cluster # 10609

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Schistosoma mansoni
cluster # 10609 cluster # 10609 Sequences # 18 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10609#0 length = 758 sequences # 14

consensus_10609#1 length = 488 sequences # 3
consensus_10609#2 length = 373 sequences # 1

consensusID : consensus_10609#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 758
fasta sequence

                              [AAAACTGTTTCGTTATGCGTTACCTAAAGAACTTAGGAGGCGTCGTTAAATGCAGAACCATCCCGTTTTCTTGTGAAAACACTGATCTTTTTAGTGTTGTGCCTAAAAAGAAAGACATCCTCCCGCCAGCACCTGTTGTAAAGTCTTCTCATAGTCTACTTCGATCACTTCCGAGCTCTCCGTTCACTTCATGCACTTGCAGTTTATCTGCTCCAATGCAGGTCCGATCTGCACACACGGACGTTGCAAATGTTCCTGATTTCACGAAGTACCGCCTAGAGTCTACCAAAGACCCTCAATCACGGGCTGCTGACACCGAAATACAGCGCAAGATATTCTCTTATACGATGATGTTTGCGACTGCGATGATTGCCACTACATCAGCCAAGTACACCGTTAGAATGTTCATTGAACCTCTGGGACCTTCCTCTAAAACTATGGCAGAAGCCTCCACCGAAGTCAACTTGGCTTCTATCCCTG-AAGGAAAAAATGTTACAGTCAAATGGC-GTAATAAACCTCTTTTCATTCGCCATAGATCAGCGGAAGAAATCGCTCGTGAACGTGCTGTTCCTTTGGAAAGCTTAAGGGATCCTCAGCTAGATCAAGATCGTGTAAAAGTGGATAAATGGCTGATTTGTCTGGGCGTATGTACACATTTGGGTTGTGTTCCAGTAGCACACGCSGGGGATTT-CCCGGA-GTTACTTCTGT-CTTGTAGCGGTA-TCA-TATGATGCTCTGTCTGTAAGGAAGGCCCGCTCTCT]

