cluster # 10588

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Schistosoma mansoni
cluster # 10588 cluster # 10588 Sequences # 18 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10588#0 length = 1958 sequences # 17

consensus_10588#1 length = 358 sequences # 1

consensusID : consensus_10588#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 1958
fasta sequence

                              [CGTTCCAATGAAATCAAAAGATTCAGAGGTACTAAACGTGTCGATTTGCTATTAGAAGCAGATGAGAATTGGCGGAAAGCGCGTTTCAGAGCTGATCATTTAAATAAAGTAAAGAACTTCTGCAGCAAAACTATTGCTAAGAAGATTAAAGAAAACAAAGACGGCCCGGATTTTGATTCTAATTTGTTTGATGATGTATTTGATCGCCTTGATTCACTTGTAGAAGCTGATTTGCAGTCCTTGGGTGTAGCACAGTTAAAGTCTTTGTCCTGTCTTATTGATGAAGAAACAAAGAGAAATGCAGCCTTCGTAGTGGAGTTCGAGTCTGTAAGACAGCAGCAATTGTATGAGATTGGTAATCTCCTACACCCAGATGTACCGATAAGTAACAATGAGGAAGACAATTTGGTTATTCGAACTTTCGGAAAGAGCGATTTTCGAAAACCTTTATCTCATGTTGATTTAGTGATAATGGTAGATGGTTTTGACGGTGAACGTGGAAGTACAGTAGCCGGAGGTCGTGGATATTTTCTAAAGGGGCCGCTAGTCTTCCTGGAACAAGCAATCATAAACTTAGCTCTACAAATGCTAGATGAACGGGGTTTTACGCCACTGTACACTCCATTTTTTATGCGC-AAGGAGGCTATGCGAGCAGTCGCTCAGTTAAGTCAGTTTGATGAAGAGTTGTACAAAGTTACAGGCCGTCGTGAAC-TTAATGTCACAACCAATCATGATTCACAAACAAATGAAAGTGGAGAGGAAGAGAAATATTTAATTGCAACATCCGAACAACCAATCGCTGCATTTCATCAAGACGAATGGTTACCCATTGATCAATTACCGATTAAGTATGCAGGGATCTCGACTTGTTTCAGACAAGAAGTTGGTAGTCATGGTCGTGATACTCGTGGGATATTTCGTGTTCATCAGTTCGAAAAGGTTGAACAGTTTTGTATTACTAGTCCGCACGATAATCTGTCATGGGAGATGTTTGATCATATGATTTCTAATGCTGAAGCATTTCACCAGGCTCTGAAGTTGCCTTATCGTGTTGTTTCCATTGTATCGGGTGAGCTAAACAATGCTGCGTCTATGAAGTATGATTTAGAAGGTTGGTTCCCTGGGTCCGGAGCCTTTAGGGAACTTGTATCTTGTAGTAATTGTTTGGACTATCAATCTCGTCGGTTAGCAATTCGTTTCGGTCAAACAAAAAAAA-TGAACAGAAGTGTTGAATATGTACATATGCTC-AATGCAACGATGTGTGCAACCACTCGAGTTATTTGTGCGATTCTAGAGAATTATCAAACAGAACATGGGATTATTGTTCCTGATGTTTTAAAATCATTCATGCCCCAAAAATATCAGAAATTTATACCATTCAAAGGACATGAAGATAAAATACCTATCAGCATTGATAATGTGCCAGAGACAATTTACAGTCCATCCAATGCAAAATTTCACGATGAAACATCGTTCAATGAGCTGAATGAAAGAATAAATGCTTTAACTGGAGCCACAGAATCTGGTCTCGTCAATGCTATTTCTCAGATATCTGAAGTTCAAAAACGAATCGAAGATAAGTTAAATACACTAAGTTTATTCACCACAAGTAATCACATTGAAAAAGATGTCCGTAACAAAAATTNTGCTGTTGTTCATCCTGTAGAAGATAAAAACGACCTTGAAGTTGAAAATAAAGGTACAATTGATAATGAGTCAGTGAGTTTACAATCAACTACTCCAGAACCAACTGATTTTAAGAAGAAGCGGAAGAGAAAACCAAAAAAGAAACAATCGGATTAGAATTTTATTTTACTGTGGTGCTCAGCTAATATTGCATATTAATGTTTTATTGTTTTGACTCACGCTTGCATATAAATATAAATCTTGTCTGTGGTGTTAAAAAAAAAAAAAAAAAAAAAAAAAACATCCATGCAGCTGCATTACCGTACTGCGTA]

