Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10572 cluster # 10572       Sequences # 18       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10572#0 length = 797 sequences # 9  
consensus_10572#1 length = 497 sequences # 5  
consensus_10572#2 length = 468 sequences # 4  

consensusID : consensus_10572#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 797
fasta sequence
                              [GAGGCCAANAATTTGGCACGAGGCCGAGTTGTAATTCGTCAGCAAGCAACAACTGAGAAAGGAAATAAGGCGGCAAGAGAGATCATTGACGACATGCGCCTGATCGTTAAGGAACTCCTACAGCTTTATTTGCGAAATACAAATGGTCGGTTCCCTACCCGTATGATATTCTACCGCGATGGAGTTTCAGAAGGACAATTCGAAAATGTTCTTG-TGAAGAGCTTGCAGCCATCCAGAGGGCATGCTCAGATGTGCGTCCTGGTGAAGAGCCGGCTATAACTTATATCGTTGTCC-AAAAACGCCATCAT-ATTCGGTTCAAACCCTCTGATCCCAGAGCGCGAAACGTGGAACCTGGGACGGTTGTTGACACAGAAATAACTCATCCAAGAGAATTCGACTTTTATCTGTGCTCTCAAGACGGAATTCAGGGAACGTCCAAACCTGCCCATTACCATGTGTTATATGATGACAGTAACTGGTCGTCCGATGCTCTACAAATGTTCACTTATCATTTATGCTACACTTATATGAGATGCTCTCGTAGCGTATCTTATCCAGCACCAACCTATTATTCCCATTTGGCTGCTTTTCGTGCTAGAGATTGGTTATCGGGAGTAGACCAACCAGCTGTTTTATTGGATAGTGGTCGCTTCAAA-GTTCATGCTTCACAGGTTGACGGGATGTTTTATCTATAGAGTTACACAGATTTTTTCATAACATATCTATATAAATAAACTATATACTTTTCTAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTCTCTCTCTCTCTCTC]

[+] EMBL CD081396             [GAGGCCAANAATTTGGCACGAGGCCGAGTTGTAATTCGTCAGCAAGCAACAACTGAGAAAGGAAATAAGGCGGCAAGAGAGATCATTGACGACATGCGCCTGATCGTTAAGGAACTCCTACAGCTTTATTTGCGAAATACAAATGGTCGGTTCCCTACCCGTATGATATTCTACCGCGATGGAGTTTCAGAAGGACAATTCGAAAATGTTCTTGTTGAAGAGCTTGCAGCCATCCAGAGGGCATGCTCAGATGTGCGTCCTGGTGAAGAGCCGGCTATAACTTATATCGTTGTCC AAAAACGCCATCAT ATTCGGTTCAAACCCTCTGATCCCAGAGCGCGAAACGTGGAACCTGGGACGGTTGTTGACACAGAAATAACTCATCCAAGAGAATTCGACTTTTATCTGTGCTCTCAAGACGGAATTCAGGGAACGTCCAAACCTGCCCATTACCATGTGTTATATGATGACAGTAACTGGTCGTCCGATGCTCTACAAATGTTCACTTATCATTTATGCTACACTTATATGAGATGCTCTCGTAGCGTATCTTATCCAGCACCAACCTATTATTCCCATTTGGCTGCTTTTCGTGCTAGAGATTGGTTATCGGGAGTAGACCAACCAGCTGTTTTATTGGATAGTGGTCGCTTC AA GTTCATGCTTCACAGGTTGACGGGATGTTTTATCTATAGAGTTACACAGATTTTTTCATTACATATCTATATAAAATAACTAT                                                          ]
[-] EMBL BF936479             [                                                                                                                                                   CGGTTCCCTACCCGTATGATATTCTACCGCGA AGAGTTTCAGAAGGACAATTCGAAAATGTTCTTG TGAAGAGCTTGCAGCCATCCAGAGGGCATGCTCAGATGTGCGTCCTGGTGAAGAGCCGGCTATAACTTATATCGTTGTCC AAAAACGCCATCATAATTCGGTTCAAACCCTCTGATCCCAGAGCGCGAAACGTGGAACCTGGGACGGTTGTTGACACAGAAATAACTCATCCAAGAGAATTCGACTTTTATCTGTGCTCTCAAGACGGAATTCAGGGAACGTCCAAACCTGCCCATTACCATGTGTTATATGATGACAGTAACTGGTCGTCCGATGCTCTACAAATGTTCACTTATCATTTATGCTACACTTATATGAGATGCTCTCGTAGCGTATCTTATCCAGCACCAACCTATTATTCCCATTTGGCTGCTTTTCGTGCTAGAGATTGGTTATCGGGAGTAGACCAACCAGCTGTTTTATTGGATAGTGGTCGCTTCAAA GTTCATGCTTCACAGGTTGACGGGATGTTTTATCTATAGAGTTACACAGATTTTTTCATAACATATCTATATAAATAAACTATATACTTTTCTAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTCTCTCTCTCTCTCTC]
[-] EMBL BF936375             [                                                                                                                                                                                  ATGGAGTTTCAGAAGGACAATTCGAAAATGTTCTTG TGAAGAGCTTGCAGCCATCCAGAGGGCATGCTCAGATGTGCGTCCTGGTGAAGAGCCGGCTATAACTTATATCGTTGTCC AAAAACGCCATCAT ATTCGGTTCAAACCCTCTGATCCCAGAGCGCGAAACGTGGAACCTGGGACGGTTGTTGACACAGAAATAACTCATCCAAGAGAATTCGACTTTTATCTGTGCTCTCAAGACGGAATTCAGGGAACGTCCAAACCTGCCCATTACCATGTGTTATATGATGACAGTAACTGGTCGTCCGATGCTCTACAAATGTTCACTTATCATTTATGCTACACTTATATGAGATGCTCTCGTAGCGTATCTTATCCAGCACCAACCTATTATTCCCATTTGGCTGCTTTTCGTGCTAGAGATTGGTTATCGGGAGTAGACCAACCAGCTGTTTTATTGGATAGTGGTCGCTTCAAA GTTCATGCTTCACAGGTTGACGGGATGTTTTATCTATAGAGTTACACAGATTTTTTCATAACATATCTATATAAATAAACT TATA                                                       ]
[-] EMBL CD075227             [                                                                                                                                                                                           CAGAAGGACAATTCGANAATGTTCTTG TGAAGAGCTGNCAGCCATCCAGAGGGCATGCTCAGATGTGCGTCCTGGTGAAGAGCCGGCTATAACTTATATCGTTGTCC AAAAACGCCATCAT ATTCGGTTCAAACCCTCTGATCCCAGAGCGCGAAACGTGGAACCTGGGACGGTTGTTGACACAGAAATAACTCATCCAAGAGAATTCGACTTTTATCTGTGCTCTCAAGACGGAATTCAGGGAACGTCCAAACCTGCCCATTACCATGTGTTATATGATGACAGTAACTGGTCGTCCGATGCTCTACAAATGTTCACTTATCATTTATGCTACACTTATATGAGATGCTCTCGTAGCGTATCTTATCCAGCACCAACCTATTATTCCCATTTGGCTGCTTTTCGTGCTAGAGATTGGTTATCGGGAGTAGACCAACCAGCTGTTTTATTGGATAGTGGTCGCTTCAAA GTTCATGCTTCACAGGTTGACGGGATGTTTTATCTATAGAGTTACACAGATTTTTTCATAACATATCTATATAAATAAACTATA                                                         ]
[-] EMBL AI395396             [                                                                                                                                                                                                                                                                                           ATATCGTTGACCAAAAAACGCCATCAT ATTCGGTTCAAACCCTCTGATCCCAGAGCGCGAAACGTGGAACCTGGGACGGTTGTTGACACAGAAATAACTCATCCAAGAGAATTCGACTTTTATCTGTGCTCTCAAGACGGAATTCAGGGAACGTCCAAACCTGCCCATTACCATGTGTTATATGATGACAGTAACTGGTCGTCCGATGCTCTACAAATGTTCACTTATCATTTATGCTACACTTATATGAGATGCTCTCGTAGCGTATCTTATCCAGCACCAACCTATTATTCCCATTTGGCTGCTTTTCGTGCTAGAGATTGGTTATCGGGAGTAGACCAACCAGCTGTTTTATTGGATAGTGGTCGCTTCAAA GTTCATGCTTCACAGGTTGACGGGATGTTTTATCTATAGAGTTACACAGATTTTTTCATAACATATCTATATAAATAAACTATATACTTTTCTAAAAAAAAAAAAAAAAAAa                             ]
[-] EMBL AI395242             [                                                                                                                                                                                                                                                                                                                                                         ACGTNGAACCTGGGACGGTTGTTGACACAGAAATAACTCATCCAAGAGAA TCGACTTTTATCTGTGCTCTCAAGACGGAATTCAGGGAACGTCCAAACCTGCCCATTACCATGTGTTATATGATGACAGTAACTGGTCGTCCGATGCTCTACAAATGTTCACTTATCATTTATGCTACACTTATATGAGATGCTCTCGTAGCGTATCTTATCCAGCACCAACCTATTATTCCCATTTGGCTGCTTTTCGTGCTAGAGATTGGTTATCGGGAGTAGACCAACCAGCTGTTTTATTGGATAGTGGTCGCTTCAAA GTTCATGCTTCACAGGTTGACGGGATGTTTTATCTATAGAGTTACACAGATTTTTTCATAACATATCTATATAAATAAACTATATACTTTTCTAAAAAAAAAAAAAAAA                                ]
[-] EMBL SMW728               [                                                                                                                                                                                                                                                                                                                                                                        CGGTTG TGACACAGAAATAACTCANCCAAGAGAATCCGACNTTTATCTGTGCTCTCAAGACGGAATTCAGGGAACGGCCAAACCTGCCCATTACCATGTGTTATATGATGACAGTAACTGGTCGTCCGATGCTCNACAAATGTTCACNTATCATTTATGCTAAACTTATATGAGATGCTCTCGTAGCGTATCTTATCCAGCACCAACCTATTATTCCNATTTGGCTGCTTTTCGTGCTAAAGATTGGTTATCGGGAGTAGACCAACCAGCTGTNNTATTGGATAGTGGTCGCTTCAAA GTTCATCCTTCACAGGTTGACGGGATGTGTTACCTA                                                                                                         ]
[-] EMBL SMT14541             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGCTCTACAAATGTTCACTTATCATTTATGCTACACTTATATGAGATGCTCCCGTAGCGTATCTTATCCAGCACCAACCTATTANTCCCATTTGGCTGCTTTTCGTGCTAGAGATTGGTTATCGGGAGTAGACCAACCAGCTGTTTTANTGGATAGTGGNCGCTTCAAA GNTCATGCNTCACAGGTTGACGGGNTGTTTTATCTATAGAG TACACAGATTTTTTCATAACATATCTATATNAATAAACTATA                                                         ]
[-] EMBL SMT14627             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCTACAAATGTTCACTTATCATTTATGCTACACTTATATGAGATGCTCTCGTANCGTATCTTATCCAGCACCAACCTATTATTCCCATTTGGCTGCTTTTCGTGCTANAGATTGGTTATCGGGAGTAGACCAACCAGCTGTTTTATTGGATAGNGGTCGCTTCAAAGGTTCATGCTTCACAGGTTGACGGGATG GTTATCTATANAGGTACACAGATTTTTTCATAACATATCTATATAAATAAACTATA                                                         ]