[-] EMBL CD179195             [AAAACTGTTTCGTTATGCGTTACCTAAAGAACTTAGGAGGCGTCGTTAAATGCAGAACCATCCCGTTTTCTTGTGAAAACACTGATCTTTTTAGTGTTGTGCCTAAAAAGAAAGACATCCTCCCGCCAGCACCTGTTGTAAAGTCTTCTCATAGTCTACTTCGATCACTTCCGAGCTCTCCGTTCACTTCATGCACTTGCAGTTCATCTGCTCCAATGCAGGTCCGATCTGCACACACGGACGTTGCAAATGTTCCTGATTTCACGAAGTACCGCCTAGAGTCTACCAAAGACCCTCAATCACGGGCTGCTGACACCGAAATACAGCGCAAGATATTCTCTTATACGATGATGTTTGCGACTGCGATGATTGCCACTACATCAGCCAAGTACACCGTTAGAATGTTCATTGAA                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD134244             [   ACTGTTTCGTTATGCGTTACCTAAAGAACTTAGGAGGCGTCGTTAAATGCAGAACCATCCCGTTTTCTTGTGAAAACACTGATCTTTTTAGTGTTGTGCCTAAAAAGAAAGACATCCTCCCTCCAGCACCTGTTGTAAAGTCTTCTCATAGTCTACTTCGATCACTTCCGAGCTCTCCGTTCACTTCATGCACTTGCAGTTTATCTGCTCCAATGCAGGTCCGATCTGCACACACGGACGTTGCAAATGTTCCTGATTTCACGAAGTACCGCCTAGAGTCTACCAAAGACCCTCAATCACGGGCTGCTGACACCGAAATACAGCGCAAGATATTCTCTTATACGATGATGTTTGCGACTGCGATGATTGCCACTACATCAGCCTAGTGCA                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD118077             [                   TTACCTAAAGAACTTAGGAGGCGTCGTTAAATGCACAACCATCCCGTTTTCTTGTGAAAACACTGATCTTTTTACTGTTGTGCCTAAAAAGAAAGACATTCTTCCGCCAGCACCTGTTGTAAAGTCTTCTCATAGTCTACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD134543             [                               CTTAGGAGGCGTCGTTAAATGCAGAACCATCCCGTTTTCCTGTGAAAACACTGATCTTTTTAGTGTTGTGCCTAAAAAGAAAGACATCCTCCCTCCAGCACCTGTTGTAAAGTCTTCTCATAGTCTACTTCGATCACTTCCGAGCTCTCCGTTCACTTCATGCACTTGCAGTTTATCTGCTCCAATGCAGGTCCGATCTGCACACACGGACGTTGCAAATGTTCCTGATTTCACGAAGTACCGCCTAGAGTCTACCAAAGACCCTCAATCACGGGCTGCTGACACCGAAATACAGCGCAAGATATTCTCTTATACGATGATGTTTGCGACTGCGATGATTGCCACTACATCAGCCAAGTACACCGTTAGAATGTTCATTGAACCTCTGGGACCTTCCTCTAAAACTATGGCAGAAGCCTCCACCGAAGTCAACTTGGCTTCTATCCCTG AAGGAAAAAATGTTACAGTCAAATGGC GTAATAAACCTCTTTTCATTCGCCATAGATCAGCGGAAGAAA                                                                                                                                                                                                                      ]
[+] EMBL CD162815             [                                                                                                                                          TAAAGTCTTCTCATAGTCTACTTCGATCACTTCCGAGCTCTCCGTTCACTTCATGCACTTGCAGTTTATCTGCTCCAATGCAGGTCCGATCTGCACACACGGACGTTGCAAATGTTCCTGATTTCACGAAGTACCGCCTAGAGTCTACCAAAGACCCTCAATCACGGGCTGCTGACACCGAAATACAGCGCAAGATATTCTCTTATACGATGATGTTTGCGACTGCGATGATTGCCACTACATCAGCCAAGTACACCGTTAGAATGTT                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD163006             [                                                                                                                                          TAAAGTCTTCTCATAGTCTACTTCGATCACTTCCGAGCTCTCCGTTCACTTCATGCACTTGCAGTTTATCTGCTCCAATGCAGGTCCGATCTGCACACACGGACGTTGCAAATGTTCCTGATTTCACGAAGTACCGCCTAGAGTCTACCAAAGACCCTCAATCACGGGCTGCTGACACCGAAATACAGCGCAAGATATTCTCTTATACGATGATGTTTGCGACTGCGATGATTGCCACTACATCAGCCAAGTACACCGTTAGAATGTT                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD161604             [                                                                                                                                                            TACTTCGATCACTTCCGAGCTCTCCGTTCACTTCATGCACTTGCAGTTTATCTGCTCCAATGCAGGTCCGATCTGCACACACGGACGTTGCAAATGTTCCTGATTTCACGAAGTACCGCCTAGAGTCTACCAAAGACCCTCAATCACGGGCTGCTGACACCGAAATACAGCGCAAGATATTCTCTTATACGATGATGTTTGCGACTGCGATGATTGCCACTACATCAGCCAAGTACACCGTTAGAATGTTCATTGAACCTCTGGGACCTTCCTCTAAAACTATGGCAGAAGCCTCCACCGAAGTCAACTTGG                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AI639555             [                                                                                                                                                                                              ATGCACTTGCAGTTTATCTGCTCCAATGCAGGTCCGATCTGCACACACGGACGTTGCAAATGTTCCTGATTTCACGAAGTACCGCCTAGAGTCTACCAAAGACCCTCAATCACGGGCTGCTGACACCGAAATACAGCGCAAGATATTCTCTTATACGATGATGTTTGCGACTGCGATGATTGCCACTACATCAGCCAAGTACACCGTTAGAATGTTCATTGAACCTCTGGGACCTTCCTCTAAAACTATGGCAGAAGCCTCCACCGAAGTCAACTTGGCTTCTATCCCTGTAAGAGTCGCACGTTACGGCAAAATGGCGGTAATAAACCTCTTTTCATTCGCCATAGATCAGCGGGAGAAATCGCTCGTGAACGTGCTGTTCCTTTGGAAAGCTTAAGGGATCCTCAGCTAGATCAAGATCGTGTAAAAGTGGATAAATGGCTGATTTGTCTGGGCGTATGTACACATTTGGGTTGTGTTCCAGTAGCACACGCSGGGGATTT CCCGGA GTTACTTCTGT CTTGTAGCGGTA TCA TATGATGCTCTGTCTGTAAGGAAGGCCCGCTCTCT]
