cluster # 10589

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Schistosoma mansoni
cluster # 10589 cluster # 10589 Sequences # 18 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10589#0 length = 818 sequences # 11
consensus_10589#1 length = 572 sequences # 3

consensus_10589#2 length = 541 sequences # 2
consensus_10589#3 length = 347 sequences # 1
consensus_10589#4 length = 326 sequences # 1

consensusID : consensus_10589#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 818
fasta sequence

                              [CACGCCAANAATTTGGCACGAGGCTCATTAAGATAACAAGAATTTTGATTTTAATTAAATTTCAAGGATGGCAAGAATTGGCAAAGGAATTCAATCATGCCTATCCTGGATTCATCAAACTGATGGTAGAGTGCCATCAAATGCAATTGATGCAGGTCATGATGTTTACATTGCTCGTATATATCATTCTGGCGATGTAATTCCTGGTAAAGTTGTACCACATTTGGGCAAAGCTTATATTAGTTATGATGGAACAGAATATGAATTTGATTCATATGAGGTATTATGTGATACAAAATTA-CCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTTCCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGAGAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCATGGATGCGCCTATTTCCCTTACGGTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGTATTAATTAAATAACTAC-AAAAAAATTTTTAAAAAAGTACGAATTCCAAAACCATAATAATCGTAAATTAAATTTTCTTTTTTTTTTTTTTTTGAAAAAAAATCAATCATTTATTATTTCATTCATTCTTATTCACCGTTTTTGTTGTCAACCAATTAATGACCATTGAAAAACACCTACCCAGTTTTTTTTTGTAAAACCAAATGATAATCATTTTTCTGAATAAAATTTGTTTATTATATAAAAAAAAAAAAAAAAAAAAAAAAAATCAGCCATGCAGCTGCATTACCGACT]

