cluster # 10567

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Schistosoma mansoni
cluster # 10567 cluster # 10567 Sequences # 18 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10567#0 length = 1334 sequences # 13

consensus_10567#1 length = 665 sequences # 4
consensus_10567#2 length = 291 sequences # 1

consensusID : consensus_10567#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1334
fasta sequence

                              [GTATTGTAAGACATGTGTATAAGATTTTCATCAAAAGTTGATGATCCATATGCTAATAATCCAAGTCATAAAGCATTTACTCGGGCGTTTCTATCAAAATCTACTGTAGAATTTGGTCAGGAC-ACTTTTTA-ACATGTCCACTTGGTATACTATTCACACTTGGTATTCTATTAGGTTCTGGTGGTGCTCAAGGTAAAACAGGTCATCAAATTGGAAAAGCAATAAGATTGAAATCAACATCATCTTCATGGAATCCATTTGGTGCTCAAGAAGAAATGAAATCATTATATAAAGAACTTAATGATTCACTTGGTTCAGAGAAAACATTTATAGATGACAAAGAAGAAAAGGTTGTTAGAATATCAACAGGTCTATTTGTACAAAGGACATATGAGATTGAAACAAGTTTTAATGAAAGTATTAAAAATGATTTTAAAGGAGAACTTATACCGGTGAATTTCTTAAATCGAACTAGTGCTACACTTAGTATCAATCGTTGGGTTGATCAACAGTCTAATGGTTTATTGGAAAAATTCTTTATGGATGATATACCAGATGATACTGGAATGATATTGGTAAATGTTTTTTATTTTAGAGATTTTTGGGAAAGTCCATTTGAGCCTCATTACACTAAGATAGAG-AATTTTGATATTTCACCAAATCGTCAAATCAAAGTACCTATGATGATGAAAGAAGAAGTATTGCATTATGGAAAATTCGAAAATCAAGGATTTGAAATCGTCAGTAAACCATTAAATAACACACGTTTCACATTTGTTGTCGTATTACCTCTTGAAAAATGGTCTCTAACTGGTGCCATGGAACTTTTGAATGGGAATAAAATTCTAAGTGAATACATAAAGAAATTAAAAGAAACTACAGTATCATTAAGATTACCAAAATTTACATTGAAAAATACACTTGATCTTGTGCAAACATTGAAATCTATGGGTATTGTCGATTTGTTTAATCCAGTAGCAGCTAATCTATCAGGAATCACCCATGATCATCAATTATATGTGGATAAATTTATGCAAACTAATATATTAAAATTAAATGAAAGTGGTATTGAAGCAACCACTGTTACATCACCTATATTTGTACCGATTTCAGCTGTATTACCAGATATTGATTTTAATGTAAATCATCCATTTATATGCTTTATATATGATCAACAATTAACAATGCCAATCATAGCTGCGAAAGTTATTGAACCAATTATATCATCATAATTGAATTGAATTATAACACTGGTTGCCATAGTAACTATTTGTTTGAATGTAATTCACTTTATATTTTTTAATGAATTAATCAATAAATGAAGATTATTGATT]

