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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10624#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 980 fasta sequence
[GCATGAGAACAAAGTCAAATGATTTGTATAGAAGAAGAAGAACACGAAGACGACGAATGAGAAGTGATAATAGCAAGAAAGGCGCATCGATTTTTACTTCTCTTTTATAAAATATTCAAGAATATAAGCCTAATTAATTGGACATGTTTGGGGGGGGGGTAGAAGATGATTAACAGTGCATAATATATCAGTGTATAAATACGATTGGATATAAGTATACAAATCTTGTTCATTATGTACTTCTTTTTTTTGTTTTGATCACAGAGCAAGATGAAATGATTCAAGTCAAATTGTAGAATATGAATAATGGTCATTAGGATCTGTACAGTTTGGTCAAAAAAGACAAAACAAATAAAAATCAAAAAAAAATACTTAAGATAAGAGAACTTTTTATCCCATAACAGTAGTAATATTGCTAATGGTAATAATACGCTTATATATATCCATTCATAAGCATATTTCGCTTATATGAAGTAATTTGCATTACCAACAATGTAAATCATAATTAGGAAAGTTTTCTTCTATTGAATAGTTTTTTGTATACGTTCAATCCATTGCATAGCACTCTCTTGATTGATAGCACCGAGTTTGTATGTTCGATTATTAGTTTCAAGTTCAAATACAACAAATGAAGGTGATTTTCGTTGAATTGCAAAATTTTTAATAATTCTCACTGTTCTAACATCTTGTAAATCAATACAACCACGAGGTGAAGCATTAGCATAACTTTCATAATATTTTAATTGATGTCGATTTGTATCCAAAGCGAATAAACGTTGTTTCCATTGTTGTAAAAATTTACGATGACCTAATTTATATAAATAATCATAATATGATGCTGAAGCTAAATGTTCCGGCAAATGATGTTCAATAGTAGTACCACCACCACCACCGGATAGACTTTGACCACTTTGTGATTGACAATCAGATGTGTTAGTATGTGCTAACGATGAAGAACTNTCACTTAGTTTACGTTTTCC]
[+] EMBL CD197141 [GCATGAGAACAAAGTCAAATGATTTGTATAGAAGAAGAAGAACACGAAGACGACGAATGAGAAGTGATAATAGCAAGAAAGGCGCATCGATTTTTACTTCTCTTTTATAAAATATTCAAGAATATAAGCCTAATTAATTGGACATGTTTGGGGGGGGGGTAGAAGATGATTAACAGTGCATAATATATCAGTGTATAAATACGATTGGATATAAGTATACAAATCTTGTTCATTATGTACTTCTTTTTTTTGTTTTGATCACAGAGCAAGATGAAATGATTCAAGTCAAATTGTAGAATATGAATAATGGTCATTAGGATCTGTACAGTTTGGTCAAAAAAGACAAAACAAATAAAAATCAAAAAAAAATACTTAAGATAAGAGAACTTTTTATCCCATAACAGTAGTAATATTGCTAATGGTAATAATACGCTTATATATATCCATTCATAAGCATATTTCGCTTAT ]
[+] EMBL CD200590 [ GATTAACAGTGCATAATATATCAGTGTATAAATACGATTGAATATAAGTATACAAATCTTGTTCATTATGTACTTCTTTTTTTTGTTTTGATCACAGAACAAGATGAAATGATTCAAGTCAAATTGTAGAATATGAATAATGGTCATTAGGATCTGTACAGTTTTGTCAAAAAAGACAAAACAAATAAAAATCAAAAAAAAATACTTAAGATAAGAGAACTTTTTATCCCATAACAGTAGTAATATTGCTAATGGTAATAATACGCTTATATATATCCATTCATAAGCATATTTCGCTTATATGAAGTAATTTGCATTACCAACAATGTAAATCATAATTAGGAAAGTTTTCTTCTATTGAATAGTTTTTTGTATACGTTCAATCCATTGCATAGCACT ]
[+] EMBL CD137372 [ ATATTGCTAATGGTAATAATACGCTTATATATATCCATTCATAAGCATATTTCGCTTATATGAAGTAATTTGCATTACCAACAATGTAAATCATAATTAGGAAAGTTTTCTTCTATTGAATAGTTTTTTGTATACGTTCAATCCATTGCATAGCACTCTCTTGATTGATAGCACCGAGTTTGTATGTTCGATTATTAGTTTCAAGTTCAAATACAACAAATGAAGGTGATTTTCGTTGAATTGCAAAATTTTTAATAATTCTCACTGTTCTAACATCTTGTAAATCAATACAACCACGAGGTGAAGCATTAGCATAACTTTCATAATATTTTAATTGATGTCGATTTGTATCCAAAGCGAATAAACGTTGTTTCCATTGTTGTAAAAATTTACGATGACCTAATTTATATAAATAATCATAATATGATGCTGAAGCTAAATGTTCCGGCAAATGATGTTCAATAGTAGTACCACCACCACCACCGGATAGACTTTGACCACTTTGTGATTGACAATCAGATGTGTTAGTATGTGCTAACGATGAAGAACTNTCACTTAGTTTACGTTTTCC]
consensusID : consensus_10624#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 717 fasta sequence
[TCGGAGACATTTCAAAAGTTGT-TACAGTTTCTGCACATATCAAGTTTCGATTGTCAATTTTACTTCCCCTCAAAATAAACCGAACGTTTTTCTTCTGACACAACATGGGAGATCTGGAAAAAATATTTTACGACTTTTGTGATGCAGTCAAAAAAGGGTCAAGAACTGCAACGGACAAAA-CCATTAAAAAAATATGTACTGATTGTAATATCTATACGAAATCATTTAATGCAAATGCCGTAGATATTGCTTTTTGCAAACATCTTAAAAGTGCTAAAAAGGAAGTTGACTTCTCTGACTTTGTAAGATTTGTCGAAGGAGCAATGGCGGAAGAGTATGCAAAACAAAAAAATATATCGACAACTGACGCATCAAATGAAATAAAAAACAAAATAACCAACAGCTCTGGTCCTAAATCTCATGGAACTACTCAGGCTAGTAAAGATTCGGCGACATCCCGTCTTACTGATGTAAAAGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCAGGCTACGTTGGAGGCTATAAAGGAAAGGACACGTATGACAAAACCCACTAACAGTTATTTACTTTCTCGATGTTTACTTATTTTAGTTCTGATATATTATTAATTAATTTAATTCTTGTCATGATCACTAAATAAATGTCAT]
[+] EMBL CD161831 [TCGGAGACATTTCAAAAGTTGT TACAGTTTCTGCACATATCAAGTTTCGATTGTCAATTTTACTTCCCCTCAAAATAAACCGAACGTTTTTCTTCTGACACAACATGGGAGATCTGGAAAAAATATTTTACGACTTTTGTGATGCAGTCAAAAAAGGGTCAAGAACTGCAACGGACAAAA CCATTAAAAAAATATGTACTGATTGTAATATCTATACGAAATCATTTAATGCAAATGCCGTAGATATTGCTTTTTGCAAACATCTTAAAAGTGCTAAAAAGGAAGTTGACTTCTCTGACTTTGTAAGATTTGTCGAAGGAGCAATGGCGGAAGAGTATGCAAAACACAAAAATATATCGACAACTGACGCATCAAATGGAATAAAAAACAAAATAACCAACAGCTCTGGTCCTAAATCT ]
[+] EMBL CD097936 [TCGGAGACATTTCAAAAGTTGT TACAGTTTCTGCACATATCAAGTTTCGATTGTCAATTTTACTTCCCCTCAAAATAAACCGAACGTTTTTCTTCTGACACAACATGGGAGATCTGGAAAAAATATTTTACGACTTTTGTGATGCAGTCAAAAAAGGGTCAAGAACTGCAACGGACAAAA CCATTAAAAAAATATGTACTGATTGTAATATCTATACGAAATCATTTAATGCAAATGCCGTAGATATTGCTTTTTGCAAACATCTTAAAAGTGCTAAAAAGGAAGTTGACTTCTCTGACTTTGTAAGATTTGTCGAAGGAGCAATGGCGGAAGAGTATGCAAAGCAAAAAAATATATCGACAACTGACGCATCAAATGAAATAAAAAACAAAATAACCAACAGCTCTGGTCCTAAATCTCATGGAACTACTCAGGCTAGTAAAGATTCGGCGACATCCCGTCTTACTGATGTCACAGGATACACAGGCTCTCATAAAGAACGTTT ]
[+] EMBL CD078260 [ GACATTTCAAAAGTTGT TACAGTTTCTGCACATATCAAGTTTCGATTGTCAATTTTACTTCCCCTCAAAATAAACCGAACGTTTTTCTTCTGACACAACATGGGAGATCTGGAAAAAATATTTTACGACTTTTGTGATGCAGTCAAAAAAGGGTCAAGAACTGCAACGGACAAAA CCATTAAAAAAATATGTACTGATTGTAATATCTATACGAAATCATTTAATGCAAATGCCGTAGATATTGCTTTTTGCAAACATCTTAAAAGTGCTAAAAAGGAAGTTGACTTCTCTGACTTTGTAAGATTTGTCGAAGGAGCAATGGCGGAAGAGTATGCAAAACAAAAAAATATATCGACAACTGACGCATCAAATGAAATAAAAAACAAAATAACCAACAGCTCTGGTCCTAAATCTCATGGAACTACTCAGGCTAGTAAAGATTCGGCGACATCCCGTCTTACTGATGTAAAAGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCAGGCTACGTTGGAGGCTATAAAGGAAAGGACACGTATGACAAAAC ]
[+] EMBL CD078341 [ GACATTTCAAAAGTTGTNTACAGTTTCTGCACATATCAAGTTTCGATTGTCAATTTTACTTCCCCTCAAAATAAACCGAACGTTTTTCTTCTGACACAACATGGGAGATCTGGAAAAAATATTTTACGACTTTTGTGATGCAGTCAAAAAAGGGTCAAGAACTGCAACGGACAAAA CCATTAAAAAAATATGTACTGATTGTAATATCTATACGAAATCATTTAATGCAAATGCCGTAGATATTGCTTTTTGCAAACATCTTAAAAGTGCTAAAAAGGAAGTTGACTTCTCTGACTTTGTAAGATTTGTCGAAGGAGCAATGGCGGAAGAGTATGCAAAACAAAAAAATATATCGACAACTGACGCATCAAATGAAATAAAAAACAAAATAACCAACAGCTCTGGTCCTAAATCTCATGGAACTACTCAGGCTAGTAAAGATTCGGCGACATCCCGTCTTACTGATGTAAAAGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCA ]
[+] EMBL CD163515 [ AACGGACAAAA CCATTAAAAAAATATGTACTGATTGTAATATCTATACGAAATCATTTAATGCAAATGCCGTAGATATTGCTTTTTGCAAACATCTTAAAAGTGCTAAAAAGGAAGTTGACTTCTCTGACTTTGTAAGATTTGTