATTCAATCATTCTTTGAAATGATTTCATACGATTCGAACCATTCTACTTCTTCAGA
TGATGTTTACCTTGTATTTTTTTTTTCTTCTTTGATGACAATGGGAAAACACACGCATAT
TCTACTCCTTTGTAATGTATACATGAATCAATCTGCTTATAGAATATAATCATACATTTT
TGATTTAATTCAATCATATGATTTCTTTCTCTTTTTAAAACAAAAGCATCCAATTTTTAA
TGTTTAGTGTAGATTATACTTTAGAATGGATTAATAAACATTTAACCAGTGAATTCAATC
AGATCTCAAATTCTTCTTATATTTAAGTAGTATGTTTGTATTCGTTTTTTGATATCAAAG
GGATTAACTCTTTTATCTCATCCCTTATTTAAACAACTCATATACATGATGCACTTACTA
TTATATATATGGTTTCATCCCCTCTCGTTCTCTATGACTCGCACATGGATCACCTACAGC
A

consensusID : consensus_10562#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 450
fasta sequence

                              [CTGTTATCGGCCGAGACAGACGGGGTTCCATATATATAATAGTAAGTGCATCATGTATATGAGTTGTTTAAATAAGGGATGAGATAAAAGAGTTAATCCCATTGATATCAAAAAACGAATACAAACATACTACTTAAATATAAGAAGAATTTGAGATCTGATTGTATTCACTGGTTAAATGTTTATTAATCCATTCTAAAGTATAATCTACACTAAACATTAAAAATTGGATGCTTTTGTTTTAAAAAGAGAAAGAAATCATATGATTGAATTAAATCAAAAATGTATGATTATATTCTATAAGCAGATTGATTCATGTATACATTACAAAGGAGTAGAATATGCGTGTGTTTTCCTATTGTCATCAAAGAAGAAAAAAAAATACAAAGTAAACATCATCTGAAGAAGTAGAATGGTTTGAATCGTATGAAATCATTTCAAAGAATGATT]

[+] EMBL CD202119             [CTGTTATCGGCCGAGACAGACGGGGTTCCATATATATAATAGTAAGTGCATCATGTATATGAGTTGTTTAAATAAGGGATGAGATAAAAGAGTTAATCCCATTGATATCAAAAAACGAATACAAACATACTACTTAAATATAAGAAGAATTTGAGATCTGATTGTATTCACTGGTTAAATGTTTATTAATCCATTCTAAAGTATAATCTACACTAAACATTAAAAATTGGATGCTTTTGTTTTAAAAAGAGAAAGAAATCATATGATTGAATTAAATCAAAAATGTATGATTATATTCTATAAGCAGATTGATTCATGTATACATTACAAAGGAGTAGAATATGCGTGTGTTTTCCTATTGTCATCAAAGAAGAAAAAAAAATACAAAGTAAACATCATCTGAAGAAGTAGAATGGTTTGAATCGTATGAAATCATTTCAAAGAATGATT]




>consensus_10562#4
CTGTTATCGGCCGAGACAGACGGGGTTCCATATATATAATAGTAAGTGCATCATGTATAT
GAGTTGTTTAAATAAGGGATGAGATAAAAGAGTTAATCCCATTGATATCAAAAAACGAAT
ACAAACATACTACTTAAATATAAGAAGAATTTGAGATCTGATTGTATTCACTGGTTAAAT
GTTTATTAATCCATTCTAAAGTATAATCTACACTAAACATTAAAAATTGGATGCTTTTGT
TTTAAAAAGAGAAAGAAATCATATGATTGAATTAAATCAAAAATGTATGATTATATTCTA
TAAGCAGATTGATTCATGTATACATTACAAAGGAGTAGAATATGCGTGTGTTTTCCTATT
GTCATCAAAGAAGAAAAAAAAATACAAAGTAAACATCATCTGAAGAAGTAGAATGGTTTG
AATCGTATGAAATCATTTCAAAGAATGATT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10562#0      CCAGCCANAATTTGGCACGAGGGTCCCGCGCAACTCGGTCTTAGCGCGTCAAAGTTATGA 60
consensus_10562#1      ------------------------------------------------------------
consensus_10562#2      ------------------------------------------------------------
consensus_10562#4      ------------------------------------------------------------
consensus_10562#3      ------------------------------------------------------------
                                                                                   

consensus_10562#0      ACCGAATCTTCGGACAGGCTAAACCGAAACAACCCCTCCCGAATTTGACTGATGTGATTT 120
consensus_10562#1      ------------------------------------------------------------
consensus_10562#2      ------------------------------------------------------------
consensus_10562#4      ------------------------------------------------------------
consensus_10562#3      ------------------------------------------------------------
                                                                                   

