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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10582#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1908 fasta sequence
[TCGGCACGAGGGGGTTTTATCGAGTTAGACTACCTACTTTCAATTTCCATCCCGAGATTGTCTTAGTCTGAGGCTTGTGTTAGTTCTGATTGTTGTAGATTGATGTTATCATTAAATTTGAGTTCTTTGTCTGTGCTTTCTGGGTCGTCGATTCTCTTTTTCTGTTTTCCCTTTACTAGGCCTCCTTATGCTACTGTATGCTACCCTAGTATATAAAGTATTTTCTGGCTAGACGCGAACCTCCACAAGTCAAAAGATGATTCCGGCTTTGATCTTTAGTTTTTTATTACCTTTATCGTTCGGTCTGTTAACCAGACATTTTCCGTGGTCAACAATCAAGAATCCGGATTTCACGTACGAAACGAAATACTTTTGGACCAGGGTGGACCACTTTTCTTTCGTAAACGATGAAAAGTTCCTCATCAGGTATCTAATTAACAACGAGTCGTTCACTCCGGGTGGTCCGATACTTTTTTACACAGGCAATGAAGGTCCTATAGAAACTTTTGCAGAGAATTCAGGGTTTATTTGGAAGCTTTCTCGGGAACTTAATGCTTCTGTTGTTTTTGCCGAACATCGGTATTACGGGACGTCTCTTCCATTCGGGAATAATTCTTTCAAAGACCGTCGGCACTTTGGTTACCTAACTGCAGAGCAAACGTTGGCTGATTATGTGCTTCTAATTAATCAACTGAAAGCTAATTACTCATGCTTCGCTTCGTCACCTGTAATCGCTTTCGGAGGATCCTATGGTGGTATGCTCTCTGCTTGGATCAGACAAAAGTATCCTAATCAAATAGCCGGTGCCATAGCTTCTTCTGCACCAGTATGGCTGTTTCCCGGATTATCTGACTGCAATGGTTTCAGTATGACAATAACAAATAGCTTTCTGAAATATGGTGGCGAGAATTGTGTAAAGAATATACAACTTTCTTGGAGTAATATTGTAGACATAGGCCAAAGTGTTGATGGGAAAGAATTATTAACTCACATGTTTAACATCTGTACGCCTTTAACTGATGTTCAGAATATCATAGATTACTTATCCGATTTTTTGGGAATAATATCTATGGTCAATTATCCTTACCCAGCTAGCCTGATTCTTGCTTTACCTGAATGGCCAGTCAAGTATTTGTGTACCAACCTATCTGAATATGA-CCCTCATCAACCTGTGGTAACCAGAATATCTTTATTAGCTAAGGCTGTACTATCACTGACGAATTATACTGGTAATCAAACGTGTTTAGATATTTCAATGAATTTGCCAAATGTGGACGTTAATGGATGGGATTTACAGGCTTGCATGGAGATGGTAACACCTACGTGTGCATCAGGACCGGTAAACATTATGCCTCCATCAAATTGGGACCTTAAGAATTACTCAATCTATTGTCAAAATCGATTTGGTGTAAGTCCGCGTGTCGAATGGCCAAAAGTTGAATTTTGGAGTAAATCAGTATATACTGTTACTAATATAATTTTCAGCAATGGTGAGATTGATCCATGGTCAGCATTTTCAATTACAAATAATAGTTATGTCCCATTTGCTACAGTGATCAATATGTCTGATGCTGCTCATCATTTGGATTTGAGAACTCCTAACTCGGCTGATCCTCAAAGTGTGGTTGAAGCAAGAGAAATTGAAAAACAGAAGATAATTCAATGGATAAAAGAATGGAACCTTAAATACAAATTGTTAAAATTTTTCAATGGAATTGTATCGTTCATCTCTTTACTAGATTACCTTGGCTAATGTTTAAAGAAATATTTTATATTTTTTGTTGCTACAATTTTCATGATAATAATCGTAATTTAAACTGATGTAATAACTCATAATCAAACTTTTTTCACCTTAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACT]
[+] EMBL CD082854 [TCGGCACGAGGGGGTTTTATCGAGTTAGACTACCTACTTTCAATTTCCATCCCGAGATTGTCTTAGTCTGAGGCTTGTGTTAGTTCTGATTGTTGTAGATTGATGTTATCATTAAATTTGAGTTCTTTGTCTGTGCTTTCTGGGTCGTCGATTCTCTTTTTCTGTTTTCCCTTTACTAGGCCTCCTTATGCTACTGTATGCTACCCTAGTATATAAAGTATTTTCTGGCTAGACGCGAACCTCCACAAGTCAAAAGATGATTCCGGCTTTGATCTTTAGTTTTTTATTACCTTTATCGTTCGGTCTGTTAACCAGACATTTTCCGTGGTCAACAATCAAGAATCCGGATTTCACGTACGAAACGAAATACTTTTGGACCAGGGTGGACCACTTTTCTTTCGTAAACGATGAAAAGTTCCTCATCAGGTATCTAATTAACAACGAGTCGTTCACTCCGGGTGGTCCGATACTTTTTTACACAGGCAATGAAGGTCCTATAGAAACTTTTGCAGAGAATTCAGGGTTTATTTGGAAGCTTTCTCGGGAACTTAATGCTTCTGTTGTTTTTGCCGAACATCGGTATTACGGGACGTCTCTTCCATTCGGGAATAATTCTTTCAAA ]