[+] EMBL AI977178             [GTATTGTAAGACATGTGTATAAGATTTTCATCAAAAGTTGATGATCCATATGCTAATAATCCAAGTCATAAAGCATTTACTCGGGCGTTTCTATCAAAATCTACTGTAGAATTTGGTCAGGACAACTTTTTA ACATGTCCACTTGGTATACTATTCACACTTGGTATTCTATTAGGTTCTGGTGGTGCTCAAGGTAAAACAGGTCATCAAATTGGAAAAGCAATAAGATTGAAATCAACATCATCTTCATGGAATCCATTTGGTGCTCAAGAAGAAATGAAATCATTATATAAAGAACTTAATGATTCACTTGGTTCAGAGAAAACATTTATAGATGACAAAGAAGAAAAGGTTGTTAGAATATCAACAGGTCTATTTGTACAAAGGACATATGAGATTGAAACAAGTTTTAATGAAAGTATTAAAAATGATTTTAAAGGAGAACTTATACCGGTGAATTTCTTAAATCGAACTAGTGCTACACTTAGTATCAATCGTTGGGTTGATCAACAGTCTAATGGTTTATTGGAAAAATTCTTTATGGATGATATACCAGATGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD196712             [                            CATCAAAAGTTGATGATCCATATGCTAATAATCCAAGTCATAAAGCATTTACTCGGGCGTTTCTATCAGAATCTACTGTAGAATTTGGTCAGGACAACTTTTTA ACATGTCCACTTGGTATACTATTCACACTTGGTATTCTATTAGGTTCTGGTGGTGCTCAAGGTAAAACAGGTCATCAAATTGGAAAAGCGATAAGATTGAAATCAACATCATCTTCATGGAATCCATTTGGTGCTCAAGAAGAAATGAAATCATTATATAAAGAACTTAATGATTCACTTGGCTCAGAGAAAACATTTATAGATGACAAAGAAGAAAAGGTTGTTAGAATATCAACAGGTCTATTTGTACAAAGGACATATGAGATTGAAACAAGTTTTAATGAAAGTATTAAAAATGATTTTAAAGGAGAACTTATACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL SMSPIB               [                                                                                                      ACTGTAGAATTTGGTCAGGAC ACTTTTTACACATGTCCACTTGGTATACTATTCACACTTGGTATTCTATTAGGTTCTGGTGGTGCTCAAGGTAAAACAGGTCATCAAATTGGAAAAGCAATAAGATTGAAATCAACATCATCTTCATGGAATCCATTTGGTGCTCAAGAAGAAATGAAATCATTATATAAAGAACTTAATGATTCACTTGGTTCAGAGAAAACATTTATAGATGACAAAGAAGAAAAGGTTGTTAGAATATCAACAGGTCTATTTGTACAAAGGACATATGAGATTGAAACAAGTTTTAATGAAAGTATTAAAAATGATTTTAAAGGAGAACTTATACCGGTGAATTTCTTAAATCGAACTAGTGCTACACTTAGTATCAATCGTTGGGTTGATCAACAGTCTAATGGTTTATTGGAAAAATTCTTTATGGATGATATACCAGATGATACTGGAATGATATTGGTAAATGTTTTTTATTTTAGAGATTTTTGGGAAAGTCCATTTGAGCCTCATTACACTAAGATAGAG AATTTTGATATTTCACCAAATCGTCAAATCAAAGTACCTATGATGATGAAAGAAGAAGTATTGCATTATGGAAAATTCGACAATCAAGGATTTGACATCGTCAGTAAACCATTAAATAACACACGTTTCACATTTCTTGTCGTATTACCTCTTGAAAAATGGTCTCTAACTGGTGCCATGGAACTTTTGAATGGGAATAAAATTCTAAGTGAATACATAAAGAAATTAAAAGAAACTACAGTATCATTAAGATTACCAAAATTTACATTGAAAAATACACTTGATCTTGTGCAAACATTGAAATCTATGGGTATTGTCGATTTGTTTAATCCAGTAGCAGCTAATCTATCAGGAATCACCCATGATCATCAATTATATGTGGATAAATTTATGCAAACTAATATATTAAAATTAAATGAGAGTGGTATTGAAGCAACCACTGTTACATCACCTATATTTGTACCGATTTCAGCTGTATTACCAGATATTGATTTTAATGTAAATCATCCATTTATATGCTTTATATATGATCAACAATTAACAATGCCAATCATAGCTGCGAAAGTTATTGAACCAATTATATCATCATAATTGAATTGAATTATAACACTGGTTGCCATAGTAACTATTTGTTTGAATGTAATTCACTTTATATTTTTTAATGAATTAATCAATAAATGAAGATTATTGAT ]
[+] EMBL AI976825             [                                                                                                                                                              CACTTGGTATTCTATTAGGTTCTGGTGGTGCTCAAGGTAAAACAGGTCATCAAATTGGAAAAGCAATAAGATTGAAATCAACATCATCTTCATGGAATCCATTTGGTGCTCAAGAAGAAATGAAATCATTATATAAAGAACTTAATGATTCACTTGGTTCAGAGAAAACATTTATAGATGACAAAGAAGAAAAGGTTGTTAGAATATCAACAGGTCTATTTGTACAAAGGACATATGAGATTGAAACAAGTTTTAATGAAAGTATTAAAAATGATTTTAAAGGAGAACTTATACCGGTGAATTTCTTAAATCGAACTAGTGCTACACTTAGTATCAATCGTTGGGTTGATCAACAGTCTAATGGTTTATTGGAAAAATTCTTTATGGATGATATACCAGATGATACTGGAATGATATTGGTAAATGTTTTTTATTTTAGAGATTTTTGGGAAAGTCCATTTGAGCCTCATTACACTAAGATAGAG AATTTTGATATTTCACCAAATCGTCAAATCAAAGTACCTATGATGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AI977299             [                                                                                                                                                                                                                                 AAGATTGAAATCAACATCATCTTCATGGAATCCATTTGGTGCTCAAGAAGAAATGAAATCATTATATAAAGAACTTAATGATTCACTTGGTTCAGAGAAAACATTTATAGATGACAAAGAAGAAAAGGTTGTTAGAATATCAACAGGTCTATTTGTACAAAGGACATATGAGATTGAAACAAGTTTTAATGAAAGTATTAAAAATGATTTTAAAGGAGAACTTATACCGGTGAATTTCTTAAATCGAACTAGTGCTACACTTAGTATCAATCGTTGGGTTGATCAACAGTCTAATGGTTTATTGGAAAAATTCTTTATGGATGATATACCAGATGATACTGGAATGATATTGGTAAATGTTTTTTATTTTAGAGATTTTTGGGAAAGTCCATTTGAGCCTCATTACACTAAGATAGAG AATTTTGATATTTCACCAAATCGTCAAATCAAAGTACCTATGATGATGAAAGAAGAAGTATTGCATTATGGAAAATTCGAAAATCAAGGATTTGAAATCGTCAGTAAACCATTAAATAACACACGTTTCACATTTGNTGTCGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD167060             