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Schistosoma mansoni
cluster # 10599 cluster # 10599       Sequences # 18       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10599#0 length = 1735 sequences # 16  
consensus_10599#1 length = 318 sequences # 1  
consensus_10599#2 length = 262 sequences # 1  

consensusID : consensus_10599#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 1735
fasta sequence
                              [CAAATCTGTGACCTTTGGTTAAGTGGTAGACGAAATTTCTAATTGTTGATTATTCAAACCTCAAAACCAATAGTATTATTTACTGTATATATTGAAAGTTTATTGTATGACAATGACGATGAAGGACGAAGTTGTCGTTCCCCCTGGTCTAAGGGAACTATTACAAGAGTTGACTGTGTCTATACTGCGAGAACACCCTGATAATTTAATTCAGTTTGCTATTGATTTCCTAATGATGAAGAAGGCGGCATCAGAAAATCGTCCAAACAAAACAAATGAAAGTGAAGATGAAGATGAGGAACCTATGCCTATACCTCCACAACGAGCTACTCGAAGAGCTGGTGTAGCTGCGGAAAGTTATGATCCAGAAAAAGATGATACTTCAAATGTAGAGAAAGTTGTGCATCCTAAAACAGAAGAACAACGTCGACGATTAGCTCAAGCCACTAAAGATATTCTACTCTTTCGATGTCTTGATGATGATCAAATGAAAGATGTCATTGATGCCATGTACGAACGACATGTATCGCCTGGTGAAAAAGTAATTACACTTGGTGAAGATGGTGATAATTTTTATGTAATCGAAAGTGGAATTTATGATATCATTGTGAAAGTTGGTAATGAAGAGAAAACTGTTGGAAAATACGACAACAAAGGATCTTTTGGTGAATTGGCACTGATGTACAACACA-CCACGAGCTGCAACCATTTTAGCTAAAACTGAAGGTGTAGTTTGGGTAATGACACGTGAAGTTTTTCGTTCAATTGTATTGAAAAAAGCGTTTGAAAAACGTAGACTATACGAAGAACTGCTTAATCAAGTACCAATCCTAGAAAGTCTTAGTGCTTACGAACGCATGAGTATTGCAGATGCACTAAGAACAAAAATCTTCAAAGATAATCAACAAATTATCAGACAAGGTGATCCAGGTGATGAAATGTTCTTTGTTGAAGAAGGTAAAGTACGCATTAAAATGAAAAGAAGCGGAGAAACAGAAGAAAAAGAAGTGGCTGTTATTGAAAAAGGTGGTTATTTCGGTGAATTAGCATTATTGACAAGTCATCCACGTGCTGCTTCAGCATATGCTGATGGTCAAACTAAACTTGCTGTATTGGATGTTGGAAGTTTTGAACGTTTACTTGGTCCTTGTTTAGACATTCTCAGAAGGAACATTGATGATTATGAAGCAAAACTGAAAAATATTTTTGGTAGTTTAGATAAAGTACCAGAATTAAGACGTTGATTATGAATTTCTTCTGGTGATAAGCATCTTGATCGTCGATTACTATAATAATAATTATCATTGTTATCATAATTACACTGTTCTTTGTGTTCAACATAATGATCCAACTTCTGTGGATATCCATATTCTTTGATTAGTGAAATGGTTAAAAGAATCTGATAGACAAAACGGTACAGATCATAGTGAGTACAGTATATATTTTGTTTTCATTTGCTTATATATATATTTAAAACAAAATGATGTACATATATGTATTTCTCTCTTTTTTTGNTGNTGATTGTTTACCTAAATGATAATATGGGACCTACATGTTTCCATGTAATCCGTTACTCGATTTTTTTTAATTGNNTACACTATTTTATTCCTTTCATTTACGTACTCGNANTTNTAGNTACTNATANNGCATATACTATTATTTATGGTATTATTATGGATATTATGGATGGTACTTGNTCACTCATCATTATCATATCATTCTTATATACTGGNNGG]

