These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10565#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1128 fasta sequence [ATGGTATTGGCTGGTCTAAAAATCACATACAGTATTAATTTGAATGTCGGGAAGTAATTTTCGTCTGCTTGATGATGACACTCAGTTCATGGACAAGTATCCTAATGGGCTTTCTTTGGTTGATTTGCTGCCATTTTACGACTCCATATCTAAGAATGAACCGCTTAAATTAGAATGGGTTTGTCCAGGCAAAATCGATCCTAACGTTCAGAGGGAAACAACCAAAATTCGTACTGAAACAAATGATAATCCTGTCCCAAAGGTTTCTGAATCCTTGACTAGTATTGTAAAGTTAAAAGAGTTCGACTTCGATGAGTCTCCGAATCAACCATCTATTCCTTCAGTTCCACTTGGTGCTGCTGCTCAAAATGCAAACTTACCACTTAGACGTCTAGCAGGCACTTCCAGACATCCACCTCGCCAACCCCGTGTAGCTAGTATGGATAAAATATTAAATGACTTTTTCAAAACACGCAAAGAACCTTCTTCCCCTGCAGTTGTGACTGAAATACCCACTTCATCTATTACTGCACATTGTATTCCATCGTCTGGAATTTCTCAGGCAACTAATATTTCCAATGACACAAACAAAAGC-AATAATAATAATA-ACTCCGAACAAGATAAACGAGAAGCCCTTGCT-GTTGAACTAGCTAAAGC-TTCAGTGTCACCACAAGTTTATAATCATCCAGATAATATACCTTCAGACTTCACGCTACACGACAATTCTAATGTACGAATTACCTCAAGTGATCAGGTTTCTGCTCCTGTTGTAAACATTTGTGATGAAAGAATAATGGAATGTCATAAATTAGAAGGTACTGATCTTTATGTCAATAACGCTAATTCTTCCGATTACTCTGCTATAAATGTTTCAGACATCTCAGTCACTTCTGTTAGTGTAAATAATATGTTCCAAAGTGAGAATGAGACGCCACATTAAGGCTACTTAATAGTTGTGGTGTAAATTTTCAGTTAATAGAATATATTCCCAAACTCTGCTAACTAAATAATCGCATTTTTGTGAAATATTTATCCAACGGAAATACAAATGCGTAACTGTACATAAAAATTTTGTACACTGGGTACGTTTTATGTAATTTTTTTCCTGTTATCTAAATAAATAATTGA] [+] EMBL CD140072 [ATGGTATTGGCTGGTCTAAAAATCACATACAGTATTAATTTGAATGTCGGGAAGTAATTTTCGTCTGCTTGATGATGACACTCAGTTCATGGACAAGTATCCTAATGGGCTTTCTTTGGTTGATTTGCTGCCATTTTACGACTCCATATCTAAGAATGAACCGCTTAAATTAGAATGGGTTTGTCCAGGCAAAATCGATCCTAACGTTCAGAGGGAAACAACCAAAATTCGTACTGAAACAAATGATAATCCTGTCCCAAAGGTTTCTGAATCCTTGACTAGTATTGTAAAGTTAAAAGAGTTCGACTTCGATGAGTCTCCGAATCAACCATCTATTCCTTCAGTTCCACTTGGTGCTGCTG ] [+] EMBL CD083933 [ ggCAAATGATAATCCTGTCCCAAAGGTTTCTGAATCCTTGACTAGTATTGTAAAGTTAAAAGAGTTCGACTTCGATGAGTCTCCGAATCAACCATCTATTCCTTCAGTTCCACTTGGTGCTGCTGCTCAAAATGCAAACTTACCACTTAGACGTCTAGCAGGCACTTCCAGACATCCACCTCGCCAACCCCGTGTAGCTAGTATGGATAAAATATTAAATGACTTTTTCAAAACACGCAAAGAACCTTCTTCCCCTGCAGTTGTGACTGAAATACCCACTTCATCTATTACTGCACATTGTATTCCATCGTCTGGAATTTCTCAGGCAACTAATATTTCCAATGACACAAACAAAAGC AATAATAATAATA ACTCCGAACAAGATAAACGAGAAGCCCTTGCT GTTGAACTAGCTAAAGC TTCAGTGTCA ] [+] EMBL CD079138 [ CTCGCCAACCCCGTGTAGCTAGTATGGATAAAATATTAAATGACTTTTTCAAAACACGCAAAGAACCTTCTTCCCCTGCAGTTGTGACTGAAATACCCACTTCATCTATTACTGCACATTGTATTCCATCGTCTGGAATTTCTCAGGCAACTAATATTTCCAATGACACAAACAAAAGC AATAATAATAATA ACTCCGAACAAGATAAACGAGAAGCCCTTGCT GTTGAACTAGCTAAAGC TTCAGTGTCACCACAAGTTTATAATCATCCAGATAATATACCTTCAGACTTCACGCTACACGACAATTCTAATGTACGAATTACCTCAAGTGATCAGGTTTCTGCTCCTGTTGTAAACATTTGTGATGAAAGAATAATGGAATGTCATAAATTAGAAGGTACTGATCTTTATGTCAATAACGCTAATTCTTCCGATTACTCTGCTATAAATGTTTCAGACATCTCAGTCACTTCTGTTAGTGTAAATAATATGTTCCAAAGTGAGAATGAGACGCCACATTAAGGCTACTTAATAGTTGTGGTGTAAATTTTCAGTTAATAGAATATATTCCCAAACTCTGCTAACTAAATAATCGCATTNTTGTGAAATAT ] [-] EMBL CD074626 [ tTTCCATCGTCTGGAATTTCTCAGGCAACTAATATTTCCAATGACACAAACAAAAGC AATAATAATAATA