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Schistosoma mansoni
cluster # 10585 cluster # 10585       Sequences # 18       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10585#0 length = 1463 sequences # 15  
consensus_10585#1 length = 508 sequences # 3  

consensusID : consensus_10585#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1463
fasta sequence
                              [CTGGGTTCGACTACCTGTGATGAGATCGTGGGTGCACATTGTTTATGGGTCATATATTAGGACGAAACGGCCGTGCAGCGCTTCCAGGTTTTCATTGGTGGTCTAACTTAGATCGATTCGTGATTCTAATGAAATTTATTGCGTTGATCCAA-TTTTTAAAATGTTGTGACGAGGTTTTTTTCAAATGCTTTTAGTGAGTACGTTCACATTAAACATACAATTATAAGATAGTACTAACTCCCCCTAAACCTCACTTATTTTTCACCTGGTTCACAAATCACTGTTGCTATCATAATTATTTTATGAATTACTAATCACGTGTTTTACGGTTACCATAATCACTAACAAATTCATAACTTATTTGATTTGATTTACTCTACCTCCTCTTGGAAAAAAGGTCTGAATTTCCTTTTTAGAGTGTAAAAAAAATTGTATTGCGGTTTTCTGATTTTGATAATTTTTTATTATTGTTGCATAAATTTTGTAATACTTTCCCCATTTCTCTCTCTCTCTCTCTGTCTACAGAATAATGCTGATCAAAAATTGATAGAAAATTTGCATTGTCAAATTGAAAGCTTGAAACAAGAAATTAAAAGGTTACAACGTGGTGCATCTACAGTTGAAGAACGAACTGTCAATGGAAATGCTGGTGAATTTCATACATCACACAGCTCTCCAAGTCATTTTTACTCAATGGATCCGTATGGAAATGTGGATAAACAAAATGAAGAAAAATCTAATTCATTACATAATCCATCATACTACAGCGCTCAGTTGCAAGAATTACGTCAAACTGGT-GATTTAGAATTAGTCCGCGCACATCTCAGTCTGTCTGAACGACGTCGACGTGAGCTCGAAAGACGTATAACCGAACTAACTGATGAGTTAGCACGTTCTCGTGCTGAAGCCCGATCCGCGGAAACTAGTCTTTCTGCTGCTCGTCGAACTGAAGCTGCACTAAGAAGACGTCTTCTTGTTGCTATGGATTCTCGAGGTTCACCTAATGGAAATTATGAAATGAATATATCACGAAATTCACATGAATTCTCTACGAACGAAAGTTCAGAAACGATGAATGCTTTGGAGTTGCAGGCAGACATTATTAAACTTCAAGCTACCAATGCTTCTCTAACGGAAGCTGCTCTACTTGATCGAACAAGATTGCATGATCAAGCCATGCGTATAGACCAGTTGGAATCAGAGCATAAAGCTNTACTAGATCGAGTTTCATGTCTTCAGGCAGCTGAAACTGGTGCACAACGTGGTATTGTACGTTTACAGGCTCTNTATGAAGATATGCTACGTGAATATTCAGAGTCTAAGCCTTTGGAACTGTCTAACGTACGTGGACGTAATCGTCAGAGAAGCAGCTCTCGTAATTCTAGAAATAATGATTTTATTACAAATACTAGTTATAATGATAAGTATCGTGCTACATCACGAAATCATGACATAAGGGTAAC]

