These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10571#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 338 fasta sequence [CCAAGCAAGTACAAATGTAGCTGATGCATGAGTTCCAACTTGATAGACTTGTTCACCTGTTTGCACATGGCCAATATCAATGAAATGATCTTCGCTAGCTGCAGCGATTAACTTGCCATCATACGAGAATCCCAAAGTACGTACTGGCCATTCTAGGCGAGATAATGTACGTAGACAAACAAATTCATCCGCGTCCCAAATGGACACTAAAGCATCTGCACTACCAACAGCAAATTGATGACCTGTTGGTGAAAATTGCAGACACATTGCATTGACTGGGTGAGCTTGGATACTTGCTTCACGTTTCATGTCACCCGGTTTCCCACTGTAGACTAATA] [+] EMBL CD071022 [CCAAGCAAGTACAAATGTAGCTGATGCATGAGTTCCAACTTGATAGACTTGTTCACCTGTTTGCACATGGCCAATATCAATGAAATGATCTTCGCTAGCTGCAGCGATTAACTTGCCATCATACGAGAATCCCAAAGTACGTACTGGCCATTCTAGGCGAGATAATGTACGTAGACAAACAAATTCATCCGCGTCCCAAATGGACACTAAAGCATCTGCACTACCAACAGCAAATTGATGACCTGTTGGTGAAAATTGCAGACACATTGCATTGACTGGGTGAGCTTGGATACTTGCTTCACGTTTCATGTCACCCGGTTTCCCACTGTAGACTAAT ] [+] EMBL CD071009 [CCAAGCAAGTACAAATGTAGCTGATGCATGAGTTCCAACTTGATAGACTTGTTCACCTGTTTGCACATGGCCAATATCAATGAAATGATCTTCGCTAGCTGCAGCGATTAACTTGCCATCATACGAGAATCCCAAAGTACGTACTGGCCATTCTAGGCGAGATAATGTACGTAGACAAACAAATTCATCCGCGTCCCAAATGGACACTAAAGCATCTGCACTACCAACAGCAAATTGATGACCTGTTGGTGAAAATTGCAGACACATTGCATTGACTGGGTGAGCTTGGATACTTGCTTCACGTTTCATGTCACCCGGTTTCCCACTGTAGACTAAT ] [+] EMBL CD071010 [CCAAGCAAGTACAAATGTAGCTGATGCATGAGTTCCAACTTGATAGACTTGTTCACCTGTTTGCACATGGCCAATATCAATGAAATGATCTTCGCTAGCTGCAGCGATTAACTTGCCATCATACGAGAATCCCAAAGTACGTACTGGCCATTCTAGGCGAGATAATGTACGTAGACAAACAAATTCATCCGCGTCCCAAATGGACACTAAAGCATCTGCACTACCAACAGCAAATTGATGACCTGTTGGTGAAAATTGCAGACACATTGCATTGACTGGGTGAGCTTGGATACTTGCTTCACGTTTCATGTCACCCGGTTTCCCACTGTAGACTAAT ] [+] EMBL CD070970 [CCAAGCAAGTACAAATGTAGCTGATGCATGAGTTCCAACTTGATAGACTTGTTCACCTGTTTGCACATGGCCAATATCAATGAGATGATCTTCGCTAGCTGCAGCGATTAACTTGCCATCATACGAGAATCCCAAAGTACGTACTGGCCATTCTAGGCGAGATAATGTACGTAGACAAACAAATTCATCCGCGTCCCAAAT GACACTAAAGCATCTGCACTACCAACAGCAAATTGATGACCTGTTGGTGAAAATTGCAGACACATTGCATTGACTGGGTGAGCTTGGATACTTGCTTCACGTTTCATGTCACCCGGTTTCCCACTGTAGACTAAT ] [+] EMBL CD071014 [CCAAGCAAGTACAAATGTAGCTGATGCATGAGTTCCAACTTGATAGACTTGTTCACCTGTTTGCACATGGCCAATATCAATGAAATGATCTTCGCTAGCTGCAGCGATTAACTTGCCATCATACGAGAATCCCAAAGTACGTACTGTCCATTCTAGGCGAGATAATGTACGTAGACAAA ] [+] EMBL CD070990 [CCAAGCAAGTACAAATGTAGCTGATGCATGAGTTCCAACTTGATAGACTTGTTCACCTGTTTGCACATGGCCAATATCAATGAAATGATCTTCGCTAGCTGCAGCGATTAACTTGCCATCATACGAGAATCCCAAAGTACGTACTGGCCATTCTAGGCGAGATAATGTACGTAGACAAACAAATTCATCCGCGTCCCAAATGGACACTAAAGCATCTGCACTACCAACAGCAAATTGATGACCTGTTGGTGAAAATTGCAGACACATTGCATTGACTGCGTGAGCTTGGATACTTGCTTCACGTTTCATGTCACCCGGTTTCCCACTGTAGACTAAT ] [+] EMBL CD071004 [CCAAGCAAGTACAAATGTAGCTGATGCATGAGTTCCAACTTGATAGACTTGTTCACCTGTTTGCACATGGCCAATATCAATGAAATGATCTTCGCTAGCTGCAGCGATTAACTTGCCATCATACGAGAATCCCAAAGTACGTACTGGCCATTCTAGGCGAGATAATGTACGTAGACAAACAAATTCATCCGCGTCCCGAATGGACACTAAAGCATCTGCACTACCAACAGCAAATTGATGACCTGTTGGTGAAAATTGCAGACACATTGCATTGACTGGGTGAGCTTGGATACTTGCTTCACGTTTCATGTCACCCGGTTTCCCACTGTAGACTAAT ] [+] EMBL CD071016 [CCAAGCAAGTACAAATGTAGCTGATGCATGAGTTCCAACTTGATAGACTTGTTCACCTGTTTGCACATGGCCAATATCAATGAAATGATCTTCGCTAGCCGCAGCGATTAACTTGCCATCATACGAGAATCCCAAAGTACGTACTGGCCATTCTAGGCGAGATAATGTACGTAGACAAACAAATTCATCCGCGTCCCAAATGGACACTAAAGCATCTGCACTACCAACAGCAAATTGATGACCTGTTGGTGAAAATTGCAGACACATTGCATTGACTGGGTGAGCTTGGATACTTGCTTCACGTTTCATGTCACCCGGTTTCCCACTGTAGACTAAT ] [+] EMBL CD070963 [CCAAGCAAGTACAAATGTAGCTGATGCATGAGTTCCAACTTGATAGACTTGTTCACCTGTTTGCACATGGCCAATATCAATGAAATGATCTTCGCTAGCTGCAGCGATTAACTTGCCATCATACGAGAATCCCAAAGTACGTACTGGCCATTCTAGGCGAGATAATGTACGTAGACAAACAAATTCATCCGCGTCCCAAATGGACACTAAAGCATCTGCACTACCAACAGCAAATTGATGACCTGTTGGTGAAAATTGCAGACACATTGCATTGACTGGGTGAGCTTGGATACTTGCTTCACGTTTCATGTCACCCGGTTTCCCACTGTAGACTAAT ] [+] EMBL CD071002 [CCAAGCAAGTACAAATGTAGCTGATGCATGAGTTCCAACTTGATAGACTTGTTCACCTGTTTGCACATGGCCAATATCAATGAAATGATCTTCGCTAGCTGCAGCGATTAACTTGCCATCATACGAGAATCCCAAAGTACGTACTGGCCATTCTAGGCGAGATAATGTACGTAGACAAACAAATTCATCCGCGTCCCAAATGGACACTAAAGCATCTGCACTACCAACAGCAAATTGATGACCTGTTGGTGAAAATTGCAGACACATTGCATTGACTGGGTGAGCTTGGATACTTGCTTCACGTTTCATGTCACCCGGTTTCCCACTGTAGACTAAT ] [-] EMBL CD070942 [ CAAGCAAGTACAAATGTAGCTGATGCATGAGTTCCAACTTGATAGACTTGTTCACCTGTTTGCACATGGCCAATATCAATGAAATGATCTTCGCTAGCTGCAGCGATTAACTTGCCATCATACGAGAATCCCAAAGTACGTACTGGCCATTCTAGGCGAGATAATGTACGTAGACAAACAAATTCATCCGCGTCCCAAATGGACACTAAAGCATCTGCACTACCAACAGCAAATTGATGACCTGTTGGTGAAAATTGCAGACACATTGCATTGACTGGGTGAGCTTGGATACTTGCTTCACGTTTCATGTCACCCGGTTTCCCACTGTAGACTAATA] [-] EMBL CD070969 [ CAAGCAAGTACAAATGTAGCTGATGCATGAGTTCCAACCTGATAGACTTGTTCACCTGTTTGCACATGGCCAATATCAATGAAATGATCTTCGCTAGCTGCAGCGATTAACTTGCCATCATACGAGAATCCCAAAGTACGTACTGGCCATTCTAGGCGAGATAATGTACGTAGACAAACAAATTCATCCGCGTCCCAAATGGACACTAAAGCATCTGCACTACCAACAGCAAATTGATGACCTGTTGGTGAAAATTGCAGACACATTGCATTGACTGGGTGAGCTTGGATACTTGCTTCACGTTTCATGTCACCCGGTTTCCCACTGTAGACAAATA] [-] EMBL