ACTCCGAACAAGATAAACGAGAAGCCCTTGCT GTTGAACTAGCTATAGC TTCAGTGTCACCACAAGTTTATAATCATCCAGATAATATACCTTCAGACTTCACGCTACACGACAATTCTAATGTACGAATTACCTCAAGTGATCAGGTTTCTGCTCCTGTTGTAAACATTTGTGATGAAAGAATAATGGAATGTCATAAATTAGAAGGTACTGATCTTTATGTCAATAACGCTAATTCTTCCGATTACTCTGCTATAAATGTTTCAGACATCTCAGTCACTTCTGTTAGTGTAAATAATATGTTCCAAAGTGAGAATGAGACGCCACATTAAGGCTACTTAATAGTTGTGGTGTAAATTTTCAGTTAATAGAATATATTCCCAAACTCTGCTAACTAAATAATCGCATTTTTGTGAAATATTTATCCAACGGAAATACAAATGCGTAACTGTACATAAAAATTTTGTACACTGGGTACGTTTTATGTAATTTTTTTCCTGTTATCTAAATAAATAATTGA] [-] EMBL CD183011 [ atTATTTTCCATGCCNCAAAC AAAGCNNAT ATANTTATACTCCCCGACCAAGATAAACGAGAAGCCC TGCTGGTTGACNTAGCT AAGCTTTCAGTGTCACCACCAGTTTATAATCATCCAGATAATATACCTTCAGACTTCACGCTACACGACAATTCTAATGTACGAATTACCTCAAGTGATCAGGTTTCTGCTCCTGTTGTAAACATTTGTGATGAAAGAATAATGGAATGTCATAAATTAGAAGGTACTGATCTTTATGTCAATAACGCTAATTCTTCCGATTACTCTGCTATAAATGTTTCAGACATCTCAGTCACTTCTGTTAGTGTAAATAATATGTTCCAAAGTGAGAATGAGACGCCCCATTAAGGCTACTTAATAGTTGTGGTGTAAATTTTCAGTTAATAGAA ] [+] EMBL CD145655 [ TAAAGC TTCAGTGTCACCACAAGTTTATAATCATCCAGATAATATACCTTCAAACTTCACGCCACACGACAATTCTAATGTACAAATTACCTCAAGTGATCAGGTTTCTGCTCCTGTTGTAAACATTTGTGATGAAAGAATAATGGAATGTCATAAATTAAAAGGTACTGATCTTTATGTCAATAACGCTAATTCTTCCGATTACTCTGCTATAAATGTTTCAGACATCTCAGTCACTTCTGTTAGTGTAAATAATATGTTCCAAAGTGAGAATGAGACGCCACATTAAGGCTACTTAATAGTTGTGGTGTAAATTTTCAGTTAATAGAATATATTCCCAAACTCTGCTAACTAAATAATCGCATTTTTGTGA ] [-] EMBL CD182966 [ CAGGTTTCTGCTCCTGTTGTAAACATNTGTGATGAAAGAATAATGGAATGTCATAAATTAGAAGGTACTGATCTTTATGTCAATAACGCTAATTCTTCCGATTACTCTGCTATAAATGTTTCAGACATCTCAGTCACTTCTGTTAGTGTAAATAATATGTTCCAAAGTGAGAATGAGACGCCACATTAAGGCTACTTAATAGTTGTGTTGTAAATTTTCAGTTAATAGAA ] consensusID : consensus_10565#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 801 fasta sequence [TCGGCACGAGGGTTAAATATTCTGAGAATCACTCAGAATTATTTGATGAGTCGACTGGTTTTTCTTATGATCCTATGAGTCCTTTGGTTAAATGCTCTTATCTTCCTCGTCATTCCATTTGGTGTGAACCTCCCTTAGATTTAAGAAGTAATAAGTCCCAATATGATGAATTGAAATACGGATGCTTAAAATGGGGCGGAAAAGCAGCAGATTCAGTTGTGCTCACATCAATTGTGTGTCATGCTTTGGACAATATTGAGTGCTATGGGAATCGTACTTTCTTGTTACCTGATTATCCCTGTCTTCATTACAAAGGACATTACTTTGTAACAACATTCATATACAGCTTATTACTAGGATTTCTTGGTGTTGATCGACTATGTCTGGGTCATACAGGTACAGGCCTCGGTAAACTCCTAACATTGGGTGGGGCCGGTATTTGGTGGATAGTGGATATCGTTCTTCTCATTCGTGGTGATTTGGGTCCAGCTGATGGAAGTTCCTGGATGCCATTTTACTAGACTTATGTATTGGCTGGTCTAAAAATCACATACAGTATTAATTTGAATGTCGGGAAGTAATTTTCGTCTGCTTGATGATGACACTCAGTTCATGGACAAGTATCCTAATGGGCTTTCTTTGGTTGATTTGCTGCCATTTTACGACTCCATATCTAAGAATGAACCGCTTAAATTAGAATGGGTTTGTCCAGGGAAAATCGATCCT-AACGTTCAGAGGGAAA-GTGAGTTTGATTCAAAGTTAGGAAATAATTTGTTCTATGGTACTTACCCCTAAATAAAT] [+] EMBL CD080694 [TCGGCACGAGGGTTAAATATTCTGAGAATCACTCAGAATTATTTGATGAGTCGACTGGTTTTTCTTATGATCCTATGAGTCCTTTGGTTAAATGCTCTTATCTTCCTCGTCATTCCATTTGGTGTGAACCTCCCTTAGATTTAAGAAGTAATAAGTCCCAATATGATGAATTGAAATACGGATGCTTAAAATGGGGCGGAAAAGCAGCAGATTCAGTTGTGCTCACATCAATTGTGTGTCATGCTTTGGACAATATTGAGTGCTATGGGAATCGTACTTTCTTGTTACCTGATTATCCCTGTCTTCATTACAAAGGACATTACTTTGTAACAACATTCATATACAGCTTATTACTAGGATTTCTTGGTGTTGATCGACTATGTCTGGGTCATACAGGTACAGGCCTCGGTAAACTCCTAACATTGGGTGGGGCCGGTATTTGGTGGATAGTGGATATCGTTCTTCTCATTCGTGGTGATTTGGGTCCAGCTGATGGAAGTTCCTGGATGCCATTTTACTAGACTTATGTATTGGCTGGTCTAAAAATCACATACAGTATTAATTTGAATGTCGGGAAGTAATTTTCGTCTGCTTGATGATGACACTCAGTTCATGGACAAGTATCCTAATGGGCTNTCTTTGGTTGATTTGCTGCCATTNTACGACTCCATATCTAAGAATGAACCGCTTAAATTAGAATGGGNTTGTCCAGGGAAAATCGATCCTAAACG TCAGAGGGAAANGTGAG TTGATTTCAAG TANGAAAT ATTNNGTCTATGGTACTTA CCCTAANTAAn ] [+] EMBL CD080636 [ GTTAAATATTCTGAGAATCACTCAGAATTATTTGATGAGTCGACTGGTTTTTCTTATGATCCTATGAGTCCTTTGGTTAAATGCTCTTATCTTCCTCGTCATTCCATTTGGTGTGAACCTCCCTTAGATTTAAGAAGTAATAAGTCCCAATATGATGAATTGAAATACGGATGCTTAAAATGGGGCGGAAAAGCAGCAGATTCAGTTGTGCTCACATCAATTGTGTGTCATGCTTTGGACAATATTGAGTGCTATGGGAATCGTACTTTCTTGTTACCTGATTATCCCTGTCTTCATTACAAAGGACATTACTTTGTAACAACATTCATATACAGCTTATTACTAGGATTTCTTGGTGTTGATCGACTATGTCTGGGTCATACAGGTACAGGCCTCGGTAAACTCCTAACATTGGGTGGGGCCGGTATTTGGTGGATAGTGGATATCGTTCTTCTCATTCGTGGTGATTTGGGTCCAGCTGATGGAAGTTCCTGGATGCCATTTTACTAGACTTATGTATTGGCTGGTCTAAAAATCACATACAGTATTAATTTGAATGTCGGGAAGTAATTTTCGTCTGCTTGATGATGACACTCAGTTCATGGACAAGTATCCTAATGGGCTNTCTTTGGTTGATTTGCTGCCATTNTACGACTCCATATCTAAGAATGAACCGCTTNAATTAGAATGGGTTTGTCCAGGGAAAATCGATCCC TACGTTCAGAGGGAAA GTGAGTTTGATTC AAGTTAGGAAATAA TTGTTCTAT GTACTTACCCNTAAta ] [-] EMBL CD074547 [ TTAGATTTAAGAAGTAATAAGTCCCAATATGATGAATTGAAATACGGATGCTTAAAATGGGGCGGAAAAGCAGCAGATTCAGTTGTGCTCACATCAATTGTGTGTCATGCTTTGGACAATATTGAGTGCTATGGGAATCGTACTTTCTTGTTACCTGATTATCCCTGTCTTCATTACAAAGGACATTACTTTGTAACAACATTCATATACAGCTTATTACTAGGATTTCTTGGTGTTGATCGACTATGTCTGGGTCATACAGGTACAGGCCTCGGTAAACTCCTAACATTGGGTGGGGCCGGTATTTGGTGGATAGTGGATATCGTTCTTCTCATTCGTGGTGATTTGGGTCCAGCTGATGGAAGTTCCTGGATGCCATTTTACTAGACTTATGTATTGGCTGGTCTAAAAATCACATACAGTATTAATTTGAATGTCGGGAAGTAATTTTCGTCTGCTTGATGATGACACTCAGTTCATGGACAAGTATCCTAATGGGCTTTCTTTGGTTGATTTGCTGCCATTTTACGACTCCATATCTAAGAATGAACCGCTTAAATTAGAATGGGTTTGTCCAGGGAAAATCGATCCT AACGTTCAGAGGGAAA GTGAGTTTGATTCAAAGTTAGGAAATAATTTGTTGTATGGTACTTACCCCTAAATAAAT] [-] EMBL CD074536 [ TTTAAGAAGTAATAAGTCCCAATATGATGAATTGAAATACGGATGCTTAAAATGGGGCGGAAAAGCAGCAGATTCAGTTGTGCTCACATCAATTGTGTGTCATGCTTTGGACAATATTGAGTGCTATGGGAATCGTACTTTCTTGTTACCTGATTATCCCTGTCTTCATTACAAAGGACATTACTTTGTAACAACATTCATATACAGCTTATTACTAGGATTTCTTGGTGTTGATCGACTATGTCTGGGTCATACAGGTACAGGCCTCGGTAAACTCCTAACATTGGGTGGGGCCGGTATTTGGTGGATAGTGGATATCGTTCTTCTCATTCGTGGTGATTTGGGTCCAGCTGATGGAAGTTCCTGGATGCCATTTTACTAGACTTATGTATTGGCTGGTCTAAAAATCACATACAGTATTAATTTGAATGTCGGGAAGTAATTTTCGTCTGCTTGATGATGACACTCAGTTCATGGACAAGTATCCTAATGGGCTTTCTTTGGTTGATTTGCTGCCATTTTACGACTCCATATTTAAGAATGAACCGCTTAAATTAGAATGGGTTTGTCCAGGGAAAATCGATCCT AACGTTCAGAGGGAAA GTGAGTTTGATTCAAAGTTAGGAAATAATTTGTTGTATGGTACTTACCCCTAAATAAAT] [-] EMBL CD074618 [ ATAAGTCCCAATATGATGAATTGAAATACGGATGCTTAAAATGGGGCGGAAAAGCAGCAGATTCAGTTGTGCTCACATCAATTGTGTGTCATGCTTTGGACAATATTGAGTGCTATGGGAATCGTACTTTCTTGTTACCTGATTATCCCTGTCTTCATTACAAAGGACATTACTTTGTAACAACATTCATATACAGCTTATTACTAGGATTTCTTGGTGTTGATCGACTATGTCTGGGTCATACAGGTACAGGCCTCGGTAAACTCCTAACATTGGGTGGGGCCGGTATTTGGTGGATAGTGGATATCGTTCTTCTCATTCGTGGTGATTTGGGTCCAGCTGATGGAAGTTCCTGGATGCCATTTTACTAGACTTATGTATTGGCTGGTCTAAAAATCACATACAGTATTAATTTGAATGTCGGGAAGTAATTTTCGTCTGCTTGATGATGACACTCAGTTCATGGACAAGTATCCTAATGGGCTTTCTTTGGTTGATTTGCTGCCATTTTACGACTCCATATCTAAGAATGAACCGCTTAAATTAGAATGGGTTTGTCCAGGGAAAATCGATCCT AACGTTCAGAGGGAAA GTGAGTTTGATTCAAAGTTAGGAAATAATTTGTTCGATGGTACTTACCCCTAAAAAAAT] [+] EMBL CD182960 [ GAATTGAAATACGGATGCTTAAAATGGGGCGGAAAAGCAGCAGATTCAGTTGTGCTCACATCAATTGTGTGTCATGCTTTGGACAATATTGAGTGCTATGGGAATCGTACTTTCTTGTTACCTGATTATCCCTGTCTTCATTACAAAGGACATTACTTTGTAACAACATTCATATACAGCTTATTACTAGGATTTCTTGGTGTTGATCGACTATGTCTGGGTCATACAGG ] consensusID : consensus_10565#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 739 fasta sequence [ANACTCTTGGCTCGAGGACTTCATGGACAAGTATCCTAATGGGCTTTCTTTGGTTGATTTGCTGCCATTTTACGACTCCATATCTAAGAATGAACCGCTTAAATTAGAATGGGTTTGTCCAGGGAAAATCGATCCTAACGTTCAGAGGGAAACAACCAAAATTCGTACTGAAACAAATGATAATCCTGTCCCAAAGGTTTCTGAATCCTTGACTAGTATTGTAAAGTTAAAAGAGTTCGACTTCGATGAGTCTCCGAATCAACCATCTATTCCTTCAGTTCCACTTGGTGCTGCTGCTCAAAATGCAAACTTACCACTTAGACGTCTAGCAGGCACTTCCAGACATCCACCTCGCCAACCCCGTGTAGCTAGTATGGATAAAATATTAAATGACTTTTTCAAAACACGCAAAGAACCTTCTTCCCCTGCAGTTGTGACTGAAATACCCACTTCATCTATTACTGCACATTGTATTCCATCGTCTGGAATTTCTCAGGCAACTAATATTTCCAATGACACAAACAAAAGCAATAATAATAATAACTCCGAACAAGATAAACGAGAAGCCCTTGCTGTTGAACTAGCTATAGCTTCAGTGTCACCACAAGTTTATAATCATCCAGATAATATACCTTCAGACTTCACGCTACACGACAATTCTAATGTACGAATTACCTCAAGTGATCANGTTTCTGCTCCTGTTGTAAACATTTGTGATGAAAGAATAATGGAATGTCAT] [+] EMBL CD080701 [ANACTCTTGGCTCGAGGACTTCATGGACAAGTATCCTAATGGGCTTTCTTTGGTTGATTTGCTGCCATTTTACGACTCCATATCTAAGAATGAACCGCTTAAATTAGAATGGGTTTGTCCAGGGAAAATCGATCCTAACGTTCAGAGGGAAACAACCAAAATTCGTACTGAAACAAATGATAATCCTGTCCCAAAGGTTTCTGAATCCTTGACTAGTATTGTAAAGTTAAAAGAGTTCGACTTCGATGAGTCTCCGAATCAACCATCTATTCCTTCAGTTCCACTTGGTGCTGCTGCTCAAAATGCAAACTTACCACTTAGACGTCTAGCAGGCACTTCCAGACATCCACCTCGCCAACCCCGTGTAGCTAGTATGGATAAAATATTAAATGACTTTTTCAAAACACGCAAAGAACCTTCTTCCCCTGCAGTTGTGACTGAAATACCCACTTCATCTATTACTGCACATTGTATTCCATCGTCTGGAATTTCTCAGGCAACTAATATTTCCAATGACACAAACAAAAGCAATAATAATAATAACTCCGAACAAGATAAACGAGAAGCCCTTGCTGTTGAACTAGCTATAGCTTCAGTGTCACCACAAGTTTATAATCATCCAGATAATATACCTTCAGACTTCACGCTACACGACAATTCTAATGTACGAATTACCTCAAGTGATCANGTTTCTGCTCCTGTTGTAAACATTTGTGATGAAAGAATAATGGAATGTCAT] [+] EMBL CD189621 [ GCTGCCATTTTACGACTCCATATCTAAGAATGAACCGCTTAAATTAGAATGGGTTTGTCCAGGGAAAATCGATCCTAACGTTCAGAGGGAAACAACCAAAATTCGTACTGAAACAAATGATAATCCTGTCCCAAAGGTTTCTGAATCCTTGACTAGTATTGTAAAGTTAAAAGAGTTCGACTTCGATGAGTCTCCGAATCAACCATCTATTCCTTCAGTTCCACTTGGTGCTGCTGCTCAAAATGCAAACTTACCACTT ] [-] EMBL CD124874 [ CCGCTTAAATTAGAATGGGTTTGTCCAGGGAAAATCGATCCTAACGTTCAGAGGGAAACAACCAAAATTCGTACTGAAACAAATGATAATCCTGTCCCAAAGGTTTCTGAATCCTTGACTAGTATTGTAAAGTTAAAAGAGTTCGACTTCGATGAGTCTCCGAATCAACCATCTATTCCTTCAGTTCCACTTGGTGCTGCTGCTCAAAATGCAAACTTACCACTTAGACGTCTAGCAGGCACTTCCAGACATCCACCTCGCCAACCCCGTGTAGCTAGTATGGATAAAATATTAAATGACTTTTTCAAAACACGCAAAGAACCTTCTTCCCCTGCAGTTGTGTCTGAAATACCCACTTCATCTATTACTGCACATTGTATTCCATCGTCTGGAATTTCTCAGGCAACTAATATTTCCAATGACACAAACAAAAGCAATAATAATAATAACTCCGAACAAGATAAACGAGTAGCCCTTGCTGTTGAACTAGCTAAAGCTTCAGTGTCACCACAAG ] consensusID : consensus_10565#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 619 fasta sequence [TATATGAGCATTTTATTTAGTTGAAAAAAGACCTATTNTGCTGAGCAATTAACTATGTTGTCTGATGTCAGTCCAATTGGGGAATCACATCAATAATTTGTTCTCGTGAGTAGTAATCACACGATCACCTCGGATGATTGCATACCACCTATTGACTAGCATTGGATTCATTCACTTAGTGCAAACGCCCGTTCAGAAAAACCTTATAATGCGAACTGATAAAACCATTGATACTTCTTGTTAGCTACAATTACGATCCATTTGTAAGTCGTCACTATTCTATTTTACTCTCCTCAATTCTTTTGTGGTTAACTGTAGATATTCAATATTCCTTTTTCTTCATTTTCTTAAAAAAATTTTATAGCAACCAAAATTCGTACTGAAACAAATGATAATCCTGTCCCAAAGGTTTCTGAATCCTTGACTAGTATTGTAAAGTTAAAAGAGTTCGACTTCGATGAGTCTCCGAATCAACCATCTATTCCTTCAGTTCCACTTGGTGCTGCTGCTCAAAATGCAAACTTACCACTTAGACGTCTAGCAGGCACTTCCAGACATCCACCTCGCCAACCCCGTGTAGCTAGTATGGATAAAATATTAAATGACTTTTTCAAAACAC] [-] EMBL CD085474 [TATATGAGCATTTTATTTAGTTGAAAAAAGACCTATTNTGCTGAGCAATTAACTATGTTGTCTGATGTCAGTCCAATTGGGGAATCACATCAATAATTTGTTCTCGTGAGTAGTAATCACACGATCACCTCGGATGATTGCATACCACCTATTGACTAGCATTGGATTCATTCACTTAGTGCAAACGCCCGTTCAGAAAAACCTTATAATGCGAACTGATAAAACCATTGATACTTCTTGTTAGCTACAATTACGATCCATTTGTAAGTCGTCACTATTCTATTTTACTCTCCTCAATTCTTTTGTGGTTAACTGTAGATATTCAATATTCCTTTTTCTTCATTTTCTTAAAAAAATTTTATAGCAACCAAAATTCGTACTGAAACAAATGATAATCCTGTCCCAAAGGTTTCTGAATCCTTGACTAGTATTGTAAAGTTAAAAGAGTTCGACTTCGATGAGTCTCCGAATCAACCATCTATTCCTTCAGTTCCACTTGGTGCTGCTGCTCAAAATGCAAACTTACCACTTAGACGTCTAGCAGGCACTTCCAGACATCCACCTCGCCAACCCCGTGTAGCTAGTATGGATAAAATATTAAATGACTTTTTCAAAACAC] consensusID : consensus_10565#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 271 fasta sequence [GGACATTACTTTGTAACAACATTCATATACAGCTTATTACTAGGATTTCTTGGTGTTGATCGACTATGTCTGGGTCATACAGGTACAGGCCTCGGTAAACTCCTAACATTGGGTGGGGCCGGTATTTGGTGGATAGTGGATATCGTTCTTCTCATTCGTGGTGATTTGGGTCCAGCTGATGGAAGTTCCTGGATGCCATTTTACTAGACTTATGTAAAATTGCTCATTAAAAAACTTAATTCCTACTGTCTTGCTTTGTTTTAAGGTATTG] [+] EMBL CD180131 [GGACATTACTTTGTAACAACATTCATATACAGCTTATTACTAGGATTTCTTGGTGTTGATCGACTATGTCTGGGTCATACAGGTACAGGCCTCGGTAAACTCCTAACATTGGGTGGGGCCGGTATTTGGTGGATAGTGGATATCGTTCTTCTCATTCGTGGTGATTTGGGTCCAGCTGATGGAAGTTCCTGGATGCCATTTTACTAGACTTATGTAAAATTGCTCATTAAAAAACTTAATTCCTACTGTCTTGCTTTGTTTTAAGGTATTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10565#0 ------------------------------------------------------------ consensus_10565#2 ------------------------------------------------------------ consensus_10565#3 TATATGAGCATTTTATTTAGTTGAAAAAAGACCTATTNTGCTGAGCAATTAACTATGTTG 60 consensus_10565#1 ------------------------------------------------------TCGGCA 6 consensus_10565#4 ------------------------------------------------------------ consensus_10565#0 ------------------------------------------------------------ consensus_10565#2 ------------------------------------------------------------ consensus_10565#3 TCTGATGTCAGTCCAATTGGGGAATCACATCAATAATTTGTTCTCGTGAGTAGTAATCAC 120 consensus_10565#1 CGAGGGTTAAATATTCTGAGAATCACTCAGAATTATTTGATGAGTCGACTGGTTTTTCTT 66 consensus_10565#4 ------------------------------------------------------------ consensus_10565#0 ---ATGGTATTGGCTGGTCTAAAAATCACATACAGTATTAATTTGAATGTCGGGAAGTAA 57 consensus_10565#2 -----------------------------------------------------------A 1 consensus_10565#3 ACGATCACCTCGGATGAT-TGCATACCACCTATTGACTAGCATTGGATTCATTCACTTAG 179 consensus_10565#1 ATGATCCTATGAGTCCTTTGGTTAAATGCTCTTATCTTCCTCGTCATTCCATTTGGTGTG 126 consensus_10565#4 ------------------------------------------------------------ consensus_10565#0 TTTT--CGTCTGCTTGATGATGACACTCAGTTC------ATGGACAAGTATCCTAATGGG 109 consensus_10565#2 NACT--C-TTGGCTCGAGGAC---------TTC------ATGGACAAGTATCCTAATGGG 43 consensus_10565#3 TGCAAACGCCCGTTCAGAAAAACCTTATAATGCGA----ACTGATAAAACCATTGATACT 235 consensus_10565#1 AACCTCCCTTAGATTTAAGAAGTAATAAGTCCCAATATGATGAATTGAAATACGGATGCT 186 consensus_10565#4 ------------------------------------------------------------ consensus_10565#0 CTTTCTTTGGTTGATTTGCTGCCATTTTACGACTC--CATATCTAAGAATGAACCGCTTA 167 consensus_10565#2 CTTTCTTTGGTTGATTTGCTGCCATTTTACGACTC--CATATCTAAGAATGAACCGCTTA 101 consensus_10565#3 TCTTGTTAGCTACAATTACGATCCATTTGTAAGTCGTCACTATTCTATTTTACTCTCCTC 295 consensus_10565#1 TAAAATGGGGCGGAAAAGCAGCAGATTCAGTTGTGCTCACATCAATTGTGTGTCATGCTT 246 consensus_10565#4 ------------------------------------------------------------ consensus_10565#0 AATTAGAATGGGTTTGTCCAGGCAAAATCGAT----------CCTAACGTTCAGAGGGAA 217 consensus_10565#2 AATTAGAATGGGTTTGTCCAGGGAAAATCGAT----------CCTAACGTTCAGAGGGAA 151 consensus_10565#3 AATTCTTTTGTGGTTAACTGTAGATATTCAATATTCCTTTTTCTTCATTTTCTTAAAAAA 355 consensus_10565#1 TGGACAATATTGAGTG-CTATGGGAATCGTACTTTCTTGTTACCTGATTATCCCTGTCTT 305 consensus_10565#4 ------------------------------------------------------------ consensus_10565#0 A--------CAACCAAAATTCGTACTGAAACAAATGATAATCCTGTCCCAAAGGTTTCTG 269 consensus_10565#2 A--------CAACCAAAATTCGTACTGAAACAAATGATAATCCTGTCCCAAAGGTTTCTG 203 consensus_10565#3 ATTTTATAGCAACCAAAATTCGTACTGAAACAAATGATAATCCTGTCCCAAAGGTTTCTG 415 consensus_10565#1 CATTACAAAGGACATTACTTTGTAACAACATTCATATACAGCTTATTACTAGGATTTCTT 365 consensus_10565#4 ---------GGACATTACTTTGTAACAACATTCATATACAGCTTATTACTAGGATTTCTT 51 ** * ** *** * * ** * * * * * * * ***** consensus_10565#0 AATCCTTGACTAGTATTGTAAAGTTAAAAGAGTTC-GACTTCGATGAGTCTCCGA-ATCA 327 consensus_10565#2 AATCCTTGACTAGTATTGTAAAGTTAAAAGAGTTC-GACTTCGATGAGTCTCCGA-ATCA 261 consensus_10565#3 AATCCTTGACTAGTATTGTAAAGTTAAAAGAGTTC-GACTTCGATGAGTCTCCGA-ATCA 473 consensus_10565#1 GGTGTTGATCGACTATGTCTGGGTCATACAGGTACAGGCCTCGGTAAACTCCTAACATTG 425 consensus_10565#4 GGTGTTGATCGACTATGTCTGGGTCATACAGGTACAGGCCTCGGTAAACTCCTAACATTG 