[+] EMBL CD194265             [CAAATCTGTGACCTTTGGTTAAGTGGTAGACGAAATTTCTAATTGTTGATTATTCAAACCTCAAAACCAATAGTATTATTTACTGTATATATTGAAAGTTTATTGTATGACAATGACGATGAAGGACGAAGTTGTCGTTCCCCCTGGTCTAAGGGAACTATTACAAGAGTTGACTGTGTCTATACTGCGAGAACACCCTGATAATTTAATTCAGTTTGCTATTGATTTCCTAATGATGAAGAAGGCGGCATCAGAAAATCGTCCAAACAAAACAAATGAAAGTGAAGATGAAGATGAGGAACCTATGCCTATACCTCCACAACGAGCTACTCGAAGAGCTGGTGTAGCTGCGGAAAGTTATGATCCAGAAAAAGATGATACTTCAAATGTAGAGAAAGTTGTGCATCCTANAACAGAAGAACAACGTCGACGATTAGCTCAAGCCACTAAAGATATTCTACTCTTTCGATGTCTTGATGATGATCAAATGAAAGATGTCATTGATGCCATGTACGAACGACATGTATCGCCTGGTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD188438             [                                                                                                                             ACGAAGTTGTCGTTCCCCCTGGTCTAAGGGAACTATTACAAGAGTTGACTGTGTCTATACTGCGAGAACACCCTGATAATTTAATTCAGTTTGCTATTGATTTCCTAATGATGAAGAAGGCGGCATCAGAAAATCGTCCAAACAAAACAAATGAAAGTGAAGATGAAGATGAGGAACCTATGCCTATACCTCCACAACGAGCTACTCGAAGAGCTGGTGTAGCTGCGGAAAGTTATGATCCAGAAAAAGATGATACTTCAAATGTAGAGAAAGTTGTGCATCCTAAAACAGAAGAACAACGTCGACGATTAGCTCAAGCCACTAAAGATATTCTACTCTTTCGATGTCTTGATGATGATCAAATGAAAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD123990             [                                                                                                                             ACGAAGTTGTCGTTCCCCCTGGTCTAAGGGAACTATTACAAGAGTTGACTGTGTCTATACTGCGAGAACACCCTGATAATTTAATTCAGTTTGCTATTGATTTCCTAATGATGAAGAAGGCGGCATCAGAAAATCGTCCAAACAAAACAAATGAAAGTGAAGATGAAGATGAGGAACCTATGCCTATACCTCCACAACGAGCTACTCGAAGAGCTGGTGTAGCTGCGGAAAGTTATGATCCAGAAAAAGATGATACTTCAAATGTAGAGAAAGTTGTGCATCATAAAACAGAAGAACAACGTCGACGATTAGCTCAAGCCACTAAAGATATTCTACTCTTTCGATGTCTTGATGATGATCAAATGAAAGATGTCATTGATGCCATGTACGAACGACATGTATCGCCTGGTGAAAAAGTAATTACACTTGGTGAAGATGGTGATAATTTTTATGTAATCGAAAGTGGAATTTATGATATCATTGTGAAAGTTGGTAATGAAGAGAAAACTGTTGGAAAATACGACAACAAAGGATCTTTTGGTGAATTGGCACTGATGTACAATACACCCACGAGCTGNCACCATTTTAGCTAANACTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD120933             [                                                                                                                              CGAAGTTGTCGTTCCCCCTGGTCTAAGGGAACTATTACAAGAGTTGACTGTGTCTATACTGCGAGAACACCCTGATAATTTAATTCAGTTTGCTATTGATTTCCTAATGATGAAGAAGGCGGCATCAGAAAATCGTCCAAACAAAACAAATGAAAGTGAAGATGAAGATGAGGAACCTATGCCTATACCTCCACAACGAGCTACTCGAAGAGCTGGTGTAGCTGCGGAAAGTTATGATCCAGAAAAAGATGATACTTCAAATGTAGAGAAAGTTGTGCATCCTAAAACAGAAGAACAACGTCGACGATTAGCTCAAGCCACTAAAGATATTCTACTCTTTCGATGTCTTGATGATGATCAAATGAAAGATGTCATTGATGCCATGTACGAACGACATGTATCGCCTGGTGAAAAAGTAATTACACTTGGTGAAGATGGTGATAATTTTTATGTAATCGAAAGTGGAATTTATGATATCATTGTGAAGGTTGGTAATGAAGAGAANACTGTTGGAAAATACGANCACAAAGGATCTTTTGGTGAATTGGCACTGATGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD121740             [                                                                                                                              CGAAGTTGTCGTTCCCCCTGGTCTAAGGGAACTATTACAAGAGTTGACTGTGTCTATACTGCGAGAACACCCTGATAATTTAATTCAGTTTGCTATTGATTTCCTAATGATGAAGAAGGCGGCATCAGAAAATCGTCCAAACAAAACAAATGAAAGTGAAGATGAAGATGAGGAACCTATGCCTATACCTCCACAACGAGCTACTCGAAGAGCTGGTGTAGCTGCGGAAAGTTATGATCCAGAAAAAGATGATACTTCAAATGTAGAGAAAGTTGTGCATCCTAAAACAGAAGAACAACGTCGACGATTAGCTCAAGCCACTAAAGATATTCTACTCTTTCGATGTCTTGATGATGATCAAATGAAAGATGTCATTGATGCCATGTACGAACGACATGTATCGCCTGGTGAAAAAGTAATTACACTTGGTGAAGATGGTGATAATTTTTATGTAATCGAAAGTGGAATTTCTGATATCATTGTGAAAGTTGGTAATGAAGAGAAAACTGTTGGAAAATACGACAACAAAGGATCTTTTGGTGAATTGGCACTGATGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD194480             [                                                                                                                                                                                           cgccAACACCCTGATAATTTAATTCAGATTGCTATTGATTTCCTAATGATGAAGAAGGCGGCATCAGAAAATCGTCCAAACAGAACAAATGAAAGTGAAGATGAAGATGAGGAACCTATGCCTATACCTCCACAACGAGCTACTCGAAGAGCTGGTGTAGCTGCGGAAAGTTATGATCCAGAAAAAGATGATACTTCAAATGTAGAGAAAGTTGTGCATCCTAAAACAGAAGAACAACGTCGACGATTAGCTCAAGCCACTAAAGATATTCTACTCTTTCGATGTCTTGATGATGATCAAATGAAAGATGTCATTGATGCCATGTACGAACGACATGTATCGCCTGGTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD195796             [                                                                                                                                                                                                                                                                                                                                                      TGTAGCTGCGGAAAGTTATGATCCAGAAAAAGATGATACTTCAAATGTAGAGAAAGTTGTGCATCCTAAAACAGAAGAACAACGTCGACGATTAGCTCAAGCCACTAAAGATATTCTACTCTTTCGATGTCTTGATGATGATCAAATGAAAGATGTCATTGATGCCATGTACGAACGACATGTATCGCCTGGTGAAAAAGTAATTACACTTGGTGAAGATGGTGATAATTTTTATGTAATCGAAAGTGGAATTTATGATATCATTGTGAAAGTTGGTAATGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD066168             [                                                                                                                                                                                                                                                                                                                                                                                                                                                ATTAGCTCAAGCCACTAAAGATATTCTACTCTTTCGATGTCTTGATGATGATCAAATGAAAGATGTCATTGATGCCATGTACGAACGACATGTATCGCCTGGTGAAAAAGTAATTACACTTGGTGAAGATGGTGATAGTTTTTATGTAATCGAAAGTGGAATTTATGATATCATTGTGAAAGTTGGTAATGAAGAGAAAACTGTTGGAAAATACGACAACAAAGGATCTTTTGGTGAATTGGCACTGATGTACAACACA CCACGAGCTGCAACCATTTTAGCTAAAACTGAAGGTGTAGTTTGGGTAATGACACGTGAAGTTTTTCGTTCAATTGTATTGAAAAAAGCGTTTGAAAAACGTAGACTATACGAAGAACTGCTTAATCAAGTACCAATCCTAGAAAGTCTTAGTGCTTACGAACGCATGAGTATTGCAGATGCACTAAGAACAAAAATCTTCAAAGATAATCAACAAATTATCAGACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD059214             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TATTCTACTCTTTCGATGTCTTGATGATGATCAAATGAAAGATGTCATTGATGCCATGTACGAACGACATGTATCGCCTGGTGAAAAAGTAATTACACTTGGTGAAGATGGTGATAATTTTTATGTAATCGAAAGTGGAATTTATGATATCATTGTGAAAGTTGGTAATGAAGAGAAAACTGTTGGAAAATACGACAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD128837             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTTGGTGAAGATGGTGATAATTTTTATGTAATCGAAAGTGGAATTTATGATATCATTGTGAAAGTTGGTAATGAAGAGAAAACTGTTGGAAAATACGACAACAAAGGATCTTTTGGTGAATTGGCACTGATGTACAACACA CCACGAGCTGCAACCATTTTAGCTAAAACTGAAGGTGTAGTTTGGGTAATGACACGTGAAGTTTTTCGTTCAATTGTATTGAAAAAAGCGTTTGAAAAACGTAGACTATACGAAGAACTGCTTAATCAAGTACCAATCCTAGAAAGTCTTAGTGCTTACGAACGCATGAGTATTGCAGATGCACTAAGAACAAAAATCTTCAAAGATAATCAACAAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD157083             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGATCTTTTGGTGAATTGGCACTGATGTACAACACA CCACGAGCTGCAACCATTTTAGCTAAAACTGAAGGTGTAGTTTGGGTAATGACACGTGAAGTTTTTCGTTCAATTGTATTGAAAAAAGCGTTTGAAAAACGTAGACTATACGAAGAACTGCTTAATCAAGTACCAATCCTAGAAAGTCTTAGTGCTTACGAACGCATGAGTATTGCAGATGCACTAAGAACAAAAATCTTCAAAGATAATCAACAAATTATCAGACAAGGTGATCCAGGTGATGAAATGTTCTTTGTTGAAGAAGGTAAAGTACGCATTAAAATGAAAAGAAGCGGAGAAACAGAAGAAAAAGAAGTGGCTGTTATTGAAAAAGGTGGTTATTTCGGTGAATTAGCATTATTGACAAGTCATCCACGTGCTGCTTCAGCATATGCTGATGGTCAAACTAAACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD167371             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccGGAACTTTTGGTGAA TGGC C GATGT CAACACA CCACGAGCTGCAACCATTTTAGCTAAAACTGAAGGTGTAGTATGGGTAATGACACGTGAAGTTTTTCGTTCAATTGTATTGAAAAAAGCGTTTGAAAAACGTAGACTATACGAAGAACTGCTTAATCAAGTACCAATCCTAGAAAGTCTTAGTGCTTACGAACGCATGAGTATTGCAGATGCACTAAGAACAAAAATCTTCAAAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD167381             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CACTGATGT CAACACA CCACGAGCTGCAACCA TTTAGCTAAAACTGAAGGTGTAGCTTGGGTAATGACACGTGAAGTTTTTCGTTCAATTGTATTGAAAAAAGCGTTTGAAAAACGTAGACTATACGAAGAACTGCTTAATCAAGTACCAATCCTAGAAAGTCTTAGTGCTTACGAACGCATGAGTATTGCAGATGCACTAAGAACAAAAATCTTCAAAGATAATCAACAAATTATCAGACAAGGTGATCCAGGTGATGAAATGTTCTTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD190804             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTTTGAAAAACGTAGACTATACGAAGAACTGCTTAATCAAGTACCAATCCTAGAAAGTCTTAGTGCTTACGAACGCATGAGTATTGCAGATGCACTAAGAACAAAAATCTTCAAAGATAATCAACAAATTATCAGACAAGGTGATCCAGGTGATGAAATGTTCTTTGTTGAAGAAGGTAAAGTACGCATTAAAATGAAAAGAAGCGGAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD134709             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGACTATACGAAGAACTGCTTAATCAAGTACCAATCCTAGAAAGTCTCAGTGCTTACGAACGCATGAGTATTGCAGATGCACTAAGAACAAAAATCTTCAAAGATAATCAACAAATTATCAGACAAGGTGATCCAGGTGATGAAATGTTCTTTGTTGAAGAAGGTAAAGTACGCATTAAAATGAAAAGAAGCGGAGAAACAGAAGAAAAAGAAGTGGCTGTTATTGAAAAAGGTGGTTATTTCGGTGAATTAGCATTATTGACAAGTCATCCACGTGCTGCTTCAGCATATGCTGATGGTCAAACTAAACTTGCTGTATTGGATGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD079091             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATTAAAATGAAAAGAAGCGGAGAAACAGAAGAAAAAGAAGTGGCTGTTATTGAAAAAGGTGGTTATTTCGGTGAATTAGCATTATTGACAAGTCATCCACGTGCTGCTTCAGCATATGCTGATGGTCAAACTAAACTTGCTGTATTGGATGTTGGAAGTTTTGAACGTTTACTTGGTCCTTGTTTAGACATTCTCAGAAGGAACATTGATGATTATGAAGCAAAACTGAAAAATATTTTTGGTAGTTTAGATAAAGTACCAGAATTAAGACGTTGATTATGAATTTCTTCTGGTGATAAGCATCTTGATCGTCGATTACTATAATAATAATTATCATTGTTATCATAATTACACTGTTCTTTGTGTTCAACATAATGATCCAACTTCTGTGGATATCCATATTCTTTGATTAGTGAAATGGTTAAAAGAATCTGATAGACAAAACGGTACAGATCATAGTGAGTACAGTATATATTTTGTTTTCATTTGCTTATATATATATTTAAAACAAAATGATGTACATATATGTATTTCTCTCTTTTTTTGNTGNTGATTGTTTACCTAAATGATAATATGGGACCTACATGTTTCCATGTAATCCGTTACTCGATTTTTTTTAATTGNNTACACTATTTTATTCCTTTCATTTACGTACTCGNANTTNTAGNTACTNATANNGCATATACTATTATTTATGGTATTATTATGGATATTATGGATGGTACTTGNTCACTCATCATTATCATATCATTCTTATATACTGGNNGG]