[+] EMBL CD096826             [CGTTCCAATGAAATCAAAAGATTCAGAGGTACTAAACGTGTCGATTTGCTATTAGAAGCAGATGAGAATTGGCGGAAAGCGCGTTTCAGAGCTGATCATTTAAATAAAGTAAAGAACTTCTGCAGCAAAACTATTGCTAAGAAGATTAAAGAAAACAAAGACGGCCCGGATTTTGATTCTAATTTGTTTGATGATGTATTTGATCGCCTTGATTCACTTGTAGAAGCTGATTTGCAGTCCTTGGGTGTAGCACAGTTAAAGTCTTTGTCCTGTCTTATTGATGAAGAAACAAAGAGAAATGCAGCCTTCGTAGTGGAGTTCGAGTCTGTAAGACAGCAGCAATTGTATGAGATTGGTAATCTCCTACACCCAGATGTACCGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD117921             [                                                                                               TCATTTAAATAAAGTAAAGAACTTCTGCAGCAAAACTATTGCTAAGAAGATTAAAGAAAACAAAGACGGCCCGGATTTTGATTCTAATTTGTTTGATGATGTATTTGATCGCCTTGATTCACTTGTAGAAGCTGATTTGCAGTCCTTGGGTGTAGCACAGTTAAAGTCTTTGTCCTGTCTTATTGATGAAGAAACAAAGAGAGATGCAGCCTTCGTAGTGGAGTTCGAGTCTGTAAGACAGCAGCAATTGTATGAGATTGGTAATCTCCTACACCCAGATGTACCGATAAGTAACAATGAGGAAGACAATTTGGTTATTCGAACTTTCGGAAAGAGCGATTTTCGAAAACCTTTATCTCATGTTGATTTAGTGATAATGGTAGATGGTTTTGACCGTGAACGTGGAAGTACAGTAGCCGGAGGTCGTTGATATTTTCTAAAGGGGCCGCTAGTCTTCCTGGAACCAGCAATCATAAACTTAGCTCTACAAATGCTAAATGAACGGGGTTTTACGCCACTGTACACTNCATTTTTTATGCGCAAAGGA GTTATGCGAGCACTCGCTCCATTTAGTCAGTTTGATGAAGAGTTGT CCAAGTTACAGGCCGTCGTGAACTTTAATGTCCCACCCAATCATGATTCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD162241             [                                                                                                                                                                                                                                                                                   TATTGATGAAGAAACAAAGAGAAATGCAGCCTTCGTAGTGGAGTTCGAGTCTGTAAGACAGCAGCAATTGTATGAGATTGGTAATCTCCTACACCCAGATGTACCGATAAGTAACAATGAGGAAGACAATTGGGTTATTCGAACTTTCGGAAAGAGCGATTTTCGAAAACCTTTATCTCATGTTGATTTAGTGATAATGGTAGATGGTTTTGACGGTGAACGTGGAAGTACAGTAGCCGGAGGTCGTGGATATTTTCTAAAGGGGCCGCTAGTCTTCCTGGAACAAGCAATCATAAACTTAGCTCTACAAATGCTAGATGAACGGGGTTTTACGCCACTGTACACTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD123576             [                                                                                                                                                                                                                                                                                     TTGATGAAGAAACAAAGAGAAATGCAGCCTTCGTGGTGGAGTTCGAGTCTGTAAGACAGCAGCAATTGTATGAGATTGGTAATCTCCTACACCCAGATGTACCGATAAGTAACAATGAGGAAGACAATTTGGTTATTCGAACTTTCGGAAAGAGCGATTTTCGAAAACCTTTATCTCATGTTGATTTAGTGATAATGGTAGATGGTTTTGACGGTGAACGTGGAAGTACAGTAGCCGGAGGTCGTGGATATTTTCTAAAGGGGCCGCTAGTCTTCCTGGAACAAGCAATCATAAACTTAGCTCTACAAATGCTAGATGAACGGGGTTTTACGCCACTGTACACTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD137152             [                                                                                                                                                                                                                                                                                                                                 GAGTCTGTAAGACAGCAGCAATTGTATGAGATTGGTAATCTCCTACACCCAGATGTACCGATAAGTAACAATGAGGAAGACAATTTGGTTATTCGAACTTTCGGAAAGAGCGATTTTCGAAAACCTTTATCTCATGTTGATTTAGTGATAATGGTAGATGGTTTTGACGGTGAACGTGGAAGTACAGTAGCCGGAGGTCGTGGATATTTTCTAAAGGGGCCGCTAGTCTTCCTGGAACAAGCAATCATAAACTTAGCTCTACAAATGCTAGATGAACGGGGTTTTACGCCACTGTACACTCCATTTTTTATGCGC AAGGAGGCTATGCGAGCAGTCGCTCAGTTAAGTCAGTTTGATGAAGAGTTGTACAAAGTTACAGGCCGTCGTGAAC TTAATGTCACAACCAATCATGATTCACAAACAAATGAAAGTGGAGAGGAAGAGAAATATTTAATTGCAACATCCGAACAACCAATCGCTGCATTTCATCAAGACGAATGGTTACCCATTGATCAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD136696             [                                                                                                                                                                                                                                                                                                                                 GAGTCTGTAAGACAGCAGCAATTGTATGAGATTGGTAATCTCCTACACCCAGATGTACCGATAAGTAACAATGAGGAAGACAATTTGGTTATTCGAACTTTCGGAAAGAGCGATTTTCGAAAACCTTTATCTCATGTTGATTTAGTGATAATGGTAGATGGTTTTGACGGTGAACGTGGAAGTACAGTAGCCGGAGGTCGTGGATATTTTCTAAAGGGGCCGCTAGTCTTCCTGGAACAAGCAATCATAAACTTAGCTCTACAAATGCTAGATGAACGGGGTTTTACGCCACTGTACACTCCATTTTTTATGCGC AAGGAGGCTATGCGAGCAGTCGCTCAGTTAAGTCAGTTTGATGAAGAGTTGTACAAAGTTACAGGCCGTCGTGAAC TTAATGTCACAACCAATCATGATTCACAAACAAATGAAAGTGGAGAGGAAGAGAAATATTTAATTGCAACATCCGGACAACCAATCGCTGCATTTCATCAAGACGAATGGTTACCCATTGATCAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD136761             [                                                                                                                                                                                                                                                                                                                                  AGTCTGTAAGACAGCAGCAATTGTATGAGATTGGTAATCTCCTACACCCAGATGTACCGATAAGTAACAATGAGGAAGACAATTTGGTTATTCGAACTTTCGGAAAGAGCGATTTTCGAAAACCTTTATCTCATGTTGATTTAGTGATAATGGTAGATGGTTTTGACGGTGAACGTGGAAGTACAGTAGCCGGAGGTCGTGGATATTTTCTAAAGGGGCCGCTAGTCTTCCTGGAACAAGCAATCATAAACTTAGCTCTACAAATGCTAGATGAACGGGGTTTTACGCCACTGTACACTCCATTTTTTATGCGC AAGGAGGCTATGCGAGCAGTCGCTCAGTTAAGTCAGTTTGATGAAGAGTTGTACAAAGTTACAGGCCGTCGTGAAC TTAATGTCACAACCAATCATGATTCACAAACAAATGAAAGTGGAGAGGAAGAGAAATATTTAATTGCAACATCCGAACAACCAATCGCTGCATTTCATCAAGACGAATGGTTACCCATTGATCAATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD137206             [                                                                                                                                                                                                                                                                                                                                  AGTCTGTAAGACAGCAGCAATTGTATGAGATTGGTAATCTCCTACACCCAGATGTACCGATAAGTAACAATGAGGAAGACAATTTGGTTATTCGAACTTTCGGAAAGAGCGATTTTCGAAAACCTTTATCTCATGTTGATTTAGTGATAATGGTAGATGGTTTTGACGGTGAACGTGGAAGTACAGTAGCCGGAGGTCGTGGATATTTTCTAAAGGGGCCGCTAGTCTTCCTGGAACAAGCAATCATAAACTTAGCTCTACAAATGCTAGATGAACGGGGTTTTACGCCACTGTACACTCCATTTTTTATGCGC AAGGAGGCTATGCGAGCAGTCGCTCAGTTAAGTCAGTTTGATGAAGAGTTGTACATAGTTACAGGCCGTCGTGAAC TTAATGTCACAACCAATCATGATTCACAAACAAATGAAAGTGGAGAGGAAGAGAAATATTTAATTGCAACATCCGAACAACCAATCGCTGCATTTCATCAAGACGAATGGTTACCCATTGATCAATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD063219             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GAAGTACAGTAGCCGGAGGTCGTGGATATTTTCTAAAGGGGCCGCTAGTCTTCCTGGAACAAGCAATCATAAACTTAGCTattcgga                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD080559             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGCGC AAGGAGGTTATGCGAGCAGTCGCTCAGTTAAGTCAGTTTGATGAAGAGTTGTACAAAGTTACAGGCCGTCGTGAAC TTAATGTCACAACCAATCATGATTCACAAACAAATGAAAGTGGAGAGGAAGAGAAATATTTAATTGCAACATCCGAACAACCAATCGCTGCATTTCATCAAGACGAATGGTTACCCATTGATCAATTACCGATTAAGTATGCAGGGATCTCGACTTGTTTCAGACAAGAAGTTGGTAGTCATGGTCGTGATACTCGTGGGATATTTCGTGTTCATCAGTTCGAAAAGGTTGAACAGTTTTGTATTACTAGTCCGCACGATAATCTGTCATGGGAGATGTTTGATCATATGATTTCTAATGCTGAAGCATTTCACCAGGCTCTGAAGTTGCCTTATCGTGTTGTTTCCATTGTATCGGGTGAGCTAAACAATGCTGCGTCTATGAAGTATGATTTAGAAGGTTGGTTCCCTGGGTCCGGAGCCTTTAGGGAACTTGTATCTTGTAGTAATTGTTTGGACTATCAATCTCGTCGGTTAGCAATTCGTTTCGGTCAAACAAAAAAAATTGAACAAAAGTGTTGAATATGTACATATGCTCAAATGC ACGATGTGTGCAACCACTCGAGTTATTTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD155235             