cluster # 10581

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Schistosoma mansoni
cluster # 10581 cluster # 10581 Sequences # 18 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10581#0 length = 1129 sequences # 15

consensus_10581#1 length = 769 sequences # 1
consensus_10581#2 length = 601 sequences # 2

consensusID : consensus_10581#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1129
fasta sequence

                              [CCACTCAGATATATACTTCTGAAAAGCGTGGCTCCGATACGACTGGAGACGGAACAGAAACAGCTCCTCTTAAAACTGTTCTTCAGGCCATCACTAAGTTAGATGGAAAAATTGATGCAGATACGCTCATTTGGGTTGATGGTGTTGAAAATGGAATGTGGGATCCTGTATCTAAATCTAAACTAAAAAAGGTGATCAAACAATATCATATT-CAAGAAAGGAAACATGATAAGGTGTCAAAGGAGAAAGTTCCATCTGCTGAAAACGGTAATCTTAGTGAAGCAGTGGATACTCAACTGCGTTTGGACACAGAATTACCTGAAGCGAAACGATGTAAAATTCGTGATTTACAAACTTTATACCATCAACGTGTATGTGTGTATGGTTGGGTGCATCGAATACGTCGTCAGAGTAAAACTTTAATGTTCATTATACTTCGCGATGGCACTGGGTTCTTGCAATGTACGAGACCAAACAACCTGTGTTTAACTCAGGATGCAATCACACTATCACCAGAGTCTACTGTCGAAGTTTATGGAGTGGTAAAACAATTGCCATCTGGCAAGTCAGCTCCTGGAGGCATAGAATTGGTTGCTGATGGTTGGGCGATAATTGGTAAAGCACCAGCTGGTGGCATCGACTCTGTATTAACTGTGGAAAGTGATATAGACACTCAGTTGGACAACAGACATTTGGTTATTCGAGGAGAAAATACAGCGAAAGTGCTCAGGCTCGTCAGTGTTGCTTTGGAAGCTTTTCGTGCACATTTCGTAGATCGTGGTTATGTGGAGGTTTTACCGCCGACATTTGTTCAAACTCAAGTCGAAGGCAGTGCTACATTGTTTTCTTTGAATTACTTTGGTGAGACTGCATTCATGTCTCAATCGTCTCAGTTGTATTTAGAAACATGTATACCTGCTGTAGGTGACTGCTTCTGCATAACCCGTAGCTATCGAGCTGAAAAAAGTAGAACTCGGCGCCATTTATCTGAATATAATCACGTTGAAGCGGAATGTCCATTTATTGATTTGAATGGTTTATTAGAACGAATTGAGGATTTAGTTGTGGATGTTTGTGATCGCATCATGAAACGATCCGGTGATCTGTTGTTAGATGTGAACCCGCAATT]

