cluster # 10570

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Schistosoma mansoni
cluster # 10570 cluster # 10570 Sequences # 18 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10570#0 length = 1552 sequences # 15

consensus_10570#1 length = 587 sequences # 1
consensus_10570#2 length = 515 sequences # 2

consensusID : consensus_10570#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1552
fasta sequence

                              [ATGTCCGCTTAAAGTGAGTTCCTACTTCAGAAGAGACACNAGAAGCAGAGGACTGATGTTGCTGGAGATGTGAAAAGTGATGAGGTTGAACAAGACCTGAGTTTATACTATTATTAATATTTATGTCTGCAACACCAGATGAAAGCCCAGTTGATATTGAAGATCCATGAATTATGGAATGTGACTGAACAATTTGTTGCGGCATAACATTTTGTGAAGAACGAATTGTTGGGGGCATAATATTAGGAGGGATAGGTGGTA-CCAATTGTTTTG-GACAA-C-TATTTCGTAACAGAAAGTCAGCGCAATCATAATTTTTAGAACAATGAGCGTAATAGAATGCATTTCTTCCTTCATGATCTGTCACAGCTGGATCACCATTGTACCATAAAAGCAACTGTAAATAAACTAGATTTCCGAGAGTAGCAGCAATGTGAATAGCTGCTCGTGGATCTTGAAGTGAATAAGCCGCATTGACTGTTTCAGGTGTAGCCAAAGCTAGACAAAGTATAACTTGACGTGTATCTTGACGAGCTATTGCATCAATCAACTGTCGTTGAAGTGGAGCATCAGGATAGGGTAATGGAGGCAGAAATTCTCGATGTTGATATTTAGCTCGAATCCAAACTTCTTTTTCCTCTCGTGAACTTGAAGGATCTGGTTTTCGTAGATTGCCAGCATTTACAGGCGCAGCAGCTTCCCAAACAGAATTAGCTAATGTATTACCAATAGCGCTCATTACACTGACAGATTCAGTAGACCATTCATCTAAGTGTAAAGAACGTATGCGTGAAATATGTGTTCCAAGTTGTCGATGTATACCACTGCAACTAATACAAACCATAGCGCCTAAATTAAGACTTGCCCAATCTGGTTCTGGTGCACCACAATCTGCACAAAAATCATTTCCAGCTGCAGATCTTATGCTTTGAATTAAATGCTCTGTAACAGCCAATTCATTAGCATCACCTGCACCACAACGACTTGAATTAAGACTGTTAGAATCCCCATGTCGACCACTCCCTGAACCTAATCCACTAACATTGGAAAGGTGGTTGGAACCGCTGGTGCCGCCAACTCCTGTAGTACACCCAGTAGCAGCAATAGCACGAGTACGTTTAGATGATTCATTTAATTGAAGCCTTGTCATAATAGCACGTTCAATATGCATAACCCATTCATCTCGTTCATCTGGACCAGTCGCTTCAAAATGCCATTGACGATCCATTGATATCAATTGAAATTCATAACCTTCGGAATCTGAACCATCAGCATTATTACTCTTTGGATTGGATTTAA-TACGTCTATGACG-TTTTTTCACTGATGATGAATCTTTGCCTCCTGATGCTGAATTATCATTAAGAGGGGCTGAATTTTCAGTAGGATTCTTAACATCTACGCCAGTTGACCGACGATCTGCACCACCATCATTTAATTGACTTCGCAACAGTCCATTACTTGTTATACGACTTCCAACTTGACGAAATGCTACACCAGGAATTTTGACGGTTGTTCTACTTAAGTCAATTTCTTTACCGTGTGAATTATCCATATA]

