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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10597#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1078 fasta sequence
[TTTTTGGCACGAGGGAGCCCTTTGGAGGGTGCCGAAATACAGTCAACTTCCAGCAAGGTTGTTGGTGTAGATTTAACTTGAAATCATTGCTGACCGCATCTCTTTCCATCAATATCATATTCTGGTGGTGAGTTATGGCCAACATAGGAATGTGGGCTGTGGTTGTTTTCGGTTGCGCCATCTTAACTTGGTTTGATTTTTGGGGATTAAAAGGCAG-CAGCAATTCAGAGAAAACCATACCAATTCTAAAAAAGCCAATAAATCCACTTCCTACACTTCAGTTCATGTTTTGCGTTTCCTGAGGGTATCGGCGGGTGTTCGAGGAGATGTCACGGATCGTCTTACAAAAGTATCCATCTTTTGTTATAGAAGGCGACACGTATCCTCCACCCGCCTGGCGAGCCCACTTGGCAAAATCCTTACAATTCCTGAAATATTCTATTATTCTTATGACTGTGTTTGGTTTCGACCTCTTTGGATATCTTGGTTACCCTACTCCTAACTTTGTCTCATATGCCATGCAAAATAAAGTTTCTTTCTGTTTGATGACCTTTCTACTTGGAAATGTTATTGAAGGACAGTTGCTATCTACGGGCGCTTTCGAAATATACTTAGATGATATCCCAGTCTGGTCGAAATTGTACACAAATCGTATCCCTCAACCA-GAGGAACTTCTTCACATAATTGA-CAATCACGTAAAACT-CCGAGATTC-AA-CAAAGACAATACAATCCGTCGG-TCCACCTCTGTAGTATTTAATGCATACAACTGGCTTTAGTTTTTTTTACCAATAAAAGCGCAAGGTCGTATCATATTTGAGCTTTTTCTGGCTTTATGACAGTTCCCACATCAATCTCTGTTTAGAGAATGTGGTTAACTTGATGCTTACCT-GTTCTAGTTCAAATATGTCGACTAGTCTTTTTACCCCTATTGTATGTGATGTATTTTCTTAAAATTGACTGT--CTCCAGTTAAACTTGCTCCTTTGTATATTGTTGAAAATTTTCATTTGTGTAAAGTGATATTCATTTACTTATATGAAAATAAATGTCTTGTAATCTTCCCGAAAAAAAAAAAAAAAAA]
[+] EMBL CD079585 [TTTTTGGCACGAGGGAGCCCTTTGGAGGGTGCCGAAATACAGTCAACTTCCAGCAAGGTTGTTGGTGTAGATTTAACTTGAAATCATTGCTGACCGCATCTCTTTCCATCAATATCATATTCTGGTGGTGAGTTATGGCCAACATAGGAATGTGGGCTGTGGTTGTTTTCGGTTGCGCCATCTTAACTTGGTTTGATTTTTGGGGATTAAAAGGCAG CAGCAATTCAGAGAAAACCATACCAATTCTAAAAAAGCCAATAAATCCACTTCCTACACTTCAGTTCATGTTTTGCGTTTCCTGAGGGTATCGGCGGGTGTTCGAGGAGATGTCACGGATCGTCTTACAAAAGTATCCATCTTTTGTTATAGAAGGCGACACGTATCCTCCACCCGCCTGGCGAGCCCACTTGGCAAAATCCTTACAATTCCTGAAATATTCTATTATTCTTATGACTGTGTTTGGTTTCGACCTCTTTGGATATCTTGGTTACCCTACTCCTAACTTTGTCTCATATGCCATGCAAAATAAAGTTTCTTTCTGTTTGATGACCTTTCTACTTGGAAATGTTATTGAAGGACAGTTGCTATCTACGGGCGCTTTCGAAATATACTTAGATGATATCCCAGTCTGGTCGAAATTGTACACAAATCGTATCCCTCAACCA GAGGAACTTCTTCACATAATTGA CAATCACGTAAAACT CCGAGATTCAAA CAAg ]
[+] EMBL CD082333 [ AAGGCAGTCAGCAATTCAGAGATTTTCATACCAATTCTAAAAACGCCAATAAATCCACTTCCTACACTTCAGTTCATGTTTTGCGTTTCCTGAGGGTATCGGCGGGTGTTCGAGGAGATGTCACGGATCGTCTTACAAAAGTATCCATCTTTTGTTATAGAAGGCGACACGTATCCTCCACCCGTCTGGCGAGCCCACTTGGCAAAATCCTTACAATTCCTGAAATATTCTATTATTCTTATGACTGTGTTTGGTTTCGACCTCTTTGGATATCTTGGTTACCCTACTCCTAACTTTGTCTCATATGCCATGCAAAATAAAGTTTCTTTCTGTTTGATGACCTTTCTACTTGGAAATGTTATTGAAGGACAGTTGCTATCTACGGGCGCTTTCGAAATATACTTAGATGATATCCCAGTCTGGTCGAAATTGTACACAAATCGTATCCCTCAACCA GAGGAACTTCTTCACATAATTGA CAATCACGTAAAACT CCGAGATTC AA CAAAGACAATACAATCCGTCGG TCCACCTCTGTAGTATTTAATGCATACAACTGGCTNTAGTTNTTTTTACCAATAAAAGCGCAAGGTCGTATCATATTTGAGCTNTTTCTGGCTTTATGACAGTTCCCACATCAATCTCTGTTTAGAGAATGTGGTTAACTTGATGCTTACCTNNGTCTAG TC AATATGTCGACTAGTCTTTTTACCCCTA TGNATGTGATGTATTTTCTTAAAA TGACTGTNNCT CAG TAAANCTGCT CTTGNNATATTG TGAAA TTTCATTTGNGT AAGNGATA TCATTTACTTA ATGAAAATAAATGNCTgt ]
[-] EMBL CD073846 [ CGCCTGGCGAGCCCACTTGGCAAAATCCTTACAATTCCTGAAATATTCTATTATTCTTATGACTGTGTTTGGTTTCGACCTCTTTGGATATCTTGGTTACCCTACTCCTAACTTTGTCTCATATGCCATGCAAAATAAAGTTTCTTTCTGTTTGATGACCTTTCTACTTGGAAATGTTATTGAAGGACAGTTGCTATCTACGGGCGCTTTCGAAATATACTTAGATGATATCCCAGTCTGGTCGAAATTGTACACAAATCGTATCCCTCAACCA GAGGAACTTCTTCACATAATTGA CAATCACGTAAAACT CCGAGATTC AA CAAAGACAATACAATCCGTCGG TCCACCTCTGTAGTATTTAATGCATACAACTGGCTTTAGTTTTTTTTACCAATAAAAGCGCAAGGTCGTATCATATTTGAGCTTTTTCTGGCTTTATGACAGTTCCCACATCAATCTCTGTTTAGAGAATGTGGTTAACTTGATGCTTACCT GTTCTAGTTCAAATATGTCGACTAGTCTTTTTACCCCTATTGTATGTGATGTATTTTCTTAAAATTGACTGT CTCCAGTTAAACTTGCTCCTTTGTATATTGTTGAAAATTTTCATTTGTGTAAAGTGATATTCATTTACTTATATGAAAATAAATGTCTTGTA ]