[+] EMBL CD118513             [CCACTCAGATATATACTTCTGAAAAGCGTGGCTCCGATACGACTGGAGACGGAACAGAAACAGCTCCTCTTAAAACTGTTCTTCAGGCCATCACTAAGTTAGATGGAAAAATTGATGCAGATACGCTCATTTGGGTTGATGGTGTTGAAAATGGAATGTGGGATCCTGTATCTAAATCTAAACTAAAAAAGGTGATCAAACAATATCATATTCCAAGAAAGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD098350             [                                                 CGGAACAGAAACAGCTCCTCTTAAGACTGTTCTTCAGGCCATCACTAAGTTAGATGGAAAAATTGATGCAGATACGCGCATTTGGGTTGATGGTGTTGAAAATGGAATGTGGGATCCTGTATCTAAATCTAAACTAAAAAAGGTGATCAAACAATATCATATT CAAGAAAGGAAACATGATAAGGTGTCAAAGGAGAAAGTTCCATCTGCTGAAAACGGTAATCTTAGTGAAGCAGTGGATACTCAACTGCGTTTGGACACAGAATTACCTGAAGCGAAACGATGTAAAATTCGTGATTTACAAACTTTATACCATCAACGTGTATGTGTGTATGGTTGGGTGCATCGAATACGTCGTCAGAGTAAAACTTTAATGTTCATTATACTTCGCGATGGCACTGGGTTCTTGCAATGTGTTTTTTCAAACAACCTGTGTTTAACTCAGGATGCAATCACACTATCACCAGAGTCTACTGTCGAAG TTATGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD125273             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                               cTACGAGACCAAACAACCTGTGTTTAACTCAGGATGCAATCACACTATCACCAGAGTCTACTGTCGAAGTTTATGGAGTGGTAAAACAATTGCCATCTGGCAAGTCAGCTCCTGGAGGCATAGAATTGGTTGCTGATGGTTGGGCGATAATTGGTAAAGCACCAGCTGGTGGCATCGACTCTGTATTAACTGTGGAAAGTGATATAGACACTCACTCGGACAACAGACATTTGGTTATTCGAGGAGAAAATACAGCGAAAGTGCTCAGGCTCGTCAGTGTTGCTTTGGAAGCTTTTCGTGCACATTTCGTAGATCGTGGTTATGTGGAGGTTTTACCGCCGACATTTGTTCAAACTCAAGTCGAAGGCAGTGCTACATTATTTTCTTTGAATTACTTTGGTGAGACTGCATTCA                                                                                                                                                                                                                                                             ]
[+] EMBL CD125290             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                cACGAGACCAAACAACCTGTGTTTAACTCAGGATGCAATCACACTATCACCAGAGTCTACTGTCGAAGTTTATGGAGTGGTAAAACAATTGCCATCTGGCAAGTCAGCTCCTGGAGGCATAGAATTGGTTGCTGATGGTTGGGCGATAATTGGTAAAGCACCAGCTGGTGGCATCGACTCTGTATTAACTGTGGAAAGTGATATAGACACTCAGTTGGACAACAGACATTTGGTTATTCGAGGAGAAAATACAGCGAAAGTGCTCAGGCTCGTCAGTGTTGCTTTGGAAGCTTTTCGTGCACATTTCGTAGATCGTGGTTATGTGGAGGTTTTACCGCCGACATTTGTTCAAACTCAAGTCGAAGGCAGTGCTACATTGTTTTCTTTGAATTACTTTGGTGAGACTGCATTCA                                                                                                                                                                                                                                                             ]
[+] EMBL CD125292             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGTGTTTAACTCAGGATGCAATCACACTATCACCAGAGTCTACTGTCGAAGTTTATGGAGTGGTAAAACAATTGCCATCTGGCAAGTCAGCTCCTGGAGGCATAGAATTGGTTGCTGATGGTTGGGCGATAATTGGTAAAGCACCAGCTGGTGGCATCGACTCTGTATTAACTGTGGAAAGTGATATAGACACTCAGTTGGACAACAGACATTTGGTTATTCGAGGAGAAAATACAGCGAAAGTGCTCAGGCTCGTCAGTGCTGCTTTGGAAGCTTTTCGTGCACATTTCGTAGATCGTGGTTATGTGGAGGTTTTACCACCGACATTTGTTCAAACTCAAGTCGAAGGCAGTGCTACATTGTTTTCTTTGTATTACTTTGGTGAGACTGCATTCA                                                                                                                                                                                                                                                             ]
[+] EMBL CD125230             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGTGTTTAACTCAGGATGCAATCACACTATCACCAGAGTCTACTGTCGAAGTTTATGGAGTGGTAAAACAATTGCCATCTGGCAAGTCAGCTCCTGGAGGCATAGAATTGGTTGCTGATGGTTGGGCGATAATTGGTAAAGCACCAGCTGGTGGCATCGACTCTGTATTAACTGTGGAAAGTGATATAGACACTCAGTTGGACAACAGACATTTGGTTATTCGAGGAGAAAATACAGCGAAAGTGCTCAGGCTCGTCAGTGTTGCTTTGGAAGCTTTTCGTGCACATTTCGTAGATCGTGGTTATGTGGAGGTTTTACCGCCGACATTTGTTCAAACTCAAGTCGAAGGCAGTGCTACACTGTTTTCTTTGAATTACTTTGGTGAGACTGCATTCA                                                                                                                                                                                                                                                             ]
[+] EMBL CD125232             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGTGTTTAACTCAGGATGCAATCACACTATCACCAGAGTCTACTGTCGAAGTTTATGGAGTGGTAAAACAATTGCCATCTGGCAAGTCAGCTCCTGGAGGCATAGAATTGGTTGCTGATGGTTGGGCGATAATTGGTAAAGCACCAGCTGGTGGCATCGACTCTGTATTAACTGTGGAAAGTGATATAGACACTCAGTTGGACAACAGACATTTGGTTATTCGAGGAGAAAATACAGCGAAAGTGCTCAGGCTCGTCAGTGTTGCTTTGGAAGCTTTTCGTGCACATTTCGTAGATCGTGGTTATGTGGAGGTTNTACCGCCGACATTTGTTCAAACTCAAGTCGAAGGCAGTGCTACATTGTTTTCTTTGAATTACTTTGGTGAGACTGCATTCA                                                                                                                                                                                                                                                             ]