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             acccGTAAATGTTTTTTATTTTAGAGATTTTTGGGAAAGTCCATTTGAGCCTCATTACACTAAGATAGAG AATTTTGATATTTCCCCAAATCGTCAAATCAAAGTACCTATGATGATGAAAGACCCAGCATTGCATTATGGAAAATTCGAAAATCAAGGATTGGAAATCGTCAGTAAACCATTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL SM211                [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGCCTCATTACACTAAGATAGAGNAATTTNGATATTTCACCAAATCGTCAAATCAAAGTACCTATGATGATGAAAGAAGAAGTATTGCATTATGGAAAATTCGAAAATCAAGGATTTGAAATCGTCAGTAAACCATTANATAACACACGTNTCACATTTGTTGTCGTATTACCTCTTGAAAAATGGTCTCTAACTGGTGCCATGGAACTNNTGANTGGGAATAAAATTCTAAGTGAATACATAAAGAAATTAAAAGAAACTACAGNATCATTAAGATTACCAAAATTTACATGGACAACTACACTTGATCTTGTGCAAACATCGACATCTATGGGTATTGNCGATTTG                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD074492             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTTGATA TTCACCAAATCGTCAAATCAAAGTACCTATGATGATGAAAGAAGAAGTATTGCATTATGGAAAATTCGAAAATCAAGGATTTGAAATCGTCAGTAAACCATTAAATAACACACGTTTCACATTTGTTGTCGTATTACCTCTTGAAAAATGGTCTCTAACTGGTGCCATGGAACTTTTGAATGGGAATAAAATTCTAAGTGAATACATAAAGAAATTAAAAGAAACTACAGTATCATTAAGATTACCAAAATTTACATTGAAAAATACACTTGATCTTGTGCAAACATTGAAATCTATGGGTATTGTCGATTTGTTTAATCCAGTAGCAGCTAATCTATCAGGAATCACCCATGATCATCAATTATATGTGGATAAATTTATGCAAACTAATATATTAAAATTAAATGAAAGTGGTATTGAAGCAACCACTGTTACATCACCTATATTTGTACCGATTTCAGCTGTATTACCAGATATTGATTTTAATGTAAATCATCCATTTATATGCTTTATATATGATCAACAATTAACAATGCCAATCATAGCTGCGAAAGTTATTGAACCAATTATATCATCATAATTGAATTGAATTATAACACTGGTTGCCATAGTAACTATTTGTTTGAATGTAATTCACTTTATATTTTTTAATGAATTAATCAATAAATGAAGATTATTGATT]
[-] EMBL CD074315             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGTACCTATGATGATGAAAGAAGAAGTATGCCATTATGGAAAATTCGAAAATCAAGGATTTGAAATCGTCAGTAAACCATTAAATAACACACGTTTCACATTTGTTGTCGTATTACCTCTTGAAAAATGGTCTCTAACTGGTGCCATGGAACTTTTGAATGGGAATAAAATTCTAAGTGAATACATAAAGAAATTAAAAGAAACTACAGTATCATTAAGATTACCAAAATTTACATTGAAAAATACACTTGATCTTGTGCAAACATTGAAATCTATGGGTATTGTCGATTTGTTTAATCCAGTAGCAGCTAATCTATCAGGAATCACCCATGATCATCAATTATATGTGGATAAATTTATGCAAACTAATATATTAAAATTAAATGAAAGTGGTATTGAAGCAACCACTGTTACATCACCTATATTTGTACCGATTTCAGCTGTATTACCAGATATTGATTTTAATGTAAATCATCCATTTATATGCTTTATATATGATCAACAATTAACAATGCCAATCATAGCTGCGAAAGTTATTGAACCAATTATATCATCATAATTGAATTGAATTATAACACTGGTTGCCATAGTAACTATTTGTTTGAATGTAATTCACTTTATATTTTTTAATGAATTAATCAATAAATGAAGATTATTGATT]
[+] EMBL CD141946             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CATTATGGAAAATTCGAAAATCAAGGATTTGAAATCGTCAGTAAACCATTAAATAACACACGTTTCACATTTGTTGTCGTATTACCTCTTGAAAAATGGTCTCTAACTGGTGCCATGGAACTTTTGAATGGGAATAAAATTCTAAGTGAATACATAAAGAAATTAAAAGAAACTACAGTATCATTAAGATTACCAAAATTTACATTGAAAAATACACTTGATCTTGTGCAAACATTGAAATCTATGGGTATTGTCG                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL SMAA14086            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CATTATGGAAAATTCGAAAATCAAGGATTTGAAATCGTCAGTAAACCATTAAATAACACACGTTTCACATTTGTTGTCGTATTACCTCTTGAAAAATGGTCTCTAACGGGGGCCATGGAACTTTTGAATGGGAATAAAATTCTAAGTGAATACATAAAGAAATTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL AW017103             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTGGTGCCATGGAACTTTTGAATGGGAATAAAATTCTAAGTGAATACATAAAGAAATTAAAAGAAACTACAGTATCATTAAGATTACCAAAATTTACATTGAAAAATACACTTGATCTTGTGCAAACATTGAAATCTATGGGTATTGTCGATTTGTTTAATCCAGTAGCAGCTAATCTATCAGGAATCACCCATGATCATCAATTATATGTGGATAAATTTATGCAAACTAATATATTAAAATTAAATGAAAGTGGTATTGAAGCAACCACTGTTACATCACCTATATTTGTACCGATTTCAGCTGTATTACCAGATATTGATTTTAATGTAAATCATCCATTTATATGCTTTATATATGATCAACAATTAACAATGCCAATCATAGCTGCGAAAGTTATTGAACCAATTATATCATCATAATTGAATTGAATTATATCACTGGTTGCCATAGTAACTATTTGTTTGAATGTAATTCACTTTATATTTTTTAATGAATTAATCAATAAATGAAGATTATTGATT]
[-] EMBL CD065620             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TAAAATTCTAAGTGAATACATAAAGAAATTAAAAGAAACTACAGTATCATTAAGATTACCAAAATTTACATTGAAAAATACACTTGATCTTGTGCAAACATTGAAATCTATGGGTATTGTCGATTTGTTTAATCCAGTAGCAGCTAATCTATCAGGAATCACCCATGATCATCAATTATATGTGGATAAATTTATGCAAACTAATATATTAAAATTAAATGAAAGTGGTATTGAAGCAACCACTGTTACATCACCTATATTTGTACCGATTTCAGCTGTATTACCAGATATTGATTTTAATGTGAATCATCCATTTATATGCTTTATATATGATCAACA  TAACAAT CCTATCATAGCTc                                                                                                                                      ]