>consensus_10572#0 GAGGCCAANAATTTGGCACGAGGCCGAGTTGTAATTCGTCAGCAAGCAACAACTGAGAAA GGAAATAAGGCGGCAAGAGAGATCATTGACGACATGCGCCTGATCGTTAAGGAACTCCTA CAGCTTTATTTGCGAAATACAAATGGTCGGTTCCCTACCCGTATGATATTCTACCGCGAT GGAGTTTCAGAAGGACAATTCGAAAATGTTCTTGTGAAGAGCTTGCAGCCATCCAGAGGG CATGCTCAGATGTGCGTCCTGGTGAAGAGCCGGCTATAACTTATATCGTTGTCCAAAAAC GCCATCATATTCGGTTCAAACCCTCTGATCCCAGAGCGCGAAACGTGGAACCTGGGACGG TTGTTGACACAGAAATAACTCATCCAAGAGAATTCGACTTTTATCTGTGCTCTCAAGACG GAATTCAGGGAACGTCCAAACCTGCCCATTACCATGTGTTATATGATGACAGTAACTGGT CGTCCGATGCTCTACAAATGTTCACTTATCATTTATGCTACACTTATATGAGATGCTCTC GTAGCGTATCTTATCCAGCACCAACCTATTATTCCCATTTGGCTGCTTTTCGTGCTAGAG ATTGGTTATCGGGAGTAGACCAACCAGCTGTTTTATTGGATAGTGGTCGCTTCAAAGTTC ATGCTTCACAGGTTGACGGGATGTTTTATCTATAGAGTTACACAGATTTTTTCATAACAT ATCTATATAAATAAACTATATACTTTTCTAAAAAAAAAAAAAAAAAACTCGAGACTAGTT CTCTCTCTCTCTCTCTC