[+] EMBL CD125262             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGTGTTTAACTCAGGATGCAATCACACTATCACCAGAGTCTACTGTCGAAGTTTATGGAGTGGTAAAACAATTGCCATCTGGCAAGTCAGCTCCTGGAGGCATAGAATTGGTTGCTGATGGTTGGGCGATAATTGGTAAAGCACCAGCTGGTGGCATCGACTCTGTATTAACTGTGGAAAGTGATATAGACACTCAGTTGGACAACAGACATTTGGTTATTCGAGGAGAAAATACAGCGAAAGTGCTCAGGCTCGTCAGTGTTGCTTTGGAAGCTTTTCGTGCACATTCCGTAGATCGTGGTTATGTGGAGGTTTTACCGCCGACATTTGTTCAAACTCAAGTCGAAGGCAGTGCTACATTGTTTTCTTTGAATTACTTTGGTGAGACTGCATTCA                                                                                                                                                                                                                                                             ]
[+] EMBL CD125256             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGTGTTTAACTCAGGATGCAATCACACTATCACCAGAGTCTACTGTCGAAGTTTATGGAGTGGTAAAACAATTGCCATCTGGCAAGTCAGCTCCTGGAGGCATAGAATTGGTTGCTGATGGTTGGGCGATAATTGGTAAAGCACCAGCTGGTGGCATCGACTCTGCATTAACTGTGGAAAGTGATATAGACACTCAGTTGGACAACAGACATTTGGTTATTCGAGGAGAAAATACAGCGAAAGTGCTCAGGCTCGTCAGTGTTGCTTTGGAAGCTTTTCGTGCACATTTCGTAGATCGTGGTTATGTGGAGGTTTTACCGCCGACATTTGTTCAAACTCAAGTCGAAGGCAGTGCTACATTGTTTTCTTTGAATTACTTTGGTGAGACTGCATTCA                                                                                                                                                                                                                                                             ]
[+] EMBL CD125302             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGTGTTTAACTCAGGATGCAATCACACTATCACCAGAGTCTACTGTCGAAGTTTATGGAGTGGTAAAACAATTGCCATCTGGCAAGTCAGCTCCTGGAGGCATAGAATTGGTTGCTGATGGTTGGGCGATAATTGGTAAAGCACCAGCTGGTGGCATCGACTCTGTATTAACTGTGGAAAGTGATATAGACACTCAGTTGGACAACAGACATTTGGTTATTCGAGGAGAAAATACAGCGAAAGTGCTCAAGCTCGTCAGTGTTGCTTTGGAAGCTTTTCGTGCACATTTCGTAGATCGTGGTTATGTGGAGGTTTTACCGCCGACATTTGTTCAAACTCAAGTCGAAGGCAGTGCTACATTGTTTTCTTTGAATTACTTTGGTGAGACTGCATTCA                                                                                                                                                                                                                                                             ]
[+] EMBL CD125330             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGTGTTTAACTCAGGATGCAATCACACTATCACCAGAGTCTACTGTCGAAGTTTATGGAGTGGTAAAACAATTGCCATCTGGCAAGTCAGCTCCTGGAGGCATAGAATTGGTTGCTGATGGTTGGGCGATAATTGGTAAAGCACCAGCTGGTGGCATCGACTCTGTATTAACTGTGGAAAGTGATATAGACACTCAGTTGGACAACAGACATTTGGTTATTCGAGGAGAAAATACAGCGAAAGTGCTCAGGCTCGTCAGTGTTGCTTTGGAAGCTTTTCGTCCACATTTCGTAGATCGTGGTTATGTGGAGGTTTTACCGCCGACATTTGTTCAAACTCAAGTCGAAGGCAGTGCTACATTGTTTTCTTTGAATTACTTTGGTGAGACTGCATTCA                                                                                                                                                                                                                                                             ]
[+] EMBL CD125358             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGTGTTTAACTCAGGATGCAATCACACTATCACCAGAGTCTACTGTCGAAGTTTATGGAGTGGTAAAACAATTGCCATCTGGCAAGTCAGCTCCTGGAGGCATAGAATTGGTTGCTGATGGTTGGGCGATAATTGGTAAAGCACCAGCTGGTGGCATCGACTCTGTATTAACTGTGGAAAGTGATATAGACACTCAGTTGGACAACAGACATTTGGTTATTCGAGGAGAAAATACAGCGAAAGTGCTCAGGCTCGTCAGTGTTGCTTTGGAAGCTTTTCGTCCACATTTCGTAGATCGTGGTTATGTGGAGGTTTTACCGCCGACATTTGTTCAAACTCAAGTCGAAGGCAGTGCTACATTGTTTTCTTTGAATTACTTTGGTGAGACTGCATTCA                                                                                                                                                                                                                                                             ]
[+] EMBL CD125311             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGTGTTTAACTCAGGATGCAATCACACTATCACCAGAGTCTACTGTCGAAGTTTATGGAGTGGTAAAACAATTGCCATCTGGCAAGTCAGCTCCTGGAGGCATAGAATTGGTTGCTGATGGTTGGGCGATAATTGGTAAAGCACCAGCTGGTGGCATCGACTCTGTATTAACTGTGGAAAGTGATATAGACACTCAGTTGGACAACAGACATTTGGTTATTCGAGGAGAAAATACAGCGAAAGTGCTCAGGCTCGTCAGTGTTGCTTTGGAAGCTTTTCGTGCACATTTCGTAGATCGTGGTTATGTGGAGGTTTTACCGCCGACATTTGTTCAAACTCAAGTCGAAGGCAGTGCTACATTGGTTTCTTTNGATTACTTTGGTGAGACTGCATTCA                                                                                                                                                                                                                                                             ]
[+] EMBL CD125294             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGTGTTTAACTCACGATGCAATCACACTATCACCAGAGTCTACTGTCGAAGTTTATGGAGTGGTAAAACAATTGCCATCTGGCAAGTCATCTCCTGGAGGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD167801             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATAATTGGTAAAGCACCAGCTGGTGGCATCGACTCTGTATTAACTGTGGAAAGTGATATAGATACTCAGTTGGACAACAGACATTTGGTTATTCGAGGAGAAAATACAGCGAAAGTGCTCAGGCTCGTCAGTGTTGCTTTGGAAGCTTTTCGTGCACATTTCGTAGATCGTGGTTATGTGGAGGTTTTACCGCCGACATTTGTTCAAACTCAAGTCGAAGGCAGTGCTACATTGTTTTCTTTGAATTACTTTGGTGAGACTGCATTCATGTCTCAATCGTCTCAGTTGTATTTAGAAACATGTATACCTGCTGTAGGTGACTGCTTCTGCATAACCCGTAGCTATCGAGCTGAAAAAAGTAGAACTCGGCGCCATTTATCTGAATATAATCACGTTGAAGCGGAATGTCCATTTATTGATTTGAATGGTTTATTAGAACGAATTGAGGATTTAGTTGTGGATGTTTGTGATCGCATCATGAAACGATCCGGTGATCTGTTGTTAGATGTGAACCCGCAATT]