[+] EMBL CD084106 [ ggcacgaggTTTACACAGGCAATGAAGGTCCTATAGAAACTTTTGCAGAGAATTCAGGGTTTATTTGGAAGCTTTCTCGGGAACTTAATGCTTCTGTTGTTTTTGCCGAACATCGGTATTACGGGACGTCTCTTCCATTCGGGAATAATTCTTTCAAAGACCGTCGGCACTTTGGTTACCTAACTGCAGAGCAAACGTTGGCTGATTATGTGCTTCTAATTAATCAACTGAAAGCTAATTACTCATGCTTCGCTTCGTCACCTGTAATCGCTTTCGGAGGATCCTATGGTGGTATGCTCTCTGCTTGGATCAGACAAAAGTATCCTAATCAAATAGCCGGTGCCATAGCTTCTTCTGCACCAGTATGGCTGTTTCCCGGATTATCTGACTGCAATGGTTTCAGTATGACAATAACAAATAGCTTTCTGAAATATG ]
[+] EMBL CD062190 [ CTATAGAAACTTTTGCAGAGAATTCAGGGTTTATTTGGAAGCTTTCTCGGGAACTTAATGCTTCTGTTGTTTTTGCCGAACATCGGTATTACGGGACGTCTCTTCCATTCGGGAATAATTCTTTCAAAGACCGTCGGCACTTTGGTTACCTAACTGCAGAGCAAACGTTGGCTGATTATGTGCTTCTAATTAATCAACTGAAAGCTAATTACTCATGCTTCGCTTCGTCACCTGTAATCGCTTTCGGAGGATCCTATGGTGGTATGCTCTgggt ]
[-] EMBL BG930543 [ GGATCCTATGGTGGTATGCTCTCTGTTTGGATCAGACAAAAGTATCCTAATCAAATAGCCGGTGCCATAGCTTTTTCTGCACCAGTATGGCTGTTTCCCGGATTATCTGACTGCAATGGTTTCAGTATGACAATAACAAATAGCTTTCTGAAATATGGTGGCGAGAATTGTGTAAAGAATATACAACTTTCTTGGAGTAATATTGTAGACATAGGCCAAAGTGTTGATGGGAAAGAATTATTAACTCACATGTTTAACATCTGTACGCCTTTAACTGATGTTCAGAATATCATAGATTACTTATCCGATTTTTTGGGAATAATATCTATGGTCAATTATCCTTACCCAGCTAGCCTGATTCTTGCTTTACCTGAGTGGCCAGTCAAGTATTTGTGTACCAACCTATCTGAATATGAt ]
[-] EMBL BG930579 [ TCCTATGGTGGTATGCTCTCTGCTTGGATCAGACAAAAGTATCCTAATCAAATAGCCGGTGCCATAGCTTCTTCTGCACCAGTATGGCTGTTTCCCGGATTATCTGACTGCAATGGTTTCAGTATGACAATAACAAATAGCTTTCTGAAATATGGTGGCGAGAATTGTGTAAAGAATATACAACTTTCTTGGAGTAATATTGTAGACATAGGCCAAAGTGTTGATGGGAAAGAATTATTAACTCACATGTTTAACATCTGTACGCCTTTAACTGATGTCCAGAATATCATAGATTACTTATCCGATTTTTTGGGAATAATATCTATGGTCAATTATCCTTACCCAGCTAGCCTGATTCTTGCTTTACCTGAATGGCCAGTCAAGTATTTGTGTACCAACCTATCTGAATATGAGCCCCCAT ]
[+] EMBL BG931324 [ GTCAATTATCCTTACCCAGCTAGCCTGATTCTTGCTTTACCTGAATGGCCAGTCAAGTATTTGTGTACCAACCTATCTGAATATGA CCCTCAACAACCTGTGGTAACCAGAATATCTTTATTAGCTAAGGCTGTACTATCACTGACGAATTATACTGGTAATCAAACGTGTTTAGATATTTCAATGAATTTGCCAAATGTGGATGTTAATGGATGGGATTTACAGGCTTGCATGGAGATGGTAACACCTACGTGTGCATCAGGA ]
[-] EMBL BG930605 [ TCAATTATCCTTACCCAGCTAGCATGATTCTTGCTTTACCTGAATGGCCAGTCAAGTATTTGTGTACCAACCTATCTGAATATGA CCCTCATCAACCTGTGGTAACCAGAATATCTTTATTAGCTAAGGCTGTACTATCACTGACGAATTATAGTGGTAATCAAACGTGTTTAGATATTTCAATGAATTTGCCAAATGTGGACGTTAATGGATGGGATTTACAGGCTTGCATGGAGATGGTAACACCTACGTGTGCATCAGGACCGGTAAACATTATGCCTCCATCAAATTGGGACCTTAAGAA ]
[-] EMBL BG930599 [ TCAATTATCCTTACCCAGCTAGCCTGATTCTTGCTTTACCTGAATGGCCAGTCAAGTATTTGTGTACCAACCTATCTGAATATGA CCCTCAACAACCTGTGGTAACCAGAATATCTTTATTAGCTAAGGCTGTACTATCACTGACGAATTATACTGGTAATCAAACGTGTTTAGATATTTCAATGAATTTGCCAAATGTGGACGTTAATGGATGGGATTTACAGGCTTGCATGGAGATGGTAACACCTACGTGTGCATCAGGACCGGTAAACATTATGCCTCCATCAAATTGGGACCTTAAGAA ]