[+] EMBL CD149218             [CTGGGTTCGACTACCTGTGATGAGATCGTGGGTGCACATTGTTTATGGGTCATATATTAGGACGAAACGGCCGTGCAGCGCTTCCAGGTTTTCATTGGTGGTCTAACTTAAATCGATTCGTGATTCTAATGAAATTTATTGCGTTGATCCAA TTTTTAAAATGTTGTGACGAGGTTTTTTTCAAATGCTTTTACTGAGTCCGTTCACATTAGACATACAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD149313             [CTGGGTTCGACTACCTGTGATGAGATCGTGGGTGCACATTGTTTATGGGTCATATATTAGGACGAAACGGCCGTGCAGCGCTTCCAGGTTTTCATTGGTGGTCTAACTTAGATCGATTCGTGATTCTAATGAAATTTATCGCGTTGATCCAA TTTTTAAAATGTTGTGACGAGGTTTTTTTCAAATGCTTTTAGTGAGTACGTTCACATTAAACATACAATTATAAGATAGTACTAACTCCCCCTAAACCTCACTTATTTTTCACCTGGTTCACAAATCACTGTTGCTATCATAATTATTTTATGAATTACTAATCACGTGTTTTACGGTTACCATAATCATTAACAAATTCATAACTTATTTGATTTGATTTACTCTACCTCCTCTTGGAAAAAAGGTCTGAATTTCCTTTNTAGAGTGTAAAAAAAATTGTATTGCGGTTTTCTGATTCTGATAATTTTTTATTATTGTTGCATAAATTTTGTAATACTTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD149391             [CTGGGTTCGACTACCTGTGATGAGATCGTGGGTGCACATTGTTTATGGGTCATATATTAGGACGAAACGGCCGTGCAGCGCTTCCAGGTTTTCATTGGTGGTCTAACTTAGATCGATTCGTGATTCTAATGAAATTTATCGCGTTGATCCAA TTTTTAAAATGTTGTGACGAGGTTTTTTTCAAATGCTTTTAGTGAGTACGTTCACATTAAACATACAATTATAAGATAGTACTAACTCCCCCTAAACCTCACTTATTTTTCACCTGGTTCACAAATCACTGTTGCTATCATAATTATTTTATGAATTACTAATCACGTGTTTTACGGTTACCATAATCATTAACAAATTCATAACTTATTTGATTTGATTTACTCTACCTCCTCTTGGAAAAAAGGTCTGAATTTCCTTTTTAGAGTGTAAAAAAAATTGTATTGCGGTTTTCTGATTTTGATAATTATTTATTATTGCTGCATAAATCCTGTAATACTTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD149384             [CTGGGTTCGACTACCTGTGATGAGATCGTGGGTGCACATTGTTTATGGGTCATATATTAGGACGAAACGGCCGTGCAGCGCTTCCAGGTTTTCATTGGTGGTCTAACTTAGATCGATTCGTGATTCTAATGAAATTTATTGCGTTGATCCAA TTTTTAAAATGTTGTGACGAGGTTTTTTTCAAATGCTTTTAGTGAGTACGTTCACATTAAACATACAATTATAAGATAGTACTAACTCCCCCTAAACCTCACTTATTTTTCACCTGGTTCACAAATCACTGTTGCTATCATAATTATTTTATGAATTACTAATCACGTGTTTTACGGTTACCATAATCACTAACAAATTCATAACTTATTTGATTTGATTTACTCTACCTCCTCTTGGAAAAAAGGTCTGAATTTCCTTTNTAGAGTGTAAAAAAAATTGTATTGCGGTTTTCTGATTCTGATAATTTTTTATTATTGTTGCATAAATTTTGTAATACTTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD149166             [CTGGGTTCGACTACCTGTGATGAGATCGTGGGTGCACATTGTTTATGGGTCATATATTAGGACGAAACGGCCGTGCAGCGCTTCCAGGTTTTCATTGGTGGTCTAACTTAGATCGATTCGTGATTCTAATGAAATTTATTGCGTTGATCCGA TTTTTAAAATGTTGTGACGAGGTTTTTTTCAAATGCTTTTAGTGAGTACGTTCACATTAAACATACAATTATAAGATAGTACTAACTCCCCCTAAACCTCACCTATTTTTCACCTGGTTCACAAATCACTGTTGCTATCATAATTATTTTATGAATTACTAATCACGTGTTTTACGGTTACCATAATCACTAACAAATTCATAACTTATTTGATTTGATTTACTCTACCTCCTCTTGG AAAAAGGTCTGAATTTCCTTTTTAAAGTGTAAAAAANATTGTATTGCGGTTTTCTGATTTTGATAATTTTTTATTATTGTTGCATAAATTTTGTAATACTTTtc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD149285             [CTGGGTTCGACTACCTGTGATGAGATCGTGGGTGCACATTGTTTATGGGTCATATATTANGACGAAACGGCCGTGCAGCGCTTCCAGGTTTTCATTGGTGGTCTAACTTAGATCGATTCGTGATTCTAATGAAATTTATTGCGTTGATCCAA TTTTTAAAATGTTGTGACGAGGTTTTTTTCAAATGCTTTTAGTGAGTACGTTCACATTAAACATACAATTATAAGATAGTACTAACTCCCCCTAAACCTCACCTATTTTTCACCTGGTTCACAAATCACTGTTGCTATCATAATTATTTTATGAATTACTAATCACGTGTTTTACGGTTACCATAATCACTAACAAATTCATAACTTATTTGATTTGATTTACTCTACCTCCTCTTGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD149291             [CTGGGTTCGACTACCTGTGATGAGATCGTGGGTGCACATTGTTTATGGGTCATATATTATGACGAAACGGCCGTGCAGCGCTTCCAGGTTTTCATTGGTGGTCTAACTTAGATCGATTCGTGATTCTAATGAAATTTATTGCGTCGATCCAA TTTTTAAAATGTTGTGACGAGGTTTTTTTCAAATGCTTTTAGTGAGTACGTTCACATTAAACATACAATTATAAGATAGTACTAACTCCCCCTAAACCTCACCTATTTTTCACCTGGTTCACAAATCACTGTTGCTATCATAATTATTTTATGAATTACTAATCACGTGTTTTACGGTTACCATAATCACTAACAAATTCATAACTTATTTGATTTGATTTACTCTACCTCCTCTTGGAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD149307             [CTGGGTTCGACTACCTGTGATGAGATCGTGGGTGCACATTGTTTATGGGTCATATATTANGACGAAACGGCCGTGCAGCGCTTCCAGGTTTTCATTGGTGGTCTAACTTAGATCGATTCGTGATTCTAATGAAATTTATTGCGTTGATCCAA TTTTTAAAATGTTGTGACGAGGTTTTTTTCAAATGCTTTTAGTGAGTACGTTCACATTAAACATACAATTATAAGATAGTACTAACTCCCCCTAAACCTCACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD149351             [                                                                                                                                            