[-] EMBL CD121562             [                                                                                                                                                                                                  ACTTGCAGTTTATCTGCTCCAATGCAGGTCCGATCTGCACACACGGACGTTGCAAATGTTCCTGATTTCACGAAGTACCGCCTAGAGTCTACCAAAGACCCTCAATCACGGGCTGCTGACACCGAAATACAGCGCAAGATATTCTCTGATACGATGATGTTTGCGACTGCGATGATTGCCACTACATCAGCCAAGTACACCGTTAGAATGTTCATTGAACCTCTGGGACCTTCCTCTAAAACTAAGGCAGAAGCCTCCACCGAAGTCAACTTGGC                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AW017006             [                                                                                                                                                                                                                                                                TGATTTCACGAAGTACCGACTAGAGTCTACCAAAGACCCTCAATCACGGGCTGCTGACACCGAAATACAGCGCAAGATATTCTCTTATACAATGATGTTTGCGACTGCGATGATTGCCACTACATCAGCCAAGTACACCGTTAGAATGTTCATTGAACCTCTGGGACCTTCCTCTAAAACTATGGCAGAAGCCTCCACCGAAGTCAACTTGGCTTCTATCCCTG AAGGAAAAAATGTTACAGTCAAATGGC GTAATAAACCTCTTTTCATTCGCCATAGATCAGCGGAAGAAATCGCTCGTGAACGTGCTGTTCCTTTGGAAAGCTTAA                                                                                                                                                                                  ]
[-] EMBL CD136837             [                                                                                                                                                                                                                                                                                                       TCAATCACGGGCTGCTGACACCGAAATACAGCGCAAGATATTCTCTTATACGATGATGTTTGCGACTGCGATGATTGCCACTACATCAGCCAAGTACACCGTTAGAATGTTCATTGAACCTCTGGGACCTTCCTCTAAAACTATGGCAGAAGCCTCCACCGAAGTCAACTTGGCTTCTATCCCTG AAGGAAAAAATGTTACAGTCAAATGGC GTAATAAACCTCTTTTCATTCGCCATAGATCAGCGGAAGAAATCGCTCGTGAACGTGCTGTTCCTTTGGAAAGCTTAAGGGATCCTCAGCTAGATCAAGATCGTGTAAAAGTGGATAAATGGCTGATTTGTCTGGGCGTATGTACACATTTGGGTTGTGTTCCAGTAGCACACGCCGGCGATTTCCCCGGAGGTTACTTCTGTCCTTGTCACGGTAGTCATTATGAaggc                          ]
[+] EMBL CD097227             [                                                                                                                                                                                                                                                                                                                         CACCGAAATACAGCGCAAGATATTCTCTTATACGATGAAGTTTGCGACAGCGATGATTGCCACTACATCAGCCAAGTACACCGTTAGAATGTTCATTGAACCTCTGGGACCTTCCTCTAAAACTATGGCAGAAGCCTCCACCGAAGTCAACTTGGCTTCTATCCCTG AAGGAAAAAATGTTACAGTCAAATGGC GTAATAAACCTCTTTTCATTCGCCATAGATCAGCGGAAGAAATCGCTCGTGAACGTGCTGTTCCTTTGGAAAGCTTAAGGGATCCTCAGCT                                                                                                                                                                     ]
[+] EMBL CD089311             [                                                                                                                                                                                                                                                                                                                                   CAGCGCAAGATATTCTCTTATACGATGATGTTTGCGACTGCGATGATTGCCACTACATCAGCCAAGTACACCGTTAGAATGTTCATTGAACCTCTGGGACCTTCCTCTAAAACTATGGCAGAAGCCTCCACCGAAGTCAACTTGGCTTCTATCCCTG AAGGAAAAAATGTTACAGTCAAATGGC GTAATAAACCTCTTTTCATTCGCCATAGATCAGCGGAAGAAATCGCTCGTGAACGTGCTGTTCCTTTGGAAAGCTTAAGGGATCCTCAGCTAGATCAAGATCGTGTAAAAGTGGATAAATGGCTGATTTGTCTGGGCG                                                                                                                      ]
[-] EMBL CD089304             [                                                                                                                                                                                                                                                                                                                                    AGCGCAAGATATTCTCTTATACGATGATGTTTGCGACTGCGATGATTGCCACTACATCAGCCAAGTACACCGTTAGAATGTTCATTGAACCTCTGGGACCTTCCTCTAAAACTATGGCAGAAGCCTCCACCGAAGTCAACTTGGCTTCTATCCCTG AAGGAAAAAATGTTACAGTCAAATGGC GTAATAAACCTCTTTTCATTCGCCATAGATCAGCGGAAGAAATCGCTCGTGAACGTGCTGTTCCTTTGGAAAGCTTAAGGGATCCTCAGCTAGATCAAGATCGTGTAAAAGTGGATAAATGGCTGATTTGTCTGGGCGT                                                                                                                     ]