[-] EMBL AI976472 [ AGGACCGGTAAACATTATGCCTCCATCAAATTGGGACCTTAAGACTTACTCAATCTATTGTCAAAATCGATTTGGTGTAAGTCCGCGTGTCGAATGGCCAAAAGTTGAATTTTGGAGTAAATCAGTATATACTGTTACTAATATAATTTTCAGCAATGGTGAGATTGATCCATGGTCAGCATTTTCAATTACAAATAATAGTTATGTCCCATTTGCTACAGTGATCAATATGTCTGATGCTGCTCATCATTTGGATTTGAGAACTCCTAACTCGGCTGATCCTCAAAGTGTGGTTGAAGCAAGAGAAATTGAAAAACAGAAGATAATTCAATGGATAAAAGAATGGAACCTTAAATACAAATTGTTAAAATTTTTCAATGGAATTGTATCGTTCATCTCTTTACTAGATTACCTTGGCTAATGTTTAAAGAAATATTTTATATTTTTTGTTGCTACAATTTTCATGATAATAATCGTAATTTAAACTGATGTAATAACTCATAATCAAACTTTTTTCACCTTAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACT]
consensusID : consensus_10582#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 951 fasta sequence
[CCGAGCCAAAAATTCGGCACGAGGATTATCCTTACCCAGCTAGCCTGATTCTTGCTTTACCTGAATGGCCAGTCAAGTATTTGTGTACCAACCTATCTGAATATGACCCTCAACAACCTGTGGTAACCAGAATATCTTTATTAGCTAAGGCTGTACTATCACTGACGAATTATACTGGTAATCAAACGTGTTTAGATATTTCAATGAATTTGCCAAATGTGGACGTTAATGGATGGGATTTACAGGCTTGCATGGAGATGGTAACACCTACGTGTGCATCAGGACCGGTAAACATTATGCCTCCATCAAATTGGGACCTTAAGACTTACTCAATCTATTGTCAAAATCGATTTGGTGTAAGTCCGCGTGTCGAATGGCCAAAAGTTGAATTTTGGAGTAAATCAGTATATACTGTTACTAATATAATTTTCAGCAATGGTGAGATTGATCCATGGTCAGCATTTTCAATTACAAATAATAGTTATGTCCCATTTGCTACAGTGATCAATATGTCTGATGCTGCTCATCATTTGGATTTGAGAACTCCTAACTCGGCTGATCCTCAAAGTGTGGTTG-AAGCAAGAGAAATTGAAAAACAGAAAATAATTCAATGGATAAAAGAATGGACCCTTAAGTACAAATTGTTAAAAATTTTCAATGGAATTGTATCGTTCATCTCTTTACTAGATTACCTTGGCTAATGTTTAAAGAAATATTTTATATTTTTTGTTGCTACAATTTTCATGATAATAATCGTAATTTAAACTGATGTAATAACTCAAAAT-CAAACTTTTTTCACCTTAAAAAGTAATTTTTCATGATTGATTTAAGTTGGCTCATACAGTGTTTCTGAACGTATTGGGAAAAATTGAAAACTTTCTTCATTTAAATAGTGCGAATGAATCGTGTAGCGTAGTTGGAAATGTTTGTTGACTATAAAACGTAAATTAT]
[+] EMBL CD082997 [CCGAGCCAAAAATTCGGCACGAGGATTATCCTTACCCAGCTAGCCTGATTCTTGCTTTACCTGAATGGCCAGTCAAGTATTTGTGTACCAACCTATCTGAATATGACCCTCAACAACCTGTGGTAACCAGAATATCTTTATTAGCTAAGGCTGTACTATCACTGACGAATTATACTGGTAATCAAACGTGTTTAGATATTTCAATGAATTTGCCAAATGTGGACGTTAATGGATGGGATTTACAGGCTTGCATGGAGATGGTAACACCTACGTGTGCATCAGGACCGGTAAACATTATGCCTCCATCAAATTGGGACCTTAAGACTTACTCAATCTATTGTCAAAATCGATTTGGTGTAAGTCCGCGTGTCGAATGGCCAAAAGTTGAATTTTGGAGTAAATCAGTATATACTGTTACTAATATAATTTTCAGCAATGGTGAGATTGATCCATGGTCAGCATTTTCAATTACAAATAATAGTTATGTCCCATTTGCTACAGTGATCAATATGTCTGATGCTGCTCATCATTTGGATTTGAGAACTCCTAACTCGGCTGATCCTCANAGTGTGGTTGAAAGC AGAG ]
[+] EMBL CD187108 [ ACTGGTAATCAAACGTGTTTAGATATTTCAATGAATTTGCCAAATGTGGACGTTAATGGATGGGATTTACAGGCTTGCATGGAGATGGTAACACCTACGTGTGCATCAGGACCGGTAAACATTATGCCTCCATCAAATTGGGACCTTAAGACTTACTCAATCTATTGTCAAAATCGATTTGGTGTAAGTCCGCGTGTCGAATGGCCAAAAGTTGAATTTTGGAGTAAATCAGTATATACTGTCACTAATATAATTTTCAGCAATGGTGAGATTGATCCATGGTCAGCATTTTCAATTACAAATAATAGTTATGTC ]
[-] EMBL CD167692 [ GATGGTAACACCTACGTGTGCATCAGGACCGGTAAACATTATGCCTCCATCAAATTGGGACCTTAAGACTTACTCAATCTATTGTCAAAATCGATTTGGTGTAAGTCCGCGTGTCGAATGGCCAAAAGTTGAATTTTGGAGTAAATCAGTATATACTGTTACTAATATAATTTTCAGCAATGGTGAGATTGATCCATGGTCAGCATTTTCAATTACAAATAATAGT ]
