cluster # 10604

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Schistosoma mansoni
cluster # 10604 cluster # 10604 Sequences # 18 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10604#0 length = 997 sequences # 10
consensus_10604#1 length = 788 sequences # 5

consensus_10604#2 length = 448 sequences # 2
consensus_10604#3 length = 168 sequences # 1

consensusID : consensus_10604#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 997
fasta sequence

                              [CCTCCGAGCCAANAATTCGGCACGAGGACAAACTGAAGAGGCTTTGATTAGTTTGTACGGATTTGAACCCGATTTTACATCTGCATGGGATCATCTACAGTCTCAAAGTGAATGTTGTGGATTTTCGGGTCCTCAAATATAT-GCCTCTTCAAAATGGAAATACAGTCAACCTAATTCCTCAACTTTTATCAGCTTAGTACCTGATTCTTGTCTTACACTTAAAAGCTTAGAAGAACAAGTACTTGAAGATATAAAAACTAAGTCTGATTATGAAGAACCTAGACAAGTGACTTTTCAAAAAGGATGCGCAGAATTTCTTTATACTCACATAGAAGGTGTTCTAAGCGGTTCGTTCATCGTACCGGTTATTTCTCTTGTGATTGTATCTTTTTCATTTATCCTTGGAATCATTTTGTGTAATTTCGTGGTAGTTGGAGAAGAAATATAAAACAATGAGAAAGATATTTAACATCAACCCAATTATAATCAGGCTGTTTTAATCTGGTCTGAAGAGAATCTCCAGTTTTTTTTTCTTTTTTTAAAGACCAAACTATAATTTCGCATTTGTTTTCGCTTTTTTTCTTTACTTAATTTATTTTTTTAGAGAAAATTGTCTATTTGCTACTATTAATAATATAGTATTACTGCTATTACCGTCACGATTTTTTTTCTGTTTAGAAAGTTTATTTTTCAATCAGTTATTCATTTATTTTTCACCATTGATTTTCTCGTTGATTTGAATTGCGAGAAAAGGTATCTGATCAAGTATAATTTTATCATTGTTATTTAGTGCTTAGTCCGCCTTATTACTTTTATTACTCTACATATTCTGTCTGTATATTCACTGATTTATACATACATGAAGTGTATTAGCTTTTTACGATGAATAAATCAATTCATGATGATGATTATGGTAAACTGATTTCATATTATTGTTTTTTTCCCAACGATAAATCTACTTAGTGTACATTATTTTATGCAGTTATTTTAGTGTATA]