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                tttcccactCGAGCAGTCGCTCAGTTAAGTCAGTTTGATGAAGAGTTGTACAAAGTTACAGGCCGTCGTGAAC TTAATGTCACAACCAATCATGATTCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD115528             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCAATCATGATTCACAAACAAATGAAAGTGGAGAGGAAGAGAAATATTTAATTGCAACATCCGAACAACCAATCGCTGCATTTCATCAAGACGAATGGTTACCCATTGATCAATTACCGATTAAGTATGCAGGGATCTCGACTTGTTTCAAACAAGAAGTTGGTAGTCATGGTCGTGATACTCGTGGGATATTTCGTGTTCATCAGTTCGAAAAGGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD132829             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAATATTTAATTGCAACATCCGAACAACCAATCGCTGCATTTCATCAAGACGAATGGTTACCCATTGATCAATTACCGATTAAGTATGCAGGGATCTCGACTTGTTTCAGACAAGAAGTTGGTAGTCATGGTCGTGATACTCGTGGGATATTTCGTGTTCATCAGTTCGAAAAGGTTGAACAGTTTTGTATTACTAGTCCGCACGATAATCTGTCATGGGAGATGTTTGATCATATGATTTCTAATGCTGAAGCATTTCACCAGGCTCTGAAGTTGCCTTATCGTGTTGTTTCCATTGTATCGGGTGAGCTAAACAATGCTGCGTCTATGAAGTATGATTTAGAAGGTTGGTTCCCTGGGTCCGGAGCCTTTAGGGAACTTGTATCTTGTAGTAATTGTTTGGACTATCAATCTCGTCGGTTAGCAATTCGTTTCGGTCAAACGAAAAAAA TGAACAAAAGTGTTGAATATGTACATATGCTC AATGCAACGATGTGTGCAACCACTCGAGTTATTTGTGCGATTCTAGAGAATTATCANACAGAACATGGGATTATTGTTCCTGATGTTTTAAAATCATTCATGCCCCAAAAATATCAGAAATTTATACCATTCAAAGGACATGAAGATAAAATACCTATCAGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD132849             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GATCATATGATTTCTAATGCTGAAGCATTTCACCAGGCTCTGAAGTTGCCTTATCGTGTTGTTTCCATTGTATCGGGTGAGCTAAACAATGCTGCATCTATGAAGTATGATTTAGAAGGTTGGTTCCCTGGGTCCGGAGCCTTTAGGGAACTTGTATCTTGTAGTAATTGTTTGGACTATCAATCTCGTCGGTTAGCAATTCGTTTCGGTCAAAC AAAAAAA TGAACAGAAGTGTTGAATATGTACATATGCTC AATGCAACGATGTGTGCAACCACTCGAGTTATTTGTGCGATTCTAGAGAATTATCAAACAGAACATGGGATTATTGTTCCTGATGTTTTAAAATCATTCATGCCCAAAAAATATCAGAAATTTATACCATTCAAAGGACATGAAGATAAAATACCTATCAGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD133403             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATCATATGATTTCTAATGCTGAAGCATTTCACCAGGCTCTGAAGTTGCCTTATCGTGTTGTTTCCATTGTATCGGGTGAGCTAAACAATGCTGCATCTATGAAGTATGATTTAGAAGGTTGGTTCCCTGGGTCCGGAGCCTTTAGGGAACTTGTATCTTGTAGTAATTGTTTGGACTATCAATCTCGTCGGTTAGCAATTCGTTTCGGTCAAACAAAAAAAA TGAACAGAAGTGTTGAATATGTACATATGCTC AATGCAACGATGTGTGCAACCACTCGAGTTATTTGTGCGATTCTAGAGAATTATCAAACAGAACATGGGATTATTGTTCCTGATGTTTTAAAATCATTCATG CCCAAAAATATCAGAAATTTATACCATTCAAAGGACATGAAGATAAAATACCTATCAGCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AI977105             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGAACAGAAGTGTTGAATATGTACATATGCTC AATGCAACGATGTGTGCAACCACTCGAGTTATTTGTGCGATTCTAGAGAATTATCAAACAGAACATGGGATTATTGTTCCTGATGTTTTAAAATCATTCATGCCCAAAAAATATCAGAAATTTATACCATTCAAAGGACATGAAGATAAAATACCTATCAGCATTGATAATGTGCCAGAGACAATTTACAGTCCATCCAATGCAAAATTTCACGATGAAACATCGTTCAATGAGCTGAATGAAAGAATAAATGCTTTAACTGGAGCCACAGAATCTGGTCTCGTCAATGCTATTTCTCAGATATCTGAAGTTCAAAAACGAATCGAAGATAAGTTAAATACACTAAGTTTATTCACCACAAGTAATCACATTGAAAAAGATGTCCGTAACAAAAATTNTGCTGTTGTTCATCCTGTAGAAGATAAAAACGACCTTGAAGTTGAAAATAAAGGTACAATTGATAATGAGTCAGTGAGTTTACA                                                                                                                                                                                                                                    ]
[-] EMBL AI976290             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATAAGTTAAATACACTAAGTTTATTCACCACAAGTAATCACATTGAAAAAGATGTCCGTAACAAAAATTTTGCTGTTGTTCATCCTGTAGAAGATAAAAACGACCTTGAAGTTGAAAATAAAGGTACAATTGATAATGAGTCAGTGAGTTTACAATCAACTACTCCAGAACCAACTGATTTTAAGAAGAAGCGGAAGAGAAAACCAAAAAAGAAACAATCGGATTAGAATTTTATTTTACTGTGGTGCTCAGCTAATATTGCATATTAATGTTTTATTGTTTTGACTCACGCTTGCATATAAATATAAATCTTGTCTGTGGTGTTAAAAAAAAAAAAAAAAAAAAAAAAAACATCCATGCAGCTGCATTACCGTACTGCGTA]