[-] EMBL CD130346             [ATGTCCGCTTAAAGTGAGTTCCTACTTCAGAAGAGACACNAGAAGCAGAGGACTGATGTTGCTGGAGATGTGAAAAGTGATGAGGTTGAACAAGACCTGAGTTTATACTATTATTAATATTTATGTCTGCAACACCAGATGAAAGCCCAGTTGATATTGAAGATCCATGAATTATGGAATGTGACTGAACAATTTGTTGCGGCATAACATTTTGTGAAGAACGAATTGTTGGGGGCATAATATTAGGAGGGATAGGTGGTA CCAATTGTTTTG GACAA C TATTTCGTAACAGAAAGTCAGCGCAATCATAATTTTTAGAACAATGAGCGTAATAGAATGCATTTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD069733             [                                                                                            AGACCTGAGTTTATACTATTATTAATATTTATGTCTGCAACACCAGATGAAAGCCCAGTTGATATTGAAGATCCATGAATTATGGAATGTGACTGAACAATTTGTTGCGGCATAACATTTTGTGAAGAACGAATTGTTGGGGGCATAATATTAGGAGGGATAGGTGGTA CCAATTGTTTTG GACAA C TATTTCGTAACAGAAAGTCAGCGCAATCATAATTTTTAGAACAATGAGCGTAATAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD167949             [                                                                                                                                                                                                                                                          taagaGTGGTACCCAATTGTTTTGAGACAATCTTATTTCGTAACAGAAAGTCAGCGCAATCATAATTTTTAGAACAATGAGCGTAATAGAATGCATTTCTTCCTTCATGATCTGTCACAGCTGGATCACCATTGAACCATAAAAGCAACTGTAAATAAACTAAATTTCCGAGAGTAGCAGCAATGTGAATATCTGCTCGCGGATCTTGAAGTGAATAAACCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD089748             [                                                                                                                                                                                                                                                                  GTA CCAATTGTTTTG GACAA C TATTTCGTAACAGAAAGTCAGCGCAATCATAATTTTTAGAACAATGAGCGTAATAGAATGCATTTCTTCCTTCATGATCTGTCACAGCTGGATCACCAATGTACCATAAAAGCAACTGTAAATAAACTAGATTTCCGAGAGTAGCAGCAATGTGAATAGCTGCTCGTGTATCTTGAAGTGAATAAGCCGCATTGACTGTTTCAGGTGTAGCCAAAGCTAGACAAAGTATAACTTGACGTGTATCTTGACGAGCTATTGCATCAATCAACTGTCGTTGAAGTGGAGCATCAGGATAGGGTAATGGAGGCAGAAATTCTCGATGTTGATATTTAGCTCGAATCCAAACTTCTTTTTCCTCTCGTGAACTTGAAGGATCTGGTTCTCGTAGATTGCCAGCATTTACAGGCGCAGCAGCTTCCCAAACAGAATTAGCTAATGTATTACCAATAGCGCTCATTACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD089851             [                                                                                                                                                                                                                                                                  GTA CCAATTGTTTTG GACAA C TATTTCGTAACAGAAAGTCAGCGCAATCATAATTTTTAGAACAATGAGCGTAATAGAATGCATTTCTTCCTTCATGATCTGTCACAGCTGGATCACCATTGTACCATAAAAGCAACTGTAAATAAACTAGATTTCCGAGAGTAGCAGCAATGTGAATAGCTGCTCGTGGATCTTGAAGTGAATAAGCCGCATTGACTGTTTCAGGTGTAGCCAAAGCTAGACAAAGTATAACTTGACGTGTATCTTGACGAGCTATTGCATCAATCAACTGTCGTTGAAGTGGAGCATCAGGATAGGGTAATGGAGGCAGAAATTCTCGATGTTGATATTTAGCTCGAATCCAAACTTCTTTTTCCTCTCGTGAACTTGAAGGATCTGGTTTTCGTAGATTGGCAGCATTTACAGGCGCAGCAGCTTCCCAAACAGAATTAGCTAATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD089745             [                                                                                                                                                                                                                                                                   TA CCAATTGTTTTG GACAA C TATTTCGTAACAGAAAGTCAGCGCAATCATAATTTTTAGAACAATGAGCGTAATAGAATGCATTTCTTCCTTCATGATCTGTCACAGCTGGATCACCAATGTACCATAAAAGCAACTGTAAATAAACTAGATTTCCGAGAGTAGCAGCAATGTGAATAGCTGCTCGTGGATCTTGAAGTGAATAAGCCGCATTGACTGTTTCAGGTGTAGCCAAAGCTAGACAAAGTATAACTTGACGTGTATCTTGACGAGCTATTGCATCAATCAACTGTCGTTGAAGTGGAGCATCAGGATAGGGTAATGGAGGCAGAAATTCTCGATGTTGATATTTAGCTCGAATCCAAACTTCTTTTTCCTCTCGTGAACTTGAAGGATCTGGTTTTCGTAGATTGCCAGCATTTACAGGCGCAGCAGCTTCCCAAACAGAATTAGCTAATGTATTACCAATAGCGCTCATTACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD089713             [                                                                                                                                                                                                                                                                      CCAATTGTTTTG GACAA C TATTTCGTAACAGAAAGTCAGCGCAATCATAATTTTTAGAACAATGAGCGTAATAGAATGCATTTCTTCCTTCATGATCTGTCACAGCTGGATCACCAATGTACCATAAAAGCAACTGTAAATAAACTAGATTTCCGAGAGTAGCAGCAATGTGAATAGCTGCTCGTGGATCTTGAAGTGAATAAGCCGCATTGACTGTTCCAGGTGTAGCCAAAGCTAGACAAAGTATAACTTGACGTGTATCTTGACGAGCTATTGCATCAATCAACTGTCGTTGAAGTGGAGCATCAGGATAGGGTAATGGAGGCAGAAATTCTCGATGTTGATATTTAGCTCGAATCCAAACTTCTTTTTCCTCTCGTGAACTTGAAGGATCTGGTTTTCGTAGATTGCCAGCATTTACAGGCGCAGCAGCTTCCCAAACAGAATTAGCTAATGTATTACCAATAGCGCTCATTACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD184591             [                                                                                                                                                                                                                                                                                                           GTCAGCGCAATCATAATTTTTAGAACAATGAGCGTAATAGAATGCATTTCTTCCTTCATGATCTGTCACAGCTGGATCACCATTGTACCATAAAAGCAACTGTAAATAAACTAGATTTCCGAGAGTAGCAGCAATGTGAATAGCTGCTCGTGGATCTTGAAGTGAATAAGCCGCATTGACTGTTTCAGGTGTAGCCAAAGCTAGACAAAGTATAACTTGACGTGTATCTTGACGAGCTATTGCATCAATCAACTGTCGTTGAAGTGGAGCATCAGGATAGGGTAATGGAGGCAGAAATTCTCGATGTTGATATTTAGCTCGAGTCCAAACTTCTTTTTCCTCTCGTGAACTTGAAGGATCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD159039             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAGCTAGACAAAGTATAACTTGACGTGTATCTTGACGAGCTATTGCATCAATCAACTGTCGTTGAAGTGGAGCATCAGGATAGGGTAATGGAGGCAGAAATTCTCGATGTTGATATTTGGCTCGAATCCAAACTTCTTTTTCCTCTCGTGAACTTGAAGGATCTGGTTTTCGTAGATTGCCAGCATTTACAGGCGCAGCAGCTTCCCAAACAGAATTAGCTAATGTATTACCAATAGCGCTCATTACACTGACAGATTCAGTAGACCATTCATCTAAGTGTAAAGAACGTATGCGTGAAATATGTGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD154311             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTAATGGAGGCAGAAATTCTCGATGTTGATATTTAGCTCGAATCCAAACTTCCTTTTCCTCTCGTGAACTTGAAGGATCTGGTTTTCGTAGATTGCCAGCATTTACAGGAGCAGCAGCTTCCCAAACAGAATTAGCTAATGTATTACCAATAGCGCTCATTACACTGACAGATTCAGTAGACCATTCATCTAAGTGTAAAGAACGTGTGCGTGAAATATGTGTTCCAAGTTGTCGATGTATACCACTGCAACTAATACAAACCATAGCGCCTAAATTAAGACTTGCCCAATCTGGTTCTGGTGCACCACAATCTGCACAAAAATCATTTCCAGCTGCAGATCTTATGCTTTGAATTAAATGCTCTGTAACAGCCAATTCATTAGCATCACCTGCACCACAACGACTTGAATTAAGACTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD154770             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TAATGGAGGCAGAAATTCTCGATGTTGATATTTAGCTCGAATCCAAACTTCCTTTTCCTCTCGTGAACTTGAAGGATCTGGTTTTCGTAGATTGCCAGCATTTACAGGAGCAGCAGCTTCCCAAACAGAATTAGCTAATGTATTACCAATAGCGCTCATTACACTGACAGATTCAGTAGACCATTCATCTAAGTGTAAAGAACGTATGCGTGAAATATGTGTTCCAAGTTGTCGATGTATACCACTGCAACTAATACAAACCATAGCGCCTAAATTAAGACTTGCCCAATCTGGTTCTGGTGCACCACAATCTGCACAAAAATCATTTCCAGCTGCAGATCTTATGCTTTGAATTAAATGCTCTGTAACAGCCAATTCATTAGCATCACCTGCACCACAACGACTTGAATTAAGACTGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD129312             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGAGGCAGAAATTCTCGATGTTGATATTTAGCTCGAATCCAAACTTCTTTTTCCTCTCGTGAACTTGAAGGATCTGGTTTTCGTAGATTGCCAGCATTTACAGGCGCAGCAGCTTCCCAAACAGAATTAGCTAATGTATTACCAATAGCGCTCATTACACTGACAGATTCAGTAGACCATTCATCTAAGTGTAAAGAACGTATGCGTGAAATATGTGTTCCAAGTTGTCGATGTATACCACTGCAACTAATACAAACCATAGCGCCTAAATTAAGACTTGCCCAATCTGGTTCTGGTGCACCACAATCTGCACAAAAATCATTTCCAGCTGCAGATCTTATGCTTTGAATTAAATGCTCTGTAACAGCCAATTCATTAGCATCACCTGCACCACAACGACTTGAATTAAGACTGTTAGAATCCCCATGTCGACCACTCCCTGAACCTAATCCACTAACATTGGAAAGGTGGTTGGAACCGCTGGTGCCGCCAACTCCTGTAGTACACCCAGTAGCAGCAATAGCACGAGTACGTTTAGATGATTCATTTAATTGAAGCCTTGTCATAATAGCACGTTCAATATGCATAACCCATTCATCTCGTTCATCTGGACCAGTCGCTTC AAATGCCATTGACGATCCATTG                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD095288             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTTGAATTAAGACTGTTAGAATCCCCATGTCGACCACTCCCTGAACCTAATCCACTAACATTGGAAAGGTGGTTGGAACCGCTGGTGCCGCCAACTCCTGTAGTACACCCAGTAGCAGCAATAGCACGAGTACGTTTAGATGATTCATTTAATTGAAGCCTTGTCATAATAGCACGTTCAATATGCATAACCCATTCATCTCGTTCATCTGGACCAGTCGCTTCAAAATGCCATTGACGATCCATTGATATCAATTGAAATTCATAACCTTCGGAATCTGAACCATCAGCATTATTACTCTTTGGATTGGATTTAA TACGTCTATGACGTTTTTTTCACTGATGATGAATCTTTGCCTCCTGATGCTGAATTATCATTAAGAGGGGCTGAATTTTCAGTAGGATTCTTAACATCTACGCCAGTTGACCGACGATCTGCACCACCATCATTTAATTGACTTCGCAACAGTCCATTACTTGTTATACGACTTCCAACTTGACGAAATGCTACACCAGGAATTTTGACGGTTGTTCTACTTAAGTCAATTTCTTTACCGTGTGAATTATCCATATA]
[+] EMBL CD187382             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CACTAACATTGGAAAGGTGGTTGGAACCGCTGGTGCCGCCAACTCCTGTAGTACACCCAGTAGCAGCAATAGCACGAGTACGTTTAGATGATTCATTTAATTGAAGCCTTGTCATAATAGCACGTTCAATATGCATAACCCATTCATCTCGTTCATCTGGACCAGTCGCTTCAAAATGCCATTGACGATCCATTGATATCAATTGAAATTCATAACCTTCGGAATCTGAACCATCAGCATTATTACTCTTTGGATTGGATTTAATTCCGTCTATGACG TTTTTTCACTGATGATGAATCTTTGCCTCCTGATGCTTGATTATCATTTAGAAGGGCTGAATTTTCAGTAGGATTCTTA                                                                                                                                                                    ]
[-] EMBL CD191765             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AACCCATTCATCTCGTTCATCTGGACCAGTCGCTTCAAAATGCCATTGACGATCCATTGATATCAATTGAAATTCATAACCTTCGGAATCTGAACCATCAGCATTATTACTCTTTGGATTGGATTTAA TACGTCTATGACG TTTTTTCACTGATGATGAATCTTTGCCTCCTGATGCTGAATTATCATTAAGAGGGGCTGAATTTTCAGTAGGATTCTTAACATCTACGCCAGTTGACCGACGATCTATACCACCATCATTTAATTGACTTCGCAACAGTCCATTACTTGTTATACGACTTCCAACTTGACGAAA                                                                     ]




