cluster # 10619

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Schistosoma mansoni
cluster # 10619 cluster # 10619 Sequences # 19 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10619#0 length = 1829 sequences # 12

consensus_10619#1 length = 388 sequences # 7

consensusID : consensus_10619#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1829
fasta sequence

                              [TTGTTTCAAAAGAAAACAAGTCATTTTTATCAATCAGTAAATCTTATACATTTAATGAATAGAGGATAAAGAATAGAAACAAAGCAGGATTTTTCGGAAAAAAAAGCAGGTTATACAGTAAGATTTTTTAAATTCATTATTGGTAGAGAACTGAGATAAGTTCAAACGAAAATGTATTGTATAACAACAACAACAGTATCATAAACGCATGGTCGAGAAATCCACTTTGTTACTATGACGCTAACTGTGTAGATATGAAGAAATTAGAGGATAATCTCTTGAAGAAATCGTAAAAACACAGAATGGACACATACACACATACAAACACACACTAAAAGAATAATATTACTAATTACTCCCATTCAATGGTTGCTGGTGGTTTCGAAGTAAGATCATATAAAACTCGAGATATTCCAGGTACTTCCTCAGCTGCTTTCTGCATTTTGTAAACAACATCTTCTGGAATATGAACACCGGGAACAGCAGCAATACGAGTCATGAAATCAGCTGATTTCACAGGTCTGAGTACAACTGACCGTAAAACAGAAGGAATAGATACTACTTGACTTGGATCACGGTCAAAATGAATCGGTATAAGAACAACTGGCATTTGATCAACGTTGTTCATACAGCCATTGTTATGAAGTACTGACATAACCTTATCATCGACTTCTCGAAGAGTATCGATAACAGGTTCTCGAAGGTAAGTAATTGTAATATCATTTACTGGATGGACAACTTGTGGTCCTAATATATATACTACGCGATTGATATTATGGCATATCCTAGGGATTAAATTAGCCAAAAACGAAAGGGCGTCCCAATCTGGAGCAGTTGAACTAGATAAAGCACAAGCATAACTATAAGTACGATGATCACCTTGCACGCCGACTGAACGAATAGGTAGAACATAAGCGGCTAGAGACCGATTTGCTGTAATTTTTGATAAACGTTGTTGTTCCTCAGGTCTAGCAGCAGCATTGATTTTGTTTAAAAGTGCATGAGGCTTCTGCGACATTTGGTGATATCCAGAGATCATTTTTATAAGACTTGTTGTCTCCGAAAAATCTCGTTCAATGTATGGTTCTGCAGCACACAAAATTCTAACTGCTAAACCTGGACCAGGAAAAGGATGTCGGTTGACAATAGCCTCAGGAAGTCCAAGTTGCCTACCAATCTGTCTAACTTCATCCTTATGGAAGTCCGAAAGTGGTTCAACAACCCGACCCTGCTTCTGTAGAATCTGGACCAGTGTGGTTGTATTGTGATGAGTCTTAATTGTATCCGCTCGTTGACTAACTAAATTAGATGCGGATTCAATTAGATCAGGCCTCAATGTCCCTTGA-CAGAGCATTAAACTACTAGGATCTAACTGAAGTTCAGTCCATACTTCTTGGGCAACACGCACAAAAGTATCACCGATAATCTGTCGTTTATCTTCGGGGAAAATAGTAACTGTCCTAAGAGGTCCAATGGGAATGTTTCTTGATTCTAAATGTGGGTGAATTCCACCACCACTGACATGTGACTGTCTTTTAGTGTTAGATGTATCCGTAGACTGGAAGTATGCCTTTGAATCTAGCGTCGATCTGCACTCTTTGGTATTTGGATCTGACGTCTCGTCTGATGTTCCTGTGCTTATTTCAGAATCAGATTGTGTTTTGGAAGGACTGACGGAAGCAGGTGCCAAAGCCTCTGTCATTACATCAACGTGAAGCATTGTAGTCCCTGATAAGAATCGAAGACCTGCATTTATCAGATGGACTTTAATTCCCAATGACTTTAATGATTCTATCACTCTTAAAGATTCATTTTTTCTTAAGAAACCA]

