cluster # 10596

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Schistosoma mansoni
cluster # 10596 cluster # 10596 Sequences # 18 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10596#0 length = 1053 sequences # 7
consensus_10596#1 length = 648 sequences # 4

consensus_10596#2 length = 637 sequences # 4
consensus_10596#3 length = 618 sequences # 1
consensus_10596#4 length = 388 sequences # 2

consensusID : consensus_10596#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1053
fasta sequence

                              [ATTCGGCACGCAGAAAACATTGATTGCTGCATGAAGCACCTGTGGCTTAGAGAAAACGTATTGTAACGCCTGCAAGAAATCCTTCGCAAATAACAAATCTTTTACTGCCCATCTGATTTCGAAGCGCCATATACATAACAGCCACTTGTTCAAGACGAAAACTGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGACCCCGTCCAAGTAGCATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGTTACCATCTGGTACTGTTCTAGGTCACCGGAAGATGAGAACAATTTATAAGCAACACTTGGCTGCTACAGACAAAGCTAAATTATCGAACCGTGATAATGGACAGAAGAGCGTTTGTGTACGACGTCCAGACTTCAAAGCCTTAATGCAGTATAGGTCTAACGCTGACTCGGAGAGATATTTAAACGAACAAAGAAAGTATTGGGACTTAGTAACTGGTGTTCAAGGTAATTTCCACAATCGCCTTCATCTTCGTCGACAGTACTAGATATTTGAGGATTTAATATAATTTTAAAAAAT-CCATTT]

[+] EMBL CD081167             [ATTCGGCACGCAGAAAACATTGATTGCTGCATGAAGCACCTGTGGCTTAGAGAAAACGTATTGTAACGCCTGCAAGAAATCCTTCGCAAATAACAAATCTTTTACTGCCCATCTGATTTCGAAGCGCCATATACATAACAGCCACTTGTTCAAGACGAAAACTGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGACCCCGTCCAAGTAGCATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGTTACCATCTGGTACTGTTCTAGGTCACCGGAAGATGAGAACAATTTATAAGCAACACTTGGCTGCTACAGACAAAGCTAAATTATCGAACCGTGATAATGGACAGAAGAGCGTTTGTGTACGACGTCCAGACTTAAAAGCC TAATGCAGTATANGTCTAACGCTGACTNCGAGAGATATTTAAACGAACCAAGAAAGTATTGGGACTTAGTAACTGGTGTTCAAGGTAATTTCCAC ATCGCCTTCATCTTCGTCGAC GTACTAGATATTTGAGGGATTAATAT ANTNTAAAAAAT CCAT  ]
[-] EMBL CD074987             [                                                                                                                                                                                                                                                       GACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGACCCCGTCCAAGTAGCATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGTTACCATCTGGTACTGTTCTAGGTCACCGGAAGATGAGAACAATTTATAAGCAACACTTGGCTGCTACAGACAAAGCTAAATTATCGAACCGTGATAATGGACAGAAGAGCGTTTGTGTACGACGTCCAGACTTCAAAGCCTTAATGCAGTATAGGTCTAACGCTGACTCGGAGAGATATTTAAACGAACAAAGAAAGTATTGGGACTTAGTAACTGGTGTTCAAGGTAATTTCCACAATCGCCTTCATCTGAGTCGACAGTACTAGATATTTGAGGATTTAATATAATTTTAAAAGATACCATTT]
[-] EMBL CD074019             [                                                                                                                                                                                                                                                                                                                                                                TTTAGTG TCCATTCCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGACCCCGTCCAAGTAGCATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGTTACCATCTGGTACTGTTCTAGGTCACCGGAAGATGAGAACAATTTATAAGCAACACTTGGCTGCTACAGACAAAGCTAAATTATCGAACCGTGATAATGGACAGAAGAGCGTTTGTGTACGACGTCCAGACTTCAAAGCCTTAATGCAGTATAGGTCTAACGCTGACTCGGAGAGATATTTAAACGAACAAAGAAAGTATTGGGACTTAGTAACTGGTGTTCAAGGTAATTTCCACAATCGCCTTCATCTTCGTCGACAGTACTAGATATTTGAGGATTTAATATAATTTTAAAAAAT CCATTT]
[-] EMBL CD074759             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGGAAGGATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGACCCCGTCCAAGTAGCATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGTTACCATCTGGTACTGTTTTAGGTCCCCGGAAGATGAGAACAATTTATAAGCAACACTTGGCTGCTACAGACAAAGCTAAATTATCGAACCGTGATAATGGACAGAAGAGCGTTTGTGTACGACGTCCAGACTTCAAAGCCTTAATGCAGTATAGGTCTAACGCTGACTCGGAGAGATATTTAAACGAACAAAGAAAGTATTGGGACTTAGTAACTGGTGTTCAAGGTAATTTCCACAATCGCCTTCATCTTCGTCGACAGTACTAGATATTTGAGGATTTAATATAATTTTAAAAAAT CCATTT]
[+] EMBL CD188589             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATAGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGTTACCATCTGGTACTGTTCTAGGTCACCGGAAGATGAGAACAATTTATAAGCAACACTTGGCTGCTACAGACAAAGCTAAATTATCGAACCGTGATAATGGACAGAAGAGCGTTTGTGT                                                                                                                                                                                           ]
[-] EMBL CD189870             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGTTACCATCTGGTACTGTTCTAGGTCATCGGAAGATGAGAACAATTTATAAGCAACACTTGGCTGCTACAGACAAAGCTAAATTATCGGACCGTGATAATGGACAGAAGAGCGTTTGTGTACGACGTCCAGACTTCAAA                                                                                                                                                                        ]
[-] EMBL CD188812             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGTTACCATCTGGTACTGTTCTAGGTCACCGGAAGATGAGAACAATTTATAAGCAACACTTGGCTGCTACAGACAAAGCTAAATTATCGAACCGTGATAATGGACAGAAGAGCGTTTGT                                                                                                                                                                                             ]




