These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10613#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 867 fasta sequence [CGTGATTTGTTGCATGTTATATAAATGGATATCCGACCAAATCATACGTTATATGTGAATAATTTAAATGACAAAGTAAAGAAAAACGATTTGAAAAAAGCACTATATTATATATTTGGTCAACATGGTCGACTAATTGATATTATAGCTATGAAAACAATGAAAATGCGTGGACAGGCATTTATTATTTATCAGGATATTGCTTGTGCAACGCAAGCTTATCGTTCATTACAAGGATTTCAATTATTTCAACGACCTATGCGAGTAACTTATGCTAAAAAAGATTCGCAACAGATTATCTGTTTGAAAGGTGTCAGTGCTGAAGTTCAAAAGAGACGTGAAGAAGAACGTGAAAAA-CGTAGACGAAAGAAAAT-GGCACAACGTGCTGCAGCTGCAGCAGC-GGCTTTACAAGCAGCTAATCAATCAGTAAATGGTCCAGCGGGTACCGGTGGAGATATCAATGCATTG-TTAGATCAACCAAATCATATTTTATTTGTTAGTAATTTACCAGAAG-AAACTACTGATGCTATGCTTACAATGTTATTTAGTCAATTCTCGGGATTCAAAGAGGCTAGACGTGCTGCTGGTGGAGTTGGCTTT-GTCGAATATGATACTGAATCACAAGCTGCTGCTGCGCGATCTGCTTATGAAGGGTTTAAACTGACACCGACTCATGCTATGCAAATCACATTTGCTAA-GAAATAAATATCACTTCTCTTTTTCTTAACCTCGTTCATTAGTTAATTGCTACTATTAATATTATTATTGTTACTATTCTGATGATTACCTGCTAACACCGCATATTGAGGTGGGCGGTGGTTATACATACATAATATATATCTCGACCACCTCAAAAAAAAAAAAAAA] [+] EMBL CD079652 [CGTGATTTGTTGCATGTTATATAAATGGATATCCGACCAAATCATACGTTATATGTGAATAATTTAAATGACAAAGTAAAGAAAAACGATTTGAAAAAAGCACTATATTATATATTTGGTCAACATGGTCGACTAATTGATATTATAGCTATGAAAACAATGAAAATGCGTGGACAGGCATTTATTATTTATCAGGATATTGCTTGTGCAACGCAAGCTTATCGTTCATTACAAGGATTTCAATTATTTCAACGACCTATGCGAGTAACTTATGCTAAAAAAGATTCGCAACAGATTATCTGTTTGAAAGGTGTCAGTGCTGAAGTTCAAAAGAGACGTGAAGAAGAACGTGAAAAA CGTAGACGAAAGAAAAT GGCACAACGTGCTGCAGCTGCAGCAGC GGCTTTACAAGCAGCTAATCAATCAGTAAATGGTCCAGCGGGTACCGGTGGAGATATCAATGCATTG TTAGATCAACCAAATCATATTTTATTTGTTAGTAATTTACCAGAAG AAACTACTGATGCTATGCTTACAATGTTATTTAGTCAATTCTCGGGATTCAAAGAGGCTAGACGTGCTGCTGGTGGAGTTGGCTTT GTCGAATATGATACTGAATCACAAGCTGCTGCTGCGCGATCTGCTTATGAAGGGTTTAAACTGACACCGACTCATGCTATGCAAATCACATTTGCTAA GAAATAAATATCAC ] [+] EMBL AI976300 [ GATTTGTTGCATGTTATATAAATGGATATCCGACCAAATCATACGTTATATGTGAATAATTTAAATGACAAAGTAAAGAAAAACGATTTGAAAAAAGCACTATATTATATATTTGGTCAACATGGTCGACTAATTGATATTATAGCTATGAAAACAATGAAAATGCGTGGACAGGCATTTATTATTTATCAGGATATTGCTTGTGCAACGCAAGCTTATCGTTCATTACAAGGATTTCAATTATTTCAACGACCTATGCGAGTAACTTATGCTAAAAAAGATTCGCAACAGATTATCTGTTTGAAAGGTGTCAGTGCTGAAGTTCAAAAGAGACGTGAAGAAGAACGTGAAAAA CGTACACGAAAGAAAAT GGCACAACGTGCTGCAGCTGCAGCAGC GGCTTTACAAGCAGCTAATCAATCAGTAAATGGTCCAGCGGGTACCGGTGGAGATATCAATGCATTG TTAGATCAACCAAATCATATTTTATTTGTTAGTAATTTACCAGAAG AAACTACTGATGC ] [+] EMBL AI975036 [ GATTTGTTGCATGTTATATAAATGGATATCCGACCAAATCATACGTTATATGTGAATAATTTAAATGACAAAGTAAAGAAAAACGATTTGAAAAAAGCACTATATTATATATTTGGTCAACATGGTCGACTAATTGATATTATAGCTATGAAAACAATGAAAATGCGTGGACAGGCATTTATTATTTATCAGGATATTGCTTGTGCAACGCAAGCTTATCGTTCATTACAAGGATTTCAATTATTTCAACGACCTATGCGAGTAACTTATGCTAAAAAAGATTCGCAACAGATTATCTGTTTGAAAGGTGTCAGTGCTGAAGTTCAAAAGAGACGTGAAGAAGAACGTGAAAAA CGTAGACGAAAGAAAAT GGCACAACGTGCTGCAGCTGCAGCAGC GGCTTT ] [+] EMBL CD140063 [ ATGTTATATAAATGGATATCCGACCAAATCATACGTTATATGTGAATAATTTAAATGACAAAGTAAAGAAAAACGATTTGAAAAAAGCACTATATTATATATTTGGTCAACATGGTCGACTAATTGATATTATAGCTATGAAAACAATGAAAATGCGTGGACAGGCATTTATTATTTATCAGGATATTGCTTGTGCAACGCAAGCTTATCGTTCATTACAAGGATTTCAATTATTTCAACGACCTATGCGAGTAACTTATGCTAAAAAAGATTCGCAACAGATTATCTGTTTGAAAGGTGTCAGTGCTGAAGTTCAAAAGAGACGTGAAGAAGAACGTGAAAAA CGTAGACGAAAGAAAAT GGCACAACGTGCTGCAGCTGCAGCAGC GGCTTTACAAGCAGCTAATCAATCAGTAAATGGTCCAGCGGGTACCGGTGGAGAT ] [+] EMBL SMT14460 [ TTGAAAAAAGCACTATATTATATATTNGGNCAACATGGTCGACTAATTGATATTATAGCTATGAAAACAATGAAAATNCGTGGNCAGGCATTTNTTATTTATCAGGATATTGCTTGTGC ACGCAAGCTTATCGTTCATTACAAGGATTTCAATTATTTCAACGACCTATGCGAGTAACTTATGCTAAAAAAGATTCGCAACAGATTATCTGTTTGAAAGGTGTCAGTGCTGAAGTTCAAAAGAGACGTGAAGAAGAACGTGAAAAA CGTAGACGAAAGAAAAT GGCACAACGTCTTGCAGCTGCANAGGCGGGCTTTACAAGCAGCTAATCANTCAGTAAATGGTCCAGCGGGTACCCGTGGAGATATCAATGCAT ] [+] EMBL CD084036 [ TGCAACGCAAGCTTATCGTTCATTACAAGGATTTCAATTATTTCAACGACCTATGCGAGT ACTTATGCTAAAAAAGATTCGCAACAGATTATCTGTTTGAAAGGTGTCAGTGCTGAAGTTCAAAAGAGACGTGAAGAAGAACGTGAAAAA CGTAGACGAAAGAAAAT GGCACAACGTGCTGCAGCTGCAGCAGC GGCTTTACAAGCAGCTAATCAATCAGTAAATGGTCCAGCGGGTACCGGTGGAGATATCAATGCATTG TTAGATCAACCAAATCATATTTTATTTGTTAGTAATTTACCAGAAG AAACTACTGATGCTATGCTTACAATGTTATTTAGTCAATTCTCGGGATTCAAAGAGGCTAGACGTGCTG ] [+] EMBL CD137109 [ TAACTTATGCTAAAAAAGATTCGCAACAGATTATCTGTTTGAAAGGTGTCAGTGCTGAAGTTCGAAAGAGACGTGAAGAAGAACGTGAAAAA CGTAGACGAAAGAAAAT GGCACAACGTGCTGCAGCTGCAGCAGC GGCTTTACAAGCAGCTAATCAATCAGTAAATGGTCCAGCGGGTACCGGTGGAGATATCAATGCATTG TTAGATCAACCAAATCATATTTTATTTGTTAGTAATTTACCAGAAG AAACTACTGATGCTATGCTTACAATGTTATTTAGTCAATTCTCGGGATTCAAAGAGGCTAGACGTGCTGCTGGTGGAGTTGGCTTT GTCGAATATGATACTGAATCACAAGCTGCTGCTGC ] [-] EMBL SMT14459 [ GGTGTCAGTGCTGAAGTTCAAAAGAGNCGTGNAGAAGACCGTGAAAAACCGTAGACGAAANAAAATGGGCACNACGTGCTGCAGCTGCAGCAGC GGCTTTACAAGCAGCTAATCAATCAGTAAATGGTCCAGCGGGTACCGGTGGAGATATCAATGCATTG TTAGATCAACCAAATCATATTTTATTTGTTAGTAATTTACCAGNAG AAACTACTGATGCTATGCTTACAATGTTATTTAGTCAATTCTCGGGATTNAAAGAGGCTAGACGTGCTGCTGGTGGAGTTGGCTTT GTCGAATATGATACTGAATNACAAGCTGCT NTGCGCGATCTGCTTATGAAGGGTTTAAACTGACACCGACTCATGCTATGCNAATCACATTTGCTNA