[+] EMBL CD096663             [TTGTTTCAAAAGAAAACAAGTCATTTTTATCAATCAGTAAATCTTATACATTTAATGAATAGAGGATAAAGAATAGAAACAAAGCAGGATTTTTCGGAAAAAAAAGCAGGTTATACAGTAAGATTTTTTAAATTCATTATTGGTAGAGAACTGAGATAAGTTCAAACGAAAATGTATTGTATAACAACAACAACAGTATCATAAACGCATGGTCGAGAAATCCACTTTGTTACTATGACGCTAACTGTGTAGATATGAAGAAATTAGAGGATAATCTCTTGAAGAAATCGTAAAAACACAGAATGGACACATACACACATACAAACACACACTAAAAGAATAATATTACTAATTACTCCCATTCAATGGTTGCTGGTGGTTTCGAAGTAAGATCATATAAAACTCGAGATATTCCAGGTACTTCCTCAGCTGCTTTCTGCATTTTGTAAACAACATCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD197652             [                                                                                                                                                                                              atatgggATCATAAACGCATGGTCGAGAAATCCACTTTGTTACTATGACGCTAACTGTGTAGATATGAAGAAATTAGAGGATAATCTCTTGAAGAAATCGTAAAAACACAGAATGGACACATACACACATACAAACACACACTAAAAGAATAATATTACTAATTACTCCCATTCAATGGTTGCTGGTGGTTTCGAAGTAAGATCATATAAAACTCGAGATATTCCAGGTACTTCCTCAGCTGCTTTCTGCATTTTGTAAACAACATCTTCTGGAATATGAACACCGGGAACAGCAGCAATACGAGTCATGAAATCAGCTGATTTCACAGGTCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD197834             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACATCTTCTGGAATATGAACACCGGGAACAGCAGCAATACAAGTCATGAAATCAGCTGATTTCACAGGTCTGAGTACAACTGACCGTAAAACAGAAGGAATAGATACTACTTGACTTGGATCACGGTCAAAATGAATCGGTATAAGAACAACTGGCATTTGATCAACGTTGTTCATACAGCCATTGTTATGAAGCACTGACATAACCTTATCATCGACTTCTCGAAGAGTATCGATAACAGGTTCTCGAAGGTAAGTAATTGTAATATCATTTACTGGATGGACAACTTGTGGTCCTAATATATATACTACGCGATTGATATTATGGCATATCCTAGGGATTAAATTAGCCAAAAACGAAAGGGCGTCCCAATCTGGAGCAGTTGAACTAGATAAAGCACAAGCATAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD091941             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCGTAAAACAGAAGGAATAGATACTACTTGACTTGGATCACGGTCAAAATGAATCGGTATAAGAACAACTGGCATTTGATCAACGTTGTTCATACAGCCATTGTTATGAAGTACTGACATAACCTTATCATCGACTTCTCGAAGAGTATCGATAACAGGTTCTCGAAGGTAAGTAATTGTAATATCATTTACTGGATGGACAACTTGTGGTCCTAATATATATACTACGCGATTGATATTATGGCATATCCTAGGGATTAAATTAGCCAAAAACGAAAGGGCGTCCCAATCTGGAGCAGTTGAACTAGATAAAGCACAAGCATAACTATAAGTACGATGATCACCTTGCACGCCGACTGAACGAATAGGTAGAACATAAGCGGCTAGAGACCGATTTGCTGTAATTTTTGATAAACGTTGTTGTTCCTCAGGTCTAGCAGCAGCATTGATTTTGTTTAAAAGTGCATGAGGCTTCTGCGACATTTGGTGATATCCAGAGATCATTTTTATAAGACTTGTTGTCTCCGAAAAATCTCGTTCAATGTATGGTTCTGCAGCACACAAAATTCTAACTGCTAAACCTGGACCAGGAAAAGGATGTCGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD092033             