>consensus_10581#0
CCACTCAGATATATACTTCTGAAAAGCGTGGCTCCGATACGACTGGAGACGGAACAGAAA
CAGCTCCTCTTAAAACTGTTCTTCAGGCCATCACTAAGTTAGATGGAAAAATTGATGCAG
ATACGCTCATTTGGGTTGATGGTGTTGAAAATGGAATGTGGGATCCTGTATCTAAATCTA
AACTAAAAAAGGTGATCAAACAATATCATATTCAAGAAAGGAAACATGATAAGGTGTCAA
AGGAGAAAGTTCCATCTGCTGAAAACGGTAATCTTAGTGAAGCAGTGGATACTCAACTGC
GTTTGGACACAGAATTACCTGAAGCGAAACGATGTAAAATTCGTGATTTACAAACTTTAT
ACCATCAACGTGTATGTGTGTATGGTTGGGTGCATCGAATACGTCGTCAGAGTAAAACTT
TAATGTTCATTATACTTCGCGATGGCACTGGGTTCTTGCAATGTACGAGACCAAACAACC
TGTGTTTAACTCAGGATGCAATCACACTATCACCAGAGTCTACTGTCGAAGTTTATGGAG
TGGTAAAACAATTGCCATCTGGCAAGTCAGCTCCTGGAGGCATAGAATTGGTTGCTGATG
GTTGGGCGATAATTGGTAAAGCACCAGCTGGTGGCATCGACTCTGTATTAACTGTGGAAA
GTGATATAGACACTCAGTTGGACAACAGACATTTGGTTATTCGAGGAGAAAATACAGCGA
AAGTGCTCAGGCTCGTCAGTGTTGCTTTGGAAGCTTTTCGTGCACATTTCGTAGATCGTG
GTTATGTGGAGGTTTTACCGCCGACATTTGTTCAAACTCAAGTCGAAGGCAGTGCTACAT
TGTTTTCTTTGAATTACTTTGGTGAGACTGCATTCATGTCTCAATCGTCTCAGTTGTATT
TAGAAACATGTATACCTGCTGTAGGTGACTGCTTCTGCATAACCCGTAGCTATCGAGCTG
AAAAAAGTAGAACTCGGCGCCATTTATCTGAATATAATCACGTTGAAGCGGAATGTCCAT
TTATTGATTTGAATGGTTTATTAGAACGAATTGAGGATTTAGTTGTGGATGTTTGTGATC
GCATCATGAAACGATCCGGTGATCTGTTGTTAGATGTGAACCCGCAATT