GCGTTGATCCAATTTTTTANAATGTTGTGACGAGGTTTTTTTCAAATGCTTTTAGTGAGTACGTTCACATTAAACATACAATTATAAGATAGTACTAACTCCCCNTAAACCTCACTTATTTTTCACCTGGTTCACAAATCACTGTTGCTATCATAATTATTTTATGAATTACTAATCACGTGTTTTACGGTTACCATAATCACTAACAAATTCATAACTTATTTGATTTGATTTACTCTACCTCCTCTTGGAAAAAAGGTCTGAATTTCCTTTTTAGAGTGTAAAAAAAATTGTATTGCGGTTTTCTGATTTTGATAATTTTTTATTATTGTTGCATAAATTTTGTAATACTTTCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BF936251             [                                                                                                                                                                                                                                                                                                                                                                                                                      TTCCTTTTTAGAGTGTAAAAAAAATTGTATTGCGGTTTTCTGATTTTGATAATTTTTTATTATTGTTGCATAAATTTTGTAATACTTTCCCCATTTCTCTCTCTCTCTCTCTGTCTACAGAATAATGCTGATCAAAAATTGATAGAAAATTTGCATTGTCAAATTGAAAGCTTGAAACAAGAAATTAAAAGGTTACAACGTGGTGCATCTACAGTTGAAGAACGAACTGTCAATGGAAATGCTGGTGAATTTCATACATCACACAGCTCTCCAAGTCATTTTTACTCAATGGATCCGTATGGAAATGTGGATAAACAAAATGAAGAAAAATCTAATTCATTACATAATCCATCATACTACAGCGCTCAGTTGCAAGAATTACGTCAAACTGGT GATTTAGAATTAGTCCGCGCACATCTCAGTCTGTCTGAACGACGTCGACGTGAGCTCGAAAGACGTATAACCGAACTAACTGATGAGTTAGCACGTTCTCGTGCTGAAGCCCGATCCGCGGAAACTAGTCTTTCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD188204             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AATTAAAAGGTTACAACGTGGTGCATCTACAGTTGAAGAACGAACTGTCAATGGAAATGCTGGTGAATTTCATACATCACACAGCTCTCCAAGTCATTTTTACTCAATGGATCCGTATGGAAATGTGGATAAACAAAATGAAGAAAAATCTAATTCATTACATAATCCATCATACTACAGCGCTCAGTTGCAAGAATTACGTCAAACTGGT GATTTAGAATTAGTCCGCGCACATCTCAGTCTGTCTGAACGACGTCGACGTGAGCTCGAAAGACGTATAACCGAACTAACTGATGAGTTAGCACGTTCTCGTGCTGAAGCCCGATCCGCGGAAACTAGTCTTTCTGCTGCTCGTCGAACTGAAGCTGCACTAAGAAGACGTCTTCTTGTTGCTATGGATTCTCGAGGTTCACCTAATGGAAATTATGAAATGAATATATCACGAAATTCACATGAATTCTCTACGAACGAAAGTTCAGAAACGATGAAT                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD062558             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AAATGTGGATAAACAAAATGAAGAAAAATCTAATTCATTACATAATCCAATATACTACAGGGCTCAGTTGCAAGAATTACGTCAAACTGGTGGTTTTAAAATTAGTCCGCGCACATCTAATTTTGTTTGAACGACGTCAACGTGAGCTCGAAAGACGTATAACCGAACTAACTGATGAGTTAGCACGTTCTCGTGCTGAAGCCCGATCCGCGGAAACTAGTCTTTCTGCTGCTCGTCGAACTGAAGCTGCACTAAGAAGACGTCTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD062597             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AAGTGTGGATAAACAAAATGAACAAAAATCTAGTTCATTACATAATCCATCATACTACAGCGCTCAGTTGCAAGAATTACGTCCAACTGGT GATTTAAAATTACTCCGCGCACATTTCAGTCTGTCTGAACGACCTCTACGTGAGCTCTAACGACGTCTAACCGAACTAACTGATGAGTTACCACGTTCTCGTGCTGTAGCCCTATCCGCGGGAACTAGTCTTTCTGCTGCTCGTAAAACTGAAGCTGCACTAAGAAGACGTgctgt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AW017395             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGCCCGATCCGCGGAAACTAGTCTTTCTGCTGCTCGTCGAACTGAAGCTGCACTAAGAAGACGTCTTCTTGTTGCTATGGATTCTCGAGGTTCACCTAATGGAAATTATGAAATGAATATATCACGAAATTCACATGAATTCTCTACAAACGAAAGTTCAGAAACGATGAATGCTTTGGAGTTGCAGGCAGACATTATTAAACTTCAAGCTACCAATGCTTCTCTAACGGAAGCTGCTCTACTTGATCGAACAAGATTGCATGATCAAGCCATGCGTATAGACCAGTTGGAATCAGAGCATAAAGCTNTACTAGATCGAGTTTCATGTCTTCAGGCAGCTGAAACTGGTGCACAACGTGGTATTGTACGTTTACAGGCTCTNTATGAAGATATGCTACGTGAATATTCAGAGTCTAAGCCTTTGGAACTGTCTAACGTACGTG                                                                                                                   ]
[+] EMBL BG931492             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GAAAGTTCAGAAACGATGAATGCTTTGGAGTTGCAGGCAGACATTATTAAACTTCAAGCTACCAATGCTTCTCTAACGGAAGCTGCTCTACTTGATCGAACAAGATTGCATGATCAAGCCATGCGTATAGACCAGTTGGAATCAGAGCATAAAGCTTTACTAGATCGAGTTTCATGTCTTCAGGCAGCTGAAACTGGTGCACAACGTGGTATTGTACGTTTACAGGCTCTTTATGAAGATATGCTACGTGAATATTCAGAGTCTAAGCCTTTGGAACTGTCTAACGTACGTGGACGTAATCGTCAGAGAAGCAGCTCTCGTAATTCTAGAAATAATGATTTTATTACAAATACTAGTTATAATGATAAGTATCGTGCTACATCACGAAATCATGACATAAGGGTAAC]


>consensus_10585#0 CTGGGTTCGACTACCTGTGATGAGATCGTGGGTGCACATTGTTTATGGGTCATATATTAG GACGAAACGGCCGTGCAGCGCTTCCAGGTTTTCATTGGTGGTCTAACTTAGATCGATTCG TGATTCTAATGAAATTTATTGCGTTGATCCAATTTTTAAAATGTTGTGACGAGGTTTTTT TCAAATGCTTTTAGTGAGTACGTTCACATTAAACATACAATTATAAGATAGTACTAACTC CCCCTAAACCTCACTTATTTTTCACCTGGTTCACAAATCACTGTTGCTATCATAATTATT TTATGAATTACTAATCACGTGTTTTACGGTTACCATAATCACTAACAAATTCATAACTTA TTTGATTTGATTTACTCTACCTCCTCTTGGAAAAAAGGTCTGAATTTCCTTTTTAGAGTG TAAAAAAAATTGTATTGCGGTTTTCTGATTTTGATAATTTTTTATTATTGTTGCATAAAT TTTGTAATACTTTCCCCATTTCTCTCTCTCTCTCTCTGTCTACAGAATAATGCTGATCAA AAATTGATAGAAAATTTGCATTGTCAAATTGAAAGCTTGAAACAAGAAATTAAAAGGTTA CAACGTGGTGCATCTACAGTTGAAGAACGAACTGTCAATGGAAATGCTGGTGAATTTCAT ACATCACACAGCTCTCCAAGTCATTTTTACTCAATGGATCCGTATGGAAATGTGGATAAA CAAAATGAAGAAAAATCTAATTCATTACATAATCCATCATACTACAGCGCTCAGTTGCAA GAATTACGTCAAACTGGTGATTTAGAATTAGTCCGCGCACATCTCAGTCTGTCTGAACGA CGTCGACGTGAGCTCGAAAGACGTATAACCGAACTAACTGATGAGTTAGCACGTTCTCGT GCTGAAGCCCGATCCGCGGAAACTAGTCTTTCTGCTGCTCGTCGAACTGAAGCTGCACTA AGAAGACGTCTTCTTGTTGCTATGGATTCTCGAGGTTCACCTAATGGAAATTATGAAATG AATATATCACGAAATTCACATGAATTCTCTACGAACGAAAGTTCAGAAACGATGAATGCT TTGGAGTTGCAGGCAGACATTATTAAACTTCAAGCTACCAATGCTTCTCTAACGGAAGCT GCTCTACTTGATCGAACAAGATTGCATGATCAAGCCATGCGTATAGACCAGTTGGAATCA GAGCATAAAGCTNTACTAGATCGAGTTTCATGTCTTCAGGCAGCTGAAACTGGTGCACAA CGTGGTATTGTACGTTTACAGGCTCTNTATGAAGATATGCTACGTGAATATTCAGAGTCT AAGCCTTTGGAACTGTCTAACGTACGTGGACGTAATCGTCAGAGAAGCAGCTCTCGTAAT TCTAGAAATAATGATTTTATTACAAATACTAGTTATAATGATAAGTATCGTGCTACATCA CGAAATCATGACATAAGGGTAAC



