cluster # 10587

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Schistosoma mansoni
cluster # 10587 cluster # 10587 Sequences # 18 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10587#0 length = 657 sequences # 7

consensus_10587#1 length = 415 sequences # 5
consensus_10587#2 length = 382 sequences # 6

consensusID : consensus_10587#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 657
fasta sequence

                              [AAAACTAAATGGCTTCAAGAGATAACCGTCTATCCGTTTATGTTGGTAATCTTCCTCCGAATACTATACAAGGGCATTTCGATTACATATTTTCTGGTTGTGATATAGAGAGTGTTAGATTAGTGAGAGACAAACAGACAGACGAATTCAAAGGGTATGCCTATGTAGATTTTAAAAATGAACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGGTATGTCACTGGTTCTCATATTACTTTTCTGTTTAGATTGTTGATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGACCTGGACGTGGTGGTGGTCATGGTCAATGGGGTATGAACAATGGATATGGAAGTCAGGGACGTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCAAGGACGTGGTAGACCTAGCATGGGTGGTGGACGGATGGAAAGTTATGGACGTCCAAATAGAGGTGGAATGGGTGGATTCGGTGGACAACGACAAAGTTACCATCCCCCAGGATTGTCACGAGAGCAATTAAATGAACCTATTACTAAGAATCCTCAGTCAAATTCTACTGATTCAACTAGTAGTGGTTCAGGTGGTGATCGACCTAAACTAAACCTTAAAATTAGAGAGGCCCNCTGTAATACAANTGATGATC]

[+] EMBL CD189835             [AAAACTAAATGGCTTCAAGAGATAACCGTCTATCCGTTTATGTTGGTAATCTTCCTCCGAATACTATACAAGGGCATTTCGATTACATATTTTCTGGTTGTGATATAGAGAGTGTTAGATTAGTGAGAGACAAACAGACAGACGAATTCAAAGGGTATGCCTATGTAGATTTTAAAAATGAACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGGTATGTCACTGGTTCTCATATTACTTTTCTGTTTAGATTGTTGATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGACCTGGACGTGGTGGTGGTCATGGTCAATGGGGTATGAACAATGGATATGGAAGTCAGGGACGTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCAAGGACGTGGTAGACCTAGCATGGGTGGTGGACGGATGGAAAGTTATGGACGTCCAAATAGAGGTGGAATGGGTGGATTCGGTGGACAACGACAAAG                                                                                                                                                              ]
[+] EMBL CD133313             [AAAACTAAATGGCTTCAAGAGATAACCGTCTATCCGTTTATGTTGGTAATCTTCCTCCGAATACTATACAAGGGCATTTCGATTACATATTTTCTGGTTGTGAT    AGAGTGTTAGATTAGTGAGAGACAAACAGACAGACGAATTCAAAGGGTATGCCTATGTAGATTTTAAAAATGAACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGGTATGTCACTGGTTCTCATATTACTGTTCTGTTTAGATTGTTGATGGACGCTCTCTTCGAGT                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD115763             [                                                                                                        ATAGAGAGTGTTAGATTAGTGAGAGACAAACAGACAGACGAATTCAAAGGGTATGCCTATGTAGATTTTAAAAATGAACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGGTATGTCACTGGTTCTCATATTACTTTTCTGTTTAGATTGTTGATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGACCTGGACGTGGTGGTGGTCATGGTCAATGGGGTATGAACAATGGATATGGAAGTCAGGGACGTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCAAGGACGTGGTAGACCTAGCATGGGTGGTGGACGGATGGAAAGTTATGGACGTCCAAATAGAGGTGGAATGGGTGGATTCGGTGGACAACGACAAAGTTACCATCCCCCAGGATTGTCACGAGAGCAATTAAATGAACCT                                                                                                                   ]
[+] EMBL CD098240             [                                                                                                                   TAGATTAGTGAGAGACAAACAGACAGACGAATTCAAAGGGTATGCCTATGTAGATTTTAAAAATGAACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGGTATGTCACTGGTTCTCATATTACTTTTCTGTTTAGATTGTTGATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGACCTGGACGTGGTGGTGGTCATGGTCAATGGGGTATGAACAATGGATATGGAAGTCAGGGACGTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCAAGGACGTGGTAGACCTAGC                                                                                                                                                                                                                                           ]
[+] EMBL CD171239             [                                                                                                                                                                                                                                                                                                        AGACCTGGACGTGGTGGTGGTCATGGTCAATGGGGTGTGAACAATGGATATGGAAGTCAGGGACGTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCAAGGACGTGGTAGACCTAGCATGGGTGGTGGACGGATGGAAAGTTATGGACGTCCAAATAGAGGTGGAATGGGTGGATTCGGTGGACAACGACAAAGTTACCATCCCCCAGGATTGTCACGAGAGCAATTAAATGAACCTATTACTAAGAATCCTCAGTCAAATTCTACTGATTCAACTAGTAGTGGTTCAGGTGGTGATCGACCTAAACTAAACC                                       ]
[-] EMBL BG931732             [                                                                                                                                                                                                                                                                                                                                                                TCAGGGACGTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCAAGGACGTGGTAGACCTAGCATGGCTGGTGGACGGATGGAAAGTTATGGACGTCCAAATAGAGGTGGAATGGGTGGATTCGGTGGACAACGACAAAGTTACCATCCCCCAGGATTGTCACGAGAGCAATTAAATGAACCTATTACTAAGAATCCTCAGTCAAATTCTACTGATTCAAATAGTAGTGGTTCAGGTGGTGATCGACCTAAACTAAACCTTAAAATTAGAGAG                         ]
[+] EMBL CD132621             [                                                                                                                                                                                                                                                                                                                                                                                                                                                              TATGGACGTCCAAATAGAGGTGGAATGGGTGGATTCGGTGGACAACGACAAAGTTACCATCCCCCAGGATTGTCACGAGAGCAATTAAATGAACCTATTACTAAGAATCCTCAGTCAAATTCTACTGATTCAACTAGTAGTGGTTCAGGTGGTGATCGACCTAAACTAAACCTTAAAATTAGAGAGGCCCNCTGTAATACAANTGATGATC]