>consensus_10588#0
CGTTCCAATGAAATCAAAAGATTCAGAGGTACTAAACGTGTCGATTTGCTATTAGAAGCA
GATGAGAATTGGCGGAAAGCGCGTTTCAGAGCTGATCATTTAAATAAAGTAAAGAACTTC
TGCAGCAAAACTATTGCTAAGAAGATTAAAGAAAACAAAGACGGCCCGGATTTTGATTCT
AATTTGTTTGATGATGTATTTGATCGCCTTGATTCACTTGTAGAAGCTGATTTGCAGTCC
TTGGGTGTAGCACAGTTAAAGTCTTTGTCCTGTCTTATTGATGAAGAAACAAAGAGAAAT
GCAGCCTTCGTAGTGGAGTTCGAGTCTGTAAGACAGCAGCAATTGTATGAGATTGGTAAT
CTCCTACACCCAGATGTACCGATAAGTAACAATGAGGAAGACAATTTGGTTATTCGAACT
TTCGGAAAGAGCGATTTTCGAAAACCTTTATCTCATGTTGATTTAGTGATAATGGTAGAT
GGTTTTGACGGTGAACGTGGAAGTACAGTAGCCGGAGGTCGTGGATATTTTCTAAAGGGG
CCGCTAGTCTTCCTGGAACAAGCAATCATAAACTTAGCTCTACAAATGCTAGATGAACGG
GGTTTTACGCCACTGTACACTCCATTTTTTATGCGCAAGGAGGCTATGCGAGCAGTCGCT
CAGTTAAGTCAGTTTGATGAAGAGTTGTACAAAGTTACAGGCCGTCGTGAACTTAATGTC
ACAACCAATCATGATTCACAAACAAATGAAAGTGGAGAGGAAGAGAAATATTTAATTGCA
ACATCCGAACAACCAATCGCTGCATTTCATCAAGACGAATGGTTACCCATTGATCAATTA
CCGATTAAGTATGCAGGGATCTCGACTTGTTTCAGACAAGAAGTTGGTAGTCATGGTCGT
GATACTCGTGGGATATTTCGTGTTCATCAGTTCGAAAAGGTTGAACAGTTTTGTATTACT
AGTCCGCACGATAATCTGTCATGGGAGATGTTTGATCATATGATTTCTAATGCTGAAGCA
TTTCACCAGGCTCTGAAGTTGCCTTATCGTGTTGTTTCCATTGTATCGGGTGAGCTAAAC
AATGCTGCGTCTATGAAGTATGATTTAGAAGGTTGGTTCCCTGGGTCCGGAGCCTTTAGG
GAACTTGTATCTTGTAGTAATTGTTTGGACTATCAATCTCGTCGGTTAGCAATTCGTTTC
GGTCAAACAAAAAAAATGAACAGAAGTGTTGAATATGTACATATGCTCAATGCAACGATG
TGTGCAACCACTCGAGTTATTTGTGCGATTCTAGAGAATTATCAAACAGAACATGGGATT
ATTGTTCCTGATGTTTTAAAATCATTCATGCCCCAAAAATATCAGAAATTTATACCATTC
AAAGGACATGAAGATAAAATACCTATCAGCATTGATAATGTGCCAGAGACAATTTACAGT
CCATCCAATGCAAAATTTCACGATGAAACATCGTTCAATGAGCTGAATGAAAGAATAAAT
GCTTTAACTGGAGCCACAGAATCTGGTCTCGTCAATGCTATTTCTCAGATATCTGAAGTT
CAAAAACGAATCGAAGATAAGTTAAATACACTAAGTTTATTCACCACAAGTAATCACATT
GAAAAAGATGTCCGTAACAAAAATTNTGCTGTTGTTCATCCTGTAGAAGATAAAAACGAC
CTTGAAGTTGAAAATAAAGGTACAATTGATAATGAGTCAGTGAGTTTACAATCAACTACT
CCAGAACCAACTGATTTTAAGAAGAAGCGGAAGAGAAAACCAAAAAAGAAACAATCGGAT
TAGAATTTTATTTTACTGTGGTGCTCAGCTAATATTGCATATTAATGTTTTATTGTTTTG
ACTCACGCTTGCATATAAATATAAATCTTGTCTGTGGTGTTAAAAAAAAAAAAAAAAAAA
AAAAAAACATCCATGCAGCTGCATTACCGTACTGCGTA

consensusID : consensus_10588#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 358
fasta sequence

                              [TGAACGGGGTTTTACGCCACTGTACACTCCATTTTTTATGCGCAAGGAGGTTATGCGAGCAGTCGCTCAGTTAAGTCAGTTTGATGATGTATTTGATCGCCTTGATTCACTTGTAGAAGCTGATTTGCAGTCCTTGGGTGTAGCACAGTTAAAGTCTTTGTCCTGTCTTATTGATGAAGAAACAAAGAGAAATGCAGCCTTCGTAGTGGAGTTCGAGTCTGTAAGACAGCAGCAATTGTATGAGATTGGTAATCTCCTACACCCAGATGTACCGATAAGTAACAATGAGGAAGACAATTTGGTTATTCGAACTTTCGGAAAGAGCGATTTTCGAAAACCTTTATCTCATGTTGATTTA]

[-] EMBL CD119887             [TGAACGGGGTTTTACGCCACTGTACACTCCATTTTTTATGCGCAAGGAGGTTATGCGAGCAGTCGCTCAGTTAAGTCAGTTTGATGATGTATTTGATCGCCTTGATTCACTTGTAGAAGCTGATTTGCAGTCCTTGGGTGTAGCACAGTTAAAGTCTTTGTCCTGTCTTATTGATGAAGAAACAAAGAGAAATGCAGCCTTCGTAGTGGAGTTCGAGTCTGTAAGACAGCAGCAATTGTATGAGATTGGTAATCTCCTACACCCAGATGTACCGATAAGTAACAATGAGGAAGACAATTTGGTTATTCGAACTTTCGGAAAGAGCGATTTTCGAAAACCTTTATCTCATGTTGATTTA]