consensusID : consensus_10572#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 497
fasta sequence
                              [TCTCCAGATAGGCATTCGCACACAATGTGTACGGAGTCGCACCCTC-GATAAACCAAACGTCTTCCCAAAC-CTTTTGCTAAAAATCAATGGGAAGCTTGGTGGTGTCAACTGGCAGATTCCAGATCTCATCAAAAACAGCGATGAGCTCATAATGGTCTTTGGAGCAGACGTTACTCATCCAGCTCAAACTCAGCAAGTCCGCAAGTCGGTTGCGGCGGTTCTTGGTAGTGTTTCGCCTGATCTTATGAGGTACGGAGTTGTAATTCGTCAGCAAGCAACAACTGAGAAAGGAAATAAGGCGGCAAGAGAGATCATTGACGACATGCGCCTGATCGTTAA-GGAACTCCTACAGCTTTATTTGCGAAATACAAATGGTCGGTTCCCTACCCGTATGATATTCTACCGCGATGGAGTTTCAGAAGGACAATTCGAAAATGTTCTTGTTGAAGAGCTTGCAGCCATCCAGAGGGCATGCTCAGATGTGCGTCCTGGTGAAG]

[+] EMBL SMT14542             [TCTCCAGATAGGCATTCGCACACAATGTGTACGGAGTCGCACCCTC GATAAACCAAACGTCTTCCCAAAC CTTTTGCTAAAAATCAATGGGAAGCTTGGTGGTGTCAACTGGCAGATTCCAGATCTCATCAAAAACAGCGATGAGCTCATAATGGTCTTTGGAGCAGACGTTACTCATCCAGCTCAAACTCAGCAAGTCCGCAAGTCGGTTGCGGCGGTTCTTGGTAGTGTTTCGCCTGATCTTATGAGGTACGNAGTTGTAATTCGTCAGCAAGCAACAACTGTGAAAGGAANTAAGGCGGCAAGAGAGATCATTGACGGCATGCGNCTGNTCGTTAAGGGAACTCCTACAGCTT                                                                                                                                              ]
[+] EMBL CD083576             [           GCATTCGCACACAATGTGTACGGAGTCGCACCCTCTGATAAACCAAACGTCTTCCCAAACACTTTTGCTAAAAATCAATGGGAAGCTTGGTGGTGTCAACTGGCAGATTCCAGATCTCATCAAAAACAGCGATGAGCTCATAATGGTCTTTGGAGCAGACGTTACTCATCCAGCTCAAACTCAGCAAGTCCGCAAGTCGGTTGCGGCGGTTCTTGGTAGTGTTTCGCCTGATCTTATGAGGTACGGAGTTGTAATTCGTCAGCAAGCAACAACTGAGAAAGGAAATAAGGCGGCAAGAGAGATCATTGACGACATGCGCCTGATCGTTAA GGAACTCCTACAGCTTTATTTGCGAAATACAAATGGTCGGTTCCCTACCCGTATGATATTCTACCGCGATGGAGTTTCAGAAGGACAATTCGAAAATGTTCTTGTTGAAGAGCTTGCAGCCATCCAGAGGGCATGCTCAGATGTGCGTCCTGGTGAAG]
[+] EMBL SMW729               [                                                                          TTTGCTAAAAATCAATGGGAAGCTTGGTGGTGTCAACTGGCAGATTCCAGATCTCATCAAAAACAGCGATGAGCTCATAATGGTCTTTGGAGCAGACGTTACTCATCCAGCTCAAACTCAGCAAGTCCGCAAGTCGGTTGCGGCGGTTCTTGGTAGTGTTTCGCCTGATCTTATGAGGTACGGNGTTGTAATTCGTCAGCAAGCAACAACTGAGAAAGGAAATANGGCGGCAAGAGAGATCATTGACGACATGCGCCTGATCGTTAA GGAACTCCTACAGCTTTATTTGCGAAATACAAATGGTCGGTTCCCTACCCGTATGTTATTCTNCCGCGATGGNGTTTCAGAGGNCCAATTCGGAAAT                                                             ]
[+] EMBL CD158795             [                                                                                                                                                                                                                                                                                                      AATAAGGCGGCAAGAGAGATCATTGACGACATGCGCCTGATCGTTAA GGAACTCCTACAGCTTTATTTGCGAAATACAAATGGTCGGTTCCCTACCCGTATGATATTCTACCGCGATGGAGTTTCAGAAGGACAATTCGAAAATGTTCTTGTTGAAGAGCTTGCAGCCATCCAGAGGGCATGCTCAGATGTGCGT          ]
[-] EMBL CD158718             [                                                                                                                                                                                                                                                                                                       ATAAGGCGGCAAGAGAGATCATTGACGACATGCGCCTGATCGTTAA GGAACTCCTACAGCTTTATTTGCGAAATACAAATGGTCGGTTCCCTACCCGTATGATATTCTACCGCGATGGAGTTTCAGAAGGACAATTCGAAAATGTTCTTGTTGAAGAGCTTGCAGCCATCCAGAGGGCATGCTCAGATGTGCGTC         ]


>consensus_10572#1 TCTCCAGATAGGCATTCGCACACAATGTGTACGGAGTCGCACCCTCGATAAACCAAACGT CTTCCCAAACCTTTTGCTAAAAATCAATGGGAAGCTTGGTGGTGTCAACTGGCAGATTCC AGATCTCATCAAAAACAGCGATGAGCTCATAATGGTCTTTGGAGCAGACGTTACTCATCC AGCTCAAACTCAGCAAGTCCGCAAGTCGGTTGCGGCGGTTCTTGGTAGTGTTTCGCCTGA TCTTATGAGGTACGGAGTTGTAATTCGTCAGCAAGCAACAACTGAGAAAGGAAATAAGGC GGCAAGAGAGATCATTGACGACATGCGCCTGATCGTTAAGGAACTCCTACAGCTTTATTT GCGAAATACAAATGGTCGGTTCCCTACCCGTATGATATTCTACCGCGATGGAGTTTCAGA AGGACAATTCGAAAATGTTCTTGTTGAAGAGCTTGCAGCCATCCAGAGGGCATGCTCAGA TGTGCGTCCTGGTGAAG