>consensus_10596#0
ATTCGGCACGCAGAAAACATTGATTGCTGCATGAAGCACCTGTGGCTTAGAGAAAACGTA
TTGTAACGCCTGCAAGAAATCCTTCGCAAATAACAAATCTTTTACTGCCCATCTGATTTC
GAAGCGCCATATACATAACAGCCACTTGTTCAAGACGAAAACTGCTCAAACAGTCATCAG
TTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTT
GTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAA
ACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGT
TCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGT
GGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGTAGCTGTGTGGAAGG
ATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGG
CCACAAACAAGTATGGTTTGGAGTAGAAGACCCCGTCCAAGTAGCATTACTGGTAGCTGA
AGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGG
TGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTC
AGATGATGAAGACGTTTATGAAGTACGGTTACCATCTGGTACTGTTCTAGGTCACCGGAA
GATGAGAACAATTTATAAGCAACACTTGGCTGCTACAGACAAAGCTAAATTATCGAACCG
TGATAATGGACAGAAGAGCGTTTGTGTACGACGTCCAGACTTCAAAGCCTTAATGCAGTA
TAGGTCTAACGCTGACTCGGAGAGATATTTAAACGAACAAAGAAAGTATTGGGACTTAGT
AACTGGTGTTCAAGGTAATTTCCACAATCGCCTTCATCTTCGTCGACAGTACTAGATATT
TGAGGATTTAATATAATTTTAAAAAATCCATTT

consensusID : consensus_10596#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 648
fasta sequence

                              [CTCCAGGCCAAAATTCGGCACGAGGGTCAAGGCCAGGCACTGTTACGGATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGGAAAACTGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGAACCCCGTCCAAGTAGCATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTT]

[+] EMBL CD079759             [CTCCAGGCCAAAATTCGGCACGAGGGTCAAGGCCAGGCACTGTTACGGATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGGAAAACTGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGAACCCCGTCCAAGTAGCATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTT]
[-] EMBL CD181069             [                            AAGGCCAGGCACTGTTACGGATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGGAAAACGGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCNTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTATTTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAG ACCCCGTCCAAGTAGCATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTAAAG                                                                       ]
[-] EMBL CD094865             [                                                ATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGGAAAACCGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTCTTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTA                                                                                                                                                                                                                      ]
[-] EMBL CD095174             [                                                ATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGGAAAACTGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACGTATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTA                                                                                                                                                                                                                      ]




>consensus_10596#1
CTCCAGGCCAAAATTCGGCACGAGGGTCAAGGCCAGGCACTGTTACGGATTGGGAATATC
ACGTTAGCAGACGTGGTTTTGGTTGGAAAACTGCTCAAACAGTCATCAGTTCTACTAAAC
CTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACC
GCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACT
TGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAG
AAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAAC
GATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGTAGCTGTGTGGAAGGATCAGACAATA
CTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAG
TATGGTTTGGAGTAGAAGAACCCCGTCCAAGTAGCATTACTGGTAGCTGAAGCAGAAGAA
GAGTTAAATGACGATTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTG
TTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTT

consensusID : consensus_10596#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 637
fasta sequence

                              [CGGATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGCTCTCACATCGCACGCTCCATCGCTACTAGAGCTACCTTCAAATAAGACGCAACCCACCAAAGGCATGACGTACTTATGTTCTTCCTGTAAGGCTGATGTGCCTATCTCAGAAAGAATCAACCATGTCAGGAGCGATTGGCATATATACAACCTAAAACGTGTCGTTTCTGATCTACTACCGATATCTGAAGACATGTTTGTACATAAAAAACAATTGATTGCTGCAGAAGCACCTGTGGCTATAGAGAAAACGTATTGTAACGCCTGCAAGAAATCCTTCGCAAATAACAAATCTTTTACTGCCCATCTGATTTCGAAGCGCCATATACATAACAGCCACTTGTTCAAGACGAAAACTGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGGTTGTTA]

[+] EMBL CD061133             [CGGATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGCTCTCACATCGCACGCTCCATCGCTACTAGAGCTACCTTCAAATAAGACGCAACCCACCAAAGGCATGACGTACTTATGTTCTTCCTGTAAGGCTGATGTGCCTATCTCAGAAAGAATCAACCATGTCAGGAGCGATTGGCATATATACAACCTAAAACGTGTCGTTTCTGATCTACTACCGATATCTGAAGACATGTTTGTACATAAAAAACAATTGATTGCTGCAGAAGCACCTGTGGCTACGGAGAAAACGTATTGT                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD189645             [   ATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGCTCTCACATCGCACGCTCCATCGCTACTAGAGCTACCTTCAAATAAGACGCAACCCACCAAAGGCATGACGTACTTATGTTCTTCCTGTAAGGCTGATGTGCCTATCTCAGAAAGAATCAACCATGTCAGGAGCGATTGGCATATATACAACCTAAAACGTGTCGTTTCTGATCTACTACCGATATCTGAAGACATGTTTGTACATAAAAAACAATTGATTGCTGCAGAAGCACCTGTGGCTATAGAGAAAACGTATTGTAACGCCTGCAAGAAATCCTTCGCAAATAACAAATCTTTTACTGCCCATCTGATTTCGAAGCGCCATATACATAACAGCCACTTGTTCAAGACGAAAACTGCTCAAACAGTCATCAGTTCTA                                                                                                                                                                                                                        ]
[+] EMBL BF936410             [            ATCACGTTAGCAGACGTGGTTTTGGTTGCTCTCACATCGCACGCTCCATCGCTACTAGAGCTACCTTCAAATAAGACGCAACCCACCAAAGGCATGACGTACTTATGTTCTTCCTGTAAGGCTGATGTGCCTATCTCAGAAAGAATCAACCATGTCAGGAGCGATTGGCATATATACAACCTAAAACGTGTCGTTTCTGATCTACTACCGATATCTGAAGACATGTTTGTACATAAAAAACAATTGATTGCTGCAGAAGCACCTGTGGCTATAGAGAAAACGTATTGTAACGCCTGCAAGAAATCCTTCGCAAATAACAAATCTTTTACTGCCCATCTGATTTCGAAGCGCCATATACATAACAGCCACTTGTTCAAGACGAAAACTGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGGTTGTTA]
[-] EMBL CD095006             [                                                                                                                                                                                                                                                                                                                                     ATAACAAATCTTTTACTGCCCATCTGATTTCGAAGCGCCATATACATAACAGCCACTTGTTCAAGACGAAAACTGCCCAAACAGTCATCAGTTC                                                                                                                                                                                                                          ]