[-] EMBL CD077046 [ GGTTACCCTACTCCTAACTTTGTCTCATATGCCATGCAAAATAAAGTTTCTTTCTGTTTGATGACCTTTCTACTTGGAAATGTTATTGAAGGACAGTTGCTATCTACGGGCGCTTTCGAAATATACTTAGATGATATCCCAGTCTGGTCGAAATTGTACACAAATGGTATCCCTCAACCA GAGGAACTTCTTCACATAATTGA CAATCACGTAAAACT CCGAGATTC AA CAAAGACAATACAATCCGTCGG TCCACCTCTGTAGTATTTAATGCATACAACTGGCTTTAGTTTTTTTTACCAATAAAAGCGCAAGGTCGTATCATATTTGAGCTTTTTCTGGCTTTATGACAGTTCCCACATCAATCTCTGTTTAGAGAATGTGGTTAACTTGATGCTTACCT GTTCTAGTTCAAATATGTCGACTAGTCTTTTTACCCCTATTGTATGTGATGTATTTTCTTAAAATTGACTGT CTCCAGTTAAACTTGCTCCTTTGTATATTGTTGAAAATTTTCATTTGTGTAAAGTGATATTCATTTACTTATATGAAAATAAAGGTCTTGT ]
[-] EMBL CD075931 [ TTGTCTCATATGCCATGCAAAATAAAGTTTCTTTCTGTTTGATGACCTTTCTACTTGGAAATGTTATTGAAGGACAGTTGCTATCTACGGGCGCTTTCGAAATATACTTAGATGATATCCCAGTCTGGTCGAAATTGTACACAAATCGTATCCCTCAACCA GAGGAACTTCTTCACATAATTGA CAATCACGTAAAACT CCGAGATTC AA CAAAGACAATACAATCCGTCGG TCCACCTCTGTAGTATTTAATGCATACAACTGGCTTTAGTTTTTTTTACCAATAAAAGCGCAAGGTCGTATCATATTTGAGCTTTTTCTGGCTTTATGACAGTTCCCACATCAATCTCTGTTTAGAGAATGTGGTTAACTTGATGCTTACCT GTTCTAGTTCAAATATGTCGACTAGTCTTTTTACCCCTATTGTATGTGATGTATTTTCTTAAAATTGACTGT CTCCAGTTAAACTTGCTCCTTTGTATATTGTTGAAAATTTTCATTTGTGTAAAGTGATATTCATTTACTTATATGAAAATAAATGTCTTGTAA ]
[-] EMBL CD075310 [ CCATGCAAAATAAAGTTTCTTTCTGTTTGATGACCTTTCTACTTGGAAATGTTATTGAAGGACAGTTGCTATCTACGGGCGCTTTCGAAATATACTTAGATGATATCCCAGTCTGGTCGAAATTGTACACAAATCGTATCCCTCAACCA GAGGAACTTCTTCACATAATTGA CAATCACGTAAAACT CCGAGATTC AA CAAAGACAATACAATCCGTCGG TCCACCTCTGTAGTATTTAATGCATACAACTGGCTTTAGTTTTTTTTACCAATAAAAGCGCAAGGTCGTATCATATTTGAGCTTTTTCTGGCTTTATGACAGTTCCCACATCAATCTCTGTTTAGAGAATGTGGTTAACTTGATGCTTACCT GTTCTAGTTCAAATATGTCGACTAGTCTTTTTACCCCTATTGTATGTGATGTATTTTCTTAAAATTGACTGT CTCCAGTTAAACTTGCTCCTTTGTATATTGTTGAAAATTTTCATTTGTGTAAAGTGATATTCATTTACTTATATGAAAATAAATGTCTTGTA ]
[-] EMBL AI395351 [ TGTTTGGTGCCCTTTCTACTTGGAAATGTTATTGAAGGACAGTTGCTATCTACGGGCGCTTTCGAAATATACTTAGATGATATCCCAGTCTGGTCGAAATTGTACACAAATCGTATCCCTCAACCA GAGGAACTTCTTCACATAATTGACCAATCACGTAAAACT CCGAGATTC AA CAAAGACAATACAATCCGTCGG TCCACCTCTGTAGTATTTAATGCATACAACTGGCTTTAGTTTTTTTTACCAATAAAAGCGCAAGGTCGTATCATATTTGAGCTTTTTCTGGCTTTATGACAGTTCCCACATCAATCTCTGTTTAGAGAATGTGGTTAACTTGATGCTTACCT GTTCTAGTTCAAATATGTCGACTAGTCTTTTTACCCCTATTGTATGTGATGTATTTTCTTAAAATTGACTGT CTCCAGTTAAACTTGCTCCTTTGTATATTGTTGAAAATTTTCATTTGTGTAAAGTGATATTCATTTACTTATATGAAAATAAATGTCTTGTAATCTTCCCGAAAAAAAAAAAAAAAA ]
[-] EMBL AI395061 [ CTAAACCAGGAGG ACTTCTTCACAT ATTGC CCATCACGTAAAACTCCCGAGATTC AACCAAAGACAATACAATCCGTCGG TCCACCTCTGTAGTATTTAATGCATACAACTGGCTTTAGTTTTTTTTACCAATAAAAGCGCAAGGTCGTATCATATTTGAGCTTTTTCTGGCTTTATGACAGTTCCCACATCAATCTCTGTTTAGAGAATGTGGTTAACTTGATGCTTACCT GTTCTAGTTCAAATATGTCGACTAGTCTTTTTACCCCTATTGTATGTGATGTATTTTCTTAAAATTGACTGT CTCCAGTTAAACTTGCTCCTTTGTATATTGCTGAAAATTTTCATTTGTGTAAAGTGATATTCATTTACTTATATGAAAATAAATGTCTTGTAATCTTCCCGAAAAAAAAAAAAAAAAA]
[-] EMBL AI394938 [ CAATCCTTCGGATCCACCTCTGTAGTATTTAATGCATACAACTGGCTTTAGTCTTTTTTACCAATAAAAGCGCAAGGTCGTATCATATTTGAGCTTTTTCTGGCTTTATGACAGTTCCCACATCAATCTCTGTTTAGAGAATGTGGTTAACTTGATGCTTACCT GTTCTAGTTCAAATATGTCGACTAGTCTTTTTACCCCTATTGTATGTGATGTATTTTCTTAAAATTGACTGT CTCCAGTTAAACTTGCTCCTCTGTATATTGTTGAAAATTTTCATTTGTGTAAAGTGATAGTCATTTACTTATATGAAAATAAATGTCTTGTAATCTTCCCGACGTAAAAAAAAA ]
[-] EMBL AI394980 [ CCGTCGG TCCCCCTGTGTAGTATTTAGTGCATACAACTGGCTTTAGTTTTTTTTACCAATAAAAGCGCAAGGTCGTATCATATTTGAGCTTTTTCTGGCTTTATGACAGTTCCCACATCAATCTCTGTTTAGAGAATGTGGTTAACTTGATGCTTACCT GTTCTAGTTCAAATATGTCGACTAGTCTTTTTACCCCTATTGTATGTGATGTATTTTCTTAAAATTGACTGT CTCCAGTTAAACTTGCTCCTTTGTATATTGTTGAAAATTTTCATTTGTGTAAAGTGATATTCATTTACTTATATGAAAATAAATGTCTTGTAATCTTCCCGAAAAA ]
consensusID : consensus_10597#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 818 fasta sequence