>consensus_10570#0
ATGTCCGCTTAAAGTGAGTTCCTACTTCAGAAGAGACACNAGAAGCAGAGGACTGATGTT
GCTGGAGATGTGAAAAGTGATGAGGTTGAACAAGACCTGAGTTTATACTATTATTAATAT
TTATGTCTGCAACACCAGATGAAAGCCCAGTTGATATTGAAGATCCATGAATTATGGAAT
GTGACTGAACAATTTGTTGCGGCATAACATTTTGTGAAGAACGAATTGTTGGGGGCATAA
TATTAGGAGGGATAGGTGGTACCAATTGTTTTGGACAACTATTTCGTAACAGAAAGTCAG
CGCAATCATAATTTTTAGAACAATGAGCGTAATAGAATGCATTTCTTCCTTCATGATCTG
TCACAGCTGGATCACCATTGTACCATAAAAGCAACTGTAAATAAACTAGATTTCCGAGAG
TAGCAGCAATGTGAATAGCTGCTCGTGGATCTTGAAGTGAATAAGCCGCATTGACTGTTT
CAGGTGTAGCCAAAGCTAGACAAAGTATAACTTGACGTGTATCTTGACGAGCTATTGCAT
CAATCAACTGTCGTTGAAGTGGAGCATCAGGATAGGGTAATGGAGGCAGAAATTCTCGAT
GTTGATATTTAGCTCGAATCCAAACTTCTTTTTCCTCTCGTGAACTTGAAGGATCTGGTT
TTCGTAGATTGCCAGCATTTACAGGCGCAGCAGCTTCCCAAACAGAATTAGCTAATGTAT
TACCAATAGCGCTCATTACACTGACAGATTCAGTAGACCATTCATCTAAGTGTAAAGAAC
GTATGCGTGAAATATGTGTTCCAAGTTGTCGATGTATACCACTGCAACTAATACAAACCA
TAGCGCCTAAATTAAGACTTGCCCAATCTGGTTCTGGTGCACCACAATCTGCACAAAAAT
CATTTCCAGCTGCAGATCTTATGCTTTGAATTAAATGCTCTGTAACAGCCAATTCATTAG
CATCACCTGCACCACAACGACTTGAATTAAGACTGTTAGAATCCCCATGTCGACCACTCC
CTGAACCTAATCCACTAACATTGGAAAGGTGGTTGGAACCGCTGGTGCCGCCAACTCCTG
TAGTACACCCAGTAGCAGCAATAGCACGAGTACGTTTAGATGATTCATTTAATTGAAGCC
TTGTCATAATAGCACGTTCAATATGCATAACCCATTCATCTCGTTCATCTGGACCAGTCG
CTTCAAAATGCCATTGACGATCCATTGATATCAATTGAAATTCATAACCTTCGGAATCTG
AACCATCAGCATTATTACTCTTTGGATTGGATTTAATACGTCTATGACGTTTTTTCACTG
ATGATGAATCTTTGCCTCCTGATGCTGAATTATCATTAAGAGGGGCTGAATTTTCAGTAG
GATTCTTAACATCTACGCCAGTTGACCGACGATCTGCACCACCATCATTTAATTGACTTC
GCAACAGTCCATTACTTGTTATACGACTTCCAACTTGACGAAATGCTACACCAGGAATTT
TGACGGTTGTTCTACTTAAGTCAATTTCTTTACCGTGTGAATTATCCATATA