consensusID : consensus_10572#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 468
fasta sequence
                              [CCCGAGGCCAGAATCGGCACGAGGTTTCGCCTGATCTTATGAGGTAC-GAGTTGTAATTCGTCAGCAAGCAACAACTGAGAAAGGAAATAA-GGCGGCAAG-AGAGATCATTGACGACATGCGCCTGATCGTTAAGGAACTCCTACAGCTTTATTTGCGAAATACAAATGGTCGGTTCCCTACCCGTATGATATTCTACCGCGATGGAGTTTCAGAAGGACAATTCGAAAATGTTCTTGTTGAAGAGCTTGCAGCCATCCAGAGGGCATGCTCAGATGTGCGTCCTGGTGAAGAGCCGGCTATAACTTATATCGTTGTCCAAAAACGCCATCATATTCGGTTCAAACCCTCTGATCCCAGAGCGCGAAACGTGGAACCTGGGACGGTTGTTGACACAGAAATAACTCATCCAAGAGAATTCGACTTTTATCTGTGCTCTCAAGACGGAATTCAGGGAACGTCCAAACCTGC]

[+] EMBL CD083881             [CCCGAGGCCAGAATCGGCACGAGGTTTCGCCTGATCTTATGAGGTACGGAGTTGTAATTCGTCAGCAAGCAACAACTGAGAAAGGAAATAA GGCGGCAAG AGAGATCATTGACGACATGCGCCTGATCGTTAAGGAACTCCTACAGCTTTATTTGCGAAATACAAATGGTCGGTTCCCTACCCGTATGATATTCTACCGCGATGGAGTTTCAGAAGGACAATTCGAAAATGTTCTTGTTGAAGAGCTTGCAGCCATCCAGAGGGCATGCTCAGATGTGCGTCCTGGTGAAGAGCCGGCTATAACTTATATCGTTGTCCAAAAACGCCATCATATTCGGTTCAAACCCTCTGATCCCAGAGCGCGAAACGTGGAACCTGGGACGGTTGTTGACACAGAAATAACTCATCCAAGAGAATTCGACTTTTATCTGTGCTCTCAAGACGGAATTCAGGGAACGTCCAAACCTGC]
[+] EMBL CD083876             [                       GTTTCGCCTGATCTTATGAGGTAC GAGTTGTAATTCGTCAGCAAGCAACAACTGAGAAAGGAAATAA GGCGGCAAG AGAGATCATTGACGACATGCGCCTGATCGTTAAGGAACTCCTACAGCTTTATTTGCGAAATACAAATGGTCGGTTCCCTACCCGTATGATATTCTACCGCGATGGAGTTTCAGAAGGACAATTCGAAAATGTTCTTGTTGAAGAGCTTGCAGCCATCCAGAGGGCATGCTCAGATGTGCGTCCTGGTGAAGAGCCGGCTATAACTTATATCGTTGTCCAAAAACGCCATCATATTCGGTTCAAACCCTCTGATCCCAGAGCGCGAAACGTGGAACCTGGGACGGTTGTTGACACAGAAATAACTCATCCAAGAGAATTCGACTTTTATCTGTGCTCTCAAGA                           ]
[+] EMBL CD083908             [                        TTTCGCCTGATCTTATGAGGTAC GAGTTGTAATTCGTCAGCAAGCAACAACTGAGAAAGGAAATAA GGCGGCAAG AGAGATCATTGACGACATGCGCCTGATCGTTAAGGAACTCCTACAGCTTTATTTGCGAAATACAAATGGTCGGTTCCCTACCCGTATGATATTCTACCGCGATGGAGTTTCAGAAGGACAATTCGAAAATGTTCTTGTTGAAGAGCTTGCAGCCATCCAGAGGGCATGCTCAGATGTGCGTCCTGGTGAAGAGCCGGCTATAACTTATATCGTTGTCCAAAAACGCCATCATATTCGGTTCAAACCCTCTGATCCCAGAGCGCGAAACGTGGAACCTGGGACGGTTGTTGACACAGAAATAACTCATCCAAGAGAATTCGACTTTTATCTGTGCTCTCA                              ]
[+] EMBL CD063013             [                                                                                       ATAAGGGCGGCAAGAAGAGATCATTGACGACATGCGCCTGATCGTTAAGGAACTCCTACAGCTTTATTTGCGAAATACAAATGGTCGGTTCCCTACCCGTATGATATTCTACCGCGATGGAGTTTCAGAAGGACAATTCGAAAATGTTCTTGTTGAAGAGCTTGCAGCCATCCAGAGGGCATGCTCAGACGTGCGTCCTGGTGAAGAGCCGGCTATAACTTATATCGTTGTCCAAAAACGCCATCATATTCGG                                                                                                                                   ]


