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Schistosoma mansoni
cluster # 10569 cluster # 10569       Sequences # 18       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10569#0 length = 1137 sequences # 6  
consensus_10569#1 length = 872 sequences # 4  
consensus_10569#2 length = 681 sequences # 5  
consensus_10569#3 length = 443 sequences # 1  
consensus_10569#4 length = 298 sequences # 1  
consensus_10569#5 length = 204 sequences # 1  

consensusID : consensus_10569#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1137
fasta sequence
                              [ATGAATACAAGAATATTCTGGTTATTACACCACACTTCATACAAAGTATATCATCATTCCACAGCATTAATTCACCATTTTTATTAAACGTTGCTAATATATTCCCACCATTGGTGAGTAGGCAAGTGAACAGAGTGACGTTGATGCAGATAGTGACCTCACAATAGATAAGGAAGACAAATTGTAGAAATGTATTGTACCATCCCAACATCCTATAGCCAAATCATCATGTATTAAGTCTTCTTGTTTATTGTTTAGAACAGATGGTAATCGGAATGCAATTGAAACAATAGGATGACTGGATACATTTATTGACTTAAATGGGTGAAGCTTTACAGAACAGACACTTGTCGATAGCTCACTGGATTTAACATC-AATTTGTGAAACATCCCATAAGTACACCATACAGTCTAAGTCACCGGTAGCAACCAGTTGACGTCTTGGATGCCATGCAGAAGTAGTTACACATCGACGATGATATCCACATAACGATGCCAATTGTGAAATCACTGTTTTATCATGCACATTATATTCAACATTGTGAGTCACAGTAGACGCATCCCAGATAAAAATATCACCATCCTCTGAAGCACTCATCAACCAAAGTTCTGAAATGAACTTTTTGGGAGATTTTACGTCTTCAGATTTACTGGGAAATTCCTCAAGGAAACATAAACTTTGAACGCTTGAATGGTGTCCAGTTAATGACCACAGTTCACGTAGAGTGGACAATTCTACGAAAGCGATCGTACCACACCTAGTTCCATACACCAATACTTTGGCAGCTGAATTCATTTCCACAGATGTTGGCACATCCATGGAACCATTTGAAGTTACAATCGGTTTATATATCATATTCCTCTGCATAGGTTTAATCAGAGTGCATTTTGGCAAATTTACACGGAAGAGTATTTGACTATTGTTCATGTCTAATTGACTTTGTACACCGAAATCATTAAGATACAACAATGAGAGGCCTAACGCATGGATCCATTCACTGGAATCTTGGTTGATAGCTAATTCGCAAAACGAATTTGGATATTTTACTAAAAACTCATAGTTTACACAAATAAACTTCTTCATCGCATCAATTTTGTCACCGAAAGGACATGATTCTAGTTTCCTTTTCCACTTTTC]

[+] EMBL CD166816             [ATGAATACAAGAATATTCTGGTTATTACACCACACTTCATACAAAGTATATCATCATTCCACAGCATTAATTCACCATTTTTATTAAACGTTGCTAATATATTCCCACCATTGGTGAGTAGGCAAGTGAACAGAGTGACGTTGATGCAGATAGTGACCTCACAATAGATAAGGAAGACAAATTGTAGAAATGTATTGTACCATCCCAACATCCTATAGCCAAATCATCATGTATTAAGTCTTCTTGTTTATTGTTTAGAACAGATGGTAATCGGAATGCAATTGAAACAATAGGATGACTGGATACATTTATTGACTTAAATGGGTGAAGCTTTACAGAACAGACACTTGTTGATAGCTCACTGGATTTAACATC AATTTGTGAAACATCCCATAAGTACACCATACAGTCTAAGTCACCGGTAGCAACCAGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD114604             [                                                                                                                                                                                                                                                                                      CAATTGAAACAATAGGATGACTGGATACATTTATTGACTTAAATGGGTGAAGCTTTACAGAACAGACACTTGTCGATAGCTCACTGGATTTAACATC AATTTGTGAAACATCCCATAAGTACACCATACAGTCTAAGTCACCGGTAGCAACCAGTTGACGTCTTGGATGCCATGCAGAAGTAGTTACACATCGACGATGATATCCACATAACGATGCCAATTGTGAAATCACTGTTTTATCATGCACATTATATTCAACATTGTGAGTCACAGTAGACGCATCCCAGATAAAAATATCACCATCCTCTGAAGCACTCATCAACCAAAGTTCTGAATTGAACTTTTTGGGAGATTTTACGTCTTCAGATTTACTGGGAAATTCCTCAAGGAAACATAAACTTTGAACGCTTGAATGGTGTCCAGTTAATGACCACAGTTCACGTAGAGTGGACAATTCTACG                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD124927             [                                                                                                                                                                                                                                                                                                                         GACTTAAATGGGTGAAGCTTTACAGAACAGACACTTGTCGATAGCTCACTGGATTTAACATC AATTTGTGAAACATCCCATAAGTACACCATACAGTCTAAGTCACCGGTAGCAACCAGTTGACGTCTTGGATGCCATGCAGAAGAAGTTACACATCGACGATGATATCCACATAACGATGCCAATTGTGAAATCACTGTTTTATCATGCACATTATATTCAACATTGTGAGTCACAGTAGACGCATCCCAGATAAAAATATCACCATCCTCTGAAGCACTCATCAACCAAAGTTCTGAAATGAACTTTTTGGGAGATTTTACGTCTTCAGATTTACTGGGAAATTCCTCAAGGAAACATAAACTTTGAACGCTTGAATGGTGTCCAGTTAATGACCACAGTTCGCGTAGAGTGGACAATTCTACGAAAGCGATCGTACCACACCTAGTTCCATACACCAATACTTTGGCAGCTGAATTCATTTCCACAGATGTTGGCACATCCATGGAACCATTTGAAGTTACAATCGGTTTATATATCATATTCCTCTGCATAGGTTTAATCAGAGTGCATTTTGGCAAATTTACACGGAAGAGTATTTGACTATTGTTCATGTCTAATT                                                                                                                                                                                                          ]
[+] EMBL CD186844             [                                                                                                                                                                                                                                                                                                                                                                        gCTGGATTTAACATCGAATTTGTGAAACATCCCATAAGTACACCATACAGTCTAAGTCACCGGTAGCAACCAGTTGACGTCTTGGATGCCATGCAGAAGTAGTTACACATCGACGATGATATCCACATAACGATGCCAATTGTGAAATCACTGTTTTATCATGCACATTATATTCAACATTGTGAGTCACAGTAGACGCATCCCAGATAAAAATATCACCATCCTCTGAAGCACTCATCAACCAAAGTTCTGAAATGAACTTTTTGGGAGATTTTACGTCTTCAGATTTACTGGGAAATTCCTCGAGGAAACATAAACTTTGAACGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD186871             [                                                                                                                                                                                                                                                                                                                                                                             ATTTAACATC AATTTGTGAAACATCCCATAAGTACACCATACAGTCTAAGTCACCGGTAGCAACCAGTTGACGTCTTGGATGCCATGCAGAAGTAGTTACACATCGACGATGATATCCACATAACGATGCCAATTGTGAAATCACTGTTTTATCATGCACATTATATTCAACATTGTGAGTCACAGTAGACGCATCCCAGATAAAAATATCACCATCCTCTGAAGCACTCATCAACCAAAGTTCTGAAATGAACTTTTTGGGAGATTTTACGTCTTCAGATTTACTGGGAAATTCCTCAAGGAAACATAAACTTTGAACGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD158114             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCAGCTGAATTCATTTCCACAGATGTTGGCACATCCATGGAACCATTTGAAGTTACAATCGGTTTATATATCATATTCCTCTGCATAGGTTTAATCAGAGTGCATTTTGGCAAATTTACACGGAAGAGTATTTGACTATTGTTCATGTCTAATTGACTTTGTACACCGAAATCATTAAGATACAACAATGAGAGGCCTAACGCATGGATCCATTCACTGGAATCTTGGTTGATAGCTAATTCGCAAAACGAATTTGGATATTTTACTAAAAACTCATAGTTTACACAAATAAACTTCTTCATCGCATCAATTTTGTCACCGAAAGGACATGATTCTAGTTTCCTTTTCCACTTTTC]


>consensus_10569#0 ATGAATACAAGAATATTCTGGTTATTACACCACACTTCATACAAAGTATATCATCATTCC ACAGCATTAATTCACCATTTTTATTAAACGTTGCTAATATATTCCCACCATTGGTGAGTA GGCAAGTGAACAGAGTGACGTTGATGCAGATAGTGACCTCACAATAGATAAGGAAGACAA ATTGTAGAAATGTATTGTACCATCCCAACATCCTATAGCCAAATCATCATGTATTAAGTC TTCTTGTTTATTGTTTAGAACAGATGGTAATCGGAATGCAATTGAAACAATAGGATGACT GGATACATTTATTGACTTAAATGGGTGAAGCTTTACAGAACAGACACTTGTCGATAGCTC ACTGGATTTAACATCAATTTGTGAAACATCCCATAAGTACACCATACAGTCTAAGTCACC GGTAGCAACCAGTTGACGTCTTGGATGCCATGCAGAAGTAGTTACACATCGACGATGATA TCCACATAACGATGCCAATTGTGAAATCACTGTTTTATCATGCACATTATATTCAACATT GTGAGTCACAGTAGACGCATCCCAGATAAAAATATCACCATCCTCTGAAGCACTCATCAA CCAAAGTTCTGAAATGAACTTTTTGGGAGATTTTACGTCTTCAGATTTACTGGGAAATTC CTCAAGGAAACATAAACTTTGAACGCTTGAATGGTGTCCAGTTAATGACCACAGTTCACG TAGAGTGGACAATTCTACGAAAGCGATCGTACCACACCTAGTTCCATACACCAATACTTT GGCAGCTGAATTCATTTCCACAGATGTTGGCACATCCATGGAACCATTTGAAGTTACAAT CGGTTTATATATCATATTCCTCTGCATAGGTTTAATCAGAGTGCATTTTGGCAAATTTAC ACGGAAGAGTATTTGACTATTGTTCATGTCTAATTGACTTTGTACACCGAAATCATTAAG ATACAACAATGAGAGGCCTAACGCATGGATCCATTCACTGGAATCTTGGTTGATAGCTAA TTCGCAAAACGAATTTGGATATTTTACTAAAAACTCATAGTTTACACAAATAAACTTCTT CATCGCATCAATTTTGTCACCGAAAGGACATGATTCTAGTTTCCTTTTCCACTTTTC