[-] EMBL CD076440 [ AGGACGGGTAAACATTATGCCTCCATCAAATTGGGACCTTAAGACTTACTCAATCTATTGTCAAAATCGATTTGGTGTAAGTCCGCGTGTCGAATGGCCAAAAGTTGAATTTTGGAGTAAATCAGTATATACTGTTACTAATATAATTTTCAGCAATGGTGAGATTGATCCATGGTCAGCATTTTCAATTACAAATAATAGTTATGTCCCATTTGCTACAGTGATCAATATGTCTGATGCTGCTCATCATTTGGATTTGAGAACTCCTAACTCGGCTGATCCTCAAAGTGTGGTTG AAGCAAGAGAAATTGAAAAACAGAAAATAATTCAATGGATAAAAGAATGGACCCTTAAGTACAAATTGTTAAAAATTTTCAATGGAATTGTATCGTTCATCTCTTTACTAGATTACCTTGGCTAATGTTTAAAGAAATATTTTATATTTTTTGTTGCTACAATTTTCATGATAATAATCGTAATTTAAACTGATGTAATAACTCAAAATCCAAACTT ]
[-] EMBL CD076580 [ GGTGTAAGTCCGCGTGTCGAATGGCCAAAAGTTGAATTTTGGAGTAAATCAGTATATACTGTTACTAATATAATTTTCAGCAATGGTGAGATTGATCCATGGTCAGCATTTTCAATTACAAATAATAGTTATGTCCCATTTGCTACAGTGATCAATATGTCTGATGCTGCTCATCATTTGGATTTGAGAACTCCTAACTCGGCTGATCCTCAAAGTGTGGTTG AAGCAAGAGAAATTGAAAAACAGAAAATAATTCAATGGATAAAAGAATGGAACCTTAAGTACAAATTGTTAAAAATTTTCAATGGAATTGTATCGTTCATCTCTTTACTAGATTACCTTGGCTAATGTTTAAAGAAATATTTTATATTTTTTGTTGCTACAATTTTCATGATAATAATCGTAATTTAAACTGATGTAATAACTCATAAT CAAACTTTTTTCACCTTAAAAAGTAATTTTTCATGATTGATTTAAGTTGGCTCATACAGTGTTTCTGAACGTATTGGGAAAAATTGAAAACTTTCTTCATTTAAATAGTGCGAATGAATCGTGTAGCGTAGTTGGAAATGTTTGTTGACTATAAAACGTAAATTAT]
consensusID : consensus_10582#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 496 fasta sequence
[CTCGATTTGGTGTAAGTCCGCGTGTCGAATGGCCAAAAGTTGAATTTTGGAGTAAATCAGTATATACTGTTACTAATATAATGTTCAGCAATGGTGAGATTGATCCATGGTCAGCATTTTCAATTACAAATAATAGTTATGTCCCATTTGCTACAGTGATCAATATGTCTGATGCTGCTCATCATTTGGATTTGAGAACTCCTAACTCGGCTGATCCTCAAAGTGTGGTTGAAGCAAGAGAAATTGAAAAACAGAAAATAATTCAATGGATAAAAGAATGGAACCTTAAGTACAAATTGTTAAAAATTTTCAATGGAATTGTATCGTTCATCTCTTAACTAGATTACCTTGGCTAATGTTTAAAGAAATATTTTATATTTTTTGTTGCCACAATTTTCATGATAATAATCGTAATTTAAACTGATGTAATAACTCATAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA]
[-] EMBL AI975223 [CTCGATTTGGTGTAAGTCCGCGTGTCGAATGGCCAAAAGTTGAATTTTGGAGTAAATCAGTATATACTGTTACTAATATAATGTTCAGCAATGGTGAGATTGATCCATGGTCAGCATTTTCAATTACAAATAATAGTTATGTCCCATTTGCTACAGTGATCAATATGTCTGATGCTGCTCATCATTTGGATTTGAGAACTCCTAACTCGGCTGATCCTCAAAGTGTGGTTGAAGCAAGAGAAATTGAAAAACAGAAAATAATTCAATGGATAAAAGAATGGAACCTTAAGTACAAATTGTTAAAAATTTTCAATGGAATTGTATCGTTCATCTCTTAACTAGATTACCTTGGCTAATGTTTAAAGAAATATTTTATATTTTTTGTTGCCACAATTTTCATGATAATAATCGTAATTTAAACTGATGTAATAACTCATAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA]
consensusID : consensus_10582#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 336 fasta sequence
[TCATTGTGTTTGGCGCGATTTGTGTATTGTTGGGTTTTATCGAGTTAGACTACCTACTTTCAATTTCCATCCCGAGATTGTCTTAGTCTGGGGCTTGTGTTAGTTCTGATTGTTGTAGATTGATGTTATCATTAAATTTGAGTTCTTTGTCTGTGCTTTCTGGGTCGTCGATTCTCTTTTTCTGTTTTCCCTTTACTAGGCCTCCTTATGCTACTGTATGCTACCCTAGTATATAAAGTATTTTCTGGCTAGACGCGAACCTCCACAAGTCAAAAGATGATTCCGGCTTTGATCTTTAGTTTTTTATTACCTTTATCGTTCGGTCTGTTAACCAGA]
