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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10590#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 428 fasta sequence
[ATCATGGAGCA-CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG-CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATCCC]
[+] EMBL CD069903 [ATCTTTGATCA CCGCGAAAGCGCACGATCCCAGGACTTTGCCCATGACGTCAGAACCGGGAGCG CCTACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ]
[+] EMBL CD069898 [ TCATTGAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ]
[+] EMBL CD069840 [ TCATTGAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCATGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ]
[+] EMBL CD069838 [ TCTTGGAGCA CCGCGAAAGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCTACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ]
[+] EMBL CD069915 [ TCATTTAGCA CCGCGATAGCGCATGATCCCACGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGCGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCATATGCTCAAGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ]
[+] EMBL CD069846 [ TCTTTGAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAAGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAAGCGTGCTGCTGGGGAGACATTTTCGTCGCTCATACATCGATC ]
[-] EMBL CD069905 [ CACGGAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACAT AATCCC]
[-] EMBL CD069928 [ CACGGAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCATCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCTTCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATC ATACC]
[-] EMBL CD069916 [ CACGGAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCAATCC ]
[-] EMBL CD069828 [ CACGGAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGCCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCGTCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCAATCC ]
[-] EMBL CD069797 [ CACGGAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCAAACC ]
[-] EMBL CD069811 [ CACGGAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGGCGGCATTGGGCTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATCC ]
[+] EMBL CD069856 [ ttATTGAGCA CCGCNGAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGCTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ]
[+] EMBL CD069894 [ tctcGGAGCA CCGCGAAAGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGGGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ]
[-] EMBL CD069832 [ cacGAGCACCCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAG ACCCGGAGCGNCCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCA TGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCGGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATCC ]
[+] EMBL CD069866 [ ttAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAAGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ]
[+] EMBL CD069864 [ tctgngaCA CCGCGAA GCGCACGATCCCAGNA CTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGGCTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ]
[+] EMBL CD069896 [ GCACGACCCCAGNACCTNGCCCATGACGNCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCAACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||