consensusID : consensus_10585#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 508
fasta sequence
                              [AATTCAAACAGAATTAAATAATGACCAAATGGAAAAATTATCAAATTTAAAAGATACTTTAAATTCAGGTGGTCAATTATTGACTAGTGAACAATATGAAACATTGAGTAATGAATTAAATGAAACATTGAAAACATTAACAAACAATCCTGACAATTGTAATATACCATCATCTGGACAATTATCATCATCTACAAATGAAAAAGAAAAATCAAGTCAGAACTATAATGATCTAATTCAAACAGTGAATAAATTAAGAAAAGCATCTGAAACGATTAAACCAATGTCAACTTCATCAGAGTTAAAACTAAGTGATAACGTTGATCAGGCGAATCCGAATGCAAATAATGCTGATCAAAAATTGATAGAAAATTTGCATTGTCAAATTGAAAGCTTGAAACAAGAAATTAAAAGGTTACAACGTGGTGCATCTACAGTTGAAGAACGAACTGTCAATGGAAATGCTGGTGAATTTCATACATCACACAGCTCTCCGAGTCATTTTTAC]

[-] EMBL CD128715             [AATTCAAACAGAATTAAATAATGACCAAATGGAAAAATTATCAAATTTAAAAGATACTTTAAATTCAGGTGGTCAATTATTGACTAGTGAACAATATGAAACATTGAGTAATGAATTAAATGAAACATTGAAAACATTAACAAACAATCCTGACAATTGTAATATACCATCATCTGGACAATTATCATCATCTACAAATGAAAAAGACACATCAAGTCAGAACTATAATGATCTAATTCAAACAGTGAATAAATTAAGAAAAGCAACTGAAACGATTAAACCAATGTCAACTTCATCAGAGTTAAAACTAAGTGATAACGTTGATCAGGCGAATCCGAATGCAAATAATGCTGATCAAAAATTGATAGAAAATTTGCATTGTCAAATTGAAAGCTTGAAACAAGAAATTAAAAGGTTACAAAAAAAAGCATCTACAGTTGAAGAACGAACTGTCAATGGAAATGCTGGTGAATTTCATACATCACACAGCTCTCCGAGTCATTTTTAC]
[+] EMBL CD093597             [     AAACAGAATTAAATAATGAACAAATGGAAAAATTATCAAATTTAAAAGATACTTTAAATTCAGGTGGTCAATTATTGACTAGTGAACAATATGAAACATTGAGTAATGAATTAAATGAAACATTGAAAACATTAACAAACAATCCTGACAATTGTAATATACCATCATCTGGACAATTATCATCATCTACAAATGAAAAAGAAAAATCAAGTCAGAACTATAATGATCTAATTCAAACAGTGAATAAATTAAGAAAAGCATCTGAAACGATTAAACCAATGTCAACTTCATCAGAGTTAAAACTAAGTGATAACGTTGATCAGGCGAATCCGAATGCAAATAATGCTGATCAAAAATTGATAGAAAATTTGCATTGTCAAATTGAAAGCTTGAAACAAGAAATTAAAAGGTTACAACGTGGTGCATCTACAGTTGAAGAACGAACTGTCAATGGATATGCTGGTGAATTTCATACATCACACAG                   ]
[-] EMBL CD069009             [                                                                                                                                                          AATTGTAATATACCATCATCTGGACAATTATCATCATCTACAAATGAAAAAGAAAAATCAAGTCAGAACTATAATGATCTAATTCAAACAGTGAATAAATTAAGAAAAGCATCTGAAACGATTAAACCAATGTCAACTTCATCAGAGTTAAAACTAAGTGATAACGTTGATCAGGCGAATCCGAATGCAAATAATGCTGATCAAAAATTGATAGAAAATTTGCATTGTCAAATTGAAAGCTTGAAACAAGAAATTAAAAGGTTACAACGTGGTGCATCTACAGTTG                                                                    ]