111 * * * * *** ** * * ** * * * *** * * * * ** consensus_10565#0 ACCAT--CTATTCCTTCAGTTCCACTTGGTGCTGCTGCTCAAAATGCAAACTTACCACTT 385 consensus_10565#2 ACCAT--CTATTCCTTCAGTTCCACTTGGTGCTGCTGCTCAAAATGCAAACTTACCACTT 319 consensus_10565#3 ACCAT--CTATTCCTTCAGTTCCACTTGGTGCTGCTGCTCAAAATGCAAACTTACCACTT 531 consensus_10565#1 GGTGGGGCCGGTATTTGGTGGATAGTGGATATCGTTCTTCTCATTC----GTGGTGATTT 481 consensus_10565#4 GGTGGGGCCGGTATTTGGTGGATAGTGGATATCGTTCTTCTCATTC----GTGGTGATTT 167 * * ** * * * * * * ** * * * * ** consensus_10565#0 AGA--CGTCTAGCAGGCACTTCCAGACATCCACCTCGCCAACCCCGTGTAGCTAGTATGG 443 consensus_10565#2 AGA--CGTCTAGCAGGCACTTCCAGACATCCACCTCGCCAACCCCGTGTAGCTAGTATGG 377 consensus_10565#3 AGA--CGTCTAGCAGGCACTTCCAGACATCCACCTCGCCAACCCCGTGTAGCTAGTATGG 589 consensus_10565#1 GGGTCCAGCTGATGGAAGTTCCTGGATG-CCATTTTACTAGACTTATGTAT--TGGCTGG 538 consensus_10565#4 GGGTCCAGCTGATGGAAGTTCCTGGATG-CCATTTTACTAGACTTATGTAAAATTGCTCA 226 * * ** * * * ** *** * * * * **** * consensus_10565#0 ATAAAATATTAAATGACTTTTTCAAAACACGCAAAGAACCTTCTTCCCCTGCAGTTGTGA 503 consensus_10565#2 ATAAAATATTAAATGACTTTTTCAAAACACGCAAAGAACCTTCTTCCCCTGCAGTTGTGA 437 consensus_10565#3 ATAAAATATTAAATGACTTTTTCAAAACAC------------------------------ 619 consensus_10565#1 TCTAAAAATCACAT-ACAGTATTAATTTGAAT-GTCGGGAAGTAATTTTCGTCTGCTTGA 596 consensus_10565#4 TTAAAAAACTTAAT-TCC-TACTGTCTTGCTTTGTTTTAAGGTATTG------------- 271 *** * ** * * consensus_10565#0 CTGAAATACCCACTTCATCTATTACTGCACATTGTATTCCATCGTCTGGAATTTCTCAGG 563 consensus_10565#2 CTGAAATACCCACTTCATCTATTACTGCACATTGTATTCCATCGTCTGGAATTTCTCAGG 497 consensus_10565#3 ------------------------------------------------------------ consensus_10565#1 TGATGACACTCAGTTCATGGACAAGTATCCTAATGGGCTTTCTTTGGTTGATTTGCTGCC 656 consensus_10565#4 ------------------------------------------------------------ consensus_10565#0 CAACTAATATTTCCAATGACACAAACAAAAGCAATAATAATAATAACTCCGAACAAGATA 623 consensus_10565#2 CAACTAATATTTCCAATGACACAAACAAAAGCAATAATAATAATAACTCCGAACAAGATA 557 consensus_10565#3 ------------------------------------------------------------ consensus_10565#1 ATTTTACGACTCCATATCTAAGAATGAACCGCTTAAATTAGAATGGGTTTGTCCAGGGAA 716 consensus_10565#4 ------------------------------------------------------------ consensus_10565#0 AACGAGAAGCCCTTGCTGTTGAACTAGCTAAAGCTTCAGTGTCACCACAAGTTTATAATC 683 consensus_10565#2 AACGAGAAGCCCTTGCTGTTGAACTAGCTATAGCTTCAGTGTCACCACAAGTTTATAATC 617 consensus_10565#3 ------------------------------------------------------------ consensus_10565#1 AATCGATCCTAACGTTCAGAGGGAAAGTGAGTTTGATTCAAAGTTAGGAAATAATTTGTT 776 consensus_10565#4 ------------------------------------------------------------ consensus_10565#0 ATCCAGATAATATACCTTCAGACTTCACGCTACACGACAATTCTAATGTACGAATTACCT 743 consensus_10565#2 ATCCAGATAATATACCTTCAGACTTCACGCTACACGACAATTCTAATGTACGAATTACCT 677 consensus_10565#3 ------------------------------------------------------------ consensus_10565#1 CTATGGTACTTACCCCTAAATAAAT----------------------------------- 801 consensus_10565#4 ------------------------------------------------------------ consensus_10565#0 CAAGTGATCAGGTTTCTGCTCCTGTTGTAAACATTTGTGATGAAAGAATAATGGAATGTC 803 consensus_10565#2 CAAGTGATCANGTTTCTGCTCCTGTTGTAAACATTTGTGATGAAAGAATAATGGAATGTC 737 consensus_10565#3 ------------------------------------------------------------ consensus_10565#1 ------------------------------------------------------------ consensus_10565#4 ------------------------------------------------------------ consensus_10565#0 ATAAATTAGAAGGTACTGATCTTTATGTCAATAACGCTAATTCTTCCGATTACTCTGCTA 863 consensus_10565#2 AT---------------------------------------------------------- 739 consensus_10565#3 ------------------------------------------------------------ consensus_10565#1 ------------------------------------------------------------ consensus_10565#4 ------------------------------------------------------------ consensus_10565#0 TAAATGTTTCAGACATCTCAGTCACTTCTGTTAGTGTAAATAATATGTTCCAAAGTGAGA 923 consensus_10565#2 ------------------------------------------------------------ consensus_10565#3 ------------------------------------------------------------ consensus_10565#1 ------------------------------------------------------------ consensus_10565#4 ------------------------------------------------------------ consensus_10565#0 ATGAGACGCCACATTAAGGCTACTTAATAGTTGTGGTGTAAATTTTCAGTTAATAGAATA 983 consensus_10565#2 ------------------------------------------------------------ consensus_10565#3 ------------------------------------------------------------ consensus_10565#1 ------------------------------------------------------------ consensus_10565#4 ------------------------------------------------------------ consensus_10565#0 TATTCCCAAACTCTGCTAACTAAATAATCGCATTTTTGTGAAATATTTATCCAACGGAAA 1043 consensus_10565#2 ------------------------------------------------------------ consensus_10565#3 ------------------------------------------------------------ consensus_10565#1 ------------------------------------------------------------ consensus_10565#4 ------------------------------------------------------------ consensus_10565#0 TACAAATGCGTAACTGTACATAAAAATTTTGTACACTGGGTACGTTTTATGTAATTTTTT 1103 consensus_10565#2 ------------------------------------------------------------ consensus_10565#3 ------------------------------------------------------------ consensus_10565#1 ------------------------------------------------------------ consensus_10565#4 ------------------------------------------------------------ consensus_10565#0 TCCTGTTATCTAAATAAATAATTGA 1128 consensus_10565#2 ------------------------- consensus_10565#3 ------------------------- consensus_10565#1 ------------------------- consensus_10565#4 ------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||