[+] EMBL CD082684             [CCTCCGAGCCAANAATTCGGCACGAGGACAAACTGAAGAGGCTTTGATTAGTTTGTACGGATTTGAACCCGATTTTACATCTGCATGGGATCATCTACAGTCTCAAAGTGAATGTTGTGGATTTTCGGGTCCTCAAATATAT GCCTCTTCAAAATGGAAATACAGTCAACCTAATTCCTCAACTTTTATCAGCTTAGTACCTGATTCTTGTCTTACACTTAAAAGCTTAGAAGAACAAGTACTTGAAGATATAAAAACTAAGTCTGATTATGAAGAACCTAGACAAGTGACTTTTCAAAAAGGATGCGCAGAATTTCTTTATACTCACATAGAAGGTGTTCTAAGCGGTTCGTTCATCGTACCGGTTATTTCTCTTGTGATTGTATCTTTTTCATTTATCCTTGGAATCATTTTGTGTAATTTCGTGGTAGTTGGAGAAGAAATATAAAACAATGAGAAAGATATTTAACATCAACCCAATTATAATCAGGCTGTTTTAATCTGGTCTGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD140704             [                                                 AGTTTGTACGGATTTGAACCCGATTTTACATCTGCATGGGATCATCTACAGTCTCAAAGTGAATGTTGTGGATTTTCGGGTCCTCAAATATAT GCCTCTTCAAAATGGAAATACAGTCAACCTAATTCCTCAACTTTTATCAGCTTAGTACCTGATTCTTGTCTTACACTTAAAAGCTTAGAAGAACAAGTACTTGAAGATATAAAAACTAAGTCTGATTATGAAGAACCTAGACAAGTGACTTTTCAAAAAGGATGCGCAGAATTTCTTTATACTCACATAGAAGGTGTTCTAAGCGGTTCGTTCATCGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD140491             [                                                  GTTTGTACGGATTTGAACCCGATTTTACATCTGCATGGGATCATCTACAGTCTCAAAGTGAATGTTGTGGATTTTCGGGTCCTCAAATATAT GCCTCTTCAAAATGGAAATACAGTCAACCTAATTCCTCAACTTTTATCAGCTTAGTACCTGATTCTTGTCTTACACTTAAAAGCTTAGAAGAACAAGTACTTGAAGATATAAAAACTAAGTCTGATTATGAAGAACCTAGACAAGTGACTTTTCAAAAAGGATGCGCAGAATTTCTTTATACTCACATAGAAGGTGTTCTAAGCGGTTCGTTCATCGTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD083035             [                                                                                                                        ATTTTCGGGTCCTCAAATATATCGCCTCTTCAAAATGGAAATACAGTCAACCTAATTCCTCAACTTTTATCAGCTTAGTACCTGATTCTTGTCTTACACTTAAAAGCTTAGAAGAACAAGTACTTGAAGATATAAAAACTAAGTCTGATTATGAAGAACCTAGACAAGTGACTTTTCAAAAAGGATGCGCAGAATTTCTTTATACTCACATAGAAGGTGTTCTAAGCGGTTCGTTCATCGTACCGGTTATTTCTCTTGTGATTGTATCTTTTTCATTTATCCTTGGAATCATTTTGTGTAATTTCGTGGTAGTTGGAGAAGAAATATAAAACAATGAGAAAGATATTTAACATCAACCCAATTATAATCAGGCTGTTTTAATCTGGTCTGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD073373             [                                                                                                                                                                                                                                                                                                                                                                                         GTGATTGTATCTTTTTCATTTATCCTTGGAATCATTTTGTGTAATTTCGTGGTAGTTGGAGAAGAAATATAAAACAATGAGAAAGATATTTAACATCAACCCAATTATAATCAGGCTGTTTTAATCTGGTTTGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL AI067135             [                                                                                                                                                                                                                                                                                                                                                                                                                                       TCGTGGTAGCTGGAGAAGAAATATAAAACAATGAGAAAGATATTTAACATCAACCCAATTATAATCAGGCTGTTTTAATCTGGTCTGAAGAGAATCTCCAGTTTTTTTTTCTTTTTTTAAAGACCAAACTATAATTTCGCATTTGTTATCGCTTTTTTTCTTTACTTAATTTATTTTTTTAGAGAAAATTGTCTATCTGCTACTATTAATAATATAGTATTACTGCTATTACCGTCACGATTTTTTTTCTGTTTAGAAAGTTTATTTTTCAATCAGTTATTCATTTATTTTTCACCATTGATTTTCTCGTTGATGTGAATTGCGAGAAAAGGTATCTGATCAAGTATAATTTTATCATTGTTATTTAGTGCTTAGTCCGCCTTATTACTTTTATTACTCTACATATTCTGTCTGTATATTCACTGATTTATACATACATGAAGTGTATTAGCTTTTTACGATGAATAAATCAATTCATGATGATGATTAT                                                                                     ]
[+] EMBL CD083036             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACTATAATTTCGCATTTGTTTTCGCTTTTTTTCTTTACTTAATTTATTTTTTTAGAGAAAATTGTCTATTTGCTACTATTAATAATATAGTATTACTGCTATTACCGTCACGATTTTTTTTCTGTTTAGAAAGTTTATTTTTCAATCAGTTATTCATTTATTTTT                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD082685             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACTATAATTTCGCATTTGTTTTCGCTTTTTTTCTTTACTTAATTTATTTTTTTAGAGAAAATTGTCTATTTGCTACTATTAATAATATAGTATTACTGCTATTACCGTCACGATTTT                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD073372             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTATAATTTCGCATTTGTTTTCGCTTTTTTTCTTTACTTAATTTATTTTTTTAGAGAAAATTGTCTATTTGCTACTATTAATAATATAGTATTACTGCTATTACCGTCACGATTTTTTTTCTGTTTAGAAAGTTTATTTTTCAATCAGTTATTCATTTATTTTTCACCATTGATTTTCTCGTTGATTTGAATTGCGAGAAAAGGTATCTGATCAAGTATAATTTTATCATTGTTATTTAGTGCTTAGTCCGCCTTATTACTTTTATTACTCTACATATTCTGTCTGTATATTCACTGATTTATACATACATGAAGTGTATTAGCTTTTTACGATGAATAAATCAATTC                                                                                                   ]
[-] EMBL CD076277             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTATAATTTCGCATTTGTTTTCGCTTTTTTTCTTTACTTAATTTATTTTTTTAGAGAAAATTGTCTATTTGCTACTATTAATAATATAGTATTACTGCTATTACCGTCACGATTTTTTTTCTGTTTAGAAAGTTTATTTTTCAATCAGTTATTCATTTATTTTTCACCATTGATTTTCTCGTTGATTTGAATTGCGAGAAAAGGTTTCTGATCAAGTATAATTTTATCATTGTTATTTAGTGCTTAGTCCGCCTTATTACTTTTATTACTCTACATATTCTGTCTGTATATTCACTGATTTATACATACATGAAGTGTATTAGCTTTTTACGATGAATAAATCAATTCATGATGATGATTATGGTAAACTGATTTCATATTATTGTTTTTTTCCCAACGATAAATCTACTTAGTGTACATTATTTTATGCAGTTATTTTAGTGTATA]