>consensus_10567#0
GTATTGTAAGACATGTGTATAAGATTTTCATCAAAAGTTGATGATCCATATGCTAATAAT
CCAAGTCATAAAGCATTTACTCGGGCGTTTCTATCAAAATCTACTGTAGAATTTGGTCAG
GACACTTTTTAACATGTCCACTTGGTATACTATTCACACTTGGTATTCTATTAGGTTCTG
GTGGTGCTCAAGGTAAAACAGGTCATCAAATTGGAAAAGCAATAAGATTGAAATCAACAT
CATCTTCATGGAATCCATTTGGTGCTCAAGAAGAAATGAAATCATTATATAAAGAACTTA
ATGATTCACTTGGTTCAGAGAAAACATTTATAGATGACAAAGAAGAAAAGGTTGTTAGAA
TATCAACAGGTCTATTTGTACAAAGGACATATGAGATTGAAACAAGTTTTAATGAAAGTA
TTAAAAATGATTTTAAAGGAGAACTTATACCGGTGAATTTCTTAAATCGAACTAGTGCTA
CACTTAGTATCAATCGTTGGGTTGATCAACAGTCTAATGGTTTATTGGAAAAATTCTTTA
TGGATGATATACCAGATGATACTGGAATGATATTGGTAAATGTTTTTTATTTTAGAGATT
TTTGGGAAAGTCCATTTGAGCCTCATTACACTAAGATAGAGAATTTTGATATTTCACCAA
ATCGTCAAATCAAAGTACCTATGATGATGAAAGAAGAAGTATTGCATTATGGAAAATTCG
AAAATCAAGGATTTGAAATCGTCAGTAAACCATTAAATAACACACGTTTCACATTTGTTG
TCGTATTACCTCTTGAAAAATGGTCTCTAACTGGTGCCATGGAACTTTTGAATGGGAATA
AAATTCTAAGTGAATACATAAAGAAATTAAAAGAAACTACAGTATCATTAAGATTACCAA
AATTTACATTGAAAAATACACTTGATCTTGTGCAAACATTGAAATCTATGGGTATTGTCG
ATTTGTTTAATCCAGTAGCAGCTAATCTATCAGGAATCACCCATGATCATCAATTATATG
TGGATAAATTTATGCAAACTAATATATTAAAATTAAATGAAAGTGGTATTGAAGCAACCA
CTGTTACATCACCTATATTTGTACCGATTTCAGCTGTATTACCAGATATTGATTTTAATG
TAAATCATCCATTTATATGCTTTATATATGATCAACAATTAACAATGCCAATCATAGCTG
CGAAAGTTATTGAACCAATTATATCATCATAATTGAATTGAATTATAACACTGGTTGCCA
TAGTAACTATTTGTTTGAATGTAATTCACTTTATATTTTTTAATGAATTAATCAATAAAT
GAAGATTATTGATT