>consensus_10609#0
AAAACTGTTTCGTTATGCGTTACCTAAAGAACTTAGGAGGCGTCGTTAAATGCAGAACCA
TCCCGTTTTCTTGTGAAAACACTGATCTTTTTAGTGTTGTGCCTAAAAAGAAAGACATCC
TCCCGCCAGCACCTGTTGTAAAGTCTTCTCATAGTCTACTTCGATCACTTCCGAGCTCTC
CGTTCACTTCATGCACTTGCAGTTTATCTGCTCCAATGCAGGTCCGATCTGCACACACGG
ACGTTGCAAATGTTCCTGATTTCACGAAGTACCGCCTAGAGTCTACCAAAGACCCTCAAT
CACGGGCTGCTGACACCGAAATACAGCGCAAGATATTCTCTTATACGATGATGTTTGCGA
CTGCGATGATTGCCACTACATCAGCCAAGTACACCGTTAGAATGTTCATTGAACCTCTGG
GACCTTCCTCTAAAACTATGGCAGAAGCCTCCACCGAAGTCAACTTGGCTTCTATCCCTG
AAGGAAAAAATGTTACAGTCAAATGGCGTAATAAACCTCTTTTCATTCGCCATAGATCAG
CGGAAGAAATCGCTCGTGAACGTGCTGTTCCTTTGGAAAGCTTAAGGGATCCTCAGCTAG
ATCAAGATCGTGTAAAAGTGGATAAATGGCTGATTTGTCTGGGCGTATGTACACATTTGG
GTTGTGTTCCAGTAGCACACGCSGGGGATTTCCCGGAGTTACTTCTGTCTTGTAGCGGTA
TCATATGATGCTCTGTCTGTAAGGAAGGCCCGCTCTCT