consensusID : consensus_10581#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 769
fasta sequence

                              [NNNNNNNNNNNNNNNGGAGGTTTTACCGCCGACATTTGTTCAAACTCAAGTCGAAGGCAGTGCTACATTGTTTTCTTTGAATTACTTTGGTGAGACTGCATTCATGTCTCAATCGTCTCAGTTGTATTTAGAAACATGTATACCTGCTGTAGGTGACTGCTTCTGCATAACCNNNNNNNNNNCGAGCTGAAAAAAGTAGAACTCGGCGCCATTTATCTGAATATAATCACGTTGAAGCGGAATGTCCATTTATTGATTTGAATGGTTTATTAGAACGAATTGAGGATTTAGTTGTGGATGTTTGTGATCGCATCATGAAACGATCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAACACCTAAACGTCCTTTCAAACGACTAAAATACGAAGATGCAATTGTTTGTTTAAATAATTTAGGTATTACAAAGGAAGATCTTACACCTTTTCAGTATGGTGATGATATTCCTGAGGCTCCTGAACGTCGACTTGTAGACACAATTGGTGAACCGGTTCTTGTTACGAACTAAGGTGATGAACGTCTAACTGACTCGTTGATCACTTGTCCCAGCGTTGTGATTAGTCGGTGGATATGCGTGTAGAGATATGATATCTCTCAAGGATATCAGCGAAGAACAGATCACCGCTATACTGTATACGATCACCCAATTCGAACTTGTCCATGTGGCTATGAATAGCTCAACGATTTGACTGCACATATGATATCATTAACCTACTTTTTGATTCCCGCTGTCTAATAAC]

[+] EMBL CD080940             [NNNNNNNNNNNNNNNGGAGGTTTTACCGCCGACATTTGTTCAAACTCAAGTCGAAGGCAGTGCTACATTGTTTTCTTTGAATTACTTTGGTGAGACTGCATTCATGTCTCAATCGTCTCAGTTGTATTTAGAAACATGTATACCTGCTGTAGGTGACTGCTTCTGCATAACCNNNNNNNNNNCGAGCTGAAAAAAGTAGAACTCGGCGCCATTTATCTGAATATAATCACGTTGAAGCGGAATGTCCATTTATTGATTTGAATGGTTTATTAGAACGAATTGAGGATTTAGTTGTGGATGTTTGTGATCGCATCATGAAACGATCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAACACCTAAACGTCCTTTCAAACGACTAAAATACGAAGATGCAATTGTTTGTTTAAATAATTTAGGTATTACAAAGGAAGATCTTACACCTTTTCAGTATGGTGATGATATTCCTGAGGCTCCTGAACGTCGACTTGTAGACACAATTGGTGAACCGGTTCTTGTTACGAACTAAGGTGATGAACGTCTAACTGACTCGTTGATCACTTGTCCCAGCGTTGTGATTAGTCGGTGGATATGCGTGTAGAGATATGATATCTCTCAAGGATATCAGCGAAGAACAGATCACCGCTATACTGTATACGATCACCCAATTCGAACTTGTCCATGTGGCTATGAATAGCTCAACGATTTGACTGCACATATGATATCATTAACCTACTTTTTGATTCCCGCTGTCTAATAAC]




>consensus_10581#1
NNNNNNNNNNNNNNNGGAGGTTTTACCGCCGACATTTGTTCAAACTCAAGTCGAAGGCAG
TGCTACATTGTTTTCTTTGAATTACTTTGGTGAGACTGCATTCATGTCTCAATCGTCTCA
GTTGTATTTAGAAACATGTATACCTGCTGTAGGTGACTGCTTCTGCATAACCNNNNNNNN
NNCGAGCTGAAAAAAGTAGAACTCGGCGCCATTTATCTGAATATAATCACGTTGAAGCGG
AATGTCCATTTATTGATTTGAATGGTTTATTAGAACGAATTGAGGATTTAGTTGTGGATG
TTTGTGATCGCATCATGAAACGATCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTC
AAAACACCTAAACGTCCTTTCAAACGACTAAAATACGAAGATGCAATTGTTTGTTTAAAT
AATTTAGGTATTACAAAGGAAGATCTTACACCTTTTCAGTATGGTGATGATATTCCTGAG
GCTCCTGAACGTCGACTTGTAGACACAATTGGTGAACCGGTTCTTGTTACGAACTAAGGT
GATGAACGTCTAACTGACTCGTTGATCACTTGTCCCAGCGTTGTGATTAGTCGGTGGATA
TGCGTGTAGAGATATGATATCTCTCAAGGATATCAGCGAAGAACAGATCACCGCTATACT
GTATACGATCACCCAATTCGAACTTGTCCATGTGGCTATGAATAGCTCAACGATTTGACT
GCACATATGATATCATTAACCTACTTTTTGATTCCCGCTGTCTAATAAC