[+] EMBL CD079612             [CACGCCAANAATTTGGCACGAGGCTCATTAAGATAACAAGAATTTTGATTTTAATTAAATTTCAAGGATGGCAAGAATTGGCAAAGGAATTCAATCATGCCTATCCTGGATTCATCAAACTGATGGTAGAGTGCCATCAAATGCAATTGATGCAGGTCATGATGTTTACATTGCTCGTATATATCATTCTGGCGATGTAATTCCTGGTAAAGTTGTACCACATTTGGGCAAAGCTTATATTAGTTATGATGGAACAGAATATGAATTTGATTCATATGAGGTATTATGTGATACAAAATTA CCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTTCCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGAGAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCATGGATGCGCCTATTTCCCTTACGGTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGTATTAATTAAATAACTAC AAAAAAATTTTTAAAAAAGTACGAATTCCAAAACCATAATAATC                                                                                                                                                                                                                                        ]
[+] EMBL CD080032             [                                     AAGAATTTTGATTTTAATTAAATTTCAAGGATGGCAAGAATTGGCAAAGGAATTCAATCATGCCTATCCTGGATTCATCAAACTGATGGTAGAGTGCCATCAAATGCAATTGATGCAGGTCATGATGTTTACATTGCTCGTATATATCATTCTGGCGATGTAATTCCTGGTAAAGTTGTACCACATTTGGGCAAAGCTTATATTAGTTATGATGGAACAGAATATGAATTTGATTCATATGAGGTATTATGTGATACAAAATTACCCATATGGGCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTTCCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGAGAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCATGGATGCGCCTATTT CCTTACG                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD075192             [                                                             TCAAGGATGGCAAGAATTGGCAAAGGAATTCAATCATGCCTATCCTGGATTCATCAAACTGATGGTAGAGTGCCATCAAATGCAATTGATGCAGGTCATGATGTTTACATTGCTCGTATATATCATTCTGGCGATGTAATTCCTGGTAAAGTTGTACCACATTTGGGCAAAGCTTATATTAGTTATGATGGAACAGAATATGAATTTGATTCATATGAGGTATTATGTGATACAAAATTA CCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTTCCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGAGAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCATGGATGCGCCTATTTCCCTTACGGTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGTATTAATTAAATAACTAC AAAAAAATTTTTAAAAAAGTACGAATTCCAAAACCATAATAATCG                                                                                                                                                                                                                                       ]
[+] EMBL AW017128             [                                                                gaGATGGCAAGAATTGGCAAAGGAATTCAATCATGCCTATCCTGGATTCATCAAACTGATGGTAGAGTGCCATCAAATGCAATTGATGCAGGTCATGATGTTTACATTGCTCGTATATATCATTCTGGCGATGTAATTCCTGGTAAAGTTGTACCACATTTGGGCAAAGCTTATATTAGTTATGATGGAACAGAATATGAATTTGATTCATATGAGGTATTATGTGATACAAAATTA CCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTTCCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGAGAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCATGGATGCGCCTATTTCCCTTACGGTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGTATTAATTAAATAACTACAAAAAAAATTTTTAAAAAAGTACGAATTCCAAAACCATAATAATCGTAAATTAAATTTTCTTTTTTTTTTTTTTTTGAAAAAAAATCAATCATTTATTATTTCATTCATT                                                                                                                                                                       ]
[-] EMBL CD073876             [                                                                                                                                           AATGCAATTGATGCAGGTCATGATGTTTACATTGCTCGTATATATCATTCTGGCGATGTAATTCCTGGTAAAGTTGTACCACATTTGGGCAAAGCTTATATTAGTTATGATGGAACAGAATATGAATTTGATTCATATGAGGTATTATGTGATACAAAATTA CCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTTCCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGAGAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCATGGATGCGCCTATTTCCCTTACGGTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGTATTAATTAAATAACTAC AAAAAAATTTTTAAAAAAGTACGAATTCCAAAACCATAATAATCG                                                                                                                                                                                                                                       ]
[-] EMBL CD076689             [                                                                                                                                                                                          TTCTGGCGATGTAATTCCTGGTAAAGTTGTACCACATTTGGGCAAAGCTTATATTAGTTATGATGGAACAGAATATGAATTTGATTCATATGAGGTATTATGTGATACAAAATTA CCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTTCCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGAGAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCATGGATGCGCCTATTTCCCTTACGGTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGTATTAATTAAATAACTAC AAAAAAATTTTTAAAAAAGTACGAATTCCAAAACCATAATAATCG                                                                                                                                                                                                                                       ]
[-] EMBL AI977519             [                                                                                                                                                                                                                                                                                                                                                                                                                                          ATGGTGAAGGTGTAGTTGGTAAAGTTCATCAAAGTCATGAATGCGCCTATTTCCCGTACGGTGGTCAAGAAAGAAAAATGAACCACTATAATGTTCTTGTATTAATTAAATAACTAC AAAAAAATTTTTAAAAAAGTATGAATTCCAAAACCATAATAATCGTAAATTAAA     TTTTGTTTTTTTTTTTG AAAAAAATCAATCATATATTATTTCATTCATTCTTATTCACCGTTTTTGTTGTCAACCAATTAATGCCCATTGAAAAACACCTACCCAGTTTTTTTTTGTAAAACCAAATGATAATCATTTTTCTGAATAAAATTTGTTTATTATATAAAAAAAAAAAAAAAAAAAAAAAAAATCAGCCATGCAGCTGCATTACCGACT]
[+] EMBL CD083115             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAATCATTTATTATTTCATTCATTCTTATTCACCGTTTTTGTTGTCAACCAATTAATGACCATTGAAAAACACCTACCCAGTTTTTTTTTGTAAAACCAAATGANTATCATTNTTCTGAATAAAtt                                                                 ]
[-] EMBL CD075191             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AATCATTTATTATTTCATTCATTCTTATTCACCGTTTTTGTTGTCAACCAATTAATGACCATTGAAAAACACCTACCCAGTTTTTTTTTGTAAAACCAAATGATAATCATTTTTCTGAATAAAATTTG TTATTATAa                                                    ]
[-] EMBL CD076688             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AATCATTTATTATTTCATTCATTCTTATTCACCGTTTTTGTTGTCAACCAATTAATGACCATTGAAAAACACCTACCCAGTTTTTTTTTGTAAAACCAAATGATAATCATTTTTCTGAATAAAATTT                                                               ]
[-] EMBL CD073875             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AATCATTTATTATTTCATTCATTCTTATTCACCGTTTTTGTTGTCAACCAATTAATGACCATTGAAAAACACCTACCCAG TTTTTTTTGTAAAACCAAATGAGAATCATTTTTCTGAAAAAAATTT                                                               ]