[TNAATTCGGCACCAGGGAAAGCCAATAAATCCACTTCCTACACTTCAGTTCATGTTTTGCGTTTCCTGAGGGTATCGGCGGGTGTTCGAGGAGATGTCACGGATCGTCTTACAAAAGTATCCATCTTTTGTTATAGAAGGCGACACGTATCCTCCACCCGCCTGGCGAGCCCACTTGGCAAAATCCTTACAATTCCTGAAATATTCTATTATTCTTATGACTGTGTTTGGTTTCGACCTCTTTGGATATCTTGGTTACCCTACTCCTAACTTTGTCTCATATGCCATGCAAAATAAAGTTTCTTTCTGTTTGATGACCTTTCTACTTGGAAATGTTATTGAAGGACAGTTGCTATCTACGGGCGCTTTCGAAATATACTTAGATGATATCCCAGTCTGGTCGAAATTGTACACAAATCGTATCCCTCAACCAGAGGAACTTCTTCACATAATTGACAATCACGTAAAACTCCGAGATTCAACAAAGACAATACAATCCGTCGGTCCACCTCTGTAGTATTTAATGCATACAACTGGCTTTAGTTTTTTTTACCAATAAAAGCGCAAGGTCGTATCATATTTGAGCTTTTTCTGGCTTTATGACAGTTCCCACATCAATCTCTGTTTAGAGAATGTGGTTAACTTGATGCTTACCTGTTCTAGTTCAAATATGTCGACTAGTCTTTTTACCCCTATTGTATGTGATGTATTTTCTTAAAATTGACTGTCTCCAGTTAAACTTGCTCCTTTGTATATTGTTGAAAATTCCTATTTGTGTAAAGTGATATTCATTTACTTATATGAAAATAAATGTCTTGT]
[+] EMBL CD081485 [TNAATTCGGCACCAGGGAAAGCCAATAAATCCACTTCCTACACTTCAGTTCATGTTTTGCGTTTCCTGAGGGTATCGGCGGGTGTTCGAGGAGATGTCACGGATCGTCTTACAAAAGTATCCATCTTTTGTTATAGAAGGCGACACGTATCCTCCACCCGCCTGGCGAGCCCACTTGGCAAAATCCTTACAATTCCTGAAATATTCTATTATTCTTATGACTGTGTTTGGTTTCGACCTCTTTGGATATCTTGGTTACCCTACTCCTAACTTTGTCTCATATGCCATGCAAAATAAAGTTTCTTTCTGTTTGATGACCTTTCTACTTGGAAATGTTATTGAAGGACAGTTGCTATCTACGGGCGCTTTCGAAATATACTTAGATGATATCCCAGTCTGGTCGAAATTGTACACAAATCGTATCCCTCAACCAGAGGAACTTCTTCACATAATTGACAATCACGTAAAACTCCGAGATTCAACAAAGACAATACAATCCGTCGGTCCACCTCTGTAGTATTTAATGCATACAACTGGCTTTAGTTTTTTTTACCAATAAAAGCGCAAGGTCGTATCATATTTGAGCTTTTTCTGGCTTTATGACAGTTCCCACATCAATCTCTGTTTAGAGAATGTGGTTAACTTGATGCTTACCTGTTCTAGTTCAAATATGTCGACTAGTCTTTTTACCCCTATTGTATGTGATGTATTTTCTTAAAATTGACTGTCTCCAGTTAAACTTGCTCCTTTGTATATTGTTGAAAATTCCTATTTGTGTAAAGTGATATTCATTTACTTATATGAAAATAAATGTCTTGT]
[+] EMBL CD138337 [ TTGTCTCATATGCCATGCAAAATAAAGTTTCTTTCTGTTTGATGACCTTTCTACTTGGAAATGTTATTGAAGGACAGTTGCTATCTACGGGCGCTTTCGAAATATACTTAGATGATATCCCAGTCTGGTCGAAATTGTACACAAATCGTATCCCTCAACCAGAGGAACTTCTTCACATAATTGACAATCACGTAAAACTCCGAGATTCAACAAAGAC ]
consensusID : consensus_10597#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 689 fasta sequence
[AAATACAGTCAACTTCCAGCAAGTTATGGCCAACATAGGAATGTGGGCTGTGGTTGTTTTCGGTTGCGCCATCTTAACTTGGTTTGATTTTTGGGGATTAAAAGGCAGCAGCAATTCAGAGAAAACCATACCAATTCTAAAAAAGCCAATAAATCCACTTCCTACACTTCAGTTCATGTTTTGCGTTTCCTGAGGGTATCGGCGGGTGTTCGAGGAGATGTCACGGATCGTCTTACAAAAGTATCCATCTTTTGTTATAGAAGGCGACACGTATCCTCCACCCGCCTGGCGAGCCCACTTGGCAAAATCCTTACAATTCCTGAAATATTCTATTATTCTTATGACTGTGTTTGGTTTCGACCTCTTTGGATATCTTGGTTACCCTACTCCTAACTTTGTCTCATATGCCATGCAAAATAAAGTTTCTTTCTGTTTGATGACCTTTCTACTTGGAAATGTTATTGAAGGACAGTTGCTATCTACGGGCGCTTTCGAAATATACTTAGATGATATCCCAGTCTGGTCGAAATTGTACACAAATCGTATCCCTCAACCAGAGGAACTTCTTCACATAATTGACAATCACGTAAAACTCCGAGATTCAACANAGACAATACAATCCGTCGGTCCACCTCTGTAGTATTTAATGCATACAACTGGCTTTAGTTTTTTTTACCAATAAAAGCGCA]
[+] EMBL AI067883 [AAATACAGTCAACTTCCAGCAAGTTATGGCCAACATAGGAATGTGGGCTGTGGTTGTTTTCGGTTGCGCCATCTTAACTTGGTTTGATTTTTGGGGATTAAAAGGCAGCAGCAATTCAGAGAAAACCATACCAATTCTAAAAAAGCCAATAAATCCACTTCCTACACTTCAGTTCATGTTTTGCGTTTCCTGAGGGTATCGGCGGGTGTTCGAGGAGATGTCACGGATCGTCTTACAAAAGTATCCATCTTTTGTTATAGAAGGCGACACGTATCCTCCACCCGCCTGGCGAGCCCACTTGGCAAAATCCTTACAATTCCTGAAATATTCTATTATTCTTATGACTGTGTTTGGTTTCGACCTCTTTGGATATCTTGGTTACCCTACTCCTAACTTTGTCTCATATGCCATGCAAAATAAAGTTTCTTTCTGTTTGATGACCTTTCTACTTGGAAATGTTATTGAAGGACAGTTGCTATCTACGGGCGCTTTCGAAATATACTTAGATGATATCCCAGTCTGGTCGAAATTGTACACAAATCGTATCCCTCAACCAGAGGAACTTCTTCACATAATTGACAATCACGTAAAACTCCGAGATTCAACANAGACAATACAATCCGTCGGTCCACCTCTGTAGTATTTAATGCATACAACTGGCTTTAGTTTTTTTTACCAATAAAAGCGCA]
consensusID : consensus_10597#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 403 fasta sequence
[TTGAATTTGCCCCACATTTTGGTTTTGGCGGCTTTGGAGGTGCCGAAATACAGTCAACTTCCAGCAAGGTTGTTGGTGTAGATTTAACTTGAAATCATTGCTGACCGCATCTCTTTCCATCAATATCATATTCTGGTGGTGAGGAATGTGGGCTGTGGTTGTTTTCGGTTGCGCCATCTTAACTTGGTTTGATTTTTGGGGATTAAAAGGCAGCAGCAATTCAGAGAAAACCATACCAATTCTAAAAAAGCCAATAAATCCACTTCCTACACTTCAGTTCATGTTTTGCGTTTCCTGAGGGTATCGGCGGGTGTTCGAGGAGATGTCACGGATCGTCTTACAAAAGTATCCATCTTTTGTTATAGAAGGCGACACGTATCCTCCACCCGCCTGGCGAGCCCAC]