consensusID : consensus_10609#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 488
fasta sequence

                              [GAGATTTTTCATTCGCCATAAATCAGCCGGAAGAAATCGCTCGTGAACGTGCTGTTCCTTTAGAAAGCTTAAGGGATCCTCAGCTAGATCAAGATTGTGTAAAAGTGGATAAATGGCTGATTTGTCTGGGCGTATGTACACATTTGGGTTGTATTCCAGTAGCACACGCCGGCG-ATTTCCCCGGAGGTTACTTCTGTCCTTGTCACGGTAGTCATTATGATGCATCTGGTCGTGTAAGGAAAGGCCCCGCTCCTCTTAACTTGGAAATACCTCAGTACAAGTTTGTGGATGAAAATACCGTCATTGTGGGATAAAACGGT-GATTCAATCTCCTT-GTTCGAAACACTAATTAGCGATACCTCCCTTTTTCATAACAGAGGATGCTTCTGATTTCTATTGGGTATATTTTAAGAAGTACTAACTTATCTTATAGTCTCGCTGTTAGAAGTTACATTTTCAAATATTAATATATCTCCAAAAAAACAAAAA]

[-] EMBL AI394846             [GAGATTTTTCATTCGCCATAAATCAGCCGGAAGAAATCGCTCGTGAACGTGCTGTTCCTTTAGAAAGCTTAAGGGATCCTCAGCTAGATCAAGATTGTGTAAAAGTGGATAAATGGCTGATTTGTCTGGGCGTATGTACACATTTGGGTTGTATTCCAGTAGCACACGCCGGAG ATTTCCCCGGAGGTTACTTCTGTCATTGTCACGGTAGTCATTATGATGCATCTGGTCGTGTAAGGAAAGGCCCCGCTCCTCTTAACTTGGAAATACCTCAGTACAAGTTTGTGGATGAAAATACCGTCATTGTGGGATAAAACGGT GATTCAATCTCCTT GTTCGAAACACTAATTAGCGATACCTCCCTTTTTCATAACAGAGGATGCTTCTGATTTCTATTGGGTATATTTTAAGAAGTACTAACTTATCTTATAGTCTCGCTGTTAGAAGTTACATTTTCAAATATTAATATATCTCCAAAAAAACAAAAA]
[+] EMBL CD145951             [                                                                              CTCAGCTAGATCAAGATCGTGTAAAAGTGGATAAATGGCTGATTTGTCTGGGCGTATGTACACATTTGGGTTGTGTTCCAGTAGCACACGCCGGCG ATTTCCCCGGAGGTTACTTCTGTCCTTGTCACGGTAGTCATTATGATGCATCTGGTCGTGTAAGGAAAGGCCCCGCTCCTCTTAACTTGGAAATACCTCAGTACAAGTTTGTGGATGAAAATACCGTCATTGTGGGATAAAACGGT GATTCAATCTCCTT GTTCGAAACACTAATTAGCGATACCTCCCTT                                                                                                                           ]
[+] EMBL SM420                [                                                                                                                                                                        CCGGCGNATTTCCCCGGAGGTTACTTCTGTCCTTGTCACGGTAGTCATTATGATGCATCTGGTCGTGTAAGGAAAGGCCCCGCTCCTCTTAACTTGGAAATACCTCAGTACAAGTTTGTGGATGAAAATACCGTCATTGTGGGATAAAACGGTGGATTCAATCTCCTTGGTTCGAAACACTAATTAGCGATACCTCCCTTTTTCATAACAG                                                                                                                ]




>consensus_10609#1
GAGATTTTTCATTCGCCATAAATCAGCCGGAAGAAATCGCTCGTGAACGTGCTGTTCCTT
TAGAAAGCTTAAGGGATCCTCAGCTAGATCAAGATTGTGTAAAAGTGGATAAATGGCTGA
TTTGTCTGGGCGTATGTACACATTTGGGTTGTATTCCAGTAGCACACGCCGGCGATTTCC
CCGGAGGTTACTTCTGTCCTTGTCACGGTAGTCATTATGATGCATCTGGTCGTGTAAGGA
AAGGCCCCGCTCCTCTTAACTTGGAAATACCTCAGTACAAGTTTGTGGATGAAAATACCG
TCATTGTGGGATAAAACGGTGATTCAATCTCCTTGTTCGAAACACTAATTAGCGATACCT
CCCTTTTTCATAACAGAGGATGCTTCTGATTTCTATTGGGTATATTTTAAGAAGTACTAA
CTTATCTTATAGTCTCGCTGTTAGAAGTTACATTTTCAAATATTAATATATCTCCAAAAA
AACAAAAA

consensusID : consensus_10609#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 373
fasta sequence