consensusID : consensus_10570#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 587
fasta sequence

                              [TTTTACTTTCTTCATAACAAATGGACGTAACTTCTTTAACCGAGAGAATTCTTTGTGGTTGTACCTTTGCTAACTGAACTGTTTCTCCCATTGTTATTATTTTACTATCATACACTAATTTCTGTTCTTTATTGTTCCCTTTTTTCTTATAAGCATTTAATATCCTCCATCTCTTCAAATCCTCATAGTTATTGATATCTACACACACCCGCATATACACAATACAAAACATTGATTAACTGAAGTACAAATTCGGGACCTACAAGTTGTACATATAAAAAAACATCAACCTTACCTGGTGCACCACAATCTGCACAAACATCATTTCCAGCTGCAGATCTTATGCTTTGAATTAAATGCTCTGTAACAGCCAATTCATTAGCATCACCTGCACCACAACGACTTGAATTAAGACTGTTAGAATCCCCATGTCGACCACTCCCTGAACCTAATCCACTAACATTGGAAAGGTGGTTGGAACCGCTGGTGCCGCCAACTCCTGTAGTACACCCAGTAGCAGCAACAGCACGAGTACCTNTAGATGATTCATTTAATTGAAGCCTTGTCATAATAGCACGTTCAATATG]

[+] EMBL CD177944             [TTTTACTTTCTTCATAACAAATGGACGTAACTTCTTTAACCGAGAGAATTCTTTGTGGTTGTACCTTTGCTAACTGAACTGTTTCTCCCATTGTTATTATTTTACTATCATACACTAATTTCTGTTCTTTATTGTTCCCTTTTTTCTTATAAGCATTTAATATCCTCCATCTCTTCAAATCCTCATAGTTATTGATATCTACACACACCCGCATATACACAATACAAAACATTGATTAACTGAAGTACAAATTCGGGACCTACAAGTTGTACATATAAAAAAACATCAACCTTACCTGGTGCACCACAATCTGCACAAACATCATTTCCAGCTGCAGATCTTATGCTTTGAATTAAATGCTCTGTAACAGCCAATTCATTAGCATCACCTGCACCACAACGACTTGAATTAAGACTGTTAGAATCCCCATGTCGACCACTCCCTGAACCTAATCCACTAACATTGGAAAGGTGGTTGGAACCGCTGGTGCCGCCAACTCCTGTAGTACACCCAGTAGCAGCAACAGCACGAGTACCTNTAGATGATTCATTTAATTGAAGCCTTGTCATAATAGCACGTTCAATATG]




>consensus_10570#1
TTTTACTTTCTTCATAACAAATGGACGTAACTTCTTTAACCGAGAGAATTCTTTGTGGTT
GTACCTTTGCTAACTGAACTGTTTCTCCCATTGTTATTATTTTACTATCATACACTAATT
TCTGTTCTTTATTGTTCCCTTTTTTCTTATAAGCATTTAATATCCTCCATCTCTTCAAAT
CCTCATAGTTATTGATATCTACACACACCCGCATATACACAATACAAAACATTGATTAAC
TGAAGTACAAATTCGGGACCTACAAGTTGTACATATAAAAAAACATCAACCTTACCTGGT
GCACCACAATCTGCACAAACATCATTTCCAGCTGCAGATCTTATGCTTTGAATTAAATGC
TCTGTAACAGCCAATTCATTAGCATCACCTGCACCACAACGACTTGAATTAAGACTGTTA
GAATCCCCATGTCGACCACTCCCTGAACCTAATCCACTAACATTGGAAAGGTGGTTGGAA
CCGCTGGTGCCGCCAACTCCTGTAGTACACCCAGTAGCAGCAACAGCACGAGTACCTNTA
GATGATTCATTTAATTGAAGCCTTGTCATAATAGCACGTTCAATATG

consensusID : consensus_10570#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 515
fasta sequence