>consensus_10599#0 CAAATCTGTGACCTTTGGTTAAGTGGTAGACGAAATTTCTAATTGTTGATTATTCAAACC TCAAAACCAATAGTATTATTTACTGTATATATTGAAAGTTTATTGTATGACAATGACGAT GAAGGACGAAGTTGTCGTTCCCCCTGGTCTAAGGGAACTATTACAAGAGTTGACTGTGTC TATACTGCGAGAACACCCTGATAATTTAATTCAGTTTGCTATTGATTTCCTAATGATGAA GAAGGCGGCATCAGAAAATCGTCCAAACAAAACAAATGAAAGTGAAGATGAAGATGAGGA ACCTATGCCTATACCTCCACAACGAGCTACTCGAAGAGCTGGTGTAGCTGCGGAAAGTTA TGATCCAGAAAAAGATGATACTTCAAATGTAGAGAAAGTTGTGCATCCTAAAACAGAAGA ACAACGTCGACGATTAGCTCAAGCCACTAAAGATATTCTACTCTTTCGATGTCTTGATGA TGATCAAATGAAAGATGTCATTGATGCCATGTACGAACGACATGTATCGCCTGGTGAAAA AGTAATTACACTTGGTGAAGATGGTGATAATTTTTATGTAATCGAAAGTGGAATTTATGA TATCATTGTGAAAGTTGGTAATGAAGAGAAAACTGTTGGAAAATACGACAACAAAGGATC TTTTGGTGAATTGGCACTGATGTACAACACACCACGAGCTGCAACCATTTTAGCTAAAAC TGAAGGTGTAGTTTGGGTAATGACACGTGAAGTTTTTCGTTCAATTGTATTGAAAAAAGC GTTTGAAAAACGTAGACTATACGAAGAACTGCTTAATCAAGTACCAATCCTAGAAAGTCT TAGTGCTTACGAACGCATGAGTATTGCAGATGCACTAAGAACAAAAATCTTCAAAGATAA TCAACAAATTATCAGACAAGGTGATCCAGGTGATGAAATGTTCTTTGTTGAAGAAGGTAA AGTACGCATTAAAATGAAAAGAAGCGGAGAAACAGAAGAAAAAGAAGTGGCTGTTATTGA AAAAGGTGGTTATTTCGGTGAATTAGCATTATTGACAAGTCATCCACGTGCTGCTTCAGC ATATGCTGATGGTCAAACTAAACTTGCTGTATTGGATGTTGGAAGTTTTGAACGTTTACT TGGTCCTTGTTTAGACATTCTCAGAAGGAACATTGATGATTATGAAGCAAAACTGAAAAA TATTTTTGGTAGTTTAGATAAAGTACCAGAATTAAGACGTTGATTATGAATTTCTTCTGG TGATAAGCATCTTGATCGTCGATTACTATAATAATAATTATCATTGTTATCATAATTACA CTGTTCTTTGTGTTCAACATAATGATCCAACTTCTGTGGATATCCATATTCTTTGATTAG TGAAATGGTTAAAAGAATCTGATAGACAAAACGGTACAGATCATAGTGAGTACAGTATAT ATTTTGTTTTCATTTGCTTATATATATATTTAAAACAAAATGATGTACATATATGTATTT CTCTCTTTTTTTGNTGNTGATTGTTTACCTAAATGATAATATGGGACCTACATGTTTCCA TGTAATCCGTTACTCGATTTTTTTTAATTGNNTACACTATTTTATTCCTTTCATTTACGT ACTCGNANTTNTAGNTACTNATANNGCATATACTATTATTTATGGTATTATTATGGATAT TATGGATGGTACTTGNTCACTCATCATTATCATATCATTCTTATATACTGGNNGG