                              [TAAAACTGATCGCTAGCATTCCTAAACACTTACGAGGCGGAGGTAAATGCAGAACCATCCCGTTCTCTTGTGAAAACACTGAACATTTTATGCGCGTGCCTAAAAAGAAAGACATCCTCCCGCCAACACCTGTTGGAAAGACTTCTCATAGTCTACTTCGAATCACTTACGAGCTCTCCGTTCACGTTCATGCACTTGCAGATTATCTGCTCCAATGCAGGCCCGATCTGCACACACGGACGTTGCAGATGTTCCTGATTTCACGAAGACCCGCCTAGAGTCTACCAAAGACCCTCAATCACGGGCTGCTGACACCGAAATACAGCGCACGATATTCTCTTATACGATGATGTTTGCGACTGCGATGATTGCC]

[+] EMBL CD188626             [TAAAACTGATCGCTAGCATTCCTAAACACTTACGAGGCGGAGGTAAATGCAGAACCATCCCGTTCTCTTGTGAAAACACTGAACATTTTATGCGCGTGCCTAAAAAGAAAGACATCCTCCCGCCAACACCTGTTGGAAAGACTTCTCATAGTCTACTTCGAATCACTTACGAGCTCTCCGTTCACGTTCATGCACTTGCAGATTATCTGCTCCAATGCAGGCCCGATCTGCACACACGGACGTTGCAGATGTTCCTGATTTCACGAAGACCCGCCTAGAGTCTACCAAAGACCCTCAATCACGGGCTGCTGACACCGAAATACAGCGCACGATATTCTCTTATACGATGATGTTTGCGACTGCGATGATTGCC]




>consensus_10609#2
TAAAACTGATCGCTAGCATTCCTAAACACTTACGAGGCGGAGGTAAATGCAGAACCATCC
CGTTCTCTTGTGAAAACACTGAACATTTTATGCGCGTGCCTAAAAAGAAAGACATCCTCC
CGCCAACACCTGTTGGAAAGACTTCTCATAGTCTACTTCGAATCACTTACGAGCTCTCCG
TTCACGTTCATGCACTTGCAGATTATCTGCTCCAATGCAGGCCCGATCTGCACACACGGA
CGTTGCAGATGTTCCTGATTTCACGAAGACCCGCCTAGAGTCTACCAAAGACCCTCAATC
ACGGGCTGCTGACACCGAAATACAGCGCACGATATTCTCTTATACGATGATGTTTGCGAC
TGCGATGATTGCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10609#0      ------------------------------------------------------------
consensus_10609#2      ------------------------------------------------------------
consensus_10609#1      GAGATTTTTCATTCGCCATAAATCAGCCGGAAGAAATCGCTCGTGAACGTGCTGTTCCTT 60
                                                                                   

consensus_10609#0      -------------------------AAAACTGTTTCGTTATGCGTTACCTAAAGAACTTA 35
consensus_10609#2      ------------------------TAAAACTGAT-CGCTA-GCATT-CCTAAACA-CTTA 32
consensus_10609#1      TAGAAAGCTTAAGGGATCCTCAGCTAGATCAAGATTGTGTAAAAGTGGATAAATGGCTGA 120
                                                * * *      *        *   ****   ** *

consensus_10609#0      GGAGGCGTCG-TTAAATGCAGAACCATCCCGTTTTCTTGTGAAA-ACACTGATCTTTT-- 91
consensus_10609#2      CGAGGCGGAG-GTAAATGCAGAACCATCCCGTTCTCTTGTGAAA-ACACTGAACATTT-- 88
consensus_10609#1      TTTGTCTGGGCGTATGTACACATTTGGGTTGTATTCCAGTAGCACACGCCGGCGATTTCC 180
                          * *   *  **  * ** *        **  **  **   * ** * *    ***  

consensus_10609#0      --------TAGTGTTGTGCCTAAAAAGAAAGACATCCTCCCGC--CAGCACCTGTTGTAA 141
consensus_10609#2      --------TATGCGCGTGCCTAAAAAGAAAGACATCCTCCCGC--CAACACCTGTTGGAA 138
consensus_10609#1      CCGGAGGTTACTTCTGTCCTTGTCACGGTAGTCATTATGATGCATCTGGTCGTGTAAGGA 240
                               **     ** * *   * *  ** ***  *   **  *    * ***    *