[+] EMBL CD178647 [TTGAATTTGCCCCACATTTTGGTTTTGGCGGCTTTGGAGGTGCCGAAATACAGTCAACTTCCAGCAAGGTTGTTGGTGTAGATTTAACTTGAAATCATTGCTGACCGCATCTCTTTCCATCAATATCATATTCTGGTGGTGAGGAATGTGGGCTGTGGTTGTTTTCGGTTGCGCCATCTTAACTTGGTTTGATTTTTGGGGATTAAAAGGCAGCAGCAATTCAGAGAAAACCATACCAATTCTAAAAAAGCCAATAAATCCACTTCCTACACTTCAGTTCATGTTTTGCGTTTCCTGAGGGTATCGGCGGGTGTTCGAGGAGATGTCACGGATCGTCTTACAAAAGTATCCATCTTTTGTTATAGAAGGCGACACGTATCCTCCACCCGCCTGGCGAGCCCAC]
consensusID : consensus_10597#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 390 fasta sequence
[GGYAATAATAACRCTGAAATTCCCGTATCACAAATTAAATACTTGAATTCTAGTTAATTTCACTTTTTTTTTGACATGAATCGTTGTTATTCATTTAAAAAAACCTTCAACATGTTGAGACATTGTCATACTAATTCTTAGCATTGAGAAGTGTCAATTATTCACAATGAGTCACYTTTTACATGTATTTGAGGGGCTAAAAGCATTCTATCTAAACACGTAATCAAATCCCTTTCCTCCTACTGAAATTCCGATTATTTTGATTTGATTTTCAGATATCCCAGTCTGGTCGAAATTGTACACAAATCGTATCCCTCAACCAGAGGAACTTCTTCACATAATTGACAATCACGTAAAACTCCGAGATTCAACAAAGACAATACAATCCGT]
[-] EMBL SM1247334 [GGYAATAATAACRCTGAAATTCCCGTATCACAAATTAAATACTTGAATTCTAGTTAATTTCACTTTTTTTTTGACATGAATCGTTGTTATTCATTTAAAAAAACCTTCAACATGTTGAGACATTGTCATACTAATTCTTAGCATTGAGAAGTGTCAATTATTCACAATGAGTCACYTTTTACATGTATTTGAGGGGCTAAAAGCATTCTATCTAAACACGTAATCAAATCCCTTTCCTCCTACTGAAATTCCGATTATTTTGATTTGATTTTCAGATATCCCAGTCTGGTCGAAATTGTACACAAATCGTATCCCTCAACCAGAGGAACTTCTTCACATAATTGACAATCACGTAAAACTCCGAGATTCAACAAAGACAATACAATCCGT]
consensusID : consensus_10597#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 354 fasta sequence
[CCAGATTCTTCACGAGGCGTATCCTCCACCCGCCTGGCGAGCCCACTTGGCAAAATCCTTACAATTCCTGAAATATTCTATTATTCTTATGACTGTGTTTGGTTTCGACCTCTTTGGATATCTTGGTTACCCTACTCCTAACTTTGTCTCATATGCCATGCAAAATAAAGTTTCTTTCTGTTTGATGACCTTTCTACTTGGAAATGTTATTGAAGGACAGTTGCTATCTACGGGCGCTTTCGAAATATACTTAGATGATATCCCAGTCTGGTCGAAATTGTACACAAATCGTATCCCTCAACCAGAGGAACTTCTTCACATAATTGANCATCACGTANAACTCCGAGATTCAAC]
[+] EMBL CD077715 [CCAGATTCTTCACGAGGCGTATCCTCCACCCGCCTGGCGAGCCCACTTGGCAAAATCCTTACAATTCCTGAAATATTCTATTATTCTTATGACTGTGTTTGGTTTCGACCTCTTTGGATATCTTGGTTACCCTACTCCTAACTTTGTCTCATATGCCATGCAAAATAAAGTTTCTTTCTGTTTGATGACCTTTCTACTTGGAAATGTTATTGAAGGACAGTTGCTATCTACGGGCGCTTTCGAAATATACTTAGATGATATCCCAGTCTGGTCGAAATTGTACACAAATCGTATCCCTCAACCAGAGGAACTTCTTCACATAATTGANCATCACGTANAACTCCGAGATTCAAC]
[-] EMBL CD144515 [ AATTCCTGAAATATTCTATTATTCTTATGACTGTGTTTGGTTTCGACCTCTTTGGATATCTTGGTTACCCTACTCCTAACTTTGTCTCATATGCCATGCAAAATAAAGTTTCTTTCTGTTTGATGACCTTTCTACTTGGAAAAGTTATTG ]
consensusID : consensus_10597#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 334 fasta sequence
[ATTGCTTCCAATTGCTTTAGGTTTTTTTTCCCATTAAAGGGGCAGGTTCTTTCAAAATTGGGCCTTTTCTTGCTTTATGGCCGTTTCCACCTCGATTTTTGTTTTGGGAATGTGGTTAACTTGATGCTTACCTGTTCTAGGTCAAATATGGCGACTAGTCTTTTTACCCCTATTGTATGTGATGTATTTTCTTAAAATTGACTGTCTCCAGTTAAACTTGCTCCTTTGTATATTGTTGAAAATTTTCATTTGTGTAAAGTGGTATTCATTTACTTATTTGGAAGTAAATGTCTTGTAATCTTCCCGAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL AI395797 [ATTGCTTCCAATTGCTTTAGGTTTTTTTTCCCATTAAAGGGGCAGGTTCTTTCAAAATTGGGCCTTTTCTTGCTTTATGGCCGTTTCCACCTCGATTTTTGTTTTGGGAATGTGGTTAACTTGATGCTTACCTGTTCTAGGTCAAATATGGCGACTAGTCTTTTTACCCCTATTGTATGTGATGTATTTTCTTAAAATTGACTGTCTCCAGTTAAACTTGCTCCTTTGTATATTGTTGAAAATTTTCATTTGTGTAAAGTGGTATTCATTTACTTATTTGGAAGTAAATGTCTTGTAATCTTCCCGAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10597#0 ------------------------------------------------------------
consensus_10597#3 ------------------------------------------------------------
consensus_10597#2 ------------------------------------------------------------
consensus_10597#5 ------------------------------------------------------------
consensus_10597#1 TNAATTCGGCACCAGGGAAAGCCAATAAATCCACTTCCTACACTTCAGTTCATGTTTTGC 60
consensus_10597#6 ------------------------------------------------------------
consensus_10597#4 ------------------------------------------------------------
consensus_10597#0 ------------------------------------------------------------
consensus_10597#3 ------------------------------------------------------------
consensus_10597#2 ------------------------------------------------------------
consensus_10597#5 ------------------------------------------------------------
consensus_10597#1 GTTTCCTGAGGGTATCGGCGGGTGTTCGAGGAGATGTCACGGATCGTCTTACAAAAGTAT 120
consensus_10597#6 ------------------------------------------------------------
consensus_10597#4 ------------------------------------------------------------
consensus_10597#0 ------------------------------------------------------------
consensus_10597#3 ------------------------------------------------------------
consensus_10597#2 ------------------------------------------------------------
consensus_10597#5 ------------------------------------------------------------
consensus_10597#1 CCATCTTTTGTTATAGAAGGCGACACGTATCCTCCACCCGCCTGGCGAGCCCACTTGGCA 180
consensus_10597#6 ------------------------------------------------------------
consensus_10597#4 ------------------------------------------------------------
consensus_10597#0 ------------------------------------------------------------
consensus_10597#3 ------------------------------------------------------------
consensus_10597#2 ------------------------------------------------------------
consensus_10597#5 ------------------------------------------------------------
consensus_10597#1 AAATCCTTACAATTCCTGAAATATTCTATTATTCTTATGACTGTGTTTGGTTTCGACCTC 240
consensus_10597#6 ------------------------------------------------------------
consensus_10597#4 ------------------------------------------------------------
consensus_10597#0 ------------------------------------------------------------
consensus_10597#3 ------------------------------------------------------------
consensus_10597#2 ----AAATACAGTCAACTTCCAGCAAGTTATGGCCAACATAGGAATGTGGGCTGTGGTTG 56
consensus_10597#5 ------------------------------------------------------------
consensus_10597#1 TTTGGATATCTTGGTTACCCTACTCCTAACTTTGTCTCATATGCCATGCAAAATAAAGTT 300
consensus_10597#6 ------------------------------------------------------------
consensus_10597#4 ------------------------------------------------------------
consensus_10597#0 ------------------------------------------------------------
consensus_10597#3 ------------------------------------------------------------
consensus_10597#2 TTTTCGGTTGCGCCATCTTAACTTGGTTTGATTTTTGGGGATTAAAAGGCAGCAGCAATT 116
consensus_10597#5 ------------------------------------------------------------
consensus_10597#1 TCTTTCTGTTTGATGACCTTTCTACTTGGAAATGTTATTGAAGGACAGTTGCTATCTACG 360
consensus_10597#6 ------------------------------------------------------------
consensus_10597#4 ------------------------------------------------------------
consensus_10597#0 ------------------------------------------------------------
consensus_10597#3 ------------------------------------------------------------
consensus_10597#2 CAGAGAAAACCATACCAATTCTAAAAAAGCCAATAAATCCACTTCCTACACTTCAGTTCA 176
consensus_10597#5 ------------------------------------------------------------
consensus_10597#1 GGCGCTTTCGAAATATACTTAGATGATATCCCAGTCTGGTCGAAATTGTACACAAATCGT 420
consensus_10597#6 ------------------------------------------------------------
consensus_10597#4 ------------------------------------------------------------
consensus_10597#0 --------------------------------------------------------TTTT 4
consensus_10597#3 -----------------------------------------TTGAATTTGCCCCACATTT 19
consensus_10597#2 TGTTTTGCGTTTCCTGAGGGTATCGGCGGGTGTTCGAGGAGATGTCACGGATCGTCTTAC 236
consensus_10597#5 ------------------------------------------------------------
consensus_10597#1 ATCCCTCAACCAGAGGAACTTCTTCACATAATTGACAATCACGTAAAACTCCGAGATTCA 480
consensus_10597#6 ------------------------------------------------------------
consensus_10597#4 ------------------------------------------------------------
consensus_10597#0 TGGCACGAGGGAGCCCTTTGGAGGGTGCCGAAATACAGTCAACTTCCAGCAAGGTTGTTG 64
consensus_10597#3 TGGTTTTGGCGG---CTTTGGAGG-TGCCGAAATACAGTCAACTTCCAGCAAGGTTGTTG 75
consensus_10597#2 AAAAGTATCCATCTTTTGTTATAGAAGGCGACACGTA-TCCTCCACCCGCCTGGC----- 290
consensus_10597#5 --------CCAGATTCTTC--------ACGAGGCGTA-TCCTCCACCCGCCTGGC----- 38
consensus_10597#1 ACAAAGACAATACAATCCGTCGGTCCACCTCTGTAGTATTTAATGCATACAACTGGCTTT 540
consensus_10597#6 -----------------------------------------ATTGCTTCCAATTGCTTTA 19
consensus_10597#4 ------------------------GGYAATAATAACRCTGAAATTCCCGTATCACAAATT 36
*
consensus_10597#0 GTGTAGATTTAACTTGAAATCATTGCTGACCGCATCTCTT-TCCATCAATATCATATTCT 123
consensus_10597#3 GTGTAGATTTAACTTGAAATCATTGCTGACCGCATCTCTT-TCCATCAATATCATATTCT 134
consensus_10597#2 GAGCCCACTTGGC--AAAATCCTTACAATTCCTGAAATAT-TCTATTATTCTTATGACT- 346
consensus_10597#5 GAGCCCACTTGGC--AAAATCCTTACAATTCCTGAAATAT-TCTATTATTCTTATGACT- 94
consensus_10597#1 AGTTTTTTTTACCAATAAAAGCGCAAGGTCGTATCATATT-TGAGCT-TTTTCTGGCTTT 598
consensus_10597#6 GGTTTTTTTTCCCATTAAAGGGGCA-GGTTCTTTCAAAAT-TGGGCC-TTTTCTTGCTTT 76
consensus_10597#4 AAATAC-TTGAATTCTAGTTAATTTCACTTTTTTTTTGACATGAATCGTTGTTATTCATT 95
* * * * *
consensus_10597#0 GGTGGTGAGTTATGGCCAACATAGGAATGTGGGCTGTGGTTGTTTTCGGTTGCGCCA-TC 182
consensus_10597#3 GGTGGTGAG---------------GAATGTGGGCTGTGGTTGTTTTCGGTTGCGCCA-TC 178
consensus_10597#2 -GTGTTTGG---------------TTTCGACCTCTTTGGATATCTT-GGTTACCCTACTC 389
consensus_10597#5 -GTGTTTGG---------------TTTCGACCTCTTTGGATATCTT-GGTTACCCTACTC 137
consensus_10597#1 -ATGACAGT----------------TCCCACATCAATCTCTGTTTA-GAGAATGTGG--- 637
consensus_10597#6 -ATGGCCGT----------------TTCCACCTCGATTTTTGTTTT-GGGAATGTGG--- 115
consensus_10597#4 TAAAAAAACCTTCAACATG---TTGAGACATTGTCATACTAATTCTTAGCATTGAGAAGT 152
* *
consensus_10597#0 TTAACTTGGT-TTGATTTTTGGGGATTAAAAGGCAGCAGCAATTCAGAGAAAACCATACC 241
consensus_10597#3 TTAACTTGGT-TTGATTTTTGGGGATTAAAAGGCAGCAGCAATTCAGAGAAAACCATACC 237
consensus_10597#2 CTAACTTTGT-CTCATATGCCATG--CAAAATAAAGTTTCTTTCTGTTTGATGACCTTTC 446
consensus_10597#5 CTAACTTTGT-CTCATATGCCATG--CAAAATAAAGTTTCTTTCTGTTTGATGACCTTTC 194
consensus_10597#1 TTAACTTGATGCTTACCTGTTCTAGTTCAAATATGTCGACTAGTCTTTTTACCCCTATTG 697
consensus_10597#6 TTAACTTGATGCTTACCTGTTCTAGGTCAAATATGGCGACTAGTCTTTTTACCCCTATTG 175
consensus_10597#4 GTCAATTATTCACAATGAGTCACYTTTTACATGTATTTGAGGGGCTAAAAGCATTCTATC 212
* * ** * * * *
consensus_10597#0 AATTCTAAAAAAGCCAATAAATC-CACTTCCTACACTTCAGTTCA---TGTTTTG-CGTT 296
consensus_10597#3 AATTCTAAAAAAGCCAATAAATC-CACTTCCTACACTTCAGTTCA---TGTTTTG-CGTT 292
consensus_10597#2 TACT-TGGAAATGTTATTGAAGGACAGTTGCTATCTACGGGCGCT---TTCGAAA-TATA 501
consensus_10597#5 TACT-TGGAAATGTTATTGAAGGACAGTTGCTATCTACGGGCGCT---TTCGAAA-TATA 249
consensus_10597#1 TATGTGATGTATTTTCTTAAAATTGACTGTCTCCAGTTAAACTTGC--TCCTTTG-TATA 754
consensus_10597#6 TATGTGATGTATTTTCTTAAAATTGACTGTCTCCAGTTAAACTTGC--TCCTTTG-TATA 232
consensus_10597#4 TA-----AACACGTAATCAAATCCCTTTCCTCCTACTGAAATTCCGATTATTTTGATTTG 267
* * ** * * *
consensus_10597#0 TCCTGAGGGTATCGGCGGGTGTTCGAGGAGATGTCACGGATCGT--CTTACAAAAGTATC 354
consensus_10597#3 TCCTGAGGGTATCGGCGGGTGTTCGAGGAGATGTCACGGATCGT--CTTACAAAAGTATC 350
consensus_10597#2 CTTAGATGATATCCCAGTCTGGTCGAAATTGTA-CACAAATCGTATCCCTCAACCAGAGG 560
consensus_10597#5 CTTAGATGATATCCCAGTCTGGTCGAAATTGTA-CACAAATCGTATCCCTCAACCAGAGG 308
consensus_10597#1 TTGTTGAAA-ATTCCTATTTGTGTAAAGTGATA-TTCATTTACT--TATATGAAAATAAA 810
consensus_10597#6 TTGTTGAAA-ATTTTCATTTGTGTAAAGTGGTA-TTCATTTACT--TATTTGGAAGTAAA 288
consensus_10597#4 ATTTTCAGATATCCCAGTCTGGTCGAAATTGTA-CACAAATCGTATCCCTCAACCAGAGG 326
** ** * * * * * *
consensus_10597#0 CATCTTTTGTTATAGAAGGCGA-CACGTATCCTCCACCCGCCTGGCGAGCCCACTTGGCA 413
consensus_10597#3 CATCTTTTGTTATAGAAGGCGA-CACGTATCCTCCACCCGCCTGGCGAGCCCAC------ 403
consensus_10597#2 AACTTCTTCACATAATTGACAATCACGTAAAACTCCGAGATTCAACANAGACAATACAAT 620
consensus_10597#5 AACTTCTTCACATAATTGANCATCACGTANAACTCCGAGATTCAAC-------------- 354
consensus_10597#1 TGTCTTGT---------------------------------------------------- 818
consensus_10597#6 TGTCTTGTAATCTTCCCGAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------- 334
consensus_10597#4 AACTTCTTCACATAATTGACAATCACGTAAAACTCCGAGATTCAACAAAGACAATACAAT 386
* *
consensus_10597#0 AAATCCTTACAATTCCTGAAATATTCTATTATTCTTATGACTGTGTTTGGTTTCGACCTC 473
consensus_10597#3 ------------------------------------------------------------
consensus_10597#2 CCGTCGGTCCACCTCTGTAGTATTTAATGCATACAACTGGCTTTAGTTTTTTTTACCAAT 680
consensus_10597#5 ------------------------------------------------------------
consensus_10597#1 ------------------------------------------------------------
consensus_10597#6 ------------------------------------------------------------
consensus_10597#4 CCGT-------------------------------------------------------- 390
consensus_10597#0 TTTGGATATCTTGGTTACCCTACTCCTAACTTTGTCTCATATGCCATGCAAAATAAAGTT 533
consensus_10597#3 ------------------------------------------------------------
consensus_10597#2 AAAAGCGCA--------------------------------------------------- 689
consensus_10597#5 ------------------------------------------------------------
consensus_10597#1 ------------------------------------------------------------
consensus_10597#6 ------------------------------------------------------------
consensus_10597#4 ------------------------------------------------------------
consensus_10597#0 TCTTTCTGTTTGATGACCTTTCTACTTGGAAATGTTATTGAAGGACAGTTGCTATCTACG 593
consensus_10597#3 ------------------------------------------------------------
consensus_10597#2 ------------------------------------------------------------
consensus_10597#5 ------------------------------------------------------------
consensus_10597#1 ------------------------------------------------------------
consensus_10597#6 ------------------------------------------------------------
consensus_10597#4 ------------------------------------------------------------
consensus_10597#0 GGCGCTTTCGAAATATACTTAGATGATATCCCAGTCTGGTCGAAATTGTACACAAATCGT 653
consensus_10597#3 ------------------------------------------------------------
consensus_10597#2 ------------------------------------------------------------
consensus_10597#5 ------------------------------------------------------------
consensus_10597#1 ------------------------------------------------------------
consensus_10597#6 ------------------------------------------------------------
consensus_10597#4 ------------------------------------------------------------
consensus_10597#0 ATCCCTCAACCAGAGGAACTTCTTCACATAATTGACAATCACGTAAAACTCCGAGATTCA 713
consensus_10597#3 ------------------------------------------------------------
consensus_10597#2 ------------------------------------------------------------
consensus_10597#5 ------------------------------------------------------------
consensus_10597#1 ------------------------------------------------------------
consensus_10597#6 ------------------------------------------------------------