                              [GGTACCAATTGTTTTGGACAACTATTTCGTAACAGAAAGTCAGCGCAATCATAATTTTTAGAACAATGAGCGTGATAGAATGCATTTCTTCCTTCATGATCTGTCACAGCTGGATCACCATTGTACCATAAAAGCAACTGTAAATAAACTAGATTTCCGAGAGTAGCAGCAATGTGAATAGCTGCTCGTGGATCTTGAAGTGAATAAGCCGCATTGACTGTTTCAGGTGTAGCCAAAGCTAGACAAAGTATAACTTGACGTGTATCTTGACGAGCTATTGCATCAATCAACTGTCGTTGAAGTGGAGCATCAGGATAGGGTAATGGAGGCAGAAATTCTCGATGTTGATATTTAGCTCGAATCCAAACTTTCTTTTCCTCTCGTGAACTTGAAGGATCTGGTTTTCGTAGACCATTCATCTAAGTGTAAAGAACGTATGCGTGAAATATGTGTTCCAAGTTGTCGATGTATACCACTGCAACTAATACAAACCATAGCGCCTAAATTAAGACTTG]

[+] EMBL CD167956             [GGTACCAATTGTTTTGGACAACTATTTCGTAACAGAAAGTCAGCGCAATCATAATTTTTAGAACAATGAGCGTGATAGAATGCATTTCTTCCTTCATGATCTGTCACAGCTGGATCACCATTGTACCATAAAAGCAACTGTAAATAAACTAGATTTCCGAGAGTAGCAGCAATGTGAATAGCTGCTCGTGGATCTTGAAGTGAATAAGCCGCATTGACTGTTTCAGGTGTAGCCAAAGCTAGACAAAGTATAACTTGACGTGTATCTTGACGAGCTATTGCATCAATCAACTGTCGTTGAAGTGGAGCATCAGGATAGGGTAATGGAGGCAGAAATTCTCGATGTTGATATTTAGCTCGAATCCAAACTTTCTTTTCCTCTCGTGAACTTGAAGGATCTGGTTTTCGTAGACCATTCATCTAAGTGTAAAGAACGTATGCGTGAAATATGTGTTCCAAGTTGTCGATGTATACCACTGCAACTAATACAAACCATAGCGCCTAAATTAAGACTTG]
[+] EMBL CD167966             [GGTACCAATTGTTTTGGACAACTATTTCGTAACAGAAAGTCAGCGCAATCATAATTTTTAGAACAATGAGCGTGATAGAATGCATTTCTTCCTTCATGATCTGTCACAGCTGGATCACCATTGTACCATAAAAGCAACTGTAAATAAACTAGATTTCCGAGAGTAGCAGCAATGTGAATAGCTGCTCGTGGATCTTGAAGTGAATAAGCCGCATTGACTGTTTCAGGTGTAGCCAAAGCTAGACAAAGTATAACTTGACGTGTATCTTGACGAGCTATTGCATCAATCAACTGTCGTTGAAGTGGAGCATCAGGATAGGGTAATGGAGGCAGAAATTCTCGATGTTGATATTTAGCTCGAATCCAAACTTTCTTTTCCTCTCGTGAACTTGAAGGATCTGGTTTTCGTAGACCATTCATCTAAGTGTAAAGAACGTATGCGTGAAATATGTGTTCCAAGTTGTCGATGTATACCACTGCAACTAATACAAACCATAGCGCCTAAATTAAGACTTG]




>consensus_10570#2
GGTACCAATTGTTTTGGACAACTATTTCGTAACAGAAAGTCAGCGCAATCATAATTTTTA
GAACAATGAGCGTGATAGAATGCATTTCTTCCTTCATGATCTGTCACAGCTGGATCACCA
TTGTACCATAAAAGCAACTGTAAATAAACTAGATTTCCGAGAGTAGCAGCAATGTGAATA
GCTGCTCGTGGATCTTGAAGTGAATAAGCCGCATTGACTGTTTCAGGTGTAGCCAAAGCT
AGACAAAGTATAACTTGACGTGTATCTTGACGAGCTATTGCATCAATCAACTGTCGTTGA
AGTGGAGCATCAGGATAGGGTAATGGAGGCAGAAATTCTCGATGTTGATATTTAGCTCGA
ATCCAAACTTTCTTTTCCTCTCGTGAACTTGAAGGATCTGGTTTTCGTAGACCATTCATC
TAAGTGTAAAGAACGTATGCGTGAAATATGTGTTCCAAGTTGTCGATGTATACCACTGCA
ACTAATACAAACCATAGCGCCTAAATTAAGACTTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10570#0      ATGTCCGCTTAAAGTGAGTTCCTACTTCAGAAGAGACACNAGAAGCAGAGGACTGATGTT 60
consensus_10570#2      ------------------------------------------------------------
consensus_10570#1      ------------------------------------------------------------
                                                                                   