>consensus_10588#1
TGAACGGGGTTTTACGCCACTGTACACTCCATTTTTTATGCGCAAGGAGGTTATGCGAGC
AGTCGCTCAGTTAAGTCAGTTTGATGATGTATTTGATCGCCTTGATTCACTTGTAGAAGC
TGATTTGCAGTCCTTGGGTGTAGCACAGTTAAAGTCTTTGTCCTGTCTTATTGATGAAGA
AACAAAGAGAAATGCAGCCTTCGTAGTGGAGTTCGAGTCTGTAAGACAGCAGCAATTGTA
TGAGATTGGTAATCTCCTACACCCAGATGTACCGATAAGTAACAATGAGGAAGACAATTT
GGTTATTCGAACTTTCGGAAAGAGCGATTTTCGAAAACCTTTATCTCATGTTGATTTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10588#0      CGTTCCAATGAAATCAAAAGATTCAGAGGTACTAAACGTGTCGATTTGCTATTAGAAGCA 60
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      GATGAGAATTGGCGGAAAGCGCGTTTCAGAGCTGATCATTTAAATAAAGTAAAGAACTTC 120
consensus_10588#1      ----------------------------------------TGAACGGGGTTTTACGCCAC 20
                                                               * **    **      *  *

consensus_10588#0      TGCAGCAAAACTATTGCTAAGAAGATTAAAGAAAACAAAGACGGCCCGGATTTTGATTCT 180
consensus_10588#1      TGTAC--ACTCCATTTTTTATGCGCAAGGAGGTTATGCGAGCAGTCG-----CTCAGTTA 73
                       ** *   *  * ***  * *   *     **   *      * * *       * * *  

consensus_10588#0      AATTTGTTTGATGATGTATTTGATCGCCTTGATTCACTTGTAGAAGCTGATTTGCAGTCC 240
consensus_10588#1      AGTCAGTTTGATGATGTATTTGATCGCCTTGATTCACTTGTAGAAGCTGATTTGCAGTCC 133
                       * *  *******************************************************

consensus_10588#0      TTGGGTGTAGCACAGTTAAAGTCTTTGTCCTGTCTTATTGATGAAGAAACAAAGAGAAAT 300
consensus_10588#1      TTGGGTGTAGCACAGTTAAAGTCTTTGTCCTGTCTTATTGATGAAGAAACAAAGAGAAAT 193
                       ************************************************************

consensus_10588#0      GCAGCCTTCGTAGTGGAGTTCGAGTCTGTAAGACAGCAGCAATTGTATGAGATTGGTAAT 360
consensus_10588#1      GCAGCCTTCGTAGTGGAGTTCGAGTCTGTAAGACAGCAGCAATTGTATGAGATTGGTAAT 253
                       ************************************************************