>consensus_10596#2
CGGATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGCTCTCACATCGCACGCTCCA
TCGCTACTAGAGCTACCTTCAAATAAGACGCAACCCACCAAAGGCATGACGTACTTATGT
TCTTCCTGTAAGGCTGATGTGCCTATCTCAGAAAGAATCAACCATGTCAGGAGCGATTGG
CATATATACAACCTAAAACGTGTCGTTTCTGATCTACTACCGATATCTGAAGACATGTTT
GTACATAAAAAACAATTGATTGCTGCAGAAGCACCTGTGGCTATAGAGAAAACGTATTGT
AACGCCTGCAAGAAATCCTTCGCAAATAACAAATCTTTTACTGCCCATCTGATTTCGAAG
CGCCATATACATAACAGCCACTTGTTCAAGACGAAAACTGCTCAAACAGTCATCAGTTCT
ACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTC
TGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCCAAACAA
AGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCA
TTTCCAGAAAGATTAACCGATCCTGCCGGGGTTGTTA

consensusID : consensus_10596#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 618
fasta sequence

                              [GTCAAGGTCAAGGCCAGGCACTGTTACGGATTGGGAATATCAAAAACTGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCNNNNNNNNNNNACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCNNNNNNNNTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGACCCCGTCCAAGTAGCATTACTGGTAGTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGNTACCATCTGGTAC]

[+] EMBL CD080925             [GTCAAGGTCAAGGCCAGGCACTGTTACGGATTGGGAATATCAAAAACTGCTCAAACAGTCATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGTGCNNNNNNNNNNNACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGTATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCNNNNNNNNTACGGTAGCTGTGTGGAAGGATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGACCCCGTCCAAGTAGCATTACTGGTAGTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGNTACCATCTGGTAC]




>consensus_10596#3
GTCAAGGTCAAGGCCAGGCACTGTTACGGATTGGGAATATCAAAAACTGCTCAAACAGTC
ATCAGTTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCA
TGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCACTTGATAGT
GCNNNNNNNNNNNACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTT
AGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTGAATTAGGACGT
ATCGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCNNNNNNNNTACGGTAGCTGTGTG
GAAGGATCAGACAATACTCGGATCTCCCTATCTGCTGTCCGCAGTCATATGTTGGACAAA
CCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGACCCCGTCCAAGTAGCATTACTGGTA
GTGCGAGATAAATTATCCTAAAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTA
CGACCAGTCAGTCGTTGCACCATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGT
ACGGNTACCATCTGGTAC

consensusID : consensus_10596#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 388
fasta sequence

                              [GGCACTGTTACGGATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGGAGTATCAAGTGTGCTCTATGGATTCAAAATTAAGGGTTCAATAAAGGAGGGTAATCATTGAACAACATCGATCGTTATTGTCAGGATGTTTTTTGTACATATCTGATCACCATTAATCCATATATATAAGGCCTCTGATATACTCATTCCTGTTGTCTTCAGGAAAACTGCTCAAACAGTCATCAGTTCTACTGAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCGCTTGATAGTGCCAAACAAAGCGAC-TGCTTGCCATAAGCAAGGGGA]