>consensus_10587#0
AAAACTAAATGGCTTCAAGAGATAACCGTCTATCCGTTTATGTTGGTAATCTTCCTCCGA
ATACTATACAAGGGCATTTCGATTACATATTTTCTGGTTGTGATATAGAGAGTGTTAGAT
TAGTGAGAGACAAACAGACAGACGAATTCAAAGGGTATGCCTATGTAGATTTTAAAAATG
AACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGGTATGTCACTGGTTCTCATATT
ACTTTTCTGTTTAGATTGTTGATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGAC
CTGGACGTGGTGGTGGTCATGGTCAATGGGGTATGAACAATGGATATGGAAGTCAGGGAC
GTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCAAGGACGTGGTAGACCTA
GCATGGGTGGTGGACGGATGGAAAGTTATGGACGTCCAAATAGAGGTGGAATGGGTGGAT
TCGGTGGACAACGACAAAGTTACCATCCCCCAGGATTGTCACGAGAGCAATTAAATGAAC
CTATTACTAAGAATCCTCAGTCAAATTCTACTGATTCAACTAGTAGTGGTTCAGGTGGTG
ATCGACCTAAACTAAACCTTAAAATTAGAGAGGCCCNCTGTAATACAANTGATGATC

consensusID : consensus_10587#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 415
fasta sequence

                              [AAATGGCTTCAAGAGATAACCGTCTATCCGTTTATGTTGGTAATCTTCCTCCGAATACTATACAAGGGCATTTCGATTACATATTTTCTGGTTGTGATATAGAGAGTGTTAGATTAGTGAGAGACAAACAGACAGACGAATTCAAAGGGTATGCCTATGTAGATTTTAAAAATGAACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGATTGTTGATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGACCTGGACGTGGTGGTGGTCATGGTCAATGGGGTATGAACAATGGATATGGAAGTCAGGGACGTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCAAGGACGTGGTAGACCTAGCAT-GTGTGACGGATGAAAGTTCCGTGAACCTCGGTA]