consensusID : consensus_10567#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 665
fasta sequence

                              [CTCGNAGGCCAGAATTCGGCACGAGGTGATCCATATGCTAATAATCCAAGTCATAAAGCATTTACTCGGGCGTTTCTATCAAAATCTACTGTAGAATTTGGTCAGGACAACTTTTTAACATGTCCACTTGGTATACTATTCACACTTGGTATTCTATTAGGTTCTGGTGGTGCTCAAGGTAAAACAGGTCATCAAATTGGAAAAGCAATAAGATTGAAATCAACATCATCTTCATGGAATCCATTTGGTGCTCAAGAAGAAATGAAATCATTATATAAAGAACTTAATGATTCACTTGGTTCAGAGAAAACATTTATAGATGACAAAGAAGAAAAGGTTGTTAGAATATCAACAGGTCTATTTGTACAAAGGACATATGAGATTGAAACAAGTTTTAATGAAAGTATTAAAAATGATTTTAAAGGAGAACTTATACCGGTGAATTTCTTAAATCGAACTAGTGCTACACTTAGTATCAATCGTTGGGTTGATCAACAGTCTAATGGTTTATTGGAAAAATTCTTTATGGATGATATACCAGATGATACTGGAATGATATTGGTAAATGTTTTTTATTTTAGAGATTTTTGGGAAAGTCCATTTGAGCCTCATTACACTAAGATAGAGAATTNTGATATTTCACCANATCGTCAAATCAAAGTACC]