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCGTATAACAGAAGGAATAGATACTACTTGACTTGGATCACGGTCAAAATGAATCGGTATAAGAACAACTGGCATTTGATCAACGTTGTTCATACGGCCATTGTTATGAAGTACTGACATAACCTTATCATCGACTTCTCGAAGAGTATCGATAACAGGTTCTCGAAGGTAAGTAATTGTAATATCATTTACTGGATGGACAACTTGTGGTCCTAATATATATACTACGCGATTGATATTATGGCATATCCTAGGGATTAAATTAGCCAAAAACGAAAGGGCGTCCCAATCTGGAGCAGTTGAACTAGATAAAGCACAAGCATAACTATAAGTACGATGATCACCTTGCACGCCGACTGAACGAATAGGTAGAACATAAGCGGCTAGAGACCGATTTGCTGTAATTTTTGATAAACGTTGTTGTTCCTCAGGTCTAGCAGCAGCATTGATTTTGTTTAAAAGTGCATGAGGCTTCTGCGACATTTGGTGATATCCAGAGATCATTTTTATAAGACTTGTTGTCTCCGAAAAATCTCGTTCAATGTATGGTTCTGCAGCACACAAAATTTTAACTGCTAAACCTGGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD091988             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCGTAAAACAGAAGGAATAGATACTACTTGACTTGGATCACGGTCAAAATGAATCGGTATAAGAACAACTGGCATTTGATCAACGTTGTTCATACAGCCATTGTTATGAAGTACTGACATAACCTTATCATCGACTTCTCGAAGAGTATCGATAACAGGTTCTCGAAGGTAAGTAATTGTAATATCATTTACTGGATGGACAACTTGTGGTCCTAATATATATACTACGCGATTGATATTATGGCATATCCTAGGGATTAAATTAGTCAAAAACGAAAGGGCGTCCCAATCTGGAGCAGTTGAACTAGATAAAGCACAAGCATAACTATAAGTACGATGATCACCTTGCACGCCGACTGAACGAATAGGTAGAACATAAGCGGCTAGAGACCGATTTGCTGTAATTTTTGATAAACGTTGTTGTTCCTCAGGTCTAGCAGCAGCATTGATTTTGTTTAAAAGTGCATGAGGCTTCTGCGACATTTGGTGATATCCAGAGATCATTTTTATAAGACTTGTTGTCTCCGAAAAATCTCGTTCAATGTACGGTTCTGCAGCACACAAAATTCTAACTGCTAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD165791             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGGTGATATCCAGAGATCATTTTTATAAGACTTGTTGTCTCCGAAAAATCTCGTTCAATGTATGGTTCTGCAGCACACAAAATTCTAACTGCTAAACCTGGACCAGGAAAAGGATGTCGGTTGACAATAGCCTCAGGAAGTCCAAGTTGCCTACCAATCTGTCTAACTTCATCCTTATGGAAGTCCGAAAGTGGTTCAACAACCCGACCCTGCTTCTGTAGAATCTGGACCAGTGTGGTTGTATTGTGATGAGTCTTAATTGTATCCGCTCGTTGACTAACTAAATTAGATGCGGATTCAATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD111542             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGATATCCAGAGATCATTTTTATAAGACTTGTTGTCTCCGAAAAATCTCGTTCAATGTATGGTTCTGCAGCACACAAAATTCTAACTGCTAAACCTGGACCAGGAAAAGGATGTCGGTTGACAATAGCCTCAGGAAGTCCAAGTTGCCTACCAATCTGTCTAACTTCATCCTTATGGAAGTCCGAAAGTGGTTCAACAACCCGACCCTGCTTCTGTAGAATCTGGACCAGTGTGGTTGTATTGTGATGAGTCTTAATTGTATCCGCTCGTTGACTAACTAAATTAGATGCGGATTCAATTAGATCAGGCCTCAATGTCCCTTGA CAGAGCATTAAACTACTAGGATCTAACTGAAGTTCAGTCCATACTTCTTGGGCAACACGCACAAAAGTATCACCGATAATCTGTCGTTTATCTTCGGGGAAAAT                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD135478             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCCAGAGATCATTTTTATAAGACTTGTTGTCTCCGAAAAATCTCGTTCAATGTATGGTTCTGCAGCACACAAAATTCTAACTGCTAAACCTGGACCAGGAAAAGGATGTCGGTTGACAATAGCCTCAGGAAGTCCAAGTTGCCTACCAACCTGTCTAACTTCATCCTTATGGAAGTCCGAAAGTGGTTCAACAACCCGACCCTGCTTCTGTAGAATCTGGACCAGTGTGGTTGTATTGTGATGAGTCTTAATTGTATCCGCTCGTTGACTAACTAAATTAGATGCGGATTCAATTAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD157272             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCAGAGATCATTTTTATAAGACTTGTTGTCTCCGAAAAATCTCGTTCAATGTATGGTTCTGCAGCACACAAAATTCTAACTGCTAAACCTGGACCAGGAAAAGGATGTCGGTTGACAATAGCCTCAGGAAGTCCAAGTTGCCTACCAATCTGTCTAACTTCATCCTTATGGAAGTCCGAAAGTGGTTCAACAACCCGAGCCTGCTTCTGTAGAATCTGGACCAGTGTGGTTGTATTGTGATGAGTCTTAATTGTATCCGCTCGTTGACTAACTAAATTAGATGCGGATTCAATTAGATCAGGCCTCAATGTCCCTTGACCAGAGCATTAAACTACTAGGATCTAACTGAAGTTCAGTCCATACTTCTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD098470             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAGTTCAGTCCATACTTCTTGGGCAACACGCACAAAAGTATCACCGATAATCTGTCGTTTATCTTCGGGGAAAATAGTAACTGTCCTAAGAGGTCCAATGGGAATGTTTCTTGATTCTAAATGTGGGTGAATTCCACCACCACTGACATGTGACTGTCTTTTAGTGTTAGATGTATCCGTAGACTGGAAGTATGCCTTTGAATCTAGCGTCGATCTGCACTCTTTGGTATTTGGATCTGACGTCTCGTCTGATGTTCCTGTGCTTATTTCAGAATCAGATTGTGTTTTGGAAGGACTGACGGAAGCAGGTGCCAAAGCCTCTGTCATTACATCAACGTGAAGCATTGTAGTCCCTGATAAGAATCGAAGACCTGCATTTATCAGATGGACTTTAATTCCCAATGACTTTAATGATTCTATCACTCTTAAAGATTCATTTTTTCTTAAGAAACC ]
[-] EMBL CD110977             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGTTCAGTCCATACTTCTTGGCCAACACGCACAAAAGTATCACCGATAATCTGTCGTTTATCTTCGGGGAAAATAGTAACTGTCCTAAGAGGTCCAATGGGAATGTTTCTTGATTCTAAATGTGGGTGAATTCCACCACCACTGACATGTGACTGTCTTTTAGTGTTAGATGTATCCGTAGACTGGAAGTATGCCATTGAATCTAGCGTCGATCTGCACTCTTTGGTATTTGGATCTGACGTCTCGTCTGATGTTCCTGTGCTTATTTCAGAATCAGATTGTGTTTTGGAAGGACTGACGGAAGCAGGTGCCAAAGCCTCTGTCATTACATCAACGTGAAGCATTGTAGTCCCTGATAAGAATCGAAGACCTGCATTTATCAGATGGACTTTAATTCCCAATGACTTTAATGATTCTATCACTCTTAAAGATTCATTTTTTCTTAAGAAACCA]




>consensus_10619#0
TTGTTTCAAAAGAAAACAAGTCATTTTTATCAATCAGTAAATCTTATACATTTAATGAAT
AGAGGATAAAGAATAGAAACAAAGCAGGATTTTTCGGAAAAAAAAGCAGGTTATACAGTA
AGATTTTTTAAATTCATTATTGGTAGAGAACTGAGATAAGTTCAAACGAAAATGTATTGT
ATAACAACAACAACAGTATCATAAACGCATGGTCGAGAAATCCACTTTGTTACTATGACG
CTAACTGTGTAGATATGAAGAAATTAGAGGATAATCTCTTGAAGAAATCGTAAAAACACA
GAATGGACACATACACACATACAAACACACACTAAAAGAATAATATTACTAATTACTCCC
ATTCAATGGTTGCTGGTGGTTTCGAAGTAAGATCATATAAAACTCGAGATATTCCAGGTA
CTTCCTCAGCTGCTTTCTGCATTTTGTAAACAACATCTTCTGGAATATGAACACCGGGAA
CAGCAGCAATACGAGTCATGAAATCAGCTGATTTCACAGGTCTGAGTACAACTGACCGTA
AAACAGAAGGAATAGATACTACTTGACTTGGATCACGGTCAAAATGAATCGGTATAAGAA
CAACTGGCATTTGATCAACGTTGTTCATACAGCCATTGTTATGAAGTACTGACATAACCT
TATCATCGACTTCTCGAAGAGTATCGATAACAGGTTCTCGAAGGTAAGTAATTGTAATAT
CATTTACTGGATGGACAACTTGTGGTCCTAATATATATACTACGCGATTGATATTATGGC
ATATCCTAGGGATTAAATTAGCCAAAAACGAAAGGGCGTCCCAATCTGGAGCAGTTGAAC
TAGATAAAGCACAAGCATAACTATAAGTACGATGATCACCTTGCACGCCGACTGAACGAA
TAGGTAGAACATAAGCGGCTAGAGACCGATTTGCTGTAATTTTTGATAAACGTTGTTGTT
CCTCAGGTCTAGCAGCAGCATTGATTTTGTTTAAAAGTGCATGAGGCTTCTGCGACATTT
GGTGATATCCAGAGATCATTTTTATAAGACTTGTTGTCTCCGAAAAATCTCGTTCAATGT
ATGGTTCTGCAGCACACAAAATTCTAACTGCTAAACCTGGACCAGGAAAAGGATGTCGGT
TGACAATAGCCTCAGGAAGTCCAAGTTGCCTACCAATCTGTCTAACTTCATCCTTATGGA
AGTCCGAAAGTGGTTCAACAACCCGACCCTGCTTCTGTAGAATCTGGACCAGTGTGGTTG
TATTGTGATGAGTCTTAATTGTATCCGCTCGTTGACTAACTAAATTAGATGCGGATTCAA
TTAGATCAGGCCTCAATGTCCCTTGACAGAGCATTAAACTACTAGGATCTAACTGAAGTT
CAGTCCATACTTCTTGGGCAACACGCACAAAAGTATCACCGATAATCTGTCGTTTATCTT
CGGGGAAAATAGTAACTGTCCTAAGAGGTCCAATGGGAATGTTTCTTGATTCTAAATGTG
GGTGAATTCCACCACCACTGACATGTGACTGTCTTTTAGTGTTAGATGTATCCGTAGACT
GGAAGTATGCCTTTGAATCTAGCGTCGATCTGCACTCTTTGGTATTTGGATCTGACGTCT
CGTCTGATGTTCCTGTGCTTATTTCAGAATCAGATTGTGTTTTGGAAGGACTGACGGAAG
CAGGTGCCAAAGCCTCTGTCATTACATCAACGTGAAGCATTGTAGTCCCTGATAAGAATC
GAAGACCTGCATTTATCAGATGGACTTTAATTCCCAATGACTTTAATGATTCTATCACTC
TTAAAGATTCATTTTTTCTTAAGAAACCA