consensus_10562#0      CCAATGTGGATAGCCGGGCAGAGTCTGTCGATAAAAAAATTGATAAACTGGATGAGGAAC 180
consensus_10562#1      --------------ANCGCNNANNCTGTNGATAAAAAAATTGANNAGCTNGATGAGGAAC 46
consensus_10562#2      ------------------------CTGTCGATAAAAAAATTGATAAACTGGATGAGGAAC 36
consensus_10562#4      ------------------------------------------------------------
consensus_10562#3      ------------------------------------------------------TGCAAT 6
                                                                                   

consensus_10562#0      TAAAAAAATATAAACTACAAATGCAAAAGATGAGAGACGGTCCTGCAAAAGAGA-GCGTC 239
consensus_10562#1      TAAAANATTATNNACTACNGNTGCAAANGATGANAGACNGTCCTGCAAAAAANA-GCGTC 105
consensus_10562#2      TAAAAAAATATAAACTACAAATGCAAAAGATGAGAGACGGTCGGGGGTACCATATATATA 96
consensus_10562#4      --------------------CTGTTATCGGCC-GAGACAGACGGGG-TTCCATATATATA 38
consensus_10562#3      TCAATCATTCTTTGAAATGATTTCATACGATTCGAACCATTCTACTTCTTCAGATGATGT 66
                                            *      *     *  *   *         * *      

consensus_10562#0      AAGATGAAAGCTCTAAGAATTTTGA--AGCAAAAGAAGGTTTATGAAAATCAGAAAGAAC 297
consensus_10562#1      ANGATGAAAGCTCTAATAATTTTGN--AGCAAAAGAAGGTTTATGAAAATCAGAAACAAC 163
consensus_10562#2      ATAGTAAGTGCATCATGTATATGAGTTGTTTAAATAAGGGATGAGATAAA-AGAGTTAAT 155
consensus_10562#4      ATAGTAAGTGCATCATGTATATGAGTTGTTTAAATAAGGGATGAGATAAA-AGAGTTAAT 97
consensus_10562#3      TTACCTTGTATTTTTTTTTTCTTCTTTGATGACA-ATGGGAAAACACACGCATATTCTAC 125
                                          * *         * * * **      * *   * *    * 

consensus_10562#0      AACTTTCCAACCAAAGTTTTAATATAGAACAAACTAATTT--TGCAATCCAGACGGTGCG 355
consensus_10562#1      NNCTTTCCCACCNAAGTTTTANTATACAACANACTNATTT--TGCANTCCNGACGGNGCG 221
consensus_10562#2      CCCATTGATATCAAAAAACGAATACA-AACATACTACTTAAATATAAGAAGAATTTGAGA 214
consensus_10562#4      CCCATTGATATCAAAAAACGAATACA-AACATACTACTTAAATATAAGAAGAATTTGAGA 156
consensus_10562#3      TCCTTTGTAATGTATACATGAATC---AATCTGCTTATAGAATATAATCATACATTTTTG 182
                         * **   *   *      * *    **    **  *    *  *              

consensus_10562#0      TGATACCAAGGTTACAG--TGGATGCCATGAAAGTCGGTGCCAAGG---AATTAAAAATG 410
consensus_10562#1      TGANACCNNNGCTACNG--NGGNNGCCATGAAAGNCGGCGCCGAGG---AATTAANAGTG 276
consensus_10562#2      TCTGATTGAATTCACTGGTTAAATGTT-TATTAATCCATTCTAAAGTATAATCTACACTA 273
consensus_10562#4      TCTGATTGTATTCACTGGTTAAATGTT-TATTAATCCATTCTAAAGTATAATCTACACTA 215
consensus_10562#3      ATTTAATTCAATCATA---TGATTTCTTTCTCTTTTTAAAACAAAA-GCATCCAATTTTT 238
                           *        *              *              *     *    *   * 

consensus_10562#0      GAAATGAAAAAAATTAACCTAAATAGTGTAGAAGACCTTCAAGACGATTTAGCTGATCTA 470
consensus_10562#1      GNNATGAAAAAANTTNNCCTNANTNGTGNAGAACACCTTCAAGACNATTTNGCTGNTCTA 336
consensus_10562#2      AACATTAAAAA-TTGGATGCTTTTGTTTTAAAAAGAGAAAGAAATCATATGATTGAATTA 332
consensus_10562#4      AACATTAAAAA-TTGGATGCTTTTGTTTTAAAAAGAGAAAGAAATCATATGATTGAATTA 274
consensus_10562#3      AATGTTTAGTG--TAGA---TTATACTTTAGAATGGATTAATAAACATTTAACCAGTGAA 293
                           *  *     *         *  *  * **          *  ** *         *

consensus_10562#0      CTCGTCTCAACTGATGAACTACAAAATATT--CTCAG-TCAATCCTATGCGACACCAGAT 527
consensus_10562#1      CTCGNCTCAGCTGATNAACTACAAANTATT--CTCAGGTNANTCCTCTGCGACACCNGAT 394
consensus_10562#2      --AATCAAAAATGTATGATTATATTCTATA--AGCAGATTGATTCATGTATACATTACAA 388
consensus_10562#4      --AATCAAAAATGTATGATTATATTCTATA--AGCAGATTGATTCATGTATACATTACAA 330
consensus_10562#3      TTCAATCAGATCTCAAATTCTTCTTATATTTAAGTAGTATGTTTGTATTCGTTTTTTGAT 353
                                                 ***      **     *               * 

consensus_10562#0      ATAAATGAAA-ATGATTTGGAACAAGAATTGATGGGTCTGTGTGATGAGCTAGGTTCTG- 585
consensus_10562#1      ATTNATGAAA-ATGANTNGGAACANNAATTGATGGGTCTNTGTGATGAGCTATGTTCTG- 452
consensus_10562#2      AGGAGTAGAATATGCGTGTGTTTTCCCATTGTC--ATCAAAGAAGAAAAAAAAATACAA- 445
consensus_10562#4      AGGAGTAGAATATGCGTGTGTTTTCCTATTGTC--ATCAAAGAAGAAAAAAAAATACAA- 387
consensus_10562#3      ATCAAAGGGA-TTAACTCTTTTATCTCATCCCTTATTTAAACAACTCATATACATGATGC 412
                       *        *  *   *          **       *          *   *  *     

consensus_10562#0      ATACAACGT-ATTTAAATGAAGACTTTAACGCACCTTCTGTTCCAACCG-----GGATTC 639
consensus_10562#1      ATACAACNT-TTTTAAATGAANACTTTANCNCACCTTNTGTTACAACCG-----GGATTG 506
consensus_10562#2      AGTAAACATCATCTGAAGAAGTAGAATGGTTTGAATCGTATGAAATC---------ATTT 496
consensus_10562#4      AGTAAACATCATCTGAAGAAGTAGAATGGTTTGAATCGTATGAAATC---------ATTT 438
consensus_10562#3      ACTTACTATTATATATATGGTTTCATCCCCTCTCGTTCTCTATGACTCGCACATGGATCA 472
                       *   *   *  * *  *                  *  * *   *           **  

consensus_10562#0      CTGGAGATAGTTTACCAACTCCAGCCACGGGTACTATGCCGTCTGCTTCAAATATCAAAC 699
consensus_10562#1      CTGG-------------------------------------------------------- 510
consensus_10562#2      CAAAGAATGATT------------------------------------------------ 508
consensus_10562#4      CAAAGAATGATT------------------------------------------------ 450
consensus_10562#3      CCTACAGCA--------------------------------------------------- 481
                       *                                                           

consensus_10562#0      TGGACGAATTTGGTTTGCCTCAGATTTCTTGAATCACACTTTTCTTCACTGAAACGACAC 759
consensus_10562#1      ------------------------------------------------------------
consensus_10562#2      ------------------------------------------------------------
consensus_10562#4      ------------------------------------------------------------
consensus_10562#3      ------------------------------------------------------------
                                                                                   

consensus_10562#0      TTATTTCTTGATTTATTTCAGAAGTGTACTGTTCTCCAATAAAGTATTGTATTCACTTTT 819
consensus_10562#1      ------------------------------------------------------------
consensus_10562#2      ------------------------------------------------------------
consensus_10562#4      ------------------------------------------------------------
consensus_10562#3      ------------------------------------------------------------
                                                                                   

consensus_10562#0      GCTTCTAATAGTATCTTATCTGTAATGATTTTTTTATTTCTTTTGTCAGTTGTATATCTT 879
consensus_10562#1      ------------------------------------------------------------
consensus_10562#2      ------------------------------------------------------------
consensus_10562#4      ------------------------------------------------------------
consensus_10562#3      ------------------------------------------------------------
                                                                                   

consensus_10562#0      GTTGTCAAGAGCTATATCAGTGGACGAATTCGTCACAGAATGTTCCGTCATTCATTAGTA 939
consensus_10562#1      ------------------------------------------------------------
consensus_10562#2      ------------------------------------------------------------
consensus_10562#4      ------------------------------------------------------------
consensus_10562#3      ------------------------------------------------------------
                                                                                   

consensus_10562#0      TTGTAGTATTCTGATGTTATCAGTGATACAGCTTTGACAGAGAGGAACAAGTGGGTGTCG 999
consensus_10562#1      ------------------------------------------------------------
consensus_10562#2      ------------------------------------------------------------
consensus_10562#4      ------------------------------------------------------------
consensus_10562#3      ------------------------------------------------------------
                                                                                   

consensus_10562#0      ATAAATCCTCATTTAAACTCATTGTATCCTCATAACAGGATTCATTTATATTTACTAAAT 1059
consensus_10562#1      ------------------------------------------------------------
consensus_10562#2      ------------------------------------------------------------
consensus_10562#4      ------------------------------------------------------------
consensus_10562#3      ------------------------------------------------------------
                                                                                   

consensus_10562#0      TCAGTTTTTTTCTCAATAACTAAATTG 1086
consensus_10562#1      ---------------------------
consensus_10562#2      ---------------------------
consensus_10562#4      ---------------------------
consensus_10562#3      ---------------------------