consensusID : consensus_10581#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 601
fasta sequence

                              [TTAGATGTGAACCCGCAATTCAAAACACCTAAACGTCCTTTCAAACGACTAAAATACGAAGATGCAATTGTTTGTTTAAATAATTTAGGTATTACAAAGGAAGATCTTACACCTTTTCAGTATGGTGATGATATTCCTGAGGCTCCTGAACGTCGACTTGTAGACACAATTGGTGAACCGGTTCTGTTAACTAATTTTCCTGCTGGATTAAAAGTCTTCTATATGTTACGAACTAAAGGTGATGAACGTCTAACTGACTCGGTTGATCTACTTGTCCCAGGCGTTGGTGAATTAGTCGGTGGATCAATGCGTGTAGATGATATTGATAATCTTCTCAAAGGATATCAGTCAGAGGAAACAGATCCAACCGCTTATTACTGGTATACAGATCAGCGCAAATTCGGAACTTGTCCACATGGTGGCTATGGATTAGGCTTCGAACGATTTTGTACTTGGCTTTTAGGCAAAGATCATATACGAGATGTTTGCTTATATCCTCGCTTCATGGGTCGATGTCGACCATGAGTGATAGTTTCATTATAACCCCTACATCTTTGTATGGATGTACTCTGTTCTGTTCTTAAATTATCAGTACAAAATT]

[-] EMBL CD074774             [TTAGATGTGAACCCGCAATTCAAAACACCTAAACGTCCTTTCAAACGACTAAAATACGAAGATGCAATTGTTTGTTTAAATAATTTAGGTATTACAAAGGAAGATCTTACACCTTTTCAGTATGGTGATGATATTCCTGAGGCTCCTGAACGTCGACTTGTAGACACAATTGGTGAACCGGTTCTGTTAACTAATTTTCCTGCTGGATTAAAAGTCTTCTATATGTTACGAACTAAAGGTGATGAACGTCTAACTGACTCGGTTGATCTACTTGTCCCAGGCGTTGGTGAATTAGTCGGTGGATCAATGCGTGTAGATGATATTGATAATCTTCTCAAAGGATATCAGTCAGAGGAAACAGATCCAACCGCTTATTACTGGTATACAGATCAGCGCAAATTCGGAACTTGTCCACATGGTGGCTATGGATTAGGCTTCGAACGATTTTGTACTTGGCTTTTAGGCAAAGATCATATACGAGATGTTTGCTTATATCCTCGCTTCATGGGTCGATGTCGACCATGAGTGATAGTTTCATTATAACCCCTACATCTTTGTATGGATGTACTCTGTTCTGTTCTTAAATTATCAGTACAAAATT]
[-] EMBL CD178359             [                                                                                                                                                                                                                    AGTCTTCTATATGTTACGAACTAAAGGTGATGAACGTCTAACTGACTCGGTTGATCTACTTGTCCCAGGCGTTGGTGAATTAGTCGGTGGATCAATGCGTGTAGATGATATTGATAATCTTCTCAAAGGATATCAGTCAGAGGAAACAGATCCAACCGCTTATTACTGGTATACAGATCAGCGCAAATTCGGAACTTGTCCACATGGTGGCTATGGATTAGGCTTCGAACGATTTTGTACTTGGCTTTTAGGCAAAGATCATATACGAGATGTTTGCTTATATCCTCGCTTCATGGGTCGATGTCGACCATGAGTGATAGTTTCATTATAACCCCTtcca                                                 ]