>consensus_10589#0
CACGCCAANAATTTGGCACGAGGCTCATTAAGATAACAAGAATTTTGATTTTAATTAAAT
TTCAAGGATGGCAAGAATTGGCAAAGGAATTCAATCATGCCTATCCTGGATTCATCAAAC
TGATGGTAGAGTGCCATCAAATGCAATTGATGCAGGTCATGATGTTTACATTGCTCGTAT
ATATCATTCTGGCGATGTAATTCCTGGTAAAGTTGTACCACATTTGGGCAAAGCTTATAT
TAGTTATGATGGAACAGAATATGAATTTGATTCATATGAGGTATTATGTGATACAAAATT
ACCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTTCCTAA
ATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGAGAACA
TATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCATGGATGCGCCTATTTCCC
TTACGGTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGTATTAATTAAATAACT
ACAAAAAAATTTTTAAAAAAGTACGAATTCCAAAACCATAATAATCGTAAATTAAATTTT
CTTTTTTTTTTTTTTTTGAAAAAAAATCAATCATTTATTATTTCATTCATTCTTATTCAC
CGTTTTTGTTGTCAACCAATTAATGACCATTGAAAAACACCTACCCAGTTTTTTTTTGTA
AAACCAAATGATAATCATTTTTCTGAATAAAATTTGTTTATTATATAAAAAAAAAAAAAA
AAAAAAAAAAAATCAGCCATGCAGCTGCATTACCGACT

consensusID : consensus_10589#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 572
fasta sequence

                              [TCCGAGCCAAGATAGGGCACGAGGACAATTTTGATTTTAATTAAATTTCAAGGATGGCAAGAATTGGCAAAGGAATTCAATCATGCCTATCCTGGATTCATCAAACTGATGGTAGAGTGCCATCAAATGCAATTGATGCAGGTCATGATGTTTACATTGCTCGTATATATCATTCTGGCGATGTAATTCCTGGTAAAGTTGTACCACATTTGGGCAAAGCTTATATTAGTTATGATGGAACAGAATATGAATTTGATTCATATGAGGTATTATGTGATACAAAA-TTACCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTTCCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGAGAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCATGGATGCGCCTATTTCCCTTACGGTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGTATTAATTAAATAACTACAAAAAAATTTTTAAAAAAGTACGAATTCCAAAACCATAATAATC]

[+] EMBL CD081358             [TCCGAGCCAAGATAGGGCACGAGGACAATTTTGATTTTAATTAAATTTCAAGGATGGCAAGAATTGGCAAAGGAATTCAATCATGCCTATCCTGGATTCATCAAACTGATGGTAGAGTGCCATCAAATGCAATTGATGCAGGTCATGATGTTTACATTGCTCGTATATATCATTCTGGCGATGTAATTCCTGGTAAAGTTGTACCACATTTGGGCAAAGCTTATATTAGTTATGATGGAACAGAATATGAATTTGATTCATATGAGGTATTATGTGATACAAAA TTACCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTTCCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGAGAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCATGGATGCGCCTATTTCCCTTACGGTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGTATTAATTAAATAACTACAAAAAAATTTTTAAAAAAGTACGAATTCCAAAACCATAATAATC]
[+] EMBL CD077948             [                              TTGATTTTAATTAAATTTCAAGGATGGCAAGAATTGGCAAAGGAATTCAATCATGCCTATCCTGGATTCATCAAACTGATGGTAGAGTGCCATCAAATGCAATTGATGCAGGTCATGATGTTTACATTGCTCGTATATATCATTCTGGCGATGTAATTCCTGGTAAAGTTGTACCACATTTGGGCAAAGCTTATATTAGTTATGATGGAACAGAATATGAATTTGATTCATATGAGGTATTATGTGATACAAAATTTACCATAT GTCCCCAACATTGTTACAAATGGG ACGAC                                                                                                                                                                                                                                                        ]
[+] EMBL CD083761             [                                                  gaGATGGCAAGAATTGGCAAAGGAATTCAATCATGCCTATCCTGGATTCATCAAACTGATGGTAGAGTGCCATCAAATGCAATTGATGCAGGTCATGATGTTTACATTGCTCGTATAT TCATTCTGGCGATGTAATTCCTGGTAAAGTTGTACCACATTTGGGCAAAGCTTATATTAGTTATGATGGAACAGAATATGAATTTGATTCATATGAGGTATTATGTGATACAAAA TTACCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTTCCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGAGAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGACAGTCATGGATGCGCCTATTTCCCTTA                                                                                                       ]