[-] EMBL CD061186             [GGCACTGTTACGGATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGGAGTATCAAGTGTGCTCTATGGATTCAAAATTAAGGGTTCAATAAAGGAGGGTAATCATTGAACAACATCGATCGTTATTGTCAGGATGTTTTTTGTACATATCTGATCACCATTAATCCATATATATAAGGCCTCTGATATACTCATTCCTGTTGTCTTCAGGAAAACTGCTCAAACAGTCATCAGTTCTACTGAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCGCTTGATAGTGCCAAACAAAGCGAC TGCTTGCCATAAGCAAGGGGA]
[-] EMBL CD061190             [GGCACTGTTACGGATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGGAGTATCAAGTGTGCTCTATGGATTCAAAATTAAGGGTTCAATAAAGGAGGGTAATCATTGAACAACATCGATCGTTATTGTCAGGATGTTTTTTGTACATATCTGATCACCATTAATCCATATATATAAGGCCTCTGATATACTCATTCCTGTTGTCTTCAGGAAAACTGCTCAAACAGTCATCAGTTCTACTGAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCGCTTGATAGTGCCAAACAAAGCGACTTGCTgc               ]




>consensus_10596#4
GGCACTGTTACGGATTGGGAATATCACGTTAGCAGACGTGGTTTTGGTTGGAGTATCAAG
TGTGCTCTATGGATTCAAAATTAAGGGTTCAATAAAGGAGGGTAATCATTGAACAACATC
GATCGTTATTGTCAGGATGTTTTTTGTACATATCTGATCACCATTAATCCATATATATAA
GGCCTCTGATATACTCATTCCTGTTGTCTTCAGGAAAACTGCTCAAACAGTCATCAGTTC
TACTGAACCTGCAGGAGAAAACTGTTTGACAGAACCATTACCGCTGGGGTCATGTTTGTT
CTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCGCTTGATAGTGCCAAACA
AAGCGACTGCTTGCCATAAGCAAGGGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10596#1      ------------------------------------------------------------
consensus_10596#3      ------------------------------------------------------------
consensus_10596#0      ATTCGGCACGCAGAAAACATTGATTGCTGCATGAAGCACCTGTGGCTTAGAGAAAACGTA 60
consensus_10596#2      ------------------------------------------------------------
consensus_10596#4      ------------------------------------------------------------
                                                                                   

consensus_10596#1      ------CTCCAGGCCAAAATTCGGCACGAGGGTCAAGGCCA--GGCACTGTTACGGATTG 52
consensus_10596#3      -------------------------GTCAAGGTCAAGGCCA--GGCACTGTTACGGATTG 33
consensus_10596#0      TTGTAACGCCTGCAAGAAATCCTTCGCAAATAACAAATCTTTTACTGCCCATCTGATTTC 120
consensus_10596#2      -----------------------------------------------------CGGATTG 7
consensus_10596#4      ------------------------------------------------------------
                                                                                   

consensus_10596#1      GGAATATCACGT---TAGCAGACGTGGTTTTGGTTGGAAAACTGCTCAAACAGTCATCAG 109
consensus_10596#3      GGAATATCA----------------------------AAAACTGCTCAAACAGTCATCAG 65
consensus_10596#0      GAAGCGCCATATACATAACAGCCACTTGTTCAAGACGAAAACTGCTCAAACAGTCATCAG 180
consensus_10596#2      GGAATATCACGT---TAGCAGACGTGGTTTTGGTT---GCTCTCACATCGCACGCTCCAT 61
consensus_10596#4      ------------------------------------------------------------
                                                                                   

consensus_10596#1      TTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTAC-CGCTGGGGTCATGTT 168
consensus_10596#3      TTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTAC-CGCTGGGGTCATGTT 124
consensus_10596#0      TTCTACTAAACCTGCAGGAGAAAACTGTTTGACAGAACCATTAC-CGCTGGGGTCATGTT 239
consensus_10596#2      CGCTACTAGAGCTACCTTCAAATAAGACGCAACCCACCAAAGGCATGACGTACTTATGTT 121
consensus_10596#4      ------------------------------------------------------------
                                                                                   

consensus_10596#1      TGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCAC-TTGATAGTGCC 227
consensus_10596#3      TGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCAC-TTGATAGTGCN 183
consensus_10596#0      TGTTCTGTGACCGCTACATATCACTGGATTATTTGCCGAATGAGTCAC-TTGATAGTGCC 298
consensus_10596#2      CTTCCTGTAAG-GCTG-ATGTGCCTATCTCAG--AAAGAATCAACCATGTCAGGAGCGAT 177
consensus_10596#4      -----------------------------------GGCACTGTTACGGATTGGGAATATC 25
                                                             * *    *   *    *     

consensus_10596#1      AAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGT 287
consensus_10596#3      NNNNNNNNNNACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGT 243
consensus_10596#0      AAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGCACAAATTTAGT 358
consensus_10596#2      TGGCATATATACAACCTAAAACGTGTCGTTTCTGATCTACTACCGATATCTGAAGACATG 237
consensus_10596#4      ACGTTAGCAGACGTGGTTTTGGTTGGAGTATCAAGTGTGCTCTATGGATTCAAAATTAAG 85
                                 **           **   *        *  *           **   *  

consensus_10596#1      GTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTG-AATTAGGACGTAT 346
consensus_10596#3      GTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTG-AATTAGGACGTAT 302
consensus_10596#0      GTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGTTGTTAATTG-AATTAGGACGTAT 417
consensus_10596#2      TTTGTACATAAAAAACAATTGATTGCTGCAGAAGCACCTGTGGCTATAGAGAAAACGTAT 297
consensus_10596#4      GGTTCAAT--AAAGGAGGGTAATCATTG-AACAACATCGATCGTTATTGTCAGGATGTTT 142
                         *  *     *       * *    *             *   *      *  * ** *

consensus_10596#1      CGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGT--AGCTG-TGT 403
consensus_10596#3      CGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCNNNNNNNNTACGGT--AGCTG-TGT 359
consensus_10596#0      CGTGGGGGAGGAACGATGTTGCTTGGCATGTGGTCGTCAGTTTTACGGT--AGCTG-TGT 474
consensus_10596#2      TGTAACGCCTGCAAGAAATC-CTTCGCAAATAA-CAAATCTTTTACTGCCCATCTGATTT 355
consensus_10596#4      TTTGT--------ACATATCTGATCACCATTAATCCATATATATAAGGC--CTCTGATAT 192
                         *            *  *    *  *   *   *        **  *     *** * *

consensus_10596#1      GGAAGGATCAGACA----ATACTCGGATCTCCCTATCTG---CTGTCCG--CAGTCATAT 454
consensus_10596#3      GGAAGGATCAGACA----ATACTCGGATCTCCCTATCTG---CTGTCCG--CAGTCATAT 410
consensus_10596#0      GGAAGGATCAGACA----ATACTCGGATCTCCCTATCTG---CTGTCCG--CAGTCATAT 525
consensus_10596#2      CGAAGCGCCATATACATAACAGCCACTTGTTCAAGACGAAAACTGCTCAAACAGTCATCA 415
consensus_10596#4      ACTCATTCCTGTTG-------------TCTTCAGGAAAA---CTGCTCAAACAGTCATCA 236
                               *                  * * *          ***  *   *******  

consensus_10596#1      GTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGAACCCCGTCCAAGTAG 514
consensus_10596#3      GTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGA-CCCCGTCCAAGTAG 469
consensus_10596#0      GTTGGACAAACCTGGCCACAAACAAGTATGGTTTGGAGTAGAAGA-CCCCGTCCAAGTAG 584
consensus_10596#2      GTTCTACTAAACCTGCAGGAGAAAACTGT----TTGACAGAACCATTACCGCTGGGGT-- 469
consensus_10596#4      GTTCTACTGAACCTGCAGGAGAAAACTGT----TTGACAGAACCATTACCGCTGGGGT-- 290
                       ***  **  * *  **   * * ** * *    * **    *  *   ***     **  

consensus_10596#1      CATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTA 574
consensus_10596#3      CATTACTGGTAG-----------------------------TGCGAGATAAATTATCCTA 500
consensus_10596#0      CATTACTGGTAGCTGAAGCAGAAGAAGAGTTAAATGACGATTGCGAGATAAATTATCCTA 644
consensus_10596#2      CATGTTTGTTCTGTGACCGCTACATATCACTGGATTAT--TTGCCGAATGAGTCACTTGA 527
consensus_10596#4      CATGTTTGTTCTGTGACCGCTACATATCACTGGATTAT--TTGCCGAATGAGTCGCTTGA 348
                       ***   ** *                               ***   ** * *      *

consensus_10596#1      AAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCAC 634
consensus_10596#3      AAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCAC 560
consensus_10596#0      AAGCTGCTCTTGCAGGTGGTGAGCTGTTTAGTCAGTTTTACGACCAGTCAGTCGTTGCAC 704
consensus_10596#2      TAG----TGCCAAACAAAGCGACTTGGCCAAACGTGTCCTAAGTCACATGTTTGATGCGC 583
consensus_10596#4      TAG----TGCCAAACAAAGCGA-CTGCTT-GCCATAAGCAAGGGGA-------------- 388
                        **    *     *    * **  **      *            *              

consensus_10596#1      -CATCTTTCATACTT--------------------------------------------- 648
consensus_10596#3      -CATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGNTACCATCTGGTAC- 618
consensus_10596#0      -CATCTTTCATACTTTCAGATGATGAAGACGTTTATGAAGTACGGTTACCATCTGGTACT 763
consensus_10596#2      ACAAATTTAGTGTTCCATTTCCAGAAAGATTAACCGATCCTGCCGGGGTTGTTA------ 637
consensus_10596#4      ------------------------------------------------------------
                                                                                   

consensus_10596#1      ------------------------------------------------------------
consensus_10596#3      ------------------------------------------------------------
consensus_10596#0      GTTCTAGGTCACCGGAAGATGAGAACAATTTATAAGCAACACTTGGCTGCTACAGACAAA 823
consensus_10596#2      ------------------------------------------------------------
consensus_10596#4      ------------------------------------------------------------
                                                                                   

consensus_10596#1      ------------------------------------------------------------
consensus_10596#3      ------------------------------------------------------------
consensus_10596#0      GCTAAATTATCGAACCGTGATAATGGACAGAAGAGCGTTTGTGTACGACGTCCAGACTTC 883
consensus_10596#2      ------------------------------------------------------------
consensus_10596#4      ------------------------------------------------------------
                                                                                   

consensus_10596#1      ------------------------------------------------------------
consensus_10596#3      ------------------------------------------------------------
consensus_10596#0      AAAGCCTTAATGCAGTATAGGTCTAACGCTGACTCGGAGAGATATTTAAACGAACAAAGA 943
consensus_10596#2      ------------------------------------------------------------
consensus_10596#4      ------------------------------------------------------------
                                                                                   

consensus_10596#1      ------------------------------------------------------------
consensus_10596#3      ------------------------------------------------------------
consensus_10596#0      AAGTATTGGGACTTAGTAACTGGTGTTCAAGGTAATTTCCACAATCGCCTTCATCTTCGT 1003
consensus_10596#2      ------------------------------------------------------------
consensus_10596#4      ------------------------------------------------------------
                                                                                   

consensus_10596#1      --------------------------------------------------
consensus_10596#3      --------------------------------------------------
consensus_10596#0      CGACAGTACTAGATATTTGAGGATTTAATATAATTTTAAAAAATCCATTT 1053
consensus_10596#2      --------------------------------------------------
consensus_10596#4      --------------------------------------------------