consensusID : consensus_10569#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 872
fasta sequence
                              [TTTTTATTTTTTTTTTTTTTATTGGGATAGACTGAAGTCGACACAATTTATTCTGTCAGAAAAAGA-ATCAATATGATAAAATGTGAAAATAGTAAGTTTTGTCAAAAAAGACTGTATGAATCCCGTACGGGGAACCACTAGCGGTTCATCCTATTCGGGATTCGTTACAGTGATATTTGTAACGAAATCCGACTACATAAATAAAATTCACAAAGGGGATAATTGAAGAAAGGTGAGAAAATATTGATAGAAACCATATAT-T-TATGTCGCAGGAGCACGTTTTTAACAAATGCACGCAATAAGGATCCTCACATTAATATTGGTGCAATAAATCAGGTTTTAGTTGAAAGACTTTTACTTAAATATTGGTAGGATGCTTCCTATTTCGAGCACTAAAGAGGAATGAATAAGAAGTGTGAAATAGAATAAATCCATATCGTATTTTAATGGTATTCAGAACTGCCCAGAATTCCCGAGGAAATCACTTAGAAGATCGACGTTTGAAGTAGTCGATGGGACATTCGGTGTGCACACAGGATTTGTATAGTTTGCTTGTGATGAGTCACTATTAAATAAGTTACCAGACACAGGAGTANGTATCTTCCTACAACGCGATATACACACGAGACCNGAGAAACAGCCAGGTGGCAGGAGGAGNGGGGCANGTAGACCACCCGNATAATCGCAGAACTAAGGGNNAGCGTNGTAACACTTTGATATTGGGATATTGGATCATACCCCTGTACGACAGGGTATTGCAGATTTAATTTTATTTTTTCCCCTTCTTTGAAACTCATATATTAGCGTGGTTGGTTGGCTGCGTTTTCTTCAATTTCTTTAGCTTCTTTTTCCTGTTTAACATCACGCAAAAC]

[+] EMBL AI394959             [TTTTTATTTTTTTTTTTTTTATTGGGATAGACTGAAGTCGACACAATTTATTCTGTCAGAAAAAGACATCAATATGATAAAATGTGAAAATAGTAAGTTTTGTCAAAAAAGACTGTATGAATCCCGTACGGGGAACCACTAGCGGTTCATCCTATTCGGGATTCGTTACAGTGATATTTGTAACGAAATCCGACTACATAAATAAAATTCACAAAGGGGATAATTGAAGAAAGGTGAGAAAATATTGATAGAAACCATATATATATATGTCGCAGGAGCACGTTTTTAACAAATGCACGCAATAAGGATCCTCACATTAATATTGGTGCAATAAATCAGGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD077102             [                                ccAAGTCGATACAATTTATTCTGTCAAAAAAAGA ATCAATATGATAAAATGTGAAAATAGTAAGTTTTGTCAAAAAAGACTGTATGAATCCCGTACGGGGAACCACTAGCGGGTCATCCTATTCGGGATTCGTTACAGTGATATTTGGAACGAAATCCGACTACATAAATAAAATTCACAAAGGGGATAATTGAAGAAAGGTGAGAAAATATTGATAGAAACCATATAT T TATGTCGCAGGAGCACGTTTTTAACAAATGCAAGCAATAATGATCCTCACATTAATATTGTAGCAATAAATCAGGTTTTAGTTGAAAGACTTTTACTTAAATATTGGTAGGATGCTTCCTATTTCGAGCACTAAAGAGGAATGAATAAGAAGTGTGAAATAGAATAAATCCATATCGTATTTTGATGGGATTCAGAACTGCCCAc                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL AA804157             [                                                                                                                                                                                                                                                                                                                                                                          TAAATATTGTTAGGATGCTTCCTATTTCGAGCACTAAAGAGGAATGAATAAGAAGTGTGAAATAGAATAAATCCATATCGTATTTTAATGGTATTCAGAACTGCCCAGAATTCCCGAGGAAATCACTTAGAAGATCGACGTTTGAAGTAGTCGATGGGACATTCGG                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD083341             [                                                                                                                                                                                                                                                                                                                                                                                          GCTTCCTATTTCGAGCACTAAAGAGGAATGAATAAGAAGTGTGAAATAGAATAAATCCATATCGTATTTTAATGGTATTCAGAACTGCCCAGAATTCCCGAGGAAATCACTTAGAAGATCGACGTTTGAAGTAGTCGATGGGACATTCGGTGTGCACACAGGATTTGTATAGTTTGCTTGTGATGAGTCACTATTAAATAAGTTACCAGACACAGGAGTANGTATCTTCCTACAACGCGATATACACACGAGACCNGAGAAACAGCCAGGTGGCAGGAGGAGNGGGGCANGTAGACCACCCGNATAATCGCAGAACTAAGGGNNAGCGTNGTAACACTTTGATATTGGGATATTGGATCATACCCCTGTACGACAGGGTATTGCAGATTTAATTTTATTTTTTCCCCTTCTTTGAAACTCATATATTAGCGTGGTTGGTTGGCTGCGTTTTCTTCAATTTCTTTAGCTTCTTTTTCCTGTTTAACATCACGCAAAAC]


>consensus_10569#1 TTTTTATTTTTTTTTTTTTTATTGGGATAGACTGAAGTCGACACAATTTATTCTGTCAGA AAAAGAATCAATATGATAAAATGTGAAAATAGTAAGTTTTGTCAAAAAAGACTGTATGAA TCCCGTACGGGGAACCACTAGCGGTTCATCCTATTCGGGATTCGTTACAGTGATATTTGT AACGAAATCCGACTACATAAATAAAATTCACAAAGGGGATAATTGAAGAAAGGTGAGAAA ATATTGATAGAAACCATATATTTATGTCGCAGGAGCACGTTTTTAACAAATGCACGCAAT AAGGATCCTCACATTAATATTGGTGCAATAAATCAGGTTTTAGTTGAAAGACTTTTACTT AAATATTGGTAGGATGCTTCCTATTTCGAGCACTAAAGAGGAATGAATAAGAAGTGTGAA ATAGAATAAATCCATATCGTATTTTAATGGTATTCAGAACTGCCCAGAATTCCCGAGGAA ATCACTTAGAAGATCGACGTTTGAAGTAGTCGATGGGACATTCGGTGTGCACACAGGATT TGTATAGTTTGCTTGTGATGAGTCACTATTAAATAAGTTACCAGACACAGGAGTANGTAT CTTCCTACAACGCGATATACACACGAGACCNGAGAAACAGCCAGGTGGCAGGAGGAGNGG GGCANGTAGACCACCCGNATAATCGCAGAACTAAGGGNNAGCGTNGTAACACTTTGATAT TGGGATATTGGATCATACCCCTGTACGACAGGGTATTGCAGATTTAATTTTATTTTTTCC CCTTCTTTGAAACTCATATATTAGCGTGGTTGGTTGGCTGCGTTTTCTTCAATTTCTTTA GCTTCTTTTTCCTGTTTAACATCACGCAAAAC