[-] EMBL CD126578 [TCATTGTGTTTGGCGCGATTTGTGTATTGTTGGGTTTTATCGAGTTAGACTACCTACTTTCAATTTCCATCCCGAGATTGTCTTAGTCTGGGGCTTGTGTTAGTTCTGATTGTTGTAGATTGATGTTATCATTAAATTTGAGTTCTTTGTCTGTGCTTTCTGGGTCGTCGATTCTCTTTTTCTGTTTTCCCTTTACTAGGCCTCCTTATGCTACTGTATGCTACCCTAGTATATAAAGTATTTTCTGGCTAGACGCGAACCTCCACAAGTCAAAAGATGATTCCGGCTTTGATCTTTAGTTTTTTATTACCTTTATCGTTCGGTCTGTTAACCAGA]
consensusID : consensus_10582#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 318 fasta sequence
[CTCAATTATCCTTACCCAGCTAGCCTGATTCTTGCTTTACCTGAATGGCCAGTCAAGTATTTGTGTACCAACCTATCTGAATATGACCCTCAACAACCTGTGGTAACCAGAATATCTTTATTAGCTAAGGCTGTACTATCACTGACGAATTATACTGGTAATCAAACGTGTTTAGATATTTCAATGAATTTGCCAAATGTGGACGTTAATGGATGGGATTTACAGGCTTGCATGGAGATGGTAACACCTACGTGTGCATTAGGACCGGGAAACATTATGCCTCCATTAAATTGGGTTCCCCGGTTATCTCAAAAACCT]
[+] EMBL BG930279 [CTCAATTATCCTTACCCAGCTAGCCTGATTCTTGCTTTACCTGAATGGCCAGTCAAGTATTTGTGTACCAACCTATCTGAATATGACCCTCAACAACCTGTGGTAACCAGAATATCTTTATTAGCTAAGGCTGTACTATCACTGACGAATTATACTGGTAATCAAACGTGTTTAGATATTTCAATGAATTTGCCAAATGTGGACGTTAATGGATGGGATTTACAGGCTTGCATGGAGATGGTAACACCTACGTGTGCATTAGGACCGGGAAACATTATGCCTCCATTAAATTGGGTTCCCCGGTTATCTCAAAAACCT]
consensusID : consensus_10582#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 295 fasta sequence
[TCCCGAGATTGTCTTAGTCTGAGGCTTGTGCCTCCTTATGCTACTGTATGCTACCCTAGTATATAAAGTATTTTCTGGCTAGACGCGAACCTCCACAAGTCAAAAGATGATTCCGGCTTTGATCTTTAGTTTTTTATTACCTTTATCGTTGACGTCTGTTAACCAGACATTTTCCGTGGTCAACAATCAAGAATCCGGATTTCACGTACGAAACGAAATACTTTTGGACCAGGGTGGACACTTTTCTTTCGTAAACGATGAAAAGTTCTCATCAGGGATCTAATTAACAACGAGT]
[+] EMBL SM58059 [TCCCGAGATTGTCTTAGTCTGAGGCTTGTGCCTCCTTATGCTACTGTATGCTACCCTAGTATATAAAGTATTTTCTGGCTAGACGCGAACCTCCACAAGTCAAAAGATGATTCCGGCTTTGATCTTTAGTTTTTTATTACCTTTATCGTTGACGTCTGTTAACCAGACATTTTCCGTGGTCAACAATCAAGAATCCGGATTTCACGTACGAAACGAAATACTTTTGGACCAGGGTGGACACTTTTCTTTCGTAAACGATGAAAAGTTCTCATCAGGGATCTAATTAACAACGAGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10582#3 ----------TCATTGTGTTTGGCGCGATTTGTGTATTGTTGGGTTT-TATCGAGTTAGA 49
consensus_10582#5 --------------------TCCCGAGATTGTCTTAGTCTGAGGCTTGTGCCTCCTTATG 40
consensus_10582#0 -------------------------------TCGGCACGAGGGGGTTTTATCGAGTTAGA 29
consensus_10582#1 CCGAGCCAAAAATTCGGCACGAGGATTATCCTTACCCAGCTAGCCTGATTCTTGCTTTA- 59
consensus_10582#4 --------------------CTCAATTATCCTTACCCAGCTAGCCTGATTCTTGCTTTA- 39
consensus_10582#2 ----CTCGATTTGGTGTAAGTCCGCGTGTCGAATGGCCAAAAGTTGAATTTTGGAGTAAA 56
* * *
consensus_10582#3 CTACCTACTTTCAATTTCCATCCCGAGATTGTCTTAGTCTGGGGCTTGTGTTAGTTCTGA 109
consensus_10582#5 CTAC-TGTATGCTACCCTAGTATATAAAGTATTTTCTGGCTAGACGCGAACC---TCCAC 96
consensus_10582#0 CTACCTACTTTCAATTTCCATCCCGAGATTGTCTTAGTCTGAGGCTTGTGTTAGTTCTGA 89
consensus_10582#1 CCTG-AATGGCCAGTCA-AGTATTTGTGTACCAACCTATCTGAATATGACCCTCAACAAC 117
consensus_10582#4 CCTG-AATGGCCAGTCA-AGTATTTGTGTACCAACCTATCTGAATATGACCCTCAACAAC 97
consensus_10582#2 TCAG-TATATACTGTTA-CTAATATAATGTTCAGCAATGGTGAGATTGATCCATGGTCAG 114