>consensus_10572#2 CCCGAGGCCAGAATCGGCACGAGGTTTCGCCTGATCTTATGAGGTACGAGTTGTAATTCG TCAGCAAGCAACAACTGAGAAAGGAAATAAGGCGGCAAGAGAGATCATTGACGACATGCG CCTGATCGTTAAGGAACTCCTACAGCTTTATTTGCGAAATACAAATGGTCGGTTCCCTAC CCGTATGATATTCTACCGCGATGGAGTTTCAGAAGGACAATTCGAAAATGTTCTTGTTGA AGAGCTTGCAGCCATCCAGAGGGCATGCTCAGATGTGCGTCCTGGTGAAGAGCCGGCTAT AACTTATATCGTTGTCCAAAAACGCCATCATATTCGGTTCAAACCCTCTGATCCCAGAGC GCGAAACGTGGAACCTGGGACGGTTGTTGACACAGAAATAACTCATCCAAGAGAATTCGA CTTTTATCTGTGCTCTCAAGACGGAATTCAGGGAACGTCCAAACCTGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10572#0      ------------------------------------------------------------
consensus_10572#2      ------------------------------------------------------------
consensus_10572#1      TCTCCAGATAGGCATTCGCACACAATGTGTACGGAGTCGCACCCTCGATAAACCAAACGT 60
                                                                                   

consensus_10572#0      ------------------------------------------------------------
consensus_10572#2      ------------------------------------------------------------
consensus_10572#1      CTTCCCAAACCTTTTGCTAAAAATCAATGGGAAGCTTGGTGGTGTCAACTGGCAGATTCC 120
                                                                                   

consensus_10572#0      ------------------------------------------------------------
consensus_10572#2      ------------------------------------------------------------
consensus_10572#1      AGATCTCATCAAAAACAGCGATGAGCTCATAATGGTCTTTGGAGCAGACGTTACTCATCC 180
                                                                                   

consensus_10572#0      ----------------------------------------------GAGGCCAANAATT- 13
consensus_10572#2      --------------------------CCCGAGGCCAGAATCGGCACGAGGTTTCGCCTGA 34
consensus_10572#1      AGCTCAAACTCAGCAAGTCCGCAAGTCGGTTGCGGCGGTTCTTGGTAGTGTTTCGCCTGA 240
                                                                        *       *  

consensus_10572#0      TGGCACGAGGC-CG-AGTTGTAATTCGTCAGCAAGCAACAACTGAGAAAGGAAATAAGGC 71
consensus_10572#2      TCTTATGAGGTACG-AGTTGTAATTCGTCAGCAAGCAACAACTGAGAAAGGAAATAAGGC 93
consensus_10572#1      TCTTATGAGGTACGGAGTTGTAATTCGTCAGCAAGCAACAACTGAGAAAGGAAATAAGGC 300
                       *   * ****  ** *********************************************

consensus_10572#0      GGCAAGAGAGATCATTGACGACATGCGCCTGATCGTTAAGGAACTCCTACAGCTTTATTT 131
consensus_10572#2      GGCAAGAGAGATCATTGACGACATGCGCCTGATCGTTAAGGAACTCCTACAGCTTTATTT 153
consensus_10572#1      GGCAAGAGAGATCATTGACGACATGCGCCTGATCGTTAAGGAACTCCTACAGCTTTATTT 360
                       ************************************************************