[+] EMBL CD080400             [CTCGNAGGCCAGAATTCGGCACGAGGTGATCCATATGCTAATAATCCAAGTCATAAAGCATTTACTCGGGCGTTTCTATCAAAATCTACTGTAGAATTTGGTCAGGACAACTTTTTAACATGTCCACTTGGTATACTATTCACACTTGGTATTCTATTAGGTTCTGGTGGTGCTCAAGGTAAAACAGGTCATCAAATTGGAAAAGCAATAAGATTGAAATCAACATCATCTTCATGGAATCCATTTGGTGCTCAAGAAGAAATGAAATCATTATATAAAGAACTTAATGATTCACTTGGTTCAGAGAAAACATTTATAGATGACAAAGAAGAAAAGGTTGTTAGAATATCAACAGGTCTATTTGTACAAAGGACATATGAGATTGAAACAAGTTTTAATGAAAGTATTAAAAATGATTTTAAAGGAGAACTTATACCGGTGAATTTCTTAAATCGAACTAGTGCTACACTTAGTATCAATCGTTGGGTTGATCAACAGTCTAATGGTTTATTGGAAAAATTCTTTATGGATGATATACCAGATGATACTGGAATGATATTGGTAAATGTTTTTTATTTTAGAGATTTTTGGGAAAGTCCATTTGAGCCTCATTACACTAAGATAGAGAATTNTGATATTTCACCANATCGTCAAATCAAAGTACC]
[-] EMBL CD064426             [                                                                                                                                                                                   TAAAACAGGTCATCAAATTGGAAAAGCAATAAGATTGAAATCAACATCATCTTCATGGAATCCATGTGGTGCTCAAGAAGAAATGAAATCATTATATAAAGAACTTAATGATTCACTTGGTTCAGAGAAAACATTTATAGATGACCCCGGTGATAAGGTTGTTAGAATATCAACAGGTCTATTTGTACAAAGGACATATGAGATTG AACAAGTTTTAATGAAAGTATTAAAAATGATTTTAAAGGAGTACTTATACCGGTGAATTTCTTAAATCGAACTAGTGCTACACTTAGTATCTATCGTTGGGTTGATCTACAGTCTAAT GTGAATTGGAAt                                                                                                                                                    ]
[+] EMBL CD062599             [                                                                                                                                                                                                                                                          CTCAAGAAGAAATGAAATCATTATATAAAGAACTTAATGATTCACTTGGTTCAGAGAAAACATTTATAGATGACAAAGAAGAAAAGGTTGTTAGAATATCAACAGGTCTATTTGTACAAAGGACATATGAGATTGcagggt                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD060020             [                                                                                                                                                                                                                                                                                                                                                                                                                                    acccGAGAACTTATACCGGTGAATTTTTTAAATCGAACTAGTGCTACACTTAGTATCAATCGTTGGGTTGATCAACAGTCTAATGGTTTATTGGAAAAATTCTTTATGGATGATATACCAGATGATACTGGAATGATATTGGTAAATGTTTTTTATTTTAGAGATTTTTGG                                                                          ]




>consensus_10567#1
CTCGNAGGCCAGAATTCGGCACGAGGTGATCCATATGCTAATAATCCAAGTCATAAAGCA
TTTACTCGGGCGTTTCTATCAAAATCTACTGTAGAATTTGGTCAGGACAACTTTTTAACA
TGTCCACTTGGTATACTATTCACACTTGGTATTCTATTAGGTTCTGGTGGTGCTCAAGGT
AAAACAGGTCATCAAATTGGAAAAGCAATAAGATTGAAATCAACATCATCTTCATGGAAT
CCATTTGGTGCTCAAGAAGAAATGAAATCATTATATAAAGAACTTAATGATTCACTTGGT
TCAGAGAAAACATTTATAGATGACAAAGAAGAAAAGGTTGTTAGAATATCAACAGGTCTA
TTTGTACAAAGGACATATGAGATTGAAACAAGTTTTAATGAAAGTATTAAAAATGATTTT
AAAGGAGAACTTATACCGGTGAATTTCTTAAATCGAACTAGTGCTACACTTAGTATCAAT
CGTTGGGTTGATCAACAGTCTAATGGTTTATTGGAAAAATTCTTTATGGATGATATACCA
GATGATACTGGAATGATATTGGTAAATGTTTTTTATTTTAGAGATTTTTGGGAAAGTCCA
TTTGAGCCTCATTACACTAAGATAGAGAATTNTGATATTTCACCANATCGTCAAATCAAA
GTACC

consensusID : consensus_10567#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 291
fasta sequence

                              [AGTCGGCACGAGAGCAACCACTGTTACATCACCTATATTTGTACCGATTTCAGCTGTATTACCAGATATTGATTTTAATGTAAATCATCCATTTATATGCTTTATATATGATCAACAATTAACAATGCCAATCATAGCTGCGAAAGTTATTGAACCAATTATATCATCATAATTGAATTGAATTATATCACTGGTTGCCATAGTAACTATTTGTTTGAATGTAATTCACTTTATANTTTTTCATGAATTAATCAATANNTGAAGATTATTGATTGTTANGATCAACNCGGT]

[+] EMBL SM210                [AGTCGGCACGAGAGCAACCACTGTTACATCACCTATATTTGTACCGATTTCAGCTGTATTACCAGATATTGATTTTAATGTAAATCATCCATTTATATGCTTTATATATGATCAACAATTAACAATGCCAATCATAGCTGCGAAAGTTATTGAACCAATTATATCATCATAATTGAATTGAATTATATCACTGGTTGCCATAGTAACTATTTGTTTGAATGTAATTCACTTTATANTTTTTCATGAATTAATCAATANNTGAAGATTATTGATTGTTANGATCAACNCGGT]