>consensus_10581#2
TTAGATGTGAACCCGCAATTCAAAACACCTAAACGTCCTTTCAAACGACTAAAATACGAA
GATGCAATTGTTTGTTTAAATAATTTAGGTATTACAAAGGAAGATCTTACACCTTTTCAG
TATGGTGATGATATTCCTGAGGCTCCTGAACGTCGACTTGTAGACACAATTGGTGAACCG
GTTCTGTTAACTAATTTTCCTGCTGGATTAAAAGTCTTCTATATGTTACGAACTAAAGGT
GATGAACGTCTAACTGACTCGGTTGATCTACTTGTCCCAGGCGTTGGTGAATTAGTCGGT
GGATCAATGCGTGTAGATGATATTGATAATCTTCTCAAAGGATATCAGTCAGAGGAAACA
GATCCAACCGCTTATTACTGGTATACAGATCAGCGCAAATTCGGAACTTGTCCACATGGT
GGCTATGGATTAGGCTTCGAACGATTTTGTACTTGGCTTTTAGGCAAAGATCATATACGA
GATGTTTGCTTATATCCTCGCTTCATGGGTCGATGTCGACCATGAGTGATAGTTTCATTA
TAACCCCTACATCTTTGTATGGATGTACTCTGTTCTGTTCTTAAATTATCAGTACAAAAT
T

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10581#1      -------------------------------------------------NNNNNNNNNNN 11
consensus_10581#2      ------------------------------------------------------------
consensus_10581#0      CCACTCAGATATATACTTCTGAAAAGCGTGGCTCCGATACGACTGGAGACGGAACAGAAA 60
                                                                                   

consensus_10581#1      NNNNGGAGGTTTTACCGCCGACATTTGTTCAAACTCAAGTCGAAGGCAGTGCTACATTGT 71
consensus_10581#2      ------------------------------------------------------------
consensus_10581#0      CAGCTCCTCTTAAAACTGTTCTTCAGGCCATCACTAAGTTAGATGGAAAAATTGATGCAG 120
                                                                                   

consensus_10581#1      TTTCTTTGAATTACTTTGGTGAGACTGCATTCATGTCTCAATCGTCTCAGTTGTATTTAG 131
consensus_10581#2      ------------------------------------------------------------
consensus_10581#0      ATACGCTCATTTGGGTTGATGGTGTTGAAAATGGAATGTGGGATCCTGTATCTAAATCTA 180
                                                                                   

consensus_10581#1      AAACATGTATACCTGCTGTAGGTGACTGCTTCTGCATAACCNNNNNNNNNNCGAGCTGAA 191
consensus_10581#2      ------------------------------------------------------------
consensus_10581#0      AACTAAAAAAGGTGATCAAACAATATCATATTCAAGAAAGGAAACATGATAAGGTGTCAA 240
                                                                                   

consensus_10581#1      AAAAGTAGAACTCGGCGCCATTTATCTGAATATAATCACGTTGAAGCGGAATGTCCATTT 251
consensus_10581#2      ------------------------------------------------------------
consensus_10581#0      AGGAGAAAGTTCCATCTGCTGAAAACGGTAATCTTAGTGAAGCAGTGGATACTCAACTGC 300
                                                                                   

consensus_10581#1      ATTGATTTGAATGGTTTATTAGAACGAATTGAGGATTTAGTTGTGGATGTTTGTGATCGC 311
consensus_10581#2      ------------------------------------------------------------
consensus_10581#0      GTTTGGACACAGAATTACCTGAAGCGAAACGATGTAAAATTCGTGATTTACAAACTTTAT 360
                                                                                   

consensus_10581#1      ATCATGAAACGATCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAA--AACACCT 369
consensus_10581#2      ----------------------------TTAGATGTGAACCCGCAATTCAA--AACACCT 30
consensus_10581#0      ACCATCAACGTGTATGTGTGTATGGTTGGGTGCATCGAATACGTCGTCAGAGTAAAACTT 420
                                                                         *  ** ** *

consensus_10581#1      AAACGTCCTTTCAA----ACGACTAAAATACGAAGATGCAAT-TGTTTGTTTAAATAATT 424
consensus_10581#2      AAACGTCCTTTCAA----ACGACTAAAATACGAAGATGCAAT-TGTTTGTTTAAATAATT 85
consensus_10581#0      TAATGTTCATTATACTTCGCGATGGCACTGGGTTCTTGCAATGTACGAGACCAAACAACC 480
                        ** ** * **  *     ***    * *  *    ****** *    *   *** **  

consensus_10581#1      TAGGTATTACAAAGGAAGATCTTACACCTTTTC---AGTATGGTGATGATATTCCTGAGG 481
consensus_10581#2      TAGGTATTACAAAGGAAGATCTTACACCTTTTC---AGTATGGTGATGATATTCCTGAGG 142
consensus_10581#0      TGTGTTTAACTCAGGATGCAATCACACTATCACCAGAGTCTACTGTCGAAGTTTATGGAG 540
                       *  ** * **  **** *   * ****  *  *   *** *  **  **  **  **  *