[-] EMBL CD128216             [AAATGGCTTCAAGAGATAACCGTCTATCCGTTTATGTTGGTAATCTTCCTCCGAATACTATACAAGGGCATTTCGATTACATATTTTCTGGTTGTGATATAGAGAGTGTTAGATTAGTGAGAGACAAACAGACAGACGAATTCAAAGGGTATGCCTATGTAGATTTTAAAAATGAACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGATTGTTGATGGACGCTCTCTTCGGGTAAATCTAGCAGGTGAAAGACCTGGACGTGGTGGTGGTCATGGTCAATGGGGTATGAACAATGGATACGGAAGTCAGGGACGTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCAAGGACGTGGTAGACCTAGCATGGTGTG                            ]
[-] EMBL CD065617             [                TATCCGTCTATCCGTTTATGTTGGTAATCTTCCTCCGAATACTATACAAGGGCATTTCGATTACATATTTTCTGGTTGTGATATAGAGAGTGTTAGATTAGTGAGAGACAAACAGGCAGACGAATTCAAAGGGTATGCCTATGTAGATTTTAAAAATGAACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGATTGTTGATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGACCTGGACGTGGTGGTGGTCATGGTCAATGGGGTATGAACAATGGATATGGAAGTCAGGGACGTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCAAGGACGTGGTAGACCTAGCAT GTGTGACGGATGAAAGTTCCGTGAACCTCGGTA]
[-] EMBL CD065740             [                TAACCGTCTATCCGTTTATGTTGGTAATCTTCCTCCGAATACTATACAAGGGCATTTCGATTACATATTTTCTGGTTGTGATATAGAGAGTGTTAGATTAGTGAGAGACAAACAGACAGACGAATTCAAAGGGTATGCCTATGTAGATTTTAAAAATGAACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGATTGTTGATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGACCTGGACGTGGTGGTGGTCATGGTCAATGGGGTATGAACAATGGATATGGAAGTCAGGGACGTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCAAGGACGTGGTAGACCTAGCAT GTGgt                            ]
[-] EMBL CD157360             [                                    TTGGTAATCTTCCTCCGAATACTATACAAGGGCATTTCGATTACATATTTTCTGGTTGTGATATAGAGAGTGTTTGATTAGTGAGAGACAAACAGACAGACGAATTCAAAGGGTATGCCTATGTAGATTTTAAAAATGAACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGATTGTTGATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGACCTGGACGTGGTGGTGGACATGGTCAATGGGGTATGAACAATGGATATGGAAGTCAGGGACGTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCAAGGACGTGGTAGACCTAG                                     ]
[-] EMBL CD157358             [                                    TTGGTAATCTTCCTCCGAATACTATACAAGGGCATTTCGATTACATATTTTCTGGTTGTGATATAGAGAGTGTTAGATTAGTGAGAGACAAACAGACAGACGAATTCAAAGGGTATGCCTATGTAGATTTTAAAAATGAACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGATTGTTGATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGACCTGGACGTGGTGGTGGTCATGGTCAATGGGGTATGAACAATGGATATGGAAGTCAGGGACGTGGCGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCA                                                       ]




>consensus_10587#1
AAATGGCTTCAAGAGATAACCGTCTATCCGTTTATGTTGGTAATCTTCCTCCGAATACTA
TACAAGGGCATTTCGATTACATATTTTCTGGTTGTGATATAGAGAGTGTTAGATTAGTGA
GAGACAAACAGACAGACGAATTCAAAGGGTATGCCTATGTAGATTTTAAAAATGAACAAT
CCCTCCAGAAAGCATTAACTGTCGACGGTGCGATTGTTGATGGACGCTCTCTTCGAGTAA
ATCTAGCAGGTGAAAGACCTGGACGTGGTGGTGGTCATGGTCAATGGGGTATGAACAATG
GATATGGAAGTCAGGGACGTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATC
AAGGACGTGGTAGACCTAGCATGTGTGACGGATGAAAGTTCCGTGAACCTCGGTA

consensusID : consensus_10587#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 382
fasta sequence