GAAATNAATATCACTTCT ] [+] EMBL SM642 [ ATGGTCCAGNGGGTACCGGTGGAGATATCAATGNATTGNTTAGATCAACCAANTCATATTTTATTTGTTAGTAATTTACCAGAAGNAAACTACTGATGCTATGCTTACAATGTTATTTAGNCANTTCTCGGGATTCAAAGAGGCTAGACGTGCTGNTGGTGGAGTTGGCTTTGGTCGAATATGATACTGAATCACAAGCTGCTGCTGCGCGATCTGCTTATGAAGGGTTTANACTGACACCGACTCATGCTATGCAAATCACATTTGCTAAGGAAATANATATCACT ] [-] EMBL AI395574 [ AAG AAA TACTGATGCTATGCTTACAATGTTATTTAGTCAATTCTCGGGATTCAAAGAGGCTAGACGTGCTGCTGGTGGAGTTGGCTTT GTCGAATATGATACTGAATCACAAGCTGCTGCTGCGCGATCTGCTTATGAAGGGTTTAAACTGACACCGACTCATGCTATGCAAATCACATTTGCTAA GAAATAAATATCACTTCTCTTTTTCTTAACCTCGTTCATTAGTTAATTGCTACTATTAATATTATTATTGTTACTATTCTGATGATTACCTGCTAACACCGCATATTGAGGTGGGCGGTGGTTATACATACATAATATATATCTCGACCACCTCAAAAAAAAAAAAAAA] consensusID : consensus_10613#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 755 fasta sequence [CTCGAGGCCAAAAATTCGGCACGAGGTGTTATATAAATGGATATCCGACCAAATCATACGTTAT-ATGTGAATAATTTAAATGACAAAGTAAAGAAAAACGATTTGAAAAAAGCACTATATTATATATTTGGTCAACATGGTCGACTAATTGATATTATAGCTATGAAAACAATGAAAATGCGTGGACAGGCATTTATTATTTATCAGGATATTGCTTGTGCAACGCAAGCTTATCGTTCATTACAAGGATTTCAATTATTTCAACGACCTATGCGAGTAACTTATGCTAAAAAAGATTCGCAACAGATTATCTGTTTGAAAGGTGTCAGTGCTGAAGTTCAAAAGAGACGTGAAGAAGAACGTGAAAAACGTAGACG-AA-AGAAAATGGCACAACGTGCTGCAGCTGCAGCAGCGGCTTTACAAGCAGCTAATCAATCAGTAAATGGTCCAGCGGGTACCGGTGGAGATATCAATGCATTGTTAGATCAACCAAATCATATTTTATTTGTTAGTAATTTACCAGAAGAAACTACTGATGCTATGCTTACAATGTTATTTAGTCAATTCTCGGGATTCAAAGAGGCTAGACGTGCTGCTGGTGGAGTTGGCTTTGTCGAATATGATACTGAATCACAAGCTGCTGCTGCGCGATCTGCTTATGAAGGGTTTAAACTGACACCGACTCATGCTATGCAAATCACATTTGCTAAGAAATAAATATCACTTCTCTTTTTCTTA--NN-ANAAAAAAAAAAAAA] [+] EMBL CD079407 [CTCGAGGCCAAAAATTCGGCACGAGGTGTTATATAAATGGATATCCGACCAAATCATACGTTAT ATGTGAATAATTTAAATGACAAAGTAAAGAAAAACGATTTGAAAAAAGCACTATATTATATATTTGGTCAACATGGTCGACTAATTGATATTATAGCTATGAAAACAATGAAAATGCGTGGACAGGCATTTATTATTTATCAGGATATTGCTTGTGCAACGCAAGCTTATCGTTCATTACAAGGATTTCAATTATTTCAACGACCTATGCGAGTAACTTATGCTAAAAAAGATTCGCAACAGATTATCTGTTTGAAAGGTGTCAGTGCTGAAGTTCAAAAGAGACGTGAAGAAGAACGTGAAAAACGTAGACG AA AGAAAATGGCACAACGTGCTGCAGCTGCAGCAGCGGCTTTACAAGCAGCTAATCAATCAGTAAATGGTCCAGCGGGTACCGGTGGAGATATCAATGCATTGTTAGATCAACCAAATCATATTTTATTTGTTAGTAATTTACCAGAAGAAACTACTGATGCTATGCTTACAATGTTATTTAGTCAATTCTCGGGATTCAAAGAGGCTAGACGTGCTGCTGGTGGAGTTGGCTTTGTCGAATATGATACTGAATCACAAGCTGCTGCTGCGCGATCTGCTTATGAAGGGTTTAAACTGACACCGACTCATGCTATGCAAATCACATTTGCTAAAAAATAAATATCACTTCTC ] [-] EMBL AI394764 [ CGACCAATTCATACGTTATAATGTGAATAATTTAAATGACAAAGTAAAGAAAAACGATTTGAAAAGGCCACTATATTATATATTTGTTCAACATGGTCGACTAATTGATATTTTAGCTATGAAAACAATGAAAATGCGTGGACAGGCATTTATTATTTATCAGGATATTGCTTGTGCAACGCAGGCTTTTCTTTCATAACAAGGATTTCATTTATTTCAACAACCTATGGGGTTAACTTATGTTAAAAAAGATTCCCAACAGATTATCTGTTTGAAAGGTGTCAGTGCTGAAGTTCAAAAGAGACGTGAAGAGGAACGTGAAAAACGTAGACG AA GGAAAATGGCACAACGTGCTGCAGTTGCAGCAGCGGCTTTACAAGCAGCTAATCAATCAGTAAATGGTCCAGCGGGTACCGGTGGAGATATCAATGCATTGTTAGATCAACCAAATCATATTTTATTTGTTAGTAATTTACCAGAAGAAACTACTGATGCTATGCTTACAATGTTATTTAGTCAATTCTCGGGATTCAAAGAGGCTAGACGTGCTGCTGGTGGAGTTGGCTTTGTCGAATATGATACTGAATCACAAGCTGCTGCTGCGCGATCTGCTTATGAAGGGTTTAAACTGACACCGACTCATGCTATGCAAATCACATTTGCTAAGAAATAAATATCATTTCTCTTTTTCTTT NN ANAAANAAAAAAAA ] [-] EMBL AI395619 [ tctgGAAGTCCAAAAGAGACGTGAGGAAGAACGTGAAAAACGTAGACGNAA AGAAAATGGCACAACGTGCTGCAGCTGCAGCAGCGGCTTTACAAGCAGCTAATCAATCAGTAAATGGTCCAGCGGGTACCGGTGGAGATATCAATGCATTGTTCGATCAACCAAATCATATTTTATTTGTTCGTAATTTACCAGAAGAAACTACTGATGCTATGCTTACAATGTTATTTAGTCAATTCTCGGGATTCAAAGAGGCTAGACGTGCTGCTGGTGGAGTTGGCTTTGTCGAATATGATACTGAATCACAAGCTGCTGCTGCGCGATCTGCTTATGAAGGGTTTAAACTGACACCGACTCATGCTATGCAAATCACATTTGCTAAGCAATAAATATCAGATCTCTTTTTCTTACGNNTATGTAAAAAAAAAAA] [-] EMBL AI394872 [ GACGTGANGAAGAACGTGAAAAACGTAGACG AANAGAAAATGGCACAACGTGCTGCAGCTGCAGCAGCGGCTTTACAAGCAGCTAATCAATCAGTAAATGGTCCAGCGGGTACCGGTGGAGATATCAATGCATTGTTAGATCAACCAAATCATATTTTATTTGTTAGTAATTTACCAGAAGAAACTACTGATGCTATGCTTACAATGTTATTTAGTCAATTCTCGGGATTCAAAGAGGCTAGACGTGCTGCTGGTGGAGTTGGCTTTGTCGAATATGATACTGAATCACAAGCTGCTGCTGCGCGATCTGCTTATGAAGGGTTTAAACTGACACCGACTCATGCTATGCAAATCACATTTGCTAAGAAATAAATATCACTTCTCTTTTTCTAA AA AAAAAAAAAAAAAA ] consensusID : consensus_10613#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 720 fasta sequence [TGATGTTCACACTGACTCAAACTCTGTACTTTTCTCTTCGAGTGCTTATCATTTTATCCATTGAGCTACCAAGTCCAGTGATCCACTAGAGTATTCATCAGCCTATGCGAGTAACTTATGCTAAAAAAGATTCGCAACAGATTATCTGTTTGAAAGGTGTCAGTGCTGAAGTTCAAAAGAGACGTGAAGAAGAACGTGAAAAACGTAGACGAAAGAAAATGGCACAACGTGCTGCAGCTGCAGCAGCGGCTTTACAAGCAGCTAATCAATCAGTAAATGGTCCAGCGGGTACCGGTGGAGATATCAATGCATTGTTAGATCAACCAAATCATATTTTATTTGTTAGTAATTTACCCGAAGAAACTACTGATGCTATGCTTCCAATGTTATTTAGTCAATTCTCGGGATTCAAAAAGGCTAAACGTGCTGCTGGTGGAGTTGGCTTTGTCGAATATGATACTGAATCCCAAGCTGCTGCTGCGCGATTTGGTTATGAAGGGTTTAAACTGACCCCGACTCCTGCTATGCAAATCCCCTTTGGTAAAAAATAAAAATGCCTTTTCTTTTTTTTACCCTCGTTCATTAGTTAATTGCTACTATTAATATTATTATTGTTACTATTCTGATGATTCCCTGCTAACCCCGCATATTAAGGTGGGCGGTGGTTATACATACATAATATATATTTCGCCCCCATCCCTTGATGAAGATGTAATAATC] [-] EMBL CD140325 [TGATGTTCACACTGACTCAAACTCTGTACTTTTCTCTTCGAGTGCTTATCATTTTATCCATTGAGCTACCAAGTCCAGTGATCCACTAGAGTATTCATCAGCCTATGCGAGTAACTTATGCTAAAAAAGATTCGCAACAGATTATCTGTTTGAAAGGTGTCAGTGCTGAAGTTCAAAAGAGACGTGAAGAAGAACGTGAAAAACGTAGACGAAAGAAAATGGCACAACGTGCTGCAGCTGCAGCAGCGGCTTTACAAGCAGCTAATCAATCAGTAAATGGTCCAGCGGGTACCGGTGGAGATATCAATGCATTGTTAGATCAACCAAATCATATTTTATTTGTTA ] [-] EMBL CD073680 [ ATTCGCCCCAGATTATTTGTTTTAAAGGGGTCAGTGCTGAAGTTCAAAAAAAACGTGAAAAAGAACGTGAAAAACGTAGACGAAAAAAAATGGCCCAACGTGCTGCAGCTGCAGCAGCGGCTTTTCAAGCAGGTAATCAATCAGTAAATGGTCCACCGGGGACCGGTGGAGATATCAATGCCTTGTTAGATCAACCCAATCATATTTTATTTGTTAGTAATTTACCCGAAGAAACTACTGATGCTATGCTTCCAATGTTATTTAGTCAATTCTCGGGATTCAAAAAGGCTAAACGTGCTGCTGGTGGAGTTGGCTTTGTCGAATATGATACTGAATCCCAAGCTGCTGCTGCGCGATTTGGTTATGAAGGGTTTAAACTGACCCCGACTCCTGCTATGCAAATCCCCTTTGGTAAAAAATAAAAATGCCTTTT ] [-] EMBL CD073914 [ ACAAGCAGTTAATCAATCAGTAAATGGTCCAGCGGGTACCGGTGGAGATATCAATGCATTGTTAGATCAACCAAATCATATTTTATTTGTTAGTAATTTACCAGAAGAAACTACTGATGCTATGCTTCCAATGTTATTTAGTCAATTCTCGGGATTCAAAAAGGCTAAACGTGCTGCTGGTGAAGTTGGCTTTGTCAAATATGATACTGAATCCCAAGCTGTTGTTGCGCGATTTGTTTATAAAGGGTTTAAACTGACCCCGACTCATGTTATGCAAATCCCATTTGTTAAAAAATAAATATCACTTCTCTTTTTTTTACCCTCGTTCATTAGTTAATTGCTACTATTAATATTATTATTGTTACTATTCTGATGATTCCCTGCTAACCCCGCATATTAAGGTGGGCGGTGGTTATACATACATAATATATATTTCGCCCCCATCCCTTGATGAAGATGTAATAATC] consensusID : consensus_10613#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 381 fasta sequence [AATGTTATTTAGTCAATTCTCGGGATTCAAAGAGCCTAGACGTGCTGCTGGTGGAGTTGGCTTTGTCGAATATGATACTGAATCACAAGCTGCTACTGCGCGATTTGCTTATGAAGGGTTTAAACTGACACCGACTCATGCTCTGCAAATCACATTTGCTAAGAAATAAATACCACTTCTCTTTTTCTTAACCTCGATCATTAGTTAATTGCTACTATTAATATTATTATTGCTACTATTCTGATGATTACCTGCTAACACCGCATATTGAGGTGGGCGGTGGTTATACAGACATAATATATATCTCGACCACATCACTTGATGAAGATTAATAATCATATCAACGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL AI395840 [AATGTTATTTAGTCAATTCTCGGGATTCAAAGAGCCTAGACGTGCTGCTGGTGGAGTTGGCTTTGTCGAATATGATACTGAATCACAAGCTGCTACTGCGCGATTTGCTTATGAAGGGTTTAAACTGACACCGACTCATGCTCTGCAAATCACATTTGCTAAGAAATAAATACCACTTCTCTTTTTCTTAACCTCGATCATTAGTTAATTGCTACTATTAATATTATTATTGCTACTATTCTGATGATTACCTGCTAACACCGCATATTGAGGTGGGCGGTGGTTATACAGACATAATATATATCTCGACCACATCACTTGATGAAGATTAATAATCATATCAACGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_10613#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 342 fasta sequence [CCCACGGGTACCCGTTGGGATATCCATGCATTGTTGGATCACCCAAATCGTATTTTATTTGTTAGTAATTTACCCGAAGAAACTACTGATGCTATGCTTACAATGTTATTTAGGCAATTCTCGGGATCCAAAGAGGCTAGACGTGCTGCTGGTGGAGTTGGCTTTGTCGAATATGATACTGAATCCCAAGCTGCTGCTGCGCGATCTGCTTTTGAAGGGTTTAAACTGACCCCGACTCATGCTATGCAAATCACATTTGCTAAGAAATAAATATCACTTCTCTTTTTCTTAAAAAGACAGACCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL AI394893 [CCCACGGGTACCCGTTGGGATATCCATGCATTGTTGGATCACCCAAATCGTATTTTATTTGTTAGTAATTTACCCGAAGAAACTACTGATGCTATGCTTACAATGTTATTTAGGCAATTCTCGGGATCCAAAGAGGCTAGACGTGCTGCTGGTGGAGTTGGCTTTGTCGAATATGATACTGAATCCCAAGCTGCTGCTGCGCGATCTGCTTTTGAAGGGTTTAAACTGACCCCGACTCATGCTATGCAAATCACATTTGCTAAGAAATAAATATCACTTCTCTTTTTCTTAAAAAGACAGACCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10613#1 CTCGAGGCCAAAAATTCGGCACGAGGTGTTATATAAATGGATATCCGACCAAATCATACG 60 consensus_10613#4 ------------------------------------------------------------ consensus_10613#0 ------------CGTGATTTGTTGCATGTTATATAAATGGATATCCGACCAAATCATACG 48 consensus_10613#2 ------------------------------------------------------------ consensus_10613#3 ------------------------------------------------------------ consensus_10613#1 TTATATGTGAATAATTTAAATGACAAAGTAAAGAAAAACGATTTGAAAAAAGCACTATAT 120 consensus_10613#4 ------------------------------------------------------------ consensus_10613#0 TTATATGTGAATAATTTAAATGACAAAGTAAAGAAAAACGATTTGAAAAAAGCACTATAT 108 consensus_10613#2 ------------------------------------------------------------ consensus_10613#3 ------------------------------------------------------------ consensus_10613#1 TATATATTTGGTCAACATGGTCGACTAATTGATATTATAGCTATGAAAACAATGAAAATG 180 consensus_10613#4 ------------------------------------------------------------ consensus_10613#0 TATATATTTGGTCAACATGGTCGACTAATTGATATTATAGCTATGAAAACAATGAAAATG 168 consensus_10613#2 ----------------------------------------------TGATGTTCACACTG 14 consensus_10613#3 ------------------------------------------------------------ consensus_10613#1 CGTGGACAGGCATTTATTATTTATCAGGATATTGCTTGTGCAACGCAAGCTTATCGTTCA 240 consensus_10613#4 ------------------------------------------------------------ consensus_10613#0 CGTGGACAGGCATTTATTATTTATCAGGATATTGCTTGTGCAACGCAAGCTTATCGTTCA 228 consensus_10613#2 ACTCAAACTCTGTACTTTTCTCTTCGAGTGCTTATCATTTTATCCATTGAGCTACCAAGT 74 consensus_10613#3 ------------------------------------------------------------ consensus_10613#1 TTACAAGGATTTCAATTATTTCAACGACCTATGCGAGTAACTTATGCTAAAAAAGATTCG 300 consensus_10613#4 ------------------------------------------------------------ consensus_10613#0 TTACAAGGATTTCAATTATTTCAACGACCTATGCGAGTAACTTATGCTAAAAAAGATTCG 