consensusID : consensus_10619#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 388
fasta sequence

                              [ATTAAATTAGCCAAAAAC-GAAAGGGCGTCCCAATCTGGAGCAGTTGAACTAGATAAAGCACAAGC-ATAACTATAAGTACGATGATCACCTTGCACGCCGACTGAACGAATAGGTAGAACATAAGCGGCTAGAGACCGATTTGCTGTAATTTTTGATAAACGTTGTTGTTCCTCAGGTCTAGCAGCAGCATTGATTTTGTTTAAAAGTGCATGAGGCTTCTGCGACATTTGGTGATATCCAGAGATCATTTTTATAAGACTTGTTGTCTCCGAAAAATCTCGTT-CAATGTATGGTTCTGCAGCACACAAAATTCTAACTGCTAAACCTGGACCAGGAAAAGGATGTCGGTTGACAATAGCCTCAGGAAGTCCATCACACATGGACAACA]

[-] EMBL CD150548             [ATTAAATTAGCCAAAAAC GAAAGGGCGTCCCAATCTGGAGCAGTTGAACTAGATAAAGCACAAGC ATAACTATAAGTACGATGATCACCTTGCACGCCGACTGAACGAATAGGTAGAACATAAGCGGCTAGAGACCGATTTGCTGTAATTTTTGATAAACGTTGTTGTTCCTCAGGTCTAGCAGCAGCATTGATTTTGTTTAAAAGTGCATGAGGCTTCTGCGACATTTGGTGATATCCAGAGATCATTTTTATAAGACTTGTTGTCTCCGAAAAATCTCGTT CAATGTATGGTTCTGCAGCACACAAAATTCTAACTGCTAAACCTGGACCAGGAAAAGGATGTCGGTTGACAATAGCCTCAGGAAGTCCATCACACATGGACAACA]
[-] EMBL SMAA22185            [    AATTAGCCAAAAACGGAAAGGGCGGCCCAATCTGGAGCAGTTGAACTAGATAAAGCACAAGCAATAACTATAAGTACGATGATCACCTTGCACGCCGACTGAACGAATAGGTAGAACATAAGCGGCTAGAGA                                                                                                                                                                                                                                                               ]
[-] EMBL CD077929             [                             cgCAATCTGGAGCAGTTGAACTAGATAAAGCACAAGC ATAACTATAAGTACGATGATCACCTTGCACGCCGACTGAACGAATAGGTAGAACATAAGCGGCTAGAGACCGATTTGCTGTAATTTTTGATAAACGTTGTTGTTCCTCAGGTCTAGCAGCAGCATTGATTTTGTTTAAAAGTGCATGAGGCTTCTGCGACATTTGGTGATATCCAGAGATCATTTTTATAAGACTTGTTGTCTCCGAAAAATCTCGTT CAATGTATGGTTCcctc                                                                                        ]
[+] EMBL CD134929             [                                                                                                                                                                                                                                               CCAGAGATCATTTTTATAAGACTTGTTGTCTCCGAAAAATCTCGTT CAATGTATGGTTCTGCAGCACACAAAATTCTAACTGCTAAACCTGGA                                                          ]
[-] EMBL CD192314             [                                                                                                                                                                                                                                                CAGAGATCATTTTTATAAGACTTGTTGTCTCCGAAAAATCTCGTT CAATGTATGGTTCTGCAGCACACAAAATTCTAACTGCTAAACCTGGAC                                                         ]
[-] EMBL CD192737             [                                                                                                                                                                                                                                                CAGAGATCATTTTTATAAGACTTGTTGTCTCCGAAAAATCTCGTT CAATGTATGGTTCTGCAGCACACAAAATTCTAACTGCTAAACCTGGAC                                                         ]
[-] EMBL CD192633             [                                                                                                                                                                                                                                                            TTATAAGACTTGTTGTCTCCGAAAAATCTCGTTCCAATGTATGGTTCTGCAGCACACAAAATTCTAACTGCTAAACCTGGAC                                                         ]




>consensus_10619#1
ATTAAATTAGCCAAAAACGAAAGGGCGTCCCAATCTGGAGCAGTTGAACTAGATAAAGCA
CAAGCATAACTATAAGTACGATGATCACCTTGCACGCCGACTGAACGAATAGGTAGAACA
TAAGCGGCTAGAGACCGATTTGCTGTAATTTTTGATAAACGTTGTTGTTCCTCAGGTCTA
GCAGCAGCATTGATTTTGTTTAAAAGTGCATGAGGCTTCTGCGACATTTGGTGATATCCA
GAGATCATTTTTATAAGACTTGTTGTCTCCGAAAAATCTCGTTCAATGTATGGTTCTGCA
GCACACAAAATTCTAACTGCTAAACCTGGACCAGGAAAAGGATGTCGGTTGACAATAGCC
TCAGGAAGTCCATCACACATGGACAACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10619#0      TTGTTTCAAAAGAAAACAAGTCATTTTTATCAATCAGTAAATCTTATACATTTAATGAAT 60
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      AGAGGATAAAGAATAGAAACAAAGCAGGATTTTTCGGAAAAAAAAGCAGGTTATACAGTA 120
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      AGATTTTTTAAATTCATTATTGGTAGAGAACTGAGATAAGTTCAAACGAAAATGTATTGT 180
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      ATAACAACAACAACAGTATCATAAACGCATGGTCGAGAAATCCACTTTGTTACTATGACG 240
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      CTAACTGTGTAGATATGAAGAAATTAGAGGATAATCTCTTGAAGAAATCGTAAAAACACA 300
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      GAATGGACACATACACACATACAAACACACACTAAAAGAATAATATTACTAATTACTCCC 360
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      ATTCAATGGTTGCTGGTGGTTTCGAAGTAAGATCATATAAAACTCGAGATATTCCAGGTA 420
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      CTTCCTCAGCTGCTTTCTGCATTTTGTAAACAACATCTTCTGGAATATGAACACCGGGAA 480
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      CAGCAGCAATACGAGTCATGAAATCAGCTGATTTCACAGGTCTGAGTACAACTGACCGTA 540
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      AAACAGAAGGAATAGATACTACTTGACTTGGATCACGGTCAAAATGAATCGGTATAAGAA 600
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      CAACTGGCATTTGATCAACGTTGTTCATACAGCCATTGTTATGAAGTACTGACATAACCT 660
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      TATCATCGACTTCTCGAAGAGTATCGATAACAGGTTCTCGAAGGTAAGTAATTGTAATAT 720
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      CATTTACTGGATGGACAACTTGTGGTCCTAATATATATACTACGCGATTGATATTATGGC 780
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      ATATCCTAGGGATTAAATTAGCCAAAAACGAAAGGGCGTCCCAATCTGGAGCAGTTGAAC 840
consensus_10619#1      -----------ATTAAATTAGCCAAAAACGAAAGGGCGTCCCAATCTGGAGCAGTTGAAC 49
                                  *************************************************