                              [ATTGCGGAAGGACGGTCGGGGGTTCCATCCATTTCGATTACACATTTTCTGGTTGTGATATAGAGGGTGTTAGATTAGTGAGAGACAAACAGACAGACGAATTCAAAGGGTATGCCTATGTAGATTTTAAAAATGAACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGATTGTTGATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGACCTGGACGTG-GTGGTGGTCATGGTCAATGGGGTATGAACAATGGATATGGAAGTCAGGGACGTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCAAGGACGTGGTAGACCTAGCATGGGTGGTGGACGGTCGGGGGTTCCATGGCTTTCCTCCAG]

[-] EMBL CD072146             [ATTGCGGAAGGACGGTCGGGGGTTCCATCCATTTCGATTACACATTTTCTGGTTGTGATATAGAGGGTGTTAGATTAGTGAGAGACAAACAGACAGACGAATTCAAAGGGTATGCCTATGTAGATTTTAAAAATGAACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGATTGTTGATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGACCTGGACGTG GTGGTGGTCATGGTCAATGGGGTATGAACAATGGATATGGAAGTCAGGGACGTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCAAGGACGTGGTAGACCTAGCATGGGTGGTGGACGGTCGGGGGTTCCATGGCTTTCCTCCAG]
[-] EMBL CD111247             [                                                                                  AGACAAACAGACAGACGAATTCAAAGGGTATGCCTATGTAGATTTTAAAAATGAACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGATTGTTGATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGACCTagtt                                                                                                                                                              ]
[+] EMBL CD126770             [                                                                                            ccgGACGCA TC AAGGGTAT CCTATGTAGATTTTAAAAATG ACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGATTGTTGATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGACCTGGACGTGAATGGTc                                                                                                                                                    ]
[-] EMBL CD072161             [                                                                                                     TTCAAAGGGTATGCCTATGTAGA TTTAAAAATGAACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGATTGTTGATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGACCTGGACGTG GTGGTGGTCATGGTCAATGGGGTATGAACAATGGATATGGAAGTCAGGGACGTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCAAGGACGTGGTAGACCTAGCATGGGTGGTGGACGGTCGGGGGTTCCATGGC          ]
[-] EMBL CD181833             [                                                                                                            GGTATGCCTATGTAGATTTTAAAAATGAACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGATTGTTGATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGACCTGGACGTG GTG                                                                                                                                                       ]
[+] EMBL CD065579             [                                                                                                                                                                                           CTCTCTTCGAGTAAATCTAGCAGGTGAAAGACCTGGACGTG GTGGTGGTCATGGTCAATGGGGTATGAACAATGGATATGGAAGTCAGGGACGTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCAAGGACGCGGTAGACCTAGCATGGGTGGT                                ]




>consensus_10587#2
ATTGCGGAAGGACGGTCGGGGGTTCCATCCATTTCGATTACACATTTTCTGGTTGTGATA
TAGAGGGTGTTAGATTAGTGAGAGACAAACAGACAGACGAATTCAAAGGGTATGCCTATG
TAGATTTTAAAAATGAACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGATTGTTG
ATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGACCTGGACGTGGTGGTGGTCATG
GTCAATGGGGTATGAACAATGGATATGGAAGTCAGGGACGTGGTGGTTTCGGGAATCAAG
GACGTGGTGGCTTTGGAAATCAAGGACGTGGTAGACCTAGCATGGGTGGTGGACGGTCGG
GGGTTCCATGGCTTTCCTCCAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10587#0      AAAACTAAATGGCTTCAAGAGATAACCGTCTATCCGTTTATGTTGGTAATCTTCCTCCGA 60
consensus_10587#1      ------AAATGGCTTCAAGAGATAACCGTCTATCCGTTTATGTTGGTAATCTTCCTCCGA 54
consensus_10587#2      -----------------------------------------ATTGCGGAAGGACGGTCGG 19
                                                                 ***   *    *   ** 

consensus_10587#0      ATACTATACAAGGGCATTTCGATTACATATTTTCTGGTTGTGATATAGAGAGTGTTAGAT 120
consensus_10587#1      ATACTATACAAGGGCATTTCGATTACATATTTTCTGGTTGTGATATAGAGAGTGTTAGAT 114
consensus_10587#2      GGGTTCCATC----CATTTCGATTACACATTTTCTGGTTGTGATATAGAGGGTGTTAGAT 75
                           *  *      ************* ********************** *********

consensus_10587#0      TAGTGAGAGACAAACAGACAGACGAATTCAAAGGGTATGCCTATGTAGATTTTAAAAATG 180
consensus_10587#1      TAGTGAGAGACAAACAGACAGACGAATTCAAAGGGTATGCCTATGTAGATTTTAAAAATG 174
consensus_10587#2      TAGTGAGAGACAAACAGACAGACGAATTCAAAGGGTATGCCTATGTAGATTTTAAAAATG 135
                       ************************************************************

consensus_10587#0      AACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCGGTATGTCACTGGTTCTCATATT 240
consensus_10587#1      AACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCG---------------------- 212
consensus_10587#2      AACAATCCCTCCAGAAAGCATTAACTGTCGACGGTGCG---------------------- 173
                       **************************************                      

consensus_10587#0      ACTTTTCTGTTTAGATTGTTGATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGAC 300
consensus_10587#1      --------------ATTGTTGATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGAC 258
consensus_10587#2      --------------ATTGTTGATGGACGCTCTCTTCGAGTAAATCTAGCAGGTGAAAGAC 219
                                     **********************************************

consensus_10587#0      CTGGACGTGGTGGTGGTCATGGTCAATGGGGTATGAACAATGGATATGGAAGTCAGGGAC 360
consensus_10587#1      CTGGACGTGGTGGTGGTCATGGTCAATGGGGTATGAACAATGGATATGGAAGTCAGGGAC 318
consensus_10587#2      CTGGACGTGGTGGTGGTCATGGTCAATGGGGTATGAACAATGGATATGGAAGTCAGGGAC 279
                       ************************************************************

consensus_10587#0      GTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCAAGGACGTGGTAGACCTA 420
consensus_10587#1      GTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCAAGGACGTGGTAGACCTA 378
consensus_10587#2      GTGGTGGTTTCGGGAATCAAGGACGTGGTGGCTTTGGAAATCAAGGACGTGGTAGACCTA 339
                       ************************************************************

consensus_10587#0      GCATGGGTGGTGGACGGATGGAAAGTTATGGACGTCCAAATAGAGGTGGAATGGGTGGAT 480
consensus_10587#1      GCATGTGTGACGGAT-----GAAAGTTCCGTGAACCTCGGTA------------------ 415
consensus_10587#2      GCATGGGTGGTGGACGG-TCGGGGGTTCCATGGCTTTCCTCCAG---------------- 382
                       ***** ***  ***      *   ***                                 

consensus_10587#0      TCGGTGGACAACGACAAAGTTACCATCCCCCAGGATTGTCACGAGAGCAATTAAATGAAC 540
consensus_10587#1      ------------------------------------------------------------
consensus_10587#2      ------------------------------------------------------------
                                                                                   

consensus_10587#0      CTATTACTAAGAATCCTCAGTCAAATTCTACTGATTCAACTAGTAGTGGTTCAGGTGGTG 600
consensus_10587#1      ------------------------------------------------------------
consensus_10587#2      ------------------------------------------------------------
                                                                                   

consensus_10587#0      ATCGACCTAAACTAAACCTTAAAATTAGAGAGGCCCNCTGTAATACAANTGATGATC 657
consensus_10587#1      ---------------------------------------------------------
consensus_10587#2      ---------------------------------------------------------