consensusID : consensus_10599#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 318
fasta sequence
                              [GGCTCACGGAACTTTGAGGAACTATGCTATACCTCCACAACGAGCTACTCGAAGAGCTGGTGTAGCTGCGGAAAGTTATGATCCAGAAAAAGATGATACTTCAAATGTAGAGAAAGTTGTGCATCCTAAAACAGAAGAACAACGTCGACGATTAGCTCAAGCCACTAAAGATATTCTACTCTTCCGATGTCTTGATGATGATCAAATGAAAGATGTCATTGATGCCATGTACGAACGACATGTATCGCCTGGTGAAAAAGTAATTACACTTGGTGAAGATGGTGATAATTTTTATGTAATCGAAAGTGGAATTTATGA]

[+] EMBL CD065505             [GGCTCACGGAACTTTGAGGAACTATGCTATACCTCCACAACGAGCTACTCGAAGAGCTGGTGTAGCTGCGGAAAGTTATGATCCAGAAAAAGATGATACTTCAAATGTAGAGAAAGTTGTGCATCCTAAAACAGAAGAACAACGTCGACGATTAGCTCAAGCCACTAAAGATATTCTACTCTTCCGATGTCTTGATGATGATCAAATGAAAGATGTCATTGATGCCATGTACGAACGACATGTATCGCCTGGTGAAAAAGTAATTACACTTGGTGAAGATGGTGATAATTTTTATGTAATCGAAAGTGGAATTTATGA]