consensusID : consensus_10569#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 681
fasta sequence
                              [GCCGGTGTTGTAAAGGAAAAGCTAGTACTTCATATTGTAGGACAGTGCTCAGTGGAGTACCCTAGGGCACAGTTTTCACCTCTTCTTATCATTAATCTTGTTATATGCTGACGAAATTCAGATATTGAAGGCTACAGAAAGTAAATAAAGTCGTTTAGAACATCAGAAAGTTTGTGTCACTGAGAAGTAGTTTGTTGACTTATTGTTTACTTTATATCGTTCTGTTGAATGTTATGGATTATGAGAACGTGCTACTCGTGAAAAATGAGGTGTTCGTCTATCAGATTCTTTCAAGACAGTCTAATCGGGGTTACAGGGCTAATAACTGGAACCTAGAAACTCCCATGTGGACTGGAAGACTTCGTGTTATTGCCAAAGGTAAAGATCTCGTAATACGATTGGAAGATAAGAATTCTGGACAGTTATATGCTGAATGCCCAGTAGACTCATTCCCTGGGATATCCGTTGAACCAGTTATTGACTCAAGTCGATTTTTTGTTATTCGATTAATGAATGATAGTGGGGAAACTAAATTTG-TAGGGATTGGTTTCGCAGAACGTTCGGATTCGTTTGACCTCAATGTAGCAATTCAAGACCATTTCAAATGGTTAAAACAGGAAAAAGAAGCTAAAGAAATTGAAGAAAACGCAGCCAACCAACCAGCTAAATATATGAGTTTCA]

[+] EMBL CD096341             [GCCGGTGTTGTAAAGGAAAAGCTAGTACTTCATATTGTAGGACAGTGCTCAGTGGAGTACCCTAGGGCACAGTTTTCACCTCTTCTTATCATTAATCTTGTTATATGCTGACGAAATTCAGATATTGAAGGCTACAGAAAGTAAATAAAGTCGTTTAGAACATCAGAAAGTTTGTGTCACTGAGAAGTAGTTTGTTGACTTATTGTTTACTTTATATCGTTCTGTTGAATGTTATGGATTATGAGAACGTGCTACTCGTGAAAAATGAGGTGTTCGTCTATCAGATTCTTTCAAGACAGTCTAATCGGGGTTACAGGGCTAATAACTGGAACCTAGAAACTCCCATGTGGACTGGAAGACTTCGTGTTATTGCCAAAGGTAAAGATCTCGTAATACGATTGGAAGATAAGAATTCTGGACAGTTATATGCTGAATGCCCAGTAGACTCATTCCCTGGGATATCCGTTGAACCAGTTATTGACTCAAGTCGATTTTTTGTTATTCGATTAATGAATGATAGTGNGGAAACTAAATTTG TAGGGATTGGTTTCGCAGAACGTTC                                                                                                                       ]
[+] EMBL CD096393             [                 AAAGCTAGTACTTCATATTGTAGGACAGTGCTCAGTGGAGTACCCTAGGGCGCAGTTTTCACCTCTTCTTATCATTAATCTTGTTATATGCTGACGAAATTCAGATATTGAAGGCTACAGAAAGTAAATAAAGTCGTTTAGAACATCAGAAAGTTTGTGTCACTGAGAAGTAGTTTGTTGACTTATTGTTTACTTTATATCGTTCTGTTGAATGTTATGGATTATGAGAACGTGCTACTCGTGAAAAATGAGGTGTTCGTCTATCAGATTCTTTCAAGACAGTCTAATCGGGGTTACAGGGCTAATAACTGGAACCTAGAAACTCCCATGTGGACTGGAAGACTTCGTGTTATTGCCAAAGGTAAAGGTCTCGTAATACGATTGGAAGATAAGAATTCTGGACAGTTATATGCTGAATGCCCAGTAGACTCATTCCCTGGGATATCCGTTGAACCAGTTATTGACTCAAGTCGATTTTTTGTTATTCGATTAATGAATGATAGTGGGGAAACTAAATTTG TAGGGATTGGTTTCGCAGAACGTTCGGATTCGTTTGACCTCAATGTAGNCATTCAAGACCATTTCANAT                                                                           ]
[+] EMBL AI975790             [                                                                                                                                                                                 CACTGAGAAGTAGTTTGTTGACTTATTGTTTACTTTATATCGTTCTGTTGAATGTTATGGATTATGAGAACGTGCTACTCGTGAAAAATGAGGTGTTCGTCTATCAGATTCTTTCAAGACAGTCTAATCGGGGTTACAGGGCTAATAACTGGAACCTAGAAACTCCCATGTGGACTGGAAGACTTCGTGTTATTGCCAAAGGTAAAGATCTCGTAATACGATTGGAAGATAAGAATTCTGGACAGTTATATGCTGAATGCCCAGTAGACTCATTCCCTGGGATATACGTTGAACCAGTTATTGACTCAAGTCGATTTTTTGTTATTCGATTAATGAATGATAGTGGGGAAACTAAATTTG TAGGGATTGGTTTCGCAGAACGTTCGGATTCGTTTGACCTCAATGTAGCAATTCAAGACCATTTCAAATGGTTAAAACAGGAAAAAGAAGCTAAAGAAATTGAAGAAAACGCAGCCAACCAACCAGCTAAATATATGAGTTTC ]
[-] EMBL CD157181             [                                                                                                                                                                                            AGTTTGTTGACTTATTGTTTACTTTATATCGTTCTGTTGAATGTTATGGATTATGAGAACGTGCTACTCGTGAAAAATGAGGTGTTCGTCTATCAGATTCTTTCAAGACAGTCTAATCGGGGTTACAGGGCTAATAACTGGAACCTAGAAACTCCCATGTGGACTGGAAGACTTCGTGTTATTGCCAAAGGTAAAGATCTCGTAATACGATTGGAAGATAAGAATTCTGGACAGTTATATGCTGAATGCCCAGTAGACTCATTCCCTGGGATATCCGTTGAACCAGTTATTGACTCAAGTCGATTTTTTGTTATTCGATTAATGAATGATAGTGGGGAAACTAAATTTG TAGGGATTGGTTTCGCA                                                                                                                               ]
[-] EMBL CD185249             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTGTTAGGGATTGGTTTCGCAGAACGTTGGGATTCGTTTGACCTCAATGTAGCAATTCAAGACCATTTCAAATGGTTAAAACAGGAAAAAGAAGGTAAAGAAATTGAAGAAAACGCAGCCAACCAACCAGCTAAATATATGAGTTTCA]