>consensus_10589#1
TCCGAGCCAAGATAGGGCACGAGGACAATTTTGATTTTAATTAAATTTCAAGGATGGCAA
GAATTGGCAAAGGAATTCAATCATGCCTATCCTGGATTCATCAAACTGATGGTAGAGTGC
CATCAAATGCAATTGATGCAGGTCATGATGTTTACATTGCTCGTATATATCATTCTGGCG
ATGTAATTCCTGGTAAAGTTGTACCACATTTGGGCAAAGCTTATATTAGTTATGATGGAA
CAGAATATGAATTTGATTCATATGAGGTATTATGTGATACAAAATTACCATATGGTCCCC
AACATTGTTACAAATGGGAACGACATAGTAATGGATATGTTCCTAAATATGCTGTTGTTG
GAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGAGAACATATTAATGGTGAAC
GTGTAGTTGGTAAAGTTCATGAAAGTCATGGATGCGCCTATTTCCCTTACGGTGGTCAAG
AAAGAAAAATGAATCACTATGATGTTCTTGTATTAATTAAATAACTACAAAAAAATTTTT
AAAAAAGTACGAATTCCAAAACCATAATAATC

consensusID : consensus_10589#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 541
fasta sequence

                              [CGNAGGCCAGAATTCGGCACGAGGGGCAAGAATTGGCAAAGGAATTCAATCATGCCTATCCTGGATTCATCAAACTGATGGTAGAGTGCCATCAAATGCAATTGATGCAGGTCATGATGTTTACATTGCTCGTATATATCATTCTGGCGATGTAATTCCTGGTAAAGTTGTACCACATTTGGGCAAAGCTTATATTAGTTATGATGGAACAGAATATGAATTTGATTCATATGAGGTATTATGTGATACAAAATTACCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTTCCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGAGAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCATGGATGCGCCTATTTCCCTTACGGTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGTATTAATTAAATAACTACAAAAAAATTTTTAAAAAAGTACGAATTCCAAAACCATAATAATC]

[+] EMBL CD083114             [CGNAGGCCAGAATTCGGCACGAGGGGCAAGAATTGGCAAAGGAATTCAATCATGCCTATCCTGGATTCATCAAACTGATGGTAGAGTGCCATCAAATGCAATTGATGCAGGTCATGATGTTTACATTGCTCGTATATATCATTCTGGCGATGTAATTCCTGGTAAAGTTGTACCACATTTGGGCAAAGCTTATATTAGTTATGATGGAACAGAATATGAATTTGATTCATATGAGGTATTATGTGATACAAAATTACCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTTCCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGAGAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCATGGATGCGCCTATTTCCCTTACGGTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGTATTAATTAAATAACTACAAAAAAATTTTTAAAAAAGTACGAATTCCAAAACCATAATAATC]
[+] EMBL CD079248             [                                                                                                             GGT ATGATG TTACATTGCTCGTATATATCATTCTGGCGATGTAATTCCTGGTAAAGTTGTACCACATTTGGGCAAAGCTTATATTAGTTATGATGGAACAGAATATGAATTTGATTCATATGAGGTATTATGTGATACAAAATTACCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTTCCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGAGAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCATGGATGCGCCTATTTCCCTTACGGTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGTATTAATTAAATAACTAC AAAAAATTTTTAAAAAAGTACGAATTCCAAAACCATAATAATC]