>consensus_10599#1 GGCTCACGGAACTTTGAGGAACTATGCTATACCTCCACAACGAGCTACTCGAAGAGCTGG TGTAGCTGCGGAAAGTTATGATCCAGAAAAAGATGATACTTCAAATGTAGAGAAAGTTGT GCATCCTAAAACAGAAGAACAACGTCGACGATTAGCTCAAGCCACTAAAGATATTCTACT CTTCCGATGTCTTGATGATGATCAAATGAAAGATGTCATTGATGCCATGTACGAACGACA TGTATCGCCTGGTGAAAAAGTAATTACACTTGGTGAAGATGGTGATAATTTTTATGTAAT CGAAAGTGGAATTTATGA



consensusID : consensus_10599#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 262
fasta sequence
                              [ATATATATATTTANAACANAATGATGTACATATATGTATTTCTCTCTTTTTTTGTTGTTGATTGTTTACCTAAATGATAATATGGGACCTACATGTTTCCATGTAATCCGTTACTCGATTTTTTTATAATTGTTACAACTATTTTATTCCTTTCATTACGTAACTCGTAATTTTAGTTACTATTAGCATTATTACTATTATTATTGTTATTATTACGATTATTATGGATGTTACTTGTTCACTCATCATTATCATTATCATT]