>consensus_10569#2 GCCGGTGTTGTAAAGGAAAAGCTAGTACTTCATATTGTAGGACAGTGCTCAGTGGAGTAC CCTAGGGCACAGTTTTCACCTCTTCTTATCATTAATCTTGTTATATGCTGACGAAATTCA GATATTGAAGGCTACAGAAAGTAAATAAAGTCGTTTAGAACATCAGAAAGTTTGTGTCAC TGAGAAGTAGTTTGTTGACTTATTGTTTACTTTATATCGTTCTGTTGAATGTTATGGATT ATGAGAACGTGCTACTCGTGAAAAATGAGGTGTTCGTCTATCAGATTCTTTCAAGACAGT CTAATCGGGGTTACAGGGCTAATAACTGGAACCTAGAAACTCCCATGTGGACTGGAAGAC TTCGTGTTATTGCCAAAGGTAAAGATCTCGTAATACGATTGGAAGATAAGAATTCTGGAC AGTTATATGCTGAATGCCCAGTAGACTCATTCCCTGGGATATCCGTTGAACCAGTTATTG ACTCAAGTCGATTTTTTGTTATTCGATTAATGAATGATAGTGGGGAAACTAAATTTGTAG GGATTGGTTTCGCAGAACGTTCGGATTCGTTTGACCTCAATGTAGCAATTCAAGACCATT TCAAATGGTTAAAACAGGAAAAAGAAGCTAAAGAAATTGAAGAAAACGCAGCCAACCAAC CAGCTAAATATATGAGTTTCA



consensusID : consensus_10569#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 443
fasta sequence
                              [ATTGAAACAATAGGATGACTGGATACATTTATTGACTTAAATGGGTGAAGCTTTACAGAACAGACACTTGTCGATAGCTCACTGGATTTAACATCAATTTGTGAAACATCCCATAAGTACACCATACAGTCTAAGTCACCGGTAGCAACCAGTTGACGTCTTGGATGCCATGCAGAAGTAGTTACACATCGACGATGATATCCACATAACGATGCCAATTGTGAAATCACTGTTTTATCATGCACATTATATTCAACATTGAGGTCAAACGAATCCGAACGTTCTGCGAAACCAATCCCTACAAATTTAGTTTCCCCACTATCATTCATTAATCGAATAACAATGAAACTTTTTTTTTGACTATTGAGTTCGATACTGATTTAACTTTTTGGTTGATATAACTGTTGAATTATAGATTGCATTCAACAAGACCTTCTATAATG]

[-] EMBL CD168097             [ATTGAAACAATAGGATGACTGGATACATTTATTGACTTAAATGGGTGAAGCTTTACAGAACAGACACTTGTCGATAGCTCACTGGATTTAACATCAATTTGTGAAACATCCCATAAGTACACCATACAGTCTAAGTCACCGGTAGCAACCAGTTGACGTCTTGGATGCCATGCAGAAGTAGTTACACATCGACGATGATATCCACATAACGATGCCAATTGTGAAATCACTGTTTTATCATGCACATTATATTCAACATTGAGGTCAAACGAATCCGAACGTTCTGCGAAACCAATCCCTACAAATTTAGTTTCCCCACTATCATTCATTAATCGAATAACAATGAAACTTTTTTTTTGACTATTGAGTTCGATACTGATTTAACTTTTTGGTTGATATAACTGTTGAATTATAGATTGCATTCAACAAGACCTTCTATAATG]


>consensus_10569#3 ATTGAAACAATAGGATGACTGGATACATTTATTGACTTAAATGGGTGAAGCTTTACAGAA CAGACACTTGTCGATAGCTCACTGGATTTAACATCAATTTGTGAAACATCCCATAAGTAC ACCATACAGTCTAAGTCACCGGTAGCAACCAGTTGACGTCTTGGATGCCATGCAGAAGTA GTTACACATCGACGATGATATCCACATAACGATGCCAATTGTGAAATCACTGTTTTATCA TGCACATTATATTCAACATTGAGGTCAAACGAATCCGAACGTTCTGCGAAACCAATCCCT ACAAATTTAGTTTCCCCACTATCATTCATTAATCGAATAACAATGAAACTTTTTTTTTGA CTATTGAGTTCGATACTGATTTAACTTTTTGGTTGATATAACTGTTGAATTATAGATTGC ATTCAACAAGACCTTCTATAATG



consensusID : consensus_10569#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 298
fasta sequence
                              [GTTGTTCGCAACTACTTCAGTTTGTCGCGTTATCCGTTTAGTTTTGTGTCACTGAGAAGTAGTTTGTTGACTTATTGTTTACTTTATATCGTTCTGTTGAATGTTATGGATTATGAGAACGTGCTACTCGTGAAAAATGAGGTGTTCGTCTATCAGATTCTTTCAAGACAGTCTAATCGGGGTTACAGGGCTAATAACTGGAACCTAGAAACTCCCATGTGGACTGGAAGACTTCGTGTTATTGCCAAAGGTAAAGATCTCGTAATACGATTGGAAGATAAGAATTCTGGACAGTTAT]

[+] EMBL CD185673             [GTTGTTCGCAACTACTTCAGTTTGTCGCGTTATCCGTTTAGTTTTGTGTCACTGAGAAGTAGTTTGTTGACTTATTGTTTACTTTATATCGTTCTGTTGAATGTTATGGATTATGAGAACGTGCTACTCGTGAAAAATGAGGTGTTCGTCTATCAGATTCTTTCAAGACAGTCTAATCGGGGTTACAGGGCTAATAACTGGAACCTAGAAACTCCCATGTGGACTGGAAGACTTCGTGTTATTGCCAAAGGTAAAGATCTCGTAATACGATTGGAAGATAAGAATTCTGGACAGTTAT]


>consensus_10569#4 GTTGTTCGCAACTACTTCAGTTTGTCGCGTTATCCGTTTAGTTTTGTGTCACTGAGAAGT AGTTTGTTGACTTATTGTTTACTTTATATCGTTCTGTTGAATGTTATGGATTATGAGAAC GTGCTACTCGTGAAAAATGAGGTGTTCGTCTATCAGATTCTTTCAAGACAGTCTAATCGG GGTTACAGGGCTAATAACTGGAACCTAGAAACTCCCATGTGGACTGGAAGACTTCGTGTT ATTGCCAAAGGTAAAGATCTCGTAATACGATTGGAAGATAAGAATTCTGGACAGTTAT



consensusID : consensus_10569#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 204
fasta sequence
                              [GGTGGGAATATATTAGCAACGTTTAATAAAGATGGGGAATTAATGCTGTGGAATGATGATATACTTTGGTATGAAGGTGGTGTAATACAAGAATATTCTTGTTTTTCATCTGAATATTACTTATTGGATCAAACTGACGTATTAATTCCAAACCAATATGGGAAAATATGCTTTTCGAAACCAAATGGTCAGTACATTCTCCAG]

[+] EMBL CD119477             [GGTGGGAATATATTAGCAACGTTTAATAAAGATGGGGAATTAATGCTGTGGAATGATGATATACTTTGGTATGAAGGTGGTGTAATACAAGAATATTCTTGTTTTTCATCTGAATATTACTTATTGGATCAAACTGACGTATTAATTCCAAACCAATATGGGAAAATATGCTTTTCGAAACCAAATGGTCAGTACATTCTCCAG]


>consensus_10569#5 GGTGGGAATATATTAGCAACGTTTAATAAAGATGGGGAATTAATGCTGTGGAATGATGAT ATACTTTGGTATGAAGGTGGTGTAATACAAGAATATTCTTGTTTTTCATCTGAATATTAC TTATTGGATCAAACTGACGTATTAATTCCAAACCAATATGGGAAAATATGCTTTTCGAAA CCAAATGGTCAGTACATTCTCCAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10569#0      ATGAATACAAGAATATTCTGGTTATTACACCACACTTCATACAAAGTATATCATCATTCC 60
consensus_10569#3      ------------------------------------------------------------
consensus_10569#2      ------------------------------------------------------------
consensus_10569#4      ------------------------------------------------------------
consensus_10569#5      ------------------------------------------------------------
consensus_10569#1      ------------------------------------------------------------
                                                                                   

consensus_10569#0      ACAGCATTAATTCACCATTTTTATTAAACGTTGCTAATATATTCCCACCATTGGTGAGTA 120
consensus_10569#3      ------------------------------------------------------------
consensus_10569#2      ------------------------------------------------------------
consensus_10569#4      ------------------------------------------------------------
consensus_10569#5      ------------------------------------------------------------
consensus_10569#1      -----------------------------TTTTTATTTTTTTTTTTTTTATTGGGATAGA 31
                                                                                   

consensus_10569#0      GGCAAGTGAACAGAGTGACGTTGATGCAGATAGTGACCTCACAATAGATAAGGAAGACAA 180
consensus_10569#3      ------------------------------------------------------------
consensus_10569#2      -------------------------------GCCGGTGTTGTAAAGGAAAAGCTAGTACT 29
consensus_10569#4      ------------------------------------------------------------
consensus_10569#5      ------------------------------------------------------------
consensus_10569#1      CTGAAGTCGACACAATTTATTCTGTCAGAAAAAGAATCAATATGATAAAATGTGAAAATA 91
                                                                                   

consensus_10569#0      ATTGTAGAAATGTATTGTACCATCCCAACATCCTATAGCCAAATCATCATGTATTAAGTC 240
consensus_10569#3      ------------------------------------------------------------
consensus_10569#2      TCATATTGTAGGACAGTGCTCAGTGGAGTACCCTAGGGCACAGTTTTCACCTCTTC--TT 87
consensus_10569#4      ------------------------------------------------------------
consensus_10569#5      ------------------------------------------------------------
consensus_10569#1      GTAAGTTTTGTCAAAAAAGACTGTATGAATCCCGTACGGGGAACCACTAGCGGTTCATCC 151
                                                                                   

consensus_10569#0      TTCTTGTTTATTGTTTAGAACAGATGGTAATCGGAATGCAATTGAAACAATAGGATGACT 300
consensus_10569#3      ----------------------------------------ATTGAAACAATAGGATGACT 20
consensus_10569#2      ATCATTAATCTTGTTATATGCTGACGAAATTCAGATATTGAAGGCTACAG-AAAGTAAAT 146
consensus_10569#4      -------------------------------------------GTTGTTC-GCAACTACT 16
consensus_10569#5      ------------------------------------------------------------
consensus_10569#1      TATTCGGGATTCGTTACAGTGATATTTGTAACGAAATCCGACTACATAAATAAAATTCAC 211
                                                                                   

consensus_10569#0      GGATACATTTATTGACTTAAATGGGTGAAGCTTT-ACAGAACA-GACACTTGTCGATAGC 358
consensus_10569#3      GGATACATTTATTGACTTAAATGGGTGAAGCTTT-ACAGAACA-GACACTTGTCGATAGC 78
consensus_10569#2      AAAGTCGTTTAGAACATCAGA--AAGTTTGTGTC-ACTGAGAA-GTAGTTTGTTGACTTA 202
consensus_10569#4      TCAGTTTGTCGCGTTATCCGTTTAGTTTTGTGTC-ACTGAGAA-GTAGTTTGTTGACTTA 74
consensus_10569#5      ----------------------GGTGGGAATATA-TTAGCAAC-GTTTAATAAAGATGGG 36
consensus_10569#1      AAAGGGGATAATTGAAGAAAGGTGAGAAAATATTGATAGAAACCATATATTTATGTCGCA 271
                                                       *     *           *   *     

consensus_10569#0      TCACTGGATTTAACATCAATTTGTGAAACATC-----CCATAAGTACAC-CATACAGTCT 412
consensus_10569#3      TCACTGGATTTAACATCAATTTGTGAAACATC-----CCATAAGTACAC-CATACAGTCT 132
consensus_10569#2      TTGTTT-ACTTTATATCGTTCTGTTGAATGTTATGGATTATGAGAACGT-GCTACTCGTG 260
consensus_10569#4      TTGTTT-ACTTTATATCGTTCTGTTGAATGTTATGGATTATGAGAACGT-GCTACTCGTG 132
consensus_10569#5      GAATTA---ATGCTGTGGAATGATGATATACTT----TGGTATGAAGGT-GGTGTAATAC 88
consensus_10569#1      GGAGCACGTTTTTAACAAATGCACGCAATAAGGATCCTCACATTAATATTGGTGCAATA- 330
                                 *                *                 *      *       

consensus_10569#0      AAGTCACCGGTAGCAACCAGTTGACGTCTTGGATGCCATGCAGAAGTAGTTACACATCGA 472
consensus_10569#3      AAGTCACCGGTAGCAACCAGTTGACGTCTTGGATGCCATGCAGAAGTAGTTACACATCGA 192
consensus_10569#2      AAAAATGAGGTGTTCGTCTATCAGATTCTTTCAAGACA-GTCTAATCGGGGTTACAGGGC 319
consensus_10569#4      AAAAATGAGGTGTTCGTCTATCAGATTCTTTCAAGACA-GTCTAATCGGGGTTACAGGGC 191
consensus_10569#5      AAGAATATTCTTGTTTTTCATCTGAATATTACTTATTGGATCAAACTGACGTATTAATTC 148
consensus_10569#1      AATCAGGTTTTAGTTGAAAGACTTTTACTTAAATATTG-GTAGGAT--GCTTCCTATTTC 387
                       **        *                 **              *          *    

consensus_10569#0      CGATGATATCCACATAACGATGCCAATTGTGAAATCACTGTTTTATCATGCACATTATAT 532
consensus_10569#3      CGATGATATCCACATAACGATGCCAATTGTGAAATCACTGTTTTATCATGCACATTATAT 252
consensus_10569#2      TAATAACTGGAACCTAGAAACTCCCAT-GTGGACTGGAAGACTT------CGTGTTATTG 372
consensus_10569#4      TAATAACTGGAACCTAGAAACTCCCAT-GTGGACTGGAAGACTT------CGTGTTATTG 244
consensus_10569#5      CAA--ACCAATATGGGAAAATATGCTTTTCGAAACCAAATGGTCA------GTACATTCT 200
consensus_10569#1      GAGCACTAAAGAGGAATGAATAAGAAGTGTGAAATAGAATAAATCCATATCGTATTTTAA 447
                                  *       *          * *                        *  

consensus_10569#0      TCAACATTGTGAGT-CACAGTAGACGCATCCCAGATAAAAATATCACCATCCTCTGAAGC 591
consensus_10569#3      TCAACATTGAGGTC-AAACGAATCCGAACGTTCTGCGAAACCAATCCCTACAAATTTAGT 311
consensus_10569#2      CCAAAGGTAAAGAT-CTCGTAATACGATTGGAAGATAAGAATTCTGGACAGTTATATGCT 431
consensus_10569#4      CCAAAGGTAAAGAT-CTCGTAATACGATTGGAAGATAAGAATTCTGGACAGTTAT----- 298
consensus_10569#5      CCAG-------------------------------------------------------- 204
consensus_10569#1      TGGTATTCAGAACTGCCCAGAATTCCCGAGGAAATCACTTAGAAGATCGACGTTTGAAGT 507
                                                                                   