288 consensus_10613#2 CCAGTGATCCACTAGAGTATTCATCAGCCTATGCGAGTAACTTATGCTAAAAAAGATTCG 134 consensus_10613#3 ------------------------------------------------------------ consensus_10613#1 CAACAGATTATCTGTTTGAAAGGTGTCAGTGCTGAAGTTCAAAAGAGACGTGAAGAAGAA 360 consensus_10613#4 ------------------------------------------------------------ consensus_10613#0 CAACAGATTATCTGTTTGAAAGGTGTCAGTGCTGAAGTTCAAAAGAGACGTGAAGAAGAA 348 consensus_10613#2 CAACAGATTATCTGTTTGAAAGGTGTCAGTGCTGAAGTTCAAAAGAGACGTGAAGAAGAA 194 consensus_10613#3 ------------------------------------------------------------ consensus_10613#1 CGTGAAAAACGTAGACGAAAGAAAATGGCACAACGTGCTGCAGCTGCAGCAGCGGCTTTA 420 consensus_10613#4 ------------------------------------------------------------ consensus_10613#0 CGTGAAAAACGTAGACGAAAGAAAATGGCACAACGTGCTGCAGCTGCAGCAGCGGCTTTA 408 consensus_10613#2 CGTGAAAAACGTAGACGAAAGAAAATGGCACAACGTGCTGCAGCTGCAGCAGCGGCTTTA 254 consensus_10613#3 ------------------------------------------------------------ consensus_10613#1 CAAGCAGCTAATCAATCAGTAAATGGTCCAGCGGGTACCGGTGGAGATATCAATGCATTG 480 consensus_10613#4 ---------------------------CCCACGGGTACCCGTTGGGATATCCATGCATTG 33 consensus_10613#0 CAAGCAGCTAATCAATCAGTAAATGGTCCAGCGGGTACCGGTGGAGATATCAATGCATTG 468 consensus_10613#2 CAAGCAGCTAATCAATCAGTAAATGGTCCAGCGGGTACCGGTGGAGATATCAATGCATTG 314 consensus_10613#3 ------------------------------------------------------------ consensus_10613#1 TTAGATCAACCAAATCATATTTTATTTGTTAGTAATTTACCAGAAGAAACTACTGATGCT 540 consensus_10613#4 TTGGATCACCCAAATCGTATTTTATTTGTTAGTAATTTACCCGAAGAAACTACTGATGCT 93 consensus_10613#0 TTAGATCAACCAAATCATATTTTATTTGTTAGTAATTTACCAGAAGAAACTACTGATGCT 528 consensus_10613#2 TTAGATCAACCAAATCATATTTTATTTGTTAGTAATTTACCCGAAGAAACTACTGATGCT 374 consensus_10613#3 ------------------------------------------------------------ consensus_10613#1 ATGCTTACAATGTTATTTAGTCAATTCTCGGGATTCAAAGAGGCTAGACGTGCTGCTGGT 600 consensus_10613#4 ATGCTTACAATGTTATTTAGGCAATTCTCGGGATCCAAAGAGGCTAGACGTGCTGCTGGT 153 consensus_10613#0 ATGCTTACAATGTTATTTAGTCAATTCTCGGGATTCAAAGAGGCTAGACGTGCTGCTGGT 588 consensus_10613#2 ATGCTTCCAATGTTATTTAGTCAATTCTCGGGATTCAAAAAGGCTAAACGTGCTGCTGGT 434 consensus_10613#3 --------AATGTTATTTAGTCAATTCTCGGGATTCAAAGAGCCTAGACGTGCTGCTGGT 52 ************ ************* **** ** *** ************* consensus_10613#1 GGAGTTGGCTTTGTCGAATATGATACTGAATCACAAGCTGCTGCTGCGCGATCTGCTTAT 660 consensus_10613#4 GGAGTTGGCTTTGTCGAATATGATACTGAATCCCAAGCTGCTGCTGCGCGATCTGCTTTT 