[-] EMBL CD124270             [ATATATATATTTANAACANAATGATGTACATATATGTATTTCTCTCTTTTTTTGTTGTTGATTGTTTACCTAAATGATAATATGGGACCTACATGTTTCCATGTAATCCGTTACTCGATTTTTTTATAATTGTTACAACTATTTTATTCCTTTCATTACGTAACTCGTAATTTTAGTTACTATTAGCATTATTACTATTATTATTGTTATTATTACGATTATTATGGATGTTACTTGTTCACTCATCATTATCATTATCATT]


>consensus_10599#2 ATATATATATTTANAACANAATGATGTACATATATGTATTTCTCTCTTTTTTTGTTGTTG ATTGTTTACCTAAATGATAATATGGGACCTACATGTTTCCATGTAATCCGTTACTCGATT TTTTTATAATTGTTACAACTATTTTATTCCTTTCATTACGTAACTCGTAATTTTAGTTAC TATTAGCATTATTACTATTATTATTGTTATTATTACGATTATTATGGATGTTACTTGTTC ACTCATCATTATCATTATCATT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10599#0      CAAATCTGTGACCTTTGGTTAAGTGGTAGACGAAATTTCTAATTGTTGATTATTCAAACC 60
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      TCAAAACCAATAGTATTATTTACTGTATATATTGAAAGTTTATTGTATGACAATGACGAT 120
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      GAAGGACGAAGTTGTCGTTCCCCCTGGTCTAAGGGAACTATTACAAGAGTTGACTGTGTC 180
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      TATACTGCGAGAACACCCTGATAATTTAATTCAGTTTGCTATTGATTTCCTAATGATGAA 240
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      GAAGGCGGCATCAGAAAATCGTCCAAACAAAACAAATGAAAGTGAAGATGAAGATGAGGA 300
consensus_10599#1      ----------------------------------------GGCTCACGGAACTTTGAGGA 20
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      ACCTATGCCTATACCTCCACAACGAGCTACTCGAAGAGCTGGTGTAGCTGCGGAAAGTTA 360
consensus_10599#1      AC-TATGC-TATACCTCCACAACGAGCTACTCGAAGAGCTGGTGTAGCTGCGGAAAGTTA 78
consensus_10599#2      ------ATATATATATTTANAACANAATGATGTACATATATGTATTTCTCTCTTTTTTTG 54
                                ****  *  * ***    *  *  *       ** *  **        ** 

consensus_10599#0      TGATCCAGAAAAAGATGATACTTCAAATGTAGAGAAAGTTGTGCATCCTAAAACAGAAGA 420
consensus_10599#1      TGATCCAGAAAAAGATGATACTTCAAATGTAGAGAAAGTTGTGCATCCTAAAACAGAAGA 138
consensus_10599#2      TTGTT----GATTGTT--TACCTAAATGATAATATGGGACCTACATGTTTCCATGTAATC 108
                       *  *      *  * *  *** * **   **      *   * ***  *   *   **  

consensus_10599#0      ACAACGTCGACGATTAGCTCAAGCCACTAAAGATATTCTACTCTTTCGATGTCTTGA-TG 479
consensus_10599#1      ACAACGTCGACGATTAGCTCAAGCCACTAAAGATATTCTACTCTTCCGATGTCTTGA-TG 197
consensus_10599#2      CGTTACTCGAT--TTTTTTATAATTGTTACAACTATTTTATTCCTTTCATTACGTAACTC 166
                             ****   **   *  *     ** *  **** ** ** *   **  * * * * 