consensus_10569#0      ACTCATCAACCAAAGTTCTGAAATGAACTTTTTGGGAGATTTTACGTCTTCAGATTTACT 651
consensus_10569#3      --TTCCCCACTATCATTCATTAATCGAATAACAATGAAACTTT---TTTT----TTGACT 362
consensus_10569#2      GAATGCCCAGTAGACTCATTCCCTGGGATATCCGTTGAACCAG---TTATTGACTCAAGT 488
consensus_10569#4      ------------------------------------------------------------
consensus_10569#5      ------------------------------------------------------------
consensus_10569#1      AGTCGATGGGACATTCGGTGTGCACACAGGATTTGTATAGTTTGCTTGTGATGAGTCACT 567
                                                                                   

consensus_10569#0      GGGAAATTCCTCAAGGAAACATAAACTTTGAACGCTTGAATGGTGTCCAGTTAATGA-CC 710
consensus_10569#3      ATTGAGTTCGATACTGA---------TTTAACTTTTTGGTTGATAT--AACTGTTGAATT 411
consensus_10569#2      CGATTTTTTGTTATTCGA------TTAATGAATGATAGTGGGGAAACTAAATTTGTAGGG 542
consensus_10569#4      ------------------------------------------------------------
consensus_10569#5      ------------------------------------------------------------
consensus_10569#1      ATTAAATAAGTTACCAGACACAGGAGTANGTATCTTCCTACAACGCGATATACACACGAG 627
                                                                                   

consensus_10569#0      ACAGTTCACGTAGAGTGGACAATTCTACGAAAGCGATCGTACCACACCTAGTTCCATACA 770
consensus_10569#3      ATAGATTGCATTCAACAAGACCTTCTATAATG---------------------------- 443
consensus_10569#2      ATTGGTTTCGCAGAACGTTCGGATTCGTTTGACCTCAATGTAGCAATTCAAGACCATTTC 602
consensus_10569#4      ------------------------------------------------------------
consensus_10569#5      ------------------------------------------------------------
consensus_10569#1      ACCNGAGAAACAGCCAGGTGGCAGGAGGAGNGGGGCANGTAGACCACCCGNATAATCGCA 687
                                                                                   

consensus_10569#0      CCAATACTTTGGCAGCTGAATTCATTTCCACAGATGTTGGCACATCCATGGAACCATTTG 830
consensus_10569#3      ------------------------------------------------------------
consensus_10569#2      AAATGGTTAAAACAGGAAAAAGAAGCTAAAGAAATTGAAGAAAACGCAGCCAACCAACCA 662
consensus_10569#4      ------------------------------------------------------------
consensus_10569#5      ------------------------------------------------------------
consensus_10569#1      GAACTAAGGGNNAGCGTNGTAACACTTTGATATTGGGATATTGGATCATACCCCTGTACG 747
                                                                                   

consensus_10569#0      AAGTTACAATCGGTTTATATATCATATTCCTCTGCATAGGTTTAATCAGAGTGCATTTTG 890
consensus_10569#3      ------------------------------------------------------------
consensus_10569#2      GCTAAATATATGAGTTTCA----------------------------------------- 681
consensus_10569#4      ------------------------------------------------------------
consensus_10569#5      ------------------------------------------------------------
consensus_10569#1      ACAGGGTATTGCAGATTTAATTTTATTTTTTCCCCTTCTTTGAAACTCATATATTAGCGT 807
                                                                                   

consensus_10569#0      GCAAATTTACACGGAAGAGTATTTGACTATTGTTCATGTCTAATTGACTTTGTACACCGA 950
consensus_10569#3      ------------------------------------------------------------
consensus_10569#2      ------------------------------------------------------------
consensus_10569#4      ------------------------------------------------------------
consensus_10569#5      ------------------------------------------------------------
consensus_10569#1      GGTTGGTTGGCTGCGTTTTCTTCAATTTCTTTAGCTTCTTTTTCCTGTTTAACATCACGC 867
                                                                                   

consensus_10569#0      AATCATTAAGATACAACAATGAGAGGCCTAACGCATGGATCCATTCACTGGAATCTTGGT 1010
consensus_10569#3      ------------------------------------------------------------
consensus_10569#2      ------------------------------------------------------------
consensus_10569#4      ------------------------------------------------------------
consensus_10569#5      ------------------------------------------------------------
consensus_10569#1      AAAAC------------------------------------------------------- 872
                                                                                   

consensus_10569#0      TGATAGCTAATTCGCAAAACGAATTTGGATATTTTACTAAAAACTCATAGTTTACACAAA 1070
consensus_10569#3      ------------------------------------------------------------
consensus_10569#2      ------------------------------------------------------------
consensus_10569#4      ------------------------------------------------------------
consensus_10569#5      ------------------------------------------------------------
consensus_10569#1      ------------------------------------------------------------
                                                                                   

consensus_10569#0      TAAACTTCTTCATCGCATCAATTTTGTCACCGAAAGGACATGATTCTAGTTTCCTTTTCC 1130
consensus_10569#3      ------------------------------------------------------------
consensus_10569#2      ------------------------------------------------------------
consensus_10569#4      ------------------------------------------------------------
consensus_10569#5      ------------------------------------------------------------
consensus_10569#1      ------------------------------------------------------------
                                                                                   

consensus_10569#0      ACTTTTC 1137
consensus_10569#3      -------
consensus_10569#2      -------
consensus_10569#4      -------
consensus_10569#5      -------
consensus_10569#1      -------
                              




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)