>consensus_10589#2
CGNAGGCCAGAATTCGGCACGAGGGGCAAGAATTGGCAAAGGAATTCAATCATGCCTATC
CTGGATTCATCAAACTGATGGTAGAGTGCCATCAAATGCAATTGATGCAGGTCATGATGT
TTACATTGCTCGTATATATCATTCTGGCGATGTAATTCCTGGTAAAGTTGTACCACATTT
GGGCAAAGCTTATATTAGTTATGATGGAACAGAATATGAATTTGATTCATATGAGGTATT
ATGTGATACAAAATTACCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAA
TGGATATGTTCCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTA
CATAGCTCGAGAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCATGG
ATGCGCCTATTTCCCTTACGGTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGT
ATTAATTAAATAACTACAAAAAAATTTTTAAAAAAGTACGAATTCCAAAACCATAATAAT
C

consensusID : consensus_10589#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 347
fasta sequence

                              [CGGCACGAGGGATGTATTCCTGGTAAAGTTGTACACATTTGGGCAAAGCTTATATTAGTTATGATGGAACAGAATATGAATTTGATTCATATGAGGTATTATGTGATACAAAATTACCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTTCCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGAGAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCATGGATGCGCCTATTTCCCTTACGGTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGTATTAATT]

[+] EMBL CD083561             [CGGCACGAGGGATGTATTCCTGGTAAAGTTGTACACATTTGGGCAAAGCTTATATTAGTTATGATGGAACAGAATATGAATTTGATTCATATGAGGTATTATGTGATACAAAATTACCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTTCCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGAGAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCATGGATGCGCCTATTTCCCTTACGGTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGTATTAATT]




>consensus_10589#3
CGGCACGAGGGATGTATTCCTGGTAAAGTTGTACACATTTGGGCAAAGCTTATATTAGTT
ATGATGGAACAGAATATGAATTTGATTCATATGAGGTATTATGTGATACAAAATTACCAT
ATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTTCCTAAATATG
CTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGAGAACATATTA
ATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCATGGATGCGCCTATTTCCCTTACG
GTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGTATTAATT

consensusID : consensus_10589#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 326
fasta sequence

                              [CAGAGATCGGGCTAATCACCCACTCTACCTATACCCACAAATGATTACGAAGGTTACAAAGAATCAGATCATTCTTAGTATGAATTTAATTAAAATTTAGTTCTGAATATAAACAATTGGATAATATAAATGTCTACTAATGATTATTTATTATTTTATATTTATAACAGAATGATACATTTACTGTATTATTTTAGAATCATGTATAATATCTTTAGAATGAAAAACTTACTTTACCAACTACACGTTCACCATTAATATGTTCTCGAGCTATGTAAAGTGGTTCATTGGATGAAGTTATACCTCCAACAACAGCATATTTAGGA]

[+] EMBL CD088236             [CAGAGATCGGGCTAATCACCCACTCTACCTATACCCACAAATGATTACGAAGGTTACAAAGAATCAGATCATTCTTAGTATGAATTTAATTAAAATTTAGTTCTGAATATAAACAATTGGATAATATAAATGTCTACTAATGATTATTTATTATTTTATATTTATAACAGAATGATACATTTACTGTATTATTTTAGAATCATGTATAATATCTTTAGAATGAAAAACTTACTTTACCAACTACACGTTCACCATTAATATGTTCTCGAGCTATGTAAAGTGGTTCATTGGATGAAGTTATACCTCCAACAACAGCATATTTAGGA]