consensus_10599#0      ATGATCA-AATGAAAGATGTCATTGATGCCATGTACGAACGACAT-GTATCGCCTGGTGA 537
consensus_10599#1      ATGATCA-AATGAAAGATGTCATTGATGCCATGTACGAACGACAT-GTATCGCCTGGTGA 255
consensus_10599#2      GTAATTTTAGTTACTATTAGCATTATTACTAT-TATTATTGTTATTATTACGATTATTAT 225
                        * **   * * *    *  ****  * * ** **  *  *  **  *  **  *  *  

consensus_10599#0      AAAAGTAATTACACTTGGTGAAGATGGTGATAATTTTTATGTAATCGAAAGTGGAATTTA 597
consensus_10599#1      AAAAGTAATTACACTTGGTGAAGATGGTGATAATTTTTATGTAATCGAAAGTGGAATTTA 315
consensus_10599#2      GGATGTTACT-TGTTCACTCATCATTATCATTATCATT---------------------- 262
                         * ** * *    *   * *  **  * ** **  **                      

consensus_10599#0      TGATATCATTGTGAAAGTTGGTAATGAAGAGAAAACTGTTGGAAAATACGACAACAAAGG 657
consensus_10599#1      TGA--------------------------------------------------------- 318
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      ATCTTTTGGTGAATTGGCACTGATGTACAACACACCACGAGCTGCAACCATTTTAGCTAA 717
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      AACTGAAGGTGTAGTTTGGGTAATGACACGTGAAGTTTTTCGTTCAATTGTATTGAAAAA 777
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      AGCGTTTGAAAAACGTAGACTATACGAAGAACTGCTTAATCAAGTACCAATCCTAGAAAG 837
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      TCTTAGTGCTTACGAACGCATGAGTATTGCAGATGCACTAAGAACAAAAATCTTCAAAGA 897
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      TAATCAACAAATTATCAGACAAGGTGATCCAGGTGATGAAATGTTCTTTGTTGAAGAAGG 957
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      TAAAGTACGCATTAAAATGAAAAGAAGCGGAGAAACAGAAGAAAAAGAAGTGGCTGTTAT 1017
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      TGAAAAAGGTGGTTATTTCGGTGAATTAGCATTATTGACAAGTCATCCACGTGCTGCTTC 1077
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      AGCATATGCTGATGGTCAAACTAAACTTGCTGTATTGGATGTTGGAAGTTTTGAACGTTT 1137
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      ACTTGGTCCTTGTTTAGACATTCTCAGAAGGAACATTGATGATTATGAAGCAAAACTGAA 1197
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      AAATATTTTTGGTAGTTTAGATAAAGTACCAGAATTAAGACGTTGATTATGAATTTCTTC 1257
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      TGGTGATAAGCATCTTGATCGTCGATTACTATAATAATAATTATCATTGTTATCATAATT 1317
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      ACACTGTTCTTTGTGTTCAACATAATGATCCAACTTCTGTGGATATCCATATTCTTTGAT 1377
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      TAGTGAAATGGTTAAAAGAATCTGATAGACAAAACGGTACAGATCATAGTGAGTACAGTA 1437
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      TATATTTTGTTTTCATTTGCTTATATATATATTTAAAACAAAATGATGTACATATATGTA 1497
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      TTTCTCTCTTTTTTTGNTGNTGATTGTTTACCTAAATGATAATATGGGACCTACATGTTT 1557
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      CCATGTAATCCGTTACTCGATTTTTTTTAATTGNNTACACTATTTTATTCCTTTCATTTA 1617
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      CGTACTCGNANTTNTAGNTACTNATANNGCATATACTATTATTTATGGTATTATTATGGA 1677
consensus_10599#1      ------------------------------------------------------------
consensus_10599#2      ------------------------------------------------------------
                                                                                   

consensus_10599#0      TATTATGGATGGTACTTGNTCACTCATCATTATCATATCATTCTTATATACTGGNNGG 1735
consensus_10599#1      ----------------------------------------------------------
consensus_10599#2      ----------------------------------------------------------
                                                                                 




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)