consensus_10619#0      TAGATAAAGCACAAGCATAACTATAAGTACGATGATCACCTTGCACGCCGACTGAACGAA 900
consensus_10619#1      TAGATAAAGCACAAGCATAACTATAAGTACGATGATCACCTTGCACGCCGACTGAACGAA 109
                       ************************************************************

consensus_10619#0      TAGGTAGAACATAAGCGGCTAGAGACCGATTTGCTGTAATTTTTGATAAACGTTGTTGTT 960
consensus_10619#1      TAGGTAGAACATAAGCGGCTAGAGACCGATTTGCTGTAATTTTTGATAAACGTTGTTGTT 169
                       ************************************************************

consensus_10619#0      CCTCAGGTCTAGCAGCAGCATTGATTTTGTTTAAAAGTGCATGAGGCTTCTGCGACATTT 1020
consensus_10619#1      CCTCAGGTCTAGCAGCAGCATTGATTTTGTTTAAAAGTGCATGAGGCTTCTGCGACATTT 229
                       ************************************************************

consensus_10619#0      GGTGATATCCAGAGATCATTTTTATAAGACTTGTTGTCTCCGAAAAATCTCGTTCAATGT 1080
consensus_10619#1      GGTGATATCCAGAGATCATTTTTATAAGACTTGTTGTCTCCGAAAAATCTCGTTCAATGT 289
                       ************************************************************

consensus_10619#0      ATGGTTCTGCAGCACACAAAATTCTAACTGCTAAACCTGGACCAGGAAAAGGATGTCGGT 1140
consensus_10619#1      ATGGTTCTGCAGCACACAAAATTCTAACTGCTAAACCTGGACCAGGAAAAGGATGTCGGT 349
                       ************************************************************

consensus_10619#0      TGACAATAGCCTCAGGAAGTCCAAGTTGCCTACCAATCTGTCTAACTTCATCCTTATGGA 1200
consensus_10619#1      TGACAATAGCCTCAGGAAGTCCATCACACATGGACAACA--------------------- 388
                       ***********************     * *    * *                      

consensus_10619#0      AGTCCGAAAGTGGTTCAACAACCCGACCCTGCTTCTGTAGAATCTGGACCAGTGTGGTTG 1260
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      TATTGTGATGAGTCTTAATTGTATCCGCTCGTTGACTAACTAAATTAGATGCGGATTCAA 1320
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      TTAGATCAGGCCTCAATGTCCCTTGACAGAGCATTAAACTACTAGGATCTAACTGAAGTT 1380
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      CAGTCCATACTTCTTGGGCAACACGCACAAAAGTATCACCGATAATCTGTCGTTTATCTT 1440
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      CGGGGAAAATAGTAACTGTCCTAAGAGGTCCAATGGGAATGTTTCTTGATTCTAAATGTG 1500
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      GGTGAATTCCACCACCACTGACATGTGACTGTCTTTTAGTGTTAGATGTATCCGTAGACT 1560
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      GGAAGTATGCCTTTGAATCTAGCGTCGATCTGCACTCTTTGGTATTTGGATCTGACGTCT 1620
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      CGTCTGATGTTCCTGTGCTTATTTCAGAATCAGATTGTGTTTTGGAAGGACTGACGGAAG 1680
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      CAGGTGCCAAAGCCTCTGTCATTACATCAACGTGAAGCATTGTAGTCCCTGATAAGAATC 1740
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      GAAGACCTGCATTTATCAGATGGACTTTAATTCCCAATGACTTTAATGATTCTATCACTC 1800
consensus_10619#1      ------------------------------------------------------------
                                                                                   

consensus_10619#0      TTAAAGATTCATTTTTTCTTAAGAAACCA 1829
consensus_10619#1      -----------------------------