consensus_10588#0      CTCCTACACCCAGATGTACCGATAAGTAACAATGAGGAAGACAATTTGGTTATTCGAACT 420
consensus_10588#1      CTCCTACACCCAGATGTACCGATAAGTAACAATGAGGAAGACAATTTGGTTATTCGAACT 313
                       ************************************************************

consensus_10588#0      TTCGGAAAGAGCGATTTTCGAAAACCTTTATCTCATGTTGATTTAGTGATAATGGTAGAT 480
consensus_10588#1      TTCGGAAAGAGCGATTTTCGAAAACCTTTATCTCATGTTGATTTA--------------- 358
                       *********************************************               

consensus_10588#0      GGTTTTGACGGTGAACGTGGAAGTACAGTAGCCGGAGGTCGTGGATATTTTCTAAAGGGG 540
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      CCGCTAGTCTTCCTGGAACAAGCAATCATAAACTTAGCTCTACAAATGCTAGATGAACGG 600
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      GGTTTTACGCCACTGTACACTCCATTTTTTATGCGCAAGGAGGCTATGCGAGCAGTCGCT 660
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      CAGTTAAGTCAGTTTGATGAAGAGTTGTACAAAGTTACAGGCCGTCGTGAACTTAATGTC 720
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      ACAACCAATCATGATTCACAAACAAATGAAAGTGGAGAGGAAGAGAAATATTTAATTGCA 780
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      ACATCCGAACAACCAATCGCTGCATTTCATCAAGACGAATGGTTACCCATTGATCAATTA 840
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      CCGATTAAGTATGCAGGGATCTCGACTTGTTTCAGACAAGAAGTTGGTAGTCATGGTCGT 900
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      GATACTCGTGGGATATTTCGTGTTCATCAGTTCGAAAAGGTTGAACAGTTTTGTATTACT 960
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      AGTCCGCACGATAATCTGTCATGGGAGATGTTTGATCATATGATTTCTAATGCTGAAGCA 1020
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      TTTCACCAGGCTCTGAAGTTGCCTTATCGTGTTGTTTCCATTGTATCGGGTGAGCTAAAC 1080
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      AATGCTGCGTCTATGAAGTATGATTTAGAAGGTTGGTTCCCTGGGTCCGGAGCCTTTAGG 1140
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      GAACTTGTATCTTGTAGTAATTGTTTGGACTATCAATCTCGTCGGTTAGCAATTCGTTTC 1200
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      GGTCAAACAAAAAAAATGAACAGAAGTGTTGAATATGTACATATGCTCAATGCAACGATG 1260
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      TGTGCAACCACTCGAGTTATTTGTGCGATTCTAGAGAATTATCAAACAGAACATGGGATT 1320
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      ATTGTTCCTGATGTTTTAAAATCATTCATGCCCCAAAAATATCAGAAATTTATACCATTC 1380
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      AAAGGACATGAAGATAAAATACCTATCAGCATTGATAATGTGCCAGAGACAATTTACAGT 1440
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      CCATCCAATGCAAAATTTCACGATGAAACATCGTTCAATGAGCTGAATGAAAGAATAAAT 1500
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      GCTTTAACTGGAGCCACAGAATCTGGTCTCGTCAATGCTATTTCTCAGATATCTGAAGTT 1560
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      CAAAAACGAATCGAAGATAAGTTAAATACACTAAGTTTATTCACCACAAGTAATCACATT 1620
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      GAAAAAGATGTCCGTAACAAAAATTNTGCTGTTGTTCATCCTGTAGAAGATAAAAACGAC 1680
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      CTTGAAGTTGAAAATAAAGGTACAATTGATAATGAGTCAGTGAGTTTACAATCAACTACT 1740
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      CCAGAACCAACTGATTTTAAGAAGAAGCGGAAGAGAAAACCAAAAAAGAAACAATCGGAT 1800
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      TAGAATTTTATTTTACTGTGGTGCTCAGCTAATATTGCATATTAATGTTTTATTGTTTTG 1860
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      ACTCACGCTTGCATATAAATATAAATCTTGTCTGTGGTGTTAAAAAAAAAAAAAAAAAAA 1920
consensus_10588#1      ------------------------------------------------------------
                                                                                   

consensus_10588#0      AAAAAAACATCCATGCAGCTGCATTACCGTACTGCGTA 1958
consensus_10588#1      --------------------------------------