>consensus_10589#4
CAGAGATCGGGCTAATCACCCACTCTACCTATACCCACAAATGATTACGAAGGTTACAAA
GAATCAGATCATTCTTAGTATGAATTTAATTAAAATTTAGTTCTGAATATAAACAATTGG
ATAATATAAATGTCTACTAATGATTATTTATTATTTTATATTTATAACAGAATGATACAT
TTACTGTATTATTTTAGAATCATGTATAATATCTTTAGAATGAAAAACTTACTTTACCAA
CTACACGTTCACCATTAATATGTTCTCGAGCTATGTAAAGTGGTTCATTGGATGAAGTTA
TACCTCCAACAACAGCATATTTAGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10589#2      ---------------------------------------------CGNAGGCCAGAATTC 15
consensus_10589#3      ------------------------------------------------------------
consensus_10589#1      --------------TCCGAGCCAAGATAGGGCACGAGGACAATTTTGATTTTAATTAAAT 46
consensus_10589#0      CACGCCAANAATTTGGCACGAGGCTCATTAAGATAACAAGAATTTTGATTTTAATTAAAT 60
consensus_10589#4      ------------------------------------------------------------
                                                                                   

consensus_10589#2      GGCACGAGGGGCAAGAATTGGCAAAGGAATTCAATCATGCCTATCCTGGATTCATCAAAC 75
consensus_10589#3      ------------------------------------------------------------
consensus_10589#1      TTCAAGGATGGCAAGAATTGGCAAAGGAATTCAATCATGCCTATCCTGGATTCATCAAAC 106
consensus_10589#0      TTCAAGGATGGCAAGAATTGGCAAAGGAATTCAATCATGCCTATCCTGGATTCATCAAAC 120
consensus_10589#4      ------------------------------------------------------------
                                                                                   

consensus_10589#2      TGATGGTAGAGTGCCATCAAATGCAATTGATGCAGGTCATGATGTTTACATTGCTCGTAT 135
consensus_10589#3      ------------------------------------------------------------
consensus_10589#1      TGATGGTAGAGTGCCATCAAATGCAATTGATGCAGGTCATGATGTTTACATTGCTCGTAT 166
consensus_10589#0      TGATGGTAGAGTGCCATCAAATGCAATTGATGCAGGTCATGATGTTTACATTGCTCGTAT 180
consensus_10589#4      ------------------------------------------------CAGAGATCGGGC 12
                                                                                   

consensus_10589#2      ATATCATTCTGGCGATGTAATTCCTGGTAAAGTTGTACCACATTTGGGCAAAGCTTATAT 195
consensus_10589#3      ---CGGCACGAGGGATGTA-TTCCTGGTAAAGTTGTAC-ACATTTGGGCAAAGCTTATAT 55
consensus_10589#1      ATATCATTCTGGCGATGTAATTCCTGGTAAAGTTGTACCACATTTGGGCAAAGCTTATAT 226
consensus_10589#0      ATATCATTCTGGCGATGTAATTCCTGGTAAAGTTGTACCACATTTGGGCAAAGCTTATAT 240
consensus_10589#4      TAATCACCCACTCTACCTA--TACCCACAAATGATTACGAAGGTTACA-AAGAATCAGAT 69
                               *     *  **  * *    ***    *** *   **    **   * * **

consensus_10589#2      TAGTTATGATG-GAACAGAATATGAATTTGATTC---ATATGAGGTATTATGTGATACAA 251
consensus_10589#3      TAGTTATGATG-GAACAGAATATGAATTTGATTC---ATATGAGGTATTATGTGATACAA 111
consensus_10589#1      TAGTTATGATG-GAACAGAATATGAATTTGATTC---ATATGAGGTATTATGTGATACAA 282
consensus_10589#0      TAGTTATGATG-GAACAGAATATGAATTTGATTC---ATATGAGGTATTATGTGATACAA 296
consensus_10589#4      CATTCTTAGTATGAATTTAATTAAAATTTAGTTCTGAATATAAACAATTGGATAATATAA 129
                        * *  *  *  ***   ***   *****  ***   **** *   ***   * *** **

consensus_10589#2      A-ATTACCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTT 310
consensus_10589#3      A-ATTACCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTT 170
consensus_10589#1      A-ATTACCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTT 341
consensus_10589#0      A-ATTACCATATGGTCCCCAACATTGTTACAAATGGGAACGACATAGTAATGGATATGTT 355
consensus_10589#4      ATGTCTACTAATGATTATTTATTATTTTATATTT----ATAACAGAATGATACATTTACT 185
                       *  *   *  *** *     *   * *** *  *    *  *** * * **  ** *  *

consensus_10589#2      CCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGA 370
consensus_10589#3      CCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGA 230
consensus_10589#1      CCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGA 401
consensus_10589#0      CCTAAATATGCTGTTGTTGGAGGTATAACTTCATCCAATGAACCACTTTACATAGCTCGA 415
consensus_10589#4      GT--ATTATTTTAGAATC--ATGTATAATATCTTTAGAATGAAAAACTTACTTTAC-CAA 240
                           * ***  *    *   * ******  ** *   *   *  *  **** *  * * *

consensus_10589#2      GAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCAT-GGATGCGCCTA 429
consensus_10589#3      GAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCAT-GGATGCGCCTA 289
consensus_10589#1      GAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCAT-GGATGCGCCTA 460
consensus_10589#0      GAACATATTAATGGTGAACGTGTAGTTGGTAAAGTTCATGAAAGTCAT-GGATGCGCCTA 474
consensus_10589#4      CTACACGTTCACCATTAATATGTTCTCGAGCTATGTAAAGTGGTTCATTGGATGAAGTTA 300
                         ***  ** *   * **  ***  * *    *  * * *    **** *****    **

consensus_10589#2      TTTCCCTTACGGTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGTATTAATTAA 489
consensus_10589#3      TTTCCCTTACGGTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGTATTAATT-- 347
consensus_10589#1      TTTCCCTTACGGTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGTATTAATTAA 520
consensus_10589#0      TTTCCCTTACGGTGGTCAAGAAAGAAAAATGAATCACTATGATGTTCTTGTATTAATTAA 534
consensus_10589#4      TACCTCCAACAACAGCATATTTAGGA---------------------------------- 326
                       *  * *  **    *   *   ** *                                  

consensus_10589#2      ATAACTACAAAAAAATTTTTAAAAAAGTACGAATTCCAAAACCATAATAATC-------- 541
consensus_10589#3      ------------------------------------------------------------
consensus_10589#1      ATAACTACAAAAAAATTTTTAAAAAAGTACGAATTCCAAAACCATAATAATC-------- 572
consensus_10589#0      ATAACTACAAAAAAATTTTTAAAAAAGTACGAATTCCAAAACCATAATAATCGTAAATTA 594
consensus_10589#4      ------------------------------------------------------------
                                                                                   

consensus_10589#2      ------------------------------------------------------------
consensus_10589#3      ------------------------------------------------------------
consensus_10589#1      ------------------------------------------------------------
consensus_10589#0      AATTTTCTTTTTTTTTTTTTTTTGAAAAAAAATCAATCATTTATTATTTCATTCATTCTT 654
consensus_10589#4      ------------------------------------------------------------
                                                                                   

consensus_10589#2      ------------------------------------------------------------
consensus_10589#3      ------------------------------------------------------------
consensus_10589#1      ------------------------------------------------------------
consensus_10589#0      ATTCACCGTTTTTGTTGTCAACCAATTAATGACCATTGAAAAACACCTACCCAGTTTTTT 714
consensus_10589#4      ------------------------------------------------------------
                                                                                   

consensus_10589#2      ------------------------------------------------------------
consensus_10589#3      ------------------------------------------------------------
consensus_10589#1      ------------------------------------------------------------
consensus_10589#0      TTTGTAAAACCAAATGATAATCATTTTTCTGAATAAAATTTGTTTATTATATAAAAAAAA 774
consensus_10589#4      ------------------------------------------------------------
                                                                                   

consensus_10589#2      --------------------------------------------
consensus_10589#3      --------------------------------------------
consensus_10589#1      --------------------------------------------
consensus_10589#0      AAAAAAAAAAAAAAAAAATCAGCCATGCAGCTGCATTACCGACT 818
consensus_10589#4      --------------------------------------------