>consensus_10567#2
AGTCGGCACGAGAGCAACCACTGTTACATCACCTATATTTGTACCGATTTCAGCTGTATT
ACCAGATATTGATTTTAATGTAAATCATCCATTTATATGCTTTATATATGATCAACAATT
AACAATGCCAATCATAGCTGCGAAAGTTATTGAACCAATTATATCATCATAATTGAATTG
AATTATATCACTGGTTGCCATAGTAACTATTTGTTTGAATGTAATTCACTTTATANTTTT
TCATGAATTAATCAATANNTGAAGATTATTGATTGTTANGATCAACNCGGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10567#0      GTATTGTAAGACATGTGTATAAGATTTTCATCAAAAGTTGATGATCCATATGCTAATAAT 60
consensus_10567#1      -----------CTCGNAGGCCAGAATT-CGGCACGAG---GTGATCCATATGCTAATAAT 45
consensus_10567#2      ------------------------------------------------------------
                                                                                   

consensus_10567#0      CCAAGTCATAAAGCATTTACTCGGGCGTTTCTATCAAAATCTACTGTAGAATTTGGTCAG 120
consensus_10567#1      CCAAGTCATAAAGCATTTACTCGGGCGTTTCTATCAAAATCTACTGTAGAATTTGGTCAG 105
consensus_10567#2      ------------------------------------------------------------
                                                                                   

consensus_10567#0      GACA-CTTTTTAACATGTCCACTTGGTATACTATTCACACTTGGTATTCTATTAGGTTCT 179
consensus_10567#1      GACAACTTTTTAACATGTCCACTTGGTATACTATTCACACTTGGTATTCTATTAGGTTCT 165
consensus_10567#2      ------------------------------------------------------------
                                                                                   

consensus_10567#0      GGTGGTGCTCAAGGTAAAACAGGTCATCAAATTGGAAAAGCAATAAGATTGAAATCAACA 239
consensus_10567#1      GGTGGTGCTCAAGGTAAAACAGGTCATCAAATTGGAAAAGCAATAAGATTGAAATCAACA 225
consensus_10567#2      ------------------------------------------------------------
                                                                                   

consensus_10567#0      TCATCTTCATGGAATCCATTTGGTGCTCAAGAAGAAATGAAATCATTATATAAAGAACTT 299
consensus_10567#1      TCATCTTCATGGAATCCATTTGGTGCTCAAGAAGAAATGAAATCATTATATAAAGAACTT 285
consensus_10567#2      ------------------------------------------------------------
                                                                                   

consensus_10567#0      AATGATTCACTTGGTTCAGAGAAAACATTTATAGATGACAAAGAAGAAAAGGTTGTTAGA 359
consensus_10567#1      AATGATTCACTTGGTTCAGAGAAAACATTTATAGATGACAAAGAAGAAAAGGTTGTTAGA 345
consensus_10567#2      -----------------------------------------------------AGTCGGC 7
                                                                             **  * 

consensus_10567#0      ATATCAACAGGTCTATTTGTACAAAGGACATATGAGATTGAAACAAGTTTTAATGAAAGT 419
consensus_10567#1      ATATCAACAGGTCTATTTGTACAAAGGACATATGAGATTGAAACAAGTTTTAATGAAAGT 405
consensus_10567#2      ACGAGAGCAA--CCACTGTTACATCACCTATAT----TTGTACCGA-TTTCAGCTGTATT 60
                       *    * **   * * *  ****      ****    *** * * * *** *     * *

consensus_10567#0      ATTAAAAAT-GATTTTAAAGGAGAACTTATACCGGTGAATTTCTTAAATCGAACTAGTGC 478
consensus_10567#1      ATTAAAAAT-GATTTTAAAGGAGAACTTATACCGGTGAATTTCTTAAATCGAACTAGTGC 464
consensus_10567#2      ACCAGATATTGATTTTAATGTAAATCATCCATTTATATGCTTTATATAT-GATCAACAAT 119
                       *  * * ** ******** * * * * *  *    *    **  ** ** ** * *    

consensus_10567#0      TACACTTAGTATCAATCGTTGGGTTGATCAACAGTCTAATGGTTTATTGGAAAAATTCTT 538
consensus_10567#1      TACACTTAGTATCAATCGTTGGGTTGATCAACAGTCTAATGGTTTATTGGAAAAATTCTT 524
consensus_10567#2      TAACAATGCCAATCATAGCTGCGAAAGTTATTGAACCAAT--TATATCATCATAATTGAA 177
                       **    *   *   ** * ** *    * *     * ***  * ***    * ****   