CD070947 [ CAAGCAAGTACAAATGTAGCTGATGCATGAGTTCCAACTTGATAGACATGTTCACCTGTTTGCACATGGCCAATATCAATGAAATGATCTTCGCTAGCTGCAGCGATTAACTTGCCATCATACGAGAATCCCAAAGTACGTACTGGCCATTCTAGGCGAGATAATGTACGTAGACAAACAAATTCATCCGTGTCCCAAATGGACACTAAAGCATCTGCACTACCAACAGCAAATTGATGACCTGTTGGTGAAAATTGCAGACACATTGCATTGACTGGGTGAGCTTGGATACTTGCTTCACGTTTCATGTCACCCGGTTTCCCACTGTAGACTAATA] [-] EMBL CD070965 [ CAAGCAAGTACAAATGTAGCTGATGCATGAGTTCCAACTTGATAGACTTGTTCACCTGTTTGCACATGGCCAATATCAATGAAATGATCTTCGCTAGCTGCAGCGATTAACTTGCCATCATACGAGAATCCCAAAGTACGTACTGGCCATTCTAGGCGAGATAATGTACGTAGACAAACAAATTCATCCGCGTCCCAAATGGACACCAAAGCATCTGCACTACCAACAGCAAATTGATGACCTGTTGGTGAAAATTGCAGACACATTGCATTGACTGGGTGAGCTTGGATACTTGCTTCACGTTTCATGTCACCCGGTTTCCCACTGTAGACTAATA] [-] EMBL CD070980 [ CAAGCAAGTACAAATGTAGCTGATGCATGAGTTCCAACTTGATAGACTTGTTCACCTGTTTGCACATGGCCAATATCAATGAAATGATCTTCGCTAGCTGCAGCGATTAACTTGCCATCATACGAGAATCCCAAAGTACGTACTGGCCATTCTAGGCGAGATAATGTACGTAGACAAACAAATTCATCCGCGTCCCAAATGGACACTAAAGCATCTGCACTACCAACAGCAAATTGATGACCTGTTGGTGAAAATTGCAGACACATTGCATTGACTGGGTGAGCTTGGATACTTGCTTCACGTTTCATGTCACCCGGTTTCCCACTGTAGACTAATA] [-] EMBL CD070991 [ CAAGCAAGTACAAATGTAGCTGATGCATGAGTTCCAACTTGATAGACTTGTTCACCTGTTTGCACATGGCCAATATCAATGAAATGATCTTCGCTAGCTGCAGCGATTAACTTGCCATCATACGAGAATCCCAAAGTACGTACTGGCCATTCTAGGCGAGATAATGTACGTAGACAAACAAATTCATCCGCGTCCCAAATGGACACTAAAGCATCTGCACTACCAACAGCAAATTGATGACCTGTTGGTGAAAATTGCAGACACATTGCATTGACTGGGTGAGCTTGGATACTTGCTTCACGTTTCATGTCACCCGGTTTCCCACTGTAGACTAATA] [-] EMBL CD070999 [ CAAGCAAGTACAAATGTAGCTGATGCATGAGTTCCAACTTGATAGACTTGTTCACCTGTTTGCACATGGCCAATATCAATGAAATGATCTTCGCTAGCTGCAGCGATTAACTTGCCATCATACGAGAATCCCAAAGTACGTACTGGCCATTCTAGGCGAGATAATGTACGTAGACAAACAAATTCATCCGCGTCCCAAATGGACACTAAAGCATCTGCACTACCAACAGCAAATTGATGACCTGTTGGTGAAAATTGCAGACACATTGCATTGACTGGGTGAGCTTGGATACTTGCTTCACGTTTCATGTCACCCGGTTTCCCACTGTAGACTAATA] [-] EMBL CD070960 [ CAAGCAAGTACAAATGTAGCTGATGCATGAGTTCCAACTTGATAGACTTGTTCACCTGTTTGCACATGGCCAATATCAATGAAATGATCTTCGCTAGCTGCAGCGATTAACTTGCCATCATACGAGAATCCCAAAGTACGTACTGGCCATTCTAGGCGAGATAATGTACGTAGACAAACAAATTCATCCGCGTCCCAAATGGACACTAAAGCATCTGCACTACCAACAGCAAATTGATGACCTGTTGGTGAAAATTGCAGACACATTGCATTGACTGGGTGAGCTTGGATACTTGCTTCACGTTTCATGTCACCCGGTTTCCCACTGTAGACTAATA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||