* *
consensus_10582#3 TTGTTGTAGATTGATGTTATCATTAAATTTGAGTTCTTTGTCTGTGCTTTCTGGGTCGTC 169
consensus_10582#5 AAGTCAAAAGATGATTCCGGCTTTGATCTTTAGTTTTTTAT---TACCTTTATCGTTGAC 153
consensus_10582#0 TTGTTGTAGATTGATGTTATCATTAAATTTGAGTTCTTTGTCTGTGCTTTCTGGGTCGTC 149
consensus_10582#1 CTGTGGTA-ACCA-GAATATCTTTATTAGCTAAGGCTGTACTATCACTGACGAATT--AT 173
consensus_10582#4 CTGTGGTA-ACCA-GAATATCTTTATTAGCTAAGGCTGTACTATCACTGACGAATT--AT 153
consensus_10582#2 CATTTTCA-ATTACAAATAATAGTTATGTCCCATTTGCTACAGTGATCAATATGTCTGAT 173
* * * *
consensus_10582#3 GATTCTCTTTTTCTGTTTTCCCTTTACTAGGCCTCCTTATGCTACTGTATGCTACCCTAG 229
consensus_10582#5 GTCTGTTAACCAGACATTTTCCGTGGTCAACAATC---AAGAATCCGGATTTCACG-TAC 209
consensus_10582#0 GATTCTCTTTTTCTGTTTTCCCTTTACTAGGCCTCCTTATGCTACTGTATGCTACCCTAG 209
consensus_10582#1 ACTGGTAATCAAACGTGTTTAGATATT------TCAATGAATTTGCCAAATGTGGACGTT 227
consensus_10582#4 ACTGGTAATCAAACGTGTTTAGATATT------TCAATGAATTTGCCAAATGTGGACGTT 207
consensus_10582#2 GCTGCTCATCATTTGGATTTGAGAACTCCTAACTCGGCTGATCCTCAAAGTGTGGTTGA- 232
* ** ** *
consensus_10582#3 TATATAAAGTATTTTCTGGCTAGACGCGA-ACCTCCACAAGTCAAAAGATGATTCCGGCT 288
consensus_10582#5 GAAACGAAATACTTTTGGACCAGGGTGGACACTTTTCTTTCGTAAACGATGAA--AAGTT 267
consensus_10582#0 TATATAAAGTATTTTCTGGCTAGACGCGA-ACCTCCACAAGTCAAAAGATGATTCCGGCT 268
consensus_10582#1 AATGGATGGGATTTACAGGCTTGCATGGA---GATGGTAACACCTACGTGTGCATCAGGA 284
consensus_10582#4 AATGGATGGGATTTACAGGCTTGCATGGA---GATGGTAACACCTACGTGTGCATTAGGA 264
consensus_10582#2 AGCAAGAGAAATTGAAAAACAGAAAATAATTCAATGGATAAAAGAATGGAACCTTAAGTA 292
* * * * * * *
consensus_10582#3 T---TGATCTTTAGTTTTTTATTACCTTTATCGTTCGGTCTGTTAACCAGA--------- 336
consensus_10582#5 C---TCATC--AGGGATCTAATTAACAACGA-GT-------------------------- 295
consensus_10582#0 T---TGATCTTTAGTTTTTTATTACCTTTATCGTTCGGTCTGTTAACCAGACATTTTCCG 325
consensus_10582#1 CCGGTAAACATTATGCCTCCATCAAATTGGGACCTTAA--GACTTACTCAATCTATTGTC 342
consensus_10582#4 CCGGGAAACATTATGCCTCCATTAAATTGGGTTCCCC---GGTTATCTCAAAAACCT--- 318
consensus_10582#2 CAAATTGTTAAAAATTTTCAATGGAATTGTATCGTTCATCTCTTAACTAGATTACCTTGG 352
**
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 TGGTCAACAATCAAGAATCCGGATTTCACGTACGAAACGAAATACTTTTGGACCAGGGTG 385
consensus_10582#1 AAAATCGATTTGGTGTAAGTCCGCGTGTCGAATGGCCAAAAGTTGAATTTTGGAGTAAAT 402
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 CTAATGTTTAAAGAAATATTTTATATTTTTTGTTGCCACAATTTTCATGATAATAATCGT 412
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 GACCACTTTTCTTTCGTAAACGATGAAAAGTTCCTCATCAGGTATCTAATTAACAACGAG 445
consensus_10582#1 CAGTATATACTGTTACTAATATAATTTTCAGCAATGGTGAGATTGATCCATGGTCAGCAT 462
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 AATTTAAACTGATGTAATAACTCATAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCAT 472