>consensus_10604#0
CCTCCGAGCCAANAATTCGGCACGAGGACAAACTGAAGAGGCTTTGATTAGTTTGTACGG
ATTTGAACCCGATTTTACATCTGCATGGGATCATCTACAGTCTCAAAGTGAATGTTGTGG
ATTTTCGGGTCCTCAAATATATGCCTCTTCAAAATGGAAATACAGTCAACCTAATTCCTC
AACTTTTATCAGCTTAGTACCTGATTCTTGTCTTACACTTAAAAGCTTAGAAGAACAAGT
ACTTGAAGATATAAAAACTAAGTCTGATTATGAAGAACCTAGACAAGTGACTTTTCAAAA
AGGATGCGCAGAATTTCTTTATACTCACATAGAAGGTGTTCTAAGCGGTTCGTTCATCGT
ACCGGTTATTTCTCTTGTGATTGTATCTTTTTCATTTATCCTTGGAATCATTTTGTGTAA
TTTCGTGGTAGTTGGAGAAGAAATATAAAACAATGAGAAAGATATTTAACATCAACCCAA
TTATAATCAGGCTGTTTTAATCTGGTCTGAAGAGAATCTCCAGTTTTTTTTTCTTTTTTT
AAAGACCAAACTATAATTTCGCATTTGTTTTCGCTTTTTTTCTTTACTTAATTTATTTTT
TTAGAGAAAATTGTCTATTTGCTACTATTAATAATATAGTATTACTGCTATTACCGTCAC
GATTTTTTTTCTGTTTAGAAAGTTTATTTTTCAATCAGTTATTCATTTATTTTTCACCAT
TGATTTTCTCGTTGATTTGAATTGCGAGAAAAGGTATCTGATCAAGTATAATTTTATCAT
TGTTATTTAGTGCTTAGTCCGCCTTATTACTTTTATTACTCTACATATTCTGTCTGTATA
TTCACTGATTTATACATACATGAAGTGTATTAGCTTTTTACGATGAATAAATCAATTCAT
GATGATGATTATGGTAAACTGATTTCATATTATTGTTTTTTTCCCAACGATAAATCTACT
TAGTGTACATTATTTTATGCAGTTATTTTAGTGTATA

consensusID : consensus_10604#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 788
fasta sequence

                              [TGGACTGCCAAATTGAATGCAGATGACATCGCAAAAAGGTATGCTAGAAAGACGCGGATATCGCTCGCTTCATATTAGTCGTTTACAATTGAAACGATGGTCATCTTATCTTGCCACTGCGTTTGCGATTCTCTCATTTGCTTTTATTTCTGGTGGAATTTGGCTACTTGAAAATAATCGGATCGAATCCGAAATTATCGGCAGGCGATATTACTACGAAGAAGGAGTTTTGTTTGTAATCATTGGGATACTATTGCTTCTTTCGCTTGTTTGTCAAGCTTTTATGATTCATCTATTGTTTGTTTCAAAAAAACCATGGAGATTTACTGAAGTCAAGGTAAAGAGAGCAGTTGCACTGTATTTAGTTTTTCTGTTTGCAGTGACAATCCCTCATATTTATTGTTTGTACCATGTGAAAACAATTAGAACAAAATTAATATGGTCAATTAAAGAACAAACTGAAGAGGCTTTGATTAGTTTGTACGGATTTGAACCCGATTTTACATCTGCATGGGATCATCTACAGTCTCAAAGTGAATGTTGTGGATTTTCGGGTCCTCAAATATATGCCTCTTCAAAATGGAAATACAGTCAACCTAATTCCTCAACTTTTATCAGCTTAGTACCTGATTCTTGTCTTACACTTAAAAGCTTAGAAGAACAAGTACTTGAAGATATAAAAACTAAGTCTGATTATGAAGAACCTAGACAAGTGACTTTTCAAAAAGGATGCGCAGAATTTCTTTATACTCACATAGAAGGTGTTCTAAGCGGTTCGTTCATCGTAC]

[+] EMBL CD078916             [TGGACTGCCAAATTGAATGTAGATGACATCGCAAAAAGGTATGCTAGAAAGACGCGGATATCGCTCGCTTCATATTAGTCGTTTACAATTGAAACGATGGTCATCTTATCTTGCCACTGCGTTTGCGATTCTCTCATTTGCTTTTATTTCTGGTGGAATTTGGCTACTTGAAAATAATCGGATCGAATCCGAAATTATCGGCAGGCGATATTACTACGAAGAAGGAGTTTTGTTTGTAATCATTGGGATACTATTGCTTCTTTCGCTTGTTTGTCAAGCTTTTATGATTCATCTATTGTTTGTTTCAAAAAAACCATGGAGATTTACTGAAGTCAAGGTAAAGAGAGCAGTTGCACTGTATTTAGTTTTTCTGTTTGCAGTGACAATCCCTCATATTTATTGTTTGTACCATGTGAAAACAATTAGAACAAAATTAATATGGTCAATTAAAGAACAAACTGAAGAGGCTTTGATTAGTTTGTACGGATTTGAACCCGATTTTACATCTGCATGGGATCATCTACAGTCTCANAGTGAATGTTGTGGATTTTCGGGTCCT AAATATATGCC                                                                                                                                                                                                                         ]
[+] EMBL BF936770             [        CAAATTGAATGCAGATGACATCGCAAAAAGGTATGCTAGAAAGACGCGGATATCGCTCGCTTCATATTAGTCGTTTACAATTGAAACGATGGTCATCTTATCTTGCCACTGCGTTTGCGATTCTCTCATTTGCTTTTATTTCTGGTGGAATTTGGCTACTTGAAAATAATCGGATCGAATCCGAAATTATCGGCAGGCGATATTACTACGAAGAAGGAGTTTTGTTTGTAATCATTGGGATACTATTGCTTCTTTCGCTTGTTTGTCAAGCTTTTATGATTCATCTATTGTTTGTTTCAAAAAAACCATGGAGATTTACTGAAGTCAAGGTAAAGAGAGCAGTTGCACTGTATTTAGTTTTTCTGTTTGCAGTGACAATCCCTCATATTTATTGTTTGTACCATGTGAAAACAATTAGAACAAAATTAATATGGTCAATTAAAGAACAAACTGAAGAGGCTTTGATTAGTTTGTACGGATTTGAACCCGATTTTACATCTGCATGGGATCATCTACAGTCTCAAAGTGAATGTTGTGGATTTTCGGGTCCTCAAATATATGCCTCTTCAAAATGGAAATACAGTCAACCTAATTCCTCAACTTTTATCAGCTTAGTACCTGATTCTTGTCTTACACTTAAAAGCTTAGAAGAACAAGTACTTGAAGATATAAAAACTAAGTCTGATTATGAAGAACCTAGACAAGTGACTTTTCAAAAAGGATGCGCAGAATTTCTTTATACTCACATAGAA                            ]
[+] EMBL BF936370             [        CAAATTGAATGCAGATGACATCGCAAAAAGGTATGCTAGAAAGACGCGGATATCGCTCGCTTCATATTAGTCGTTTACAATTGAAACGATGGTCATCTTATCTTGCCACTGCGTTTGCGATTCTCTCATTTGCTTTTATTTCTGGTGGAATTTGGCTACTTGAAAATAATCGGATCGAATCCGAAATTATCGGCAGGCGATATTACTACGAAGAAGGAGTTTTGTTTGTAATCATTGGGATACTATTGCTTCTTTCGCTTGTTTGTCAAGCTTTTATGATTCATCTATTGTTTGTTTCAAAAAAACCATGGAGATTTACTGAAGTCAAGGTAAAGAGAGCAGTTGCACTGTATTTAGTTTTTCTGTTTGCAGTGACAATCCCTCATATTTATTGTTTGTACCATGTGAAAACAATTAGAACAAAATTAATATGGTCAATTAAAGAACAAACTGAAGAGGCTTTGATTAGTTTGTACGGATTTGAACCCGATTTTACATCTGCATGGGATCATCTACAGTCTCAAAGTGAATGTTGTGGATTTTCGGGTCCTCA                                                                                                                                                                                                                                   ]
[-] EMBL CD140552             [                                                                                                                                                                                                                                                                                                                                                                                                                    TGTACCATGTGAAAACAATTAGAACAAAATTAATATGGTCAATTCAAGAACAAACTGAAGAGGCTTTGATTAGTTTGTACGGATTTGAACCCGATTTTACATCTGCATGGGATAATCTACAGTCTCAAAGTGAATGTTGTGGATTTTCGGGTCCTCAAATATATGCCTCTTCAAAATGGAAATACAGTCAACCTAATTCCTCAACTTTTATCAGCTTAGTACCTGATTCTTGTCTTACACTTAAAAGCTTAGAAGAACAAGTACTTGAAGATATAAAAACTAAGTCTGATTATGAAGAACCTAGACAAGTGACTTTTCAAAAAGGATGCGCAGAAATTCTTTATACTCACATAGAAGGTGTTCTAAGCGGTTCGTTCATCGTAC]
[-] EMBL CD167640             [                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATATGGTCAATTAAAGAACAAACTGAAGAGGCTTTGATTAGTTTGTACGGATTTGAACCCGATTTTACATCTGCATGGGATCATCTACAGTCTCAAAGTGAATGTTGTGGATTTTCGGGTCCTCAAATATATGCCTCTTCAAAATGGAAATACAGTCAACCTAATTCCTCAACTTTTATCAGCTTAGTACCTGATTCTTGTCTTACACTTAAAAGCTTAGAAGAACAAGTACTTGAAGATATAAAAACTAAGTCTGATTATGAAGAACCTAGACAAGTGACc                                                                      ]




>consensus_10604#1
TGGACTGCCAAATTGAATGCAGATGACATCGCAAAAAGGTATGCTAGAAAGACGCGGATA
TCGCTCGCTTCATATTAGTCGTTTACAATTGAAACGATGGTCATCTTATCTTGCCACTGC
GTTTGCGATTCTCTCATTTGCTTTTATTTCTGGTGGAATTTGGCTACTTGAAAATAATCG
GATCGAATCCGAAATTATCGGCAGGCGATATTACTACGAAGAAGGAGTTTTGTTTGTAAT
CATTGGGATACTATTGCTTCTTTCGCTTGTTTGTCAAGCTTTTATGATTCATCTATTGTT
TGTTTCAAAAAAACCATGGAGATTTACTGAAGTCAAGGTAAAGAGAGCAGTTGCACTGTA
TTTAGTTTTTCTGTTTGCAGTGACAATCCCTCATATTTATTGTTTGTACCATGTGAAAAC
AATTAGAACAAAATTAATATGGTCAATTAAAGAACAAACTGAAGAGGCTTTGATTAGTTT
GTACGGATTTGAACCCGATTTTACATCTGCATGGGATCATCTACAGTCTCAAAGTGAATG
TTGTGGATTTTCGGGTCCTCAAATATATGCCTCTTCAAAATGGAAATACAGTCAACCTAA
TTCCTCAACTTTTATCAGCTTAGTACCTGATTCTTGTCTTACACTTAAAAGCTTAGAAGA
ACAAGTACTTGAAGATATAAAAACTAAGTCTGATTATGAAGAACCTAGACAAGTGACTTT
TCAAAAAGGATGCGCAGAATTTCTTTATACTCACATAGAAGGTGTTCTAAGCGGTTCGTT
CATCGTAC

consensusID : consensus_10604#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 448
fasta sequence

                              [AGTATATATTTCAATAAAATACTTAGATATAAGTTACAACNNCCGACNNCAACANTGTTNCGTNATATTATATATATAAATCCATAATTCATATATATAGAGATAAATCNTGTTTTAATTACATATAAATAACTG-ACTGTTTAAAGTGACAATAATTTGAATAGTATTCACATTCACACACTCACTCACTCACACACGCACGCACGCACATATGGAAACCGAAAAAAATAGTAACAACTATTTTTTATGAATAGAGGGGGGTAACTGGCGTAGGTAATTAATTAAGTAAGTAATATAAATATATATATGTATTAAAAATGAATTGCGAGAAAAGGTATCTGATCAAGTATAATTTTATCATTGTTATTTAGTGCTTAGTCCGCCTTATTACTTTTATTACTCTACATATTCTGTCTGTATATTCGCTGATTTATACATACATGAAGTG]

[-] EMBL CD077843             [AGTATATATTTCAATAAAATACTTAGATATAAGTTACAACNNCCGACNNCAACANTGTTNCGTNATATTATATATATAAATCCATAATTCATATATATAGAGATAAATCNTGTTTTAATTACATATAAATAACTG ACTGTTTAAAGTGACAATAATTTGAATAGTATTCACATTCACACACTCACTCACTCACACACGCACGCACGCACATATGGAAACCGAAAAAAATAGTAACAACTATTTTTTATGAATAGAGGGGGGTAACTGGCGTAGGTAATTAATTAAGTAAGTAATATAAATATATATATGTATTAAAAATGAATTGCGAGAAAAGGTATCTGATCAAGTATAATTTTATCATTGTTATTTAGTGCTTAGTCCGCCTTATTACTTTTATTACTCTACATATTCTGTCTGTATATTCGCTGATTTATACATACATGAAGTG]
[-] EMBL AI964701             [                                                                                                        AAATCTTGTTTTAATTACATATAAATAACTGAACTG TTAAAGTGACAATAATTTGAATAGTATTCACATTCACA    CACTCACTCACACACGCACGCACGCACATATGGAAACCGAAAAAAATAGTAACAACTATTTTTTATGAATAGAGGGGGGTAACTGGCGTAGGTAATTAATTAAGTAAGTAATATATATATGTATATGTATTAAAAAT                                                                                                                                 ]




>consensus_10604#2
AGTATATATTTCAATAAAATACTTAGATATAAGTTACAACNNCCGACNNCAACANTGTTN
CGTNATATTATATATATAAATCCATAATTCATATATATAGAGATAAATCNTGTTTTAATT
ACATATAAATAACTGACTGTTTAAAGTGACAATAATTTGAATAGTATTCACATTCACACA
CTCACTCACTCACACACGCACGCACGCACATATGGAAACCGAAAAAAATAGTAACAACTA
TTTTTTATGAATAGAGGGGGGTAACTGGCGTAGGTAATTAATTAAGTAAGTAATATAAAT
ATATATATGTATTAAAAATGAATTGCGAGAAAAGGTATCTGATCAAGTATAATTTTATCA
TTGTTATTTAGTGCTTAGTCCGCCTTATTACTTTTATTACTCTACATATTCTGTCTGTAT
ATTCGCTGATTTATACATACATGAAGTG

consensusID : consensus_10604#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 168
fasta sequence

                              [CGGCACGAGGAATTAATATGGTCAATTAAAGAACAAACTGAAGAGGCTTTGATTAGTTTGTACGGATTTGAACCCGATTTTACATCTGCATGGGATCATCTACAGTCTCAAAGTGAATGTTGTGGATTTTCGGGTCCTCAAATATATGCCTCTTCAAAATGGAAATAC]

[+] EMBL CD078201             [CGGCACGAGGAATTAATATGGTCAATTAAAGAACAAACTGAAGAGGCTTTGATTAGTTTGTACGGATTTGAACCCGATTTTACATCTGCATGGGATCATCTACAGTCTCAAAGTGAATGTTGTGGATTTTCGGGTCCTCAAATATATGCCTCTTCAAAATGGAAATAC]




>consensus_10604#3
CGGCACGAGGAATTAATATGGTCAATTAAAGAACAAACTGAAGAGGCTTTGATTAGTTTG
TACGGATTTGAACCCGATTTTACATCTGCATGGGATCATCTACAGTCTCAAAGTGAATGT
TGTGGATTTTCGGGTCCTCAAATATATGCCTCTTCAAAATGGAAATAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10604#1      ------------------------------------------------------------
consensus_10604#3      ------------------------------------------------------------
consensus_10604#0      CCTCCGAGCCAANAATTCGGCACGAGGACAAACTGAAGAGGCTTTGATTAGTTTGTACGG 60
consensus_10604#2      ------------------------------------------------------------
                                                                                   

consensus_10604#1      --TGGACTGCCAAATTGAATGCAGATGACATCGCAAAAAGGTATGCTA-GAAAGACGCGG 57
consensus_10604#3      ------------------------------------------------------------
consensus_10604#0      ATTTGAACCCGATTTTACATCTGCATGGGATCATCTACAGTCTCAAAGTGAATGTTGTGG 120
consensus_10604#2      ------------------------------------------------------------
                                                                                   

consensus_10604#1      ATATC--GCTCGCTTCATATTAGTCGTTTACAATTGAAACGATGGTCATCTTA------- 108
consensus_10604#3      ------------------------------------------------------------
consensus_10604#0      ATTTTCGGGTCCTCAAATATATGCCTCTTCAAAATGGAAATACAGTCAACCTAATTCCTC 180
consensus_10604#2      ------------------------------------------------------------
                                                                                   

consensus_10604#1      ---TCTTGCCACTGCGTTTGCGATTCTCTCATTTGCTTTTATTTCTGGTGGAATTTGGCT 165
consensus_10604#3      ------------------------------------------------------------
consensus_10604#0      AACTTTTATCAGCTTAGTACCTGATTCTTGTCTTACACTTAAAAGCTTAGAAGAACAAGT 240
consensus_10604#2      ------------------------------------------------------------
                                                                                   

consensus_10604#1      ACTTGAAAATAATCGGATCGAATCCGA-------AATTATCGGCAGGCGATATTACTACG 218
consensus_10604#3      ------------------------------------------------------------
consensus_10604#0      ACTTGAAGATATAAAAACTAAGTCTGATTATGAAGAACCTAGACAAGTGACTTTTCAAAA 300
consensus_10604#2      ------------------------------------------------------------
                                                                                   

consensus_10604#1      AAGAAG---GAGTTTTGTTTGTAATCATTGGGATACTATTGCTTCT--TTCGCTTGTTTG 273
consensus_10604#3      ------------------------------------------------------------
consensus_10604#0      AGGATGCGCAGAATTTCTTTATACTCACATAGAAGGTGTTCTAAGCGGTTCGTTCATCGT 360
consensus_10604#2      ------------------------------------------------------------
                                                                                   

consensus_10604#1      TCAAGCTTTTATGATTCATCTATTGTTTGTTTCAAAAAAACCATGGAG-ATTTACTGAAG 332
consensus_10604#3      ------------------------------------------------------------
consensus_10604#0      ACCGGTTATTTCTCTTGTGATTGTATCTTTTTCATTTATCCTTGGAATCATTTTGTGTAA 420
consensus_10604#2      -------------------------------------------------AGTATATATTT 11
                                                                                   

consensus_10604#1      T--CAAGGTAA--AGAGAGCAGTTGCACTGTATTTAGTTTTTCTGTTTGCAGTGACAATC 388
consensus_10604#3      ------------------------------------------------------------
consensus_10604#0      TTTCGTGGTAGTTGGAGAAGAAATATAAAACAATGAGAAAGATATTTAACATCAACCCAA 480
consensus_10604#2      CAATAAAATACTTAGATATAAGTTACAACNNCCGACNNCAACANTGTTNCGTNATATTAT 71
                                                                                   

consensus_10604#1      CCTCATATTTATTGTTTGTACCATGTGAAAACAATTAGAACAAAATTAATATGGTCAATT 448
consensus_10604#3      -------------------------------CGGCACGAG--GAATTAATATGGTCAATT 27
consensus_10604#0      TTATAATCAGGCTGTTTTAATCTGGTCTGAAGAGAATCTCCAGTTTTTTTTTCTTTTTTT 540
consensus_10604#2      ATATATAAATCCATAATTCATATATATAGAGATAAATCNT--GTTTTAATTACATA---T 126
                                                                    **  *    *    *

consensus_10604#1      AAAGAACAAACTGAAGAGGCTTTGATTAGTTTGTACGGATTTGA---ACCCGATTT-TAC 504
consensus_10604#3      AAAGAACAAACTGAAGAGGCTTTGATTAGTTTGTACGGATTTGA---ACCCGATTT-TAC 83
consensus_10604#0      AAAGACCAAACT--ATAATTTCGCATTTGTTTTCGCTTTTTTTCTTTACTTAATTTATTT 598
consensus_10604#2      AAATAACTGACTGTTTAAAGTGACAATAATTTGAATAGTATTCA---CATTCACACACTC 183
                       *** * *  ***    *   *   * *  ***        **          *       

consensus_10604#1      ATCTGCATGGGATCATCTACAGTCTCAAAGTGAATGTTGTGGATTTTCGGGTCCT-CAAA 563
consensus_10604#3      ATCTGCATGGGATCATCTACAGTCTCAAAGTGAATGTTGTGGATTTTCGGGTCCT-CAAA 142
consensus_10604#0      TTTTAGAGAAAATTGTCTATT-TGCTACTATTAATAATATAGTATTACTGCTATTACCGT 657
consensus_10604#2      ACTCACTCACACACGCACGCA-CGCACATATGGAAACCGAAAAA-----AATAGT--AAC 235
                                                     *  *                 *  *     

consensus_10604#1      TAT-ATGCCTCTTCAAAATGGAAATACAGTC--AACCTAATTCCTCAACTTTTATCAGCT 620
consensus_10604#3      TAT-ATGCCTCTTCAAAATGGAAATAC--------------------------------- 168
consensus_10604#0      CACGATTTTTTTTCTGTTTAGAAAGTTTATT--TTTCAATCAGTTATTCATTTATT--TT 713
consensus_10604#2      AACTATTTTTTATGAATAGAGGGGGGTAACTGGCGTAGGTAATTAATTAAGTAAGTAATA 295
                        *  **   *  *       *                                       

consensus_10604#1      TAGTACCTGATTCTTGTCTTACACTTAAAAGCTTAGAAGAACAAGTACTTGAAGATATAA 680
consensus_10604#3      ------------------------------------------------------------
consensus_10604#0      TCACCATTGATT-TTCTCGTTGATTTGAA---TTGCGAGAAAAGGTATCTGATCAAGTAT 769
consensus_10604#2      TAAATATATATA--TGTATTAAAAATGAA---TTGCGAGAAAAGGTATCTGATCAAGTAT 350
                                                                                   

consensus_10604#1      AAACTAAGTCTGATTATGAAGAACCTAGACAAGTGACTT--TTCAAAAAGGATGCGCAGA 738
consensus_10604#3      ------------------------------------------------------------
consensus_10604#0      AATTTTATCATTGTTATTTAGTGCTTAGTCCGCCTTATTACTTTTATTACTCTACATATT 829
consensus_10604#2      AATTTTATCATTGTTATTTAGTGCTTAGTCCGCCTTATTACTTTTATTACTCTACATATT 410
                                                                                   

consensus_10604#1      ATTTCTTTATACTCACATAGAAGGTGTTCTAAGCGGTTCGTTCATCGTAC---------- 788
consensus_10604#3      ------------------------------------------------------------
consensus_10604#0      CTGTCTGTATATTCACTGATTTATACATACATGAAGTGTATTAGCTTTTTACGATGAATA 889
consensus_10604#2      CTGTCTGTATATTCGCTGATTTATACATACATGAAGTG---------------------- 448
                                                                                   

consensus_10604#1      ------------------------------------------------------------
consensus_10604#3      ------------------------------------------------------------
consensus_10604#0      AATCAATTCATGATGATGATTATGGTAAACTGATTTCATATTATTGTTTTTTTCCCAACG 949
consensus_10604#2      ------------------------------------------------------------
                                                                                   

consensus_10604#1      ------------------------------------------------
consensus_10604#3      ------------------------------------------------
consensus_10604#0      ATAAATCTACTTAGTGTACATTATTTTATGCAGTTATTTTAGTGTATA 997
consensus_10604#2      ------------------------------------------------