>consensus_10585#1 AATTCAAACAGAATTAAATAATGACCAAATGGAAAAATTATCAAATTTAAAAGATACTTT AAATTCAGGTGGTCAATTATTGACTAGTGAACAATATGAAACATTGAGTAATGAATTAAA TGAAACATTGAAAACATTAACAAACAATCCTGACAATTGTAATATACCATCATCTGGACA ATTATCATCATCTACAAATGAAAAAGAAAAATCAAGTCAGAACTATAATGATCTAATTCA AACAGTGAATAAATTAAGAAAAGCATCTGAAACGATTAAACCAATGTCAACTTCATCAGA GTTAAAACTAAGTGATAACGTTGATCAGGCGAATCCGAATGCAAATAATGCTGATCAAAA ATTGATAGAAAATTTGCATTGTCAAATTGAAAGCTTGAAACAAGAAATTAAAAGGTTACA ACGTGGTGCATCTACAGTTGAAGAACGAACTGTCAATGGAAATGCTGGTGAATTTCATAC ATCACACAGCTCTCCGAGTCATTTTTAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10585#0      CTGGGTTCGACTACCTGTGATGAGATCGTGGGTGCACATTGTTTATGGGTCATATATTAG 60
consensus_10585#1      ------------------------------------------------------------
                                                                                   