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 TCGTTCACTCCGGGTGGTCCGATACTTTTTTACACAGGCAATGAAGGTCCTATAGAAACT 505
consensus_10582#1 TTTCAATTACAAATAATAGTTATGTCCCATTTGCTACAGTGATCAATATGTCTGATGCTG 522
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 GCAGCTGCATTACCGTACTGCGTA------------------------------------ 496
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 TTTGCAGAGAATTCAGGGTTTATTTGGAAGCTTTCTCGGGAACTTAATGCTTCTGTTGTT 565
consensus_10582#1 CTCATCATTTGGATTTGAGAACTCCTAACTCGGCTGATCCTCAAAGTGTGGTTGAAGCAA 582
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 TTTGCCGAACATCGGTATTACGGGACGTCTCTTCCATTCGGGAATAATTCTTTCAAAGAC 625
consensus_10582#1 GAGAAATTGAAAAACAGAAAATAATTCAATGGATAAAAGAATGGACCCTTAAGTACAAAT 642
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 CGTCGGCACTTTGGTTACCTAACTGCAGAGCAAACGTTGGCTGATTATGTGCTTCTAATT 685
consensus_10582#1 TGTTAAAAATTTTCAATGGAATTGTATCGTTCATCTCTTTACTAGATTACCTTGGCTAAT 702
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 AATCAACTGAAAGCTAATTACTCATGCTTCGCTTCGTCACCTGTAATCGCTTTCGGAGGA 745
consensus_10582#1 GTTTAAAGAAATATTTTATATTTTTTGTTGCTACAATTTTCATGATAATAATCGTAATTT 762
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 TCCTATGGTGGTATGCTCTCTGCTTGGATCAGACAAAAGTATCCTAATCAAATAGCCGGT 805
consensus_10582#1 AAACTGATGTAATAACTCAAAATCAAACTTTTTTCACCTTAAAAAGTAATTTTTCATGAT 822
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 GCCATAGCTTCTTCTGCACCAGTATGGCTGTTTCCCGGATTATCTGACTGCAATGGTTTC 865
consensus_10582#1 TGATTTAAGTTGGCTCATACAGTGTTTCTGAACGTATTGGGAAAAATTGAAAACTTTCTT 882
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 AGTATGACAATAACAAATAGCTTTCTGAAATATGGTGGCGAGAATTGTGTAAAGAATATA 925
consensus_10582#1 CATTTAAATAGTGCGAATGAATCGTGTAGCGTAGTTGGAAATGTTTGTTGACTATAAAAC 942
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 CAACTTTCTTGGAGTAATATTGTAGACATAGGCCAAAGTGTTGATGGGAAAGAATTATTA 985
consensus_10582#1 GTAAATTAT--------------------------------------------------- 951
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 ACTCACATGTTTAACATCTGTACGCCTTTAACTGATGTTCAGAATATCATAGATTACTTA 1045
consensus_10582#1 ------------------------------------------------------------
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 TCCGATTTTTTGGGAATAATATCTATGGTCAATTATCCTTACCCAGCTAGCCTGATTCTT 1105
consensus_10582#1 ------------------------------------------------------------
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 GCTTTACCTGAATGGCCAGTCAAGTATTTGTGTACCAACCTATCTGAATATGACCCTCAT 1165
consensus_10582#1 ------------------------------------------------------------
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 CAACCTGTGGTAACCAGAATATCTTTATTAGCTAAGGCTGTACTATCACTGACGAATTAT 1225
consensus_10582#1 ------------------------------------------------------------