consensus_10572#0      GCGAAATACAAATGGTCGGTTCCCTACCCGTATGATATTCTACCGCGATGGAGTTTCAGA 191
consensus_10572#2      GCGAAATACAAATGGTCGGTTCCCTACCCGTATGATATTCTACCGCGATGGAGTTTCAGA 213
consensus_10572#1      GCGAAATACAAATGGTCGGTTCCCTACCCGTATGATATTCTACCGCGATGGAGTTTCAGA 420
                       ************************************************************

consensus_10572#0      AGGACAATTCGAAAATGTTCTTGT-GAAGAGCTTGCAGCCATCCAGAGGGCATGCTCAGA 250
consensus_10572#2      AGGACAATTCGAAAATGTTCTTGTTGAAGAGCTTGCAGCCATCCAGAGGGCATGCTCAGA 273
consensus_10572#1      AGGACAATTCGAAAATGTTCTTGTTGAAGAGCTTGCAGCCATCCAGAGGGCATGCTCAGA 480
                       ************************ ***********************************

consensus_10572#0      TGTGCGTCCTGGTGAAGAGCCGGCTATAACTTATATCGTTGTCCAAAAACGCCATCATAT 310
consensus_10572#2      TGTGCGTCCTGGTGAAGAGCCGGCTATAACTTATATCGTTGTCCAAAAACGCCATCATAT 333
consensus_10572#1      TGTGCGTCCTGGTGAAG------------------------------------------- 497
                       *****************                                           

consensus_10572#0      TCGGTTCAAACCCTCTGATCCCAGAGCGCGAAACGTGGAACCTGGGACGGTTGTTGACAC 370
consensus_10572#2      TCGGTTCAAACCCTCTGATCCCAGAGCGCGAAACGTGGAACCTGGGACGGTTGTTGACAC 393
consensus_10572#1      ------------------------------------------------------------
                                                                                   

consensus_10572#0      AGAAATAACTCATCCAAGAGAATTCGACTTTTATCTGTGCTCTCAAGACGGAATTCAGGG 430
consensus_10572#2      AGAAATAACTCATCCAAGAGAATTCGACTTTTATCTGTGCTCTCAAGACGGAATTCAGGG 453
consensus_10572#1      ------------------------------------------------------------
                                                                                   

consensus_10572#0      AACGTCCAAACCTGCCCATTACCATGTGTTATATGATGACAGTAACTGGTCGTCCGATGC 490
consensus_10572#2      AACGTCCAAACCTGC--------------------------------------------- 468
consensus_10572#1      ------------------------------------------------------------
                                                                                   

consensus_10572#0      TCTACAAATGTTCACTTATCATTTATGCTACACTTATATGAGATGCTCTCGTAGCGTATC 550
consensus_10572#2      ------------------------------------------------------------
consensus_10572#1      ------------------------------------------------------------
                                                                                   

consensus_10572#0      TTATCCAGCACCAACCTATTATTCCCATTTGGCTGCTTTTCGTGCTAGAGATTGGTTATC 610
consensus_10572#2      ------------------------------------------------------------
consensus_10572#1      ------------------------------------------------------------
                                                                                   

consensus_10572#0      GGGAGTAGACCAACCAGCTGTTTTATTGGATAGTGGTCGCTTCAAAGTTCATGCTTCACA 670
consensus_10572#2      ------------------------------------------------------------
consensus_10572#1      ------------------------------------------------------------
                                                                                   

consensus_10572#0      GGTTGACGGGATGTTTTATCTATAGAGTTACACAGATTTTTTCATAACATATCTATATAA 730
consensus_10572#2      ------------------------------------------------------------
consensus_10572#1      ------------------------------------------------------------
                                                                                   

consensus_10572#0      ATAAACTATATACTTTTCTAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTCTCTCTCT 790
consensus_10572#2      ------------------------------------------------------------
consensus_10572#1      ------------------------------------------------------------
                                                                                   

consensus_10572#0      CTCTCTC 797
consensus_10572#2      -------
consensus_10572#1      -------
                              




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)