consensus_10597#4 ------------------------------------------------------------
consensus_10597#0 ACAAAGACAATACAATCCGTCGGTCCACCTCTGTAGTATTTAATGCATACAACTGGCTTT 773
consensus_10597#3 ------------------------------------------------------------
consensus_10597#2 ------------------------------------------------------------
consensus_10597#5 ------------------------------------------------------------
consensus_10597#1 ------------------------------------------------------------
consensus_10597#6 ------------------------------------------------------------
consensus_10597#4 ------------------------------------------------------------
consensus_10597#0 AGTTTTTTTTACCAATAAAAGCGCAAGGTCGTATCATATTTGAGCTTTTTCTGGCTTTAT 833
consensus_10597#3 ------------------------------------------------------------
consensus_10597#2 ------------------------------------------------------------
consensus_10597#5 ------------------------------------------------------------
consensus_10597#1 ------------------------------------------------------------
consensus_10597#6 ------------------------------------------------------------
consensus_10597#4 ------------------------------------------------------------
consensus_10597#0 GACAGTTCCCACATCAATCTCTGTTTAGAGAATGTGGTTAACTTGATGCTTACCTGTTCT 893
consensus_10597#3 ------------------------------------------------------------
consensus_10597#2 ------------------------------------------------------------
consensus_10597#5 ------------------------------------------------------------
consensus_10597#1 ------------------------------------------------------------
consensus_10597#6 ------------------------------------------------------------
consensus_10597#4 ------------------------------------------------------------
consensus_10597#0 AGTTCAAATATGTCGACTAGTCTTTTTACCCCTATTGTATGTGATGTATTTTCTTAAAAT 953
consensus_10597#3 ------------------------------------------------------------
consensus_10597#2 ------------------------------------------------------------
consensus_10597#5 ------------------------------------------------------------
consensus_10597#1 ------------------------------------------------------------
consensus_10597#6 ------------------------------------------------------------
consensus_10597#4 ------------------------------------------------------------
consensus_10597#0 TGACTGTCTCCAGTTAAACTTGCTCCTTTGTATATTGTTGAAAATTTTCATTTGTGTAAA 1013
consensus_10597#3 ------------------------------------------------------------
consensus_10597#2 ------------------------------------------------------------
consensus_10597#5 ------------------------------------------------------------
consensus_10597#1 ------------------------------------------------------------
consensus_10597#6 ------------------------------------------------------------
consensus_10597#4 ------------------------------------------------------------
consensus_10597#0 GTGATATTCATTTACTTATATGAAAATAAATGTCTTGTAATCTTCCCGAAAAAAAAAAAA 1073
consensus_10597#3 ------------------------------------------------------------
consensus_10597#2 ------------------------------------------------------------
consensus_10597#5 ------------------------------------------------------------
consensus_10597#1 ------------------------------------------------------------
consensus_10597#6 ------------------------------------------------------------
consensus_10597#4 ------------------------------------------------------------
consensus_10597#0 AAAAA 1078
consensus_10597#3 -----
consensus_10597#2 -----
consensus_10597#5 -----
consensus_10597#1 -----
consensus_10597#6 -----
consensus_10597#4 -----
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||