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 ACTGGTAATCAAACGTGTTTAGATATTTCAATGAATTTGCCAAATGTGGACGTTAATGGA 1285
consensus_10582#1 ------------------------------------------------------------
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 TGGGATTTACAGGCTTGCATGGAGATGGTAACACCTACGTGTGCATCAGGACCGGTAAAC 1345
consensus_10582#1 ------------------------------------------------------------
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 ATTATGCCTCCATCAAATTGGGACCTTAAGAATTACTCAATCTATTGTCAAAATCGATTT 1405
consensus_10582#1 ------------------------------------------------------------
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 GGTGTAAGTCCGCGTGTCGAATGGCCAAAAGTTGAATTTTGGAGTAAATCAGTATATACT 1465
consensus_10582#1 ------------------------------------------------------------
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 GTTACTAATATAATTTTCAGCAATGGTGAGATTGATCCATGGTCAGCATTTTCAATTACA 1525
consensus_10582#1 ------------------------------------------------------------
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 AATAATAGTTATGTCCCATTTGCTACAGTGATCAATATGTCTGATGCTGCTCATCATTTG 1585
consensus_10582#1 ------------------------------------------------------------
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 GATTTGAGAACTCCTAACTCGGCTGATCCTCAAAGTGTGGTTGAAGCAAGAGAAATTGAA 1645
consensus_10582#1 ------------------------------------------------------------
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 AAACAGAAGATAATTCAATGGATAAAAGAATGGAACCTTAAATACAAATTGTTAAAATTT 1705
consensus_10582#1 ------------------------------------------------------------
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 TTCAATGGAATTGTATCGTTCATCTCTTTACTAGATTACCTTGGCTAATGTTTAAAGAAA 1765
consensus_10582#1 ------------------------------------------------------------
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 TATTTTATATTTTTTGTTGCTACAATTTTCATGATAATAATCGTAATTTAAACTGATGTA 1825
consensus_10582#1 ------------------------------------------------------------
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 ------------------------------------------------------------
consensus_10582#5 ------------------------------------------------------------
consensus_10582#0 ATAACTCATAATCAAACTTTTTTCACCTTAAAAAAAAAAAAAAAAAAAAAAAAAAACATG 1885
consensus_10582#1 ------------------------------------------------------------
consensus_10582#4 ------------------------------------------------------------
consensus_10582#2 ------------------------------------------------------------
consensus_10582#3 -----------------------
consensus_10582#5 -----------------------
consensus_10582#0 CCATGCAGCTGCATTACCGTACT 1908
consensus_10582#1 -----------------------
consensus_10582#4 -----------------------
consensus_10582#2 -----------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||