consensus_10585#0      GACGAAACGGCCGTGCAGCGCTTCCAGGTTTTCATTGGTGGTCTAACTTAGATCGATTCG 120
consensus_10585#1      ------------------------------------------------------------
                                                                                   

consensus_10585#0      TGATTCTAATGAAATTTATTGCGTTGATCCAATTTTTAAAATGTTGTGACGAGGTTTTTT 180
consensus_10585#1      --------------------AATTCAAACAGAATTAAATAATGACCAAATGGAAAAATTA 40
                                              *  * *  * **  * ****     * *      ** 

consensus_10585#0      TCAAATGCTTTTAGTGAGTACGTTCACATTAAACATACAATTATAAGATAGTACTAACTC 240
consensus_10585#1      TCAAAT----TTAAAAGATACTTTAAATTCAGGTGGTCAATTATTGACTAGTG--AACAA 94
                       ******    ***     *** ** *  * *      *******    ****   ***  

consensus_10585#0      CCCCTAAACCTCACTTATTTTTCACCTGGTTCACAAATCACTGTTGCTATCATAATTATT 300
consensus_10585#1      TATGAAA----CATTGAGTAATGAATTAAATGAAACATTGAAAACATTAACA-AACAATC 149
                            **    ** * * *  * *  *   * * * **         ** ** **  ** 

consensus_10585#0      TTATGAATTACTAATCACGTGTTTTACGGTTACCATAATCACTAACAAATTCATAACTTA 360
consensus_10585#1      CTGACAATTGTAATATACCATCATCTGGACAATTATCATCATCTACAAATGAAAAAGAAA 209
                        *   ****   *   **     *   *   *  ** ****   ******  * **   *

consensus_10585#0      TTTGATTTGATTTACTCTACCTCCTCTTGGAAAAAAGGTCTGAATTTCCTTTTTAGAGTG 420
consensus_10585#1      ---AATCAAGTCAGAACTAT-------------AATGATCTAATTCAAACAGTGAATAAA 253
                           **    *     ***              ** * *** * *       * *     

consensus_10585#0      TAAAAAAAATTGTATTGCGGTTTTCTGATTTTGATAATTTTTTATTATTGTTGCATAAAT 480
consensus_10585#1      TTAAGAAAAGCATCTGAAACGATTAAACCAATGTCAACTTC--ATCAGAGTTA---AAAC 308
                       * ** ****   * *       **       **  ** **   ** *  ***    *** 

consensus_10585#0      TTTGTAATACTTTCCCCATTTCTCTCTCTCTCTCTCTGTCTACAGAATAATGCTGATCAA 540
consensus_10585#1      TAAGTGATAA------CGTTGATCAGGCGA---ATCCGAATGCA-AATAATGCTGATCAA 358
                       *  ** ***       * **  **   *      ** *  * ** ***************