213 consensus_10613#0 GGAGTTGGCTTTGTCGAATATGATACTGAATCACAAGCTGCTGCTGCGCGATCTGCTTAT 648 consensus_10613#2 GGAGTTGGCTTTGTCGAATATGATACTGAATCCCAAGCTGCTGCTGCGCGATTTGGTTAT 494 consensus_10613#3 GGAGTTGGCTTTGTCGAATATGATACTGAATCACAAGCTGCTACTGCGCGATTTGCTTAT 112 ******************************** ********* ********* ** ** * consensus_10613#1 GAAGGGTTTAAACTGACACCGACTCATGCTATGCAAATCACATTTGCTAAGAAATAAATA 720 consensus_10613#4 GAAGGGTTTAAACTGACCCCGACTCATGCTATGCAAATCACATTTGCTAAGAAATAAATA 273 consensus_10613#0 GAAGGGTTTAAACTGACACCGACTCATGCTATGCAAATCACATTTGCTAAGAAATAAATA 708 consensus_10613#2 GAAGGGTTTAAACTGACCCCGACTCCTGCTATGCAAATCCCCTTTGGTAAAAAATAAAAA 554 consensus_10613#3 GAAGGGTTTAAACTGACACCGACTCATGCTCTGCAAATCACATTTGCTAAGAAATAAATA 172 ***************** ******* **** ******** * **** *** ******* * consensus_10613#1 TCACTTCTCTTTTTCTTANNANAA--------AAAAAAAAAAA----------------- 755 consensus_10613#4 TCACTTCTCTTTTTCTTAAAAAGACAGACCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 333 consensus_10613#0 TCACTTCTCTTTTTCTTAACCTCGTTCATTAGTTAATTGCTACTATTAATATTATTATTG 768 consensus_10613#2 TGCCTTTTCTTTTTTTTACCCTCGTTCATTAGTTAATTGCTACTATTAATATTATTATTG 614 consensus_10613#3 CCACTTCTCTTTTTCTTAACCTCGATCATTAGTTAATTGCTACTATTAATATTATTATTG 232 *** ******* *** ** * consensus_10613#1 ------------------------------------------------------------ consensus_10613#4 AAAAAAAAA--------------------------------------------------- 342 consensus_10613#0 TTACTATTCTGATGATTACCTGCTAACACCGCATATTGAGGTGGGCGGTGGTTATACATA 828 consensus_10613#2 TTACTATTCTGATGATTCCCTGCTAACCCCGCATATTAAGGTGGGCGGTGGTTATACATA 674 consensus_10613#3 CTACTATTCTGATGATTACCTGCTAACACCGCATATTGAGGTGGGCGGTGGTTATACAGA 292 consensus_10613#1 ------------------------------------------------------------ consensus_10613#4 ------------------------------------------------------------ consensus_10613#0 CATAATATATATCTCGACCACCTCAAAAAAAAAAAAAAA--------------------- 867 consensus_10613#2 CATAATATATATTTCGCCCCCATCCCTTGATGAAGATGTAATAATC-------------- 720 consensus_10613#3 CATAATATATATCTCGACCACATCACTTGATGAAGAT-TAATAATCATATCAACGGCAAA 351 consensus_10613#1 ------------------------------ consensus_10613#4 ------------------------------ consensus_10613#0 ------------------------------ consensus_10613#2 ------------------------------ consensus_10613#3 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 381 |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||