consensus_10570#0      GCTGGAGATGTGAAAAGTGATGAGGTTGAACAAGACCTGAGTTTATACTATTATTAATAT 120
consensus_10570#2      ------------------------------------------------------------
consensus_10570#1      ------------------------------------------------------------
                                                                                   

consensus_10570#0      TTATGTCTGCAACACCAGATGAAAGCCCAGTTGATATTGAAGATCCATGAATTATGGAAT 180
consensus_10570#2      ------------------------------------------------------------
consensus_10570#1      ------------------------------------------------------------
                                                                                   

consensus_10570#0      GTGACTGAACAATTTGTTGCGGCATAACATTTTGTGAAGAACGAATTGTTGGGGGCATAA 240
consensus_10570#2      ------------------------------------------------------------
consensus_10570#1      ------------------------------------------------------------
                                                                                   

consensus_10570#0      TATTAGGAGGGATAGGTGGTACCAATTGTTTTGGACAACTATTTCGTAACAGAAAGTCAG 300
consensus_10570#2      -----------------GGTACCAATTGTTTTGGACAACTATTTCGTAACAGAAAGTCAG 43
consensus_10570#1      ----------------------------TTTT----ACTTTCTTCATAACAAATGGACGT 28
                                                   ****    *  *  *** ***** *  * *  

consensus_10570#0      CGCAATCATAATTTTTAGAACAATGAGCGTAATAGAATGCATTTCTTCCTTCATGATCTG 360
consensus_10570#2      CGCAATCATAATTTTTAGAACAATGAGCGTGATAGAATGCATTTCTTCCTTCATGATCTG 103
consensus_10570#1      AACTTCTTTAACC--GAGAGAATTCTTTGTGGTTGTAC-CTTTGCTAACTGAACTGTTTC 85
                         *     ***     ***  * *    **  * * *  * ** **  **  *   * * 

consensus_10570#0      TCACA-----GCTGGATCACCATTGTACCATAAAAGCAACTGTAAATAAACTAGATTTCC 415
consensus_10570#2      TCACA-----GCTGGATCACCATTGTACCATAAAAGCAACTGTAAATAAACTAGATTTCC 158
consensus_10570#1      TCCCATTGTTATTATTTTACTATCATACACTAATTTCTGTTCTTTATTGTTCCCTTTTTT 145
                       ** **       *   * ** **  ***  ***   *   * *  **        ***  

consensus_10570#0      GAGAGTAGCAGC-AATGTGAATAGCTGCTCGTGGATCTTGAAGTGAATAAGCCGCATTGA 474
consensus_10570#2      GAGAGTAGCAGC-AATGTGAATAGCTGCTCGTGGATCTTGAAGTGAATAAGCCGCATTGA 217
consensus_10570#1      CTTATAAGCATTTAATATCCTCCATCTCTTCAAATCCTCATAGTTATTGA--TATCTACA 203
                          *  ****   *** *         **       **   *** * * *      *  *

consensus_10570#0      CTGTTTCAGGTGTAGCCAAAGCTAGACAAAGTATAACTTGACGTGTATCTTGACGAGCTA 534
consensus_10570#2      CTGTTTCAGGTGTAGCCAAAGCTAGACAAAGTATAACTTGACGTGTATCTTGACGAGCTA 277
consensus_10570#1      CACACCCGCATATACACAATACAAAACATTGATTAACT-GAAGTACAAATTCGGGACCTA 262
                       *     *   * **  ***  * * ***  *  ***** ** **  *  **   ** ***

consensus_10570#0      ----TTGCATCAATCAACTGTCGTTGAAGTGGAGCATCAGGATAGGGTA-ATGGAGGCAG 589
consensus_10570#2      ----TTGCATCAATCAACTGTCGTTGAAGTGGAGCATCAGGATAGGGTA-ATGGAGGCAG 332
consensus_10570#1      CAAGTTGTACATATAAAAAAACATCAACCTTACCTGGTGCACCACAATCTGCACAAACAT 322
                           *** *   ** **    * *  *  *             *   *      *  ** 

consensus_10570#0      AAATTCTCGATGTTGATATTTAGCTCGAATCCAAACTTCTTTTTCCTCTCG-TGAACTTG 648
consensus_10570#2      AAATTCTCGATGTTGATATTTAGCTCGAATCCAAACTTTCTTTTCCTCTCG-TGAACTTG 391
consensus_10570#1      CATTTCCAGCTGCAGATCTTATGCTTTGAATTAAATGCTCTGTAACAGCCAATTCATTAG 382
                        * ***  * **  *** **  ***   *   ***     * *  *   *  *  * * *