consensus_10585#0      AAATTGATAGAAAATTTGCATTGTCAAATTGAAAGCTTGAAACAAGAAATTAAAAGGTTA 600
consensus_10585#1      AAATTGATAGAAAATTTGCATTGTCAAATTGAAAGCTTGAAACAAGAAATTAAAAGGTTA 418
                       ************************************************************

consensus_10585#0      CAACGTGGTGCATCTACAGTTGAAGAACGAACTGTCAATGGAAATGCTGGTGAATTTCAT 660
consensus_10585#1      CAACGTGGTGCATCTACAGTTGAAGAACGAACTGTCAATGGAAATGCTGGTGAATTTCAT 478
                       ************************************************************

consensus_10585#0      ACATCACACAGCTCTCCAAGTCATTTTTACTCAATGGATCCGTATGGAAATGTGGATAAA 720
consensus_10585#1      ACATCACACAGCTCTCCGAGTCATTTTTAC------------------------------ 508
                       ***************** ************                              

consensus_10585#0      CAAAATGAAGAAAAATCTAATTCATTACATAATCCATCATACTACAGCGCTCAGTTGCAA 780
consensus_10585#1      ------------------------------------------------------------
                                                                                   

consensus_10585#0      GAATTACGTCAAACTGGTGATTTAGAATTAGTCCGCGCACATCTCAGTCTGTCTGAACGA 840
consensus_10585#1      ------------------------------------------------------------
                                                                                   

consensus_10585#0      CGTCGACGTGAGCTCGAAAGACGTATAACCGAACTAACTGATGAGTTAGCACGTTCTCGT 900
consensus_10585#1      ------------------------------------------------------------
                                                                                   

consensus_10585#0      GCTGAAGCCCGATCCGCGGAAACTAGTCTTTCTGCTGCTCGTCGAACTGAAGCTGCACTA 960
consensus_10585#1      ------------------------------------------------------------
                                                                                   

consensus_10585#0      AGAAGACGTCTTCTTGTTGCTATGGATTCTCGAGGTTCACCTAATGGAAATTATGAAATG 1020
consensus_10585#1      ------------------------------------------------------------
                                                                                   

consensus_10585#0      AATATATCACGAAATTCACATGAATTCTCTACGAACGAAAGTTCAGAAACGATGAATGCT 1080
consensus_10585#1      ------------------------------------------------------------
                                                                                   

consensus_10585#0      TTGGAGTTGCAGGCAGACATTATTAAACTTCAAGCTACCAATGCTTCTCTAACGGAAGCT 1140
consensus_10585#1      ------------------------------------------------------------
                                                                                   

consensus_10585#0      GCTCTACTTGATCGAACAAGATTGCATGATCAAGCCATGCGTATAGACCAGTTGGAATCA 1200
consensus_10585#1      ------------------------------------------------------------
                                                                                   

consensus_10585#0      GAGCATAAAGCTNTACTAGATCGAGTTTCATGTCTTCAGGCAGCTGAAACTGGTGCACAA 1260
consensus_10585#1      ------------------------------------------------------------
                                                                                   

consensus_10585#0      CGTGGTATTGTACGTTTACAGGCTCTNTATGAAGATATGCTACGTGAATATTCAGAGTCT 1320
consensus_10585#1      ------------------------------------------------------------
                                                                                   

consensus_10585#0      AAGCCTTTGGAACTGTCTAACGTACGTGGACGTAATCGTCAGAGAAGCAGCTCTCGTAAT 1380
consensus_10585#1      ------------------------------------------------------------
                                                                                   

consensus_10585#0      TCTAGAAATAATGATTTTATTACAAATACTAGTTATAATGATAAGTATCGTGCTACATCA 1440
consensus_10585#1      ------------------------------------------------------------
                                                                                   

consensus_10585#0      CGAAATCATGACATAAGGGTAAC 1463
consensus_10585#1      -----------------------
                                              




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)