consensus_10581#1      CTCCTGAACGTCGACTTGTAGACACAATTGGTGAACCGGTTCT----------------- 524
consensus_10581#2      CTCCTGAACGTCGACTTGTAGACACAATTGGTGAACCGGTTCTGTTAACTAATTTTCCTG 202
consensus_10581#0      TGGTAAAACAATTGCCATCTGGCA-AGTCAGCTCCTGGAGGCATAGAATTGGTTG--CTG 597
                             ***     *     * ** * *  *      *   *                  

consensus_10581#1      ---------------------TGTTACGAACTAA-GGTGATGAACGTCTAACTGACTCG- 561
consensus_10581#2      CTGGATTAAAAGTCTTCTATATGTTACGAACTAAAGGTGATGAACGTCTAACTGACTCGG 262
consensus_10581#0      ATGGTTGGGCGATAATTGGTAAAGCACCAGCTGGTGGC-ATCGACTCTGTATTAACTGTG 656
                                                ** * **   **  **  **     * * ***   

consensus_10581#1      TTGATC-ACTTGTCCCAG-CGTTGT--GATTAGTCGGTGGAT--ATGCGTGTAGA-GATA 614
consensus_10581#2      TTGATCTACTTGTCCCAGGCGTTGGTGAATTAGTCGGTGGATCAATGCGTGTAGATGATA 322
consensus_10581#0      GAAAGTGATATAGACACTCAGTTGGACAACAGACATTTGGTT--ATTCGAGGAGAAAATA 714
                          *   *  *   *     ****    *        *** *  ** ** * ***  ***

consensus_10581#1      T-GATATCTCTC---AAGGATATCAGC-GAAG---AACAGATC--ACCGCTA--TACTG- 661
consensus_10581#2      TTGATAATCTTCTCAAAGGATATCAGT-CAGAGGAAACAGATCCAACCGCTTATTACTGG 381
consensus_10581#0      CAGCGAAAGTGCTC-AGGCTCGTCAGTGTTGCTTTGGAAGCTTTTCGTGCACATTTCGTA 773
                         *  *     *   * *    ****            ** *      **    * *   

consensus_10581#1      TATAC-GATCA-CCC--AATT-------CG-AACTTGTCCAT---GTGGCTATGAAT--A 704
consensus_10581#2      TATACAGATCA-GCGCAAATT-------CGGAACTTGTCCACATGGTGGCTATGGATTAG 433
consensus_10581#0      GATCGTGGTTATGTGGAGGTTTTACCGCCGACATTTGTTCAAACTCAAGTCGAAGGCAGT 833
                        **   * * *        **       **  * **** **       *           

consensus_10581#1      GCTC--AACGATTTG--ACTGCACATATG-----ATATCATTAACCTACTTTTTGATTCC 755
consensus_10581#2      GCTTCGAACGATTTTGTACTTGGCTTTTAGGCAAAGATCATATACGAGATGTTTGCTTAT 493
consensus_10581#0      GCTAC-ATTGTTTTCTTTGAATTACTTTGGTGAGACTGCATTCATGTCTCAATCGTCTCA 892
                       ***   *  * ***           * *      *   ***  *        * *  *  

consensus_10581#1      --CGCTGTCTAATAAC-------------------------------------------- 769
consensus_10581#2      ATCCTCGCTTCATGGGTCGATGTCGACCATGAGTGATAGTTTCATTATAACCCCTACATC 553
consensus_10581#0      GTTGTATTTAGAAACATGTATACCTGCTGTAGGTGACTGCTTCTGCATAACCCGTA-GCT 951
                                  *                                                

consensus_10581#1      ------------------------------------------------------------
consensus_10581#2      TTTGTATGGATGTACTCTGTTCTGTTCTTAAATTATCAGTACAAAATT------------ 601
consensus_10581#0      ATCGAGCTGAAAAAAGTAGAACTCGGCGCCATTTATCTGAATATAATCACGTTGAAGCGG 1011
                                                                                   

consensus_10581#1      ------------------------------------------------------------
consensus_10581#2      ------------------------------------------------------------
consensus_10581#0      AATGTCCATTTATTGATTTGAATGGTTTATTAGAACGAATTGAGGATTTAGTTGTGGATG 1071
                                                                                   

consensus_10581#1      ----------------------------------------------------------
consensus_10581#2      ----------------------------------------------------------
consensus_10581#0      TTTGTGATCGCATCATGAAACGATCCGGTGATCTGTTGTTAGATGTGAACCCGCAATT 1129