consensus_10570#0      AAGGATCTGGTTTTCGTAGATTGCCAGCATTTACAGGCGCAGCAGCTTCCCAAACAGAAT 708
consensus_10570#2      AAGGATCTGGTTTTCGTAGA---------------------------------------- 411
consensus_10570#1      CATCACCTGCACCACAACGACTTGAATTAAGACTGTTAGAATCCCCATGTCGACCACTCC 442
                        *  * ***     *   **                                        

consensus_10570#0      TAGCTAATGTATTACCAATAGCGCTCATTACACTGACAGATTCAGTAGACCATTCATCTA 768
consensus_10570#2      -------------------------------------------------CCATTCATCTA 422
consensus_10570#1      CTGAACCTAATCCACTAACATTGGAAAGGTGGTTGGAACCGCTGGTG--CCGCCAACTCC 500
                                                                        **    *    

consensus_10570#0      AGT-GTAAAGAACGTATGCGTGA-AATATGTGTTCCAAGTTGTCGATGTATACCACTGCA 826
consensus_10570#2      AGT-GTAAAGAACGTATGCGTGA-AATATGTGTTCCAAGTTGTCGATGTATACCACTGCA 480
consensus_10570#1      TGTAGTACACCCAGTAGCAGCAACAGCACGAGTACCTN-TAGATGATTCATTTAATTGAA 559
                        ** *** *    ***   *  * *  * * ** **   * *  ***  **   * ** *

consensus_10570#0      ACTAATACAAACCATAGCGCCTAAATTAAGACTTGCCCAATCTGGTTCTGGTGCACCACA 886
consensus_10570#2      ACTAATACAAACCATAGCGCCTAAATTAAGACTTG------------------------- 515
consensus_10570#1      GCCTTGTCATA--ATAGCACGTTCAATATG------------------------------ 587
                        *     ** *  ***** * *  * ** *                              

consensus_10570#0      ATCTGCACAAAAATCATTTCCAGCTGCAGATCTTATGCTTTGAATTAAATGCTCTGTAAC 946
consensus_10570#2      ------------------------------------------------------------
consensus_10570#1      ------------------------------------------------------------
                                                                                   

consensus_10570#0      AGCCAATTCATTAGCATCACCTGCACCACAACGACTTGAATTAAGACTGTTAGAATCCCC 1006
consensus_10570#2      ------------------------------------------------------------
consensus_10570#1      ------------------------------------------------------------
                                                                                   

consensus_10570#0      ATGTCGACCACTCCCTGAACCTAATCCACTAACATTGGAAAGGTGGTTGGAACCGCTGGT 1066
consensus_10570#2      ------------------------------------------------------------
consensus_10570#1      ------------------------------------------------------------
                                                                                   

consensus_10570#0      GCCGCCAACTCCTGTAGTACACCCAGTAGCAGCAATAGCACGAGTACGTTTAGATGATTC 1126
consensus_10570#2      ------------------------------------------------------------
consensus_10570#1      ------------------------------------------------------------
                                                                                   

consensus_10570#0      ATTTAATTGAAGCCTTGTCATAATAGCACGTTCAATATGCATAACCCATTCATCTCGTTC 1186
consensus_10570#2      ------------------------------------------------------------
consensus_10570#1      ------------------------------------------------------------
                                                                                   

consensus_10570#0      ATCTGGACCAGTCGCTTCAAAATGCCATTGACGATCCATTGATATCAATTGAAATTCATA 1246
consensus_10570#2      ------------------------------------------------------------
consensus_10570#1      ------------------------------------------------------------
                                                                                   

consensus_10570#0      ACCTTCGGAATCTGAACCATCAGCATTATTACTCTTTGGATTGGATTTAATACGTCTATG 1306
consensus_10570#2      ------------------------------------------------------------
consensus_10570#1      ------------------------------------------------------------
                                                                                   

consensus_10570#0      ACGTTTTTTCACTGATGATGAATCTTTGCCTCCTGATGCTGAATTATCATTAAGAGGGGC 1366
consensus_10570#2      ------------------------------------------------------------
consensus_10570#1      ------------------------------------------------------------
                                                                                   

consensus_10570#0      TGAATTTTCAGTAGGATTCTTAACATCTACGCCAGTTGACCGACGATCTGCACCACCATC 1426
consensus_10570#2      ------------------------------------------------------------
consensus_10570#1      ------------------------------------------------------------
                                                                                   

consensus_10570#0      ATTTAATTGACTTCGCAACAGTCCATTACTTGTTATACGACTTCCAACTTGACGAAATGC 1486
consensus_10570#2      ------------------------------------------------------------
consensus_10570#1      ------------------------------------------------------------
                                                                                   

consensus_10570#0      TACACCAGGAATTTTGACGGTTGTTCTACTTAAGTCAATTTCTTTACCGTGTGAATTATC 1546
consensus_10570#2      ------------------------------------------------------------
consensus_10570#1      ------------------------------------------------------------
                                                                                   

consensus_10570#0      CATATA 1552
consensus_10570#2      ------
consensus_10570#1      ------