consensus_10567#0      TATGGATGATAT-ACCAGATGATACTGGAATGATATTGGTAAATGTTTTTTATTTTAGAG 597
consensus_10567#1      TATGGATGATAT-ACCAGATGATACTGGAATGATATTGGTAAATGTTTTTTATTTTAGAG 583
consensus_10567#2      T-TGAATTATATCACTGGTTGCCATAGTAACTATTTGTTTGAATGTAATTCACTTTATAN 236
                       * ** ** **** **  * **  *  * **  ** *   * *****  ** * **** * 

consensus_10567#0      ATTTTTGGGAAAGTCCATTTGAGCCTCATTACACTAAGATAGAGAATTTTGATATTTCAC 657
consensus_10567#1      ATTTTTGGGAAAGTCCATTTGAGCCTCATTACACTAAGATAGAGAATTNTGATATTTCAC 643
consensus_10567#2      TTTTTCATGAA-------TTAA---TCAATANNTGAAGATTATTGATTGTTANGATCAAC 286
                        ****   ***       ** *   *** **    *****     *** * *   *  **

consensus_10567#0      CAAATCGTCAAATCAAAGTACCTATGATGATGAAAGAAGAAGTATTGCATTATGGAAAAT 717
consensus_10567#1      CANATCGTCAAATCAAAGTACC-------------------------------------- 665
consensus_10567#2      NCGGT------------------------------------------------------- 291
                           *                                                       

consensus_10567#0      TCGAAAATCAAGGATTTGAAATCGTCAGTAAACCATTAAATAACACACGTTTCACATTTG 777
consensus_10567#1      ------------------------------------------------------------
consensus_10567#2      ------------------------------------------------------------
                                                                                   

consensus_10567#0      TTGTCGTATTACCTCTTGAAAAATGGTCTCTAACTGGTGCCATGGAACTTTTGAATGGGA 837
consensus_10567#1      ------------------------------------------------------------
consensus_10567#2      ------------------------------------------------------------
                                                                                   

consensus_10567#0      ATAAAATTCTAAGTGAATACATAAAGAAATTAAAAGAAACTACAGTATCATTAAGATTAC 897
consensus_10567#1      ------------------------------------------------------------
consensus_10567#2      ------------------------------------------------------------
                                                                                   

consensus_10567#0      CAAAATTTACATTGAAAAATACACTTGATCTTGTGCAAACATTGAAATCTATGGGTATTG 957
consensus_10567#1      ------------------------------------------------------------
consensus_10567#2      ------------------------------------------------------------
                                                                                   

consensus_10567#0      TCGATTTGTTTAATCCAGTAGCAGCTAATCTATCAGGAATCACCCATGATCATCAATTAT 1017
consensus_10567#1      ------------------------------------------------------------
consensus_10567#2      ------------------------------------------------------------
                                                                                   

consensus_10567#0      ATGTGGATAAATTTATGCAAACTAATATATTAAAATTAAATGAAAGTGGTATTGAAGCAA 1077
consensus_10567#1      ------------------------------------------------------------
consensus_10567#2      ------------------------------------------------------------
                                                                                   

consensus_10567#0      CCACTGTTACATCACCTATATTTGTACCGATTTCAGCTGTATTACCAGATATTGATTTTA 1137
consensus_10567#1      ------------------------------------------------------------
consensus_10567#2      ------------------------------------------------------------
                                                                                   

consensus_10567#0      ATGTAAATCATCCATTTATATGCTTTATATATGATCAACAATTAACAATGCCAATCATAG 1197
consensus_10567#1      ------------------------------------------------------------
consensus_10567#2      ------------------------------------------------------------
                                                                                   

consensus_10567#0      CTGCGAAAGTTATTGAACCAATTATATCATCATAATTGAATTGAATTATAACACTGGTTG 1257
consensus_10567#1      ------------------------------------------------------------
consensus_10567#2      ------------------------------------------------------------
                                                                                   

consensus_10567#0      CCATAGTAACTATTTGTTTGAATGTAATTCACTTTATATTTTTTAATGAATTAATCAATA 1317
consensus_10567#1      ------------------------------------------------------------
consensus_10567#2      ------------------------------------------------------------
                                                                                   

consensus_10567#0      AATGAAGATTATTGATT 1334
consensus_10567#1      -----------------
consensus_10567#2      -----------------