consensus_10609#0      AGTCTTCTCATAGTCT--ACTTCGA-TCACTT----CCGAGCTCTCCGTTCAC-TTCATG 193
consensus_10609#2      AGACTTCTCATAGTCT--ACTTCGAATCACTT----ACGAGCTCTCCGTTCACGTTCATG 192
consensus_10609#1      AAGGCCCCGCTCCTCTTAACTTGGAAATACCTCAGTACAAGTTTGTGGATGAAAATACCG 300
                       *     *   *  ***  **** **   ** *     * ** *    * * *   *   *

consensus_10609#0      CACTTGCAGTTTATCTGCTCCAATGCAGGTCCGATCTGC-ACACACGGACGTTGCAAATG 252
consensus_10609#2      CACTTGCAGATTATCTGCTCCAATGCAGGCCCGATCTGC-ACACACGGACGTTGCAGATG 251
consensus_10609#1      TCATTGTGGGATAAA-ACGGTGATTCAATCTCCTTGTTCGAAACACTAAT-TAGCGATAC 358
                          ***  *  **    *    ** **    *  * * * * ****  *  * **     

consensus_10609#0      TTCCTGATTTCAC----GAAGTACCGCCTAGAGTCTACCAAAGACCCTCAATCACGGGCT 308
consensus_10609#2      TTCCTGATTTCAC----GAAGACCCGCCTAGAGTCTACCAAAGACCCTCAATCACGGGCT 307
consensus_10609#1      CTCCCTTTTTCATAACAGAGGATGCTTCTGATTTCTATTGGGTATATTTTAAGAAGTACT 418
                        ***   *****     ** *   *  **    ****      *   *  *  * *  **

consensus_10609#0      G-CTGACACCGAAATACAGCGCAAGATATTCTCTTATACGATGATGTTTGCGACTGCGAT 367
consensus_10609#2      G-CTGACACCGAAATACAGCGCACGATATTCTCTTATACGATGATGTTTGCGACTGCGAT 366
consensus_10609#1      AACTTATCTTATAGTCTCGCTGTTAGAAGTTACATTTTCAAATATTAATATATCTCCAAA 478
                         ** *      * *   **       * *  * * * * *  **   *    ** * * 

consensus_10609#0      GATTGCCACTACATCAGCCAAGTACACCGTTAGAATGTTCATTGAACCTCTGGGACCTTC 427
consensus_10609#2      GATTGCC----------------------------------------------------- 373
consensus_10609#1      AAAACAAAAA-------------------------------------------------- 488
                        *                                                          

consensus_10609#0      CTCTAAAACTATGGCAGAAGCCTCCACCGAAGTCAACTTGGCTTCTATCCCTGAAGGAAA 487
consensus_10609#2      ------------------------------------------------------------
consensus_10609#1      ------------------------------------------------------------
                                                                                   

consensus_10609#0      AAATGTTACAGTCAAATGGCGTAATAAACCTCTTTTCATTCGCCATAGATCAGCGGAAGA 547
consensus_10609#2      ------------------------------------------------------------
consensus_10609#1      ------------------------------------------------------------
                                                                                   

consensus_10609#0      AATCGCTCGTGAACGTGCTGTTCCTTTGGAAAGCTTAAGGGATCCTCAGCTAGATCAAGA 607
consensus_10609#2      ------------------------------------------------------------
consensus_10609#1      ------------------------------------------------------------
                                                                                   

consensus_10609#0      TCGTGTAAAAGTGGATAAATGGCTGATTTGTCTGGGCGTATGTACACATTTGGGTTGTGT 667
consensus_10609#2      ------------------------------------------------------------
consensus_10609#1      ------------------------------------------------------------
                                                                                   

consensus_10609#0      TCCAGTAGCACACGCSGGGGATTTCCCGGAGTTACTTCTGTCTTGTAGCGGTATCATATG 727
consensus_10609#2      ------------------------------------------------------------
consensus_10609#1      ------------------------------------------------------------
                                                                                   

consensus_10609#0      ATGCTCTGTCTGTAAGGAAGGCCCGCTCTCT 758
consensus_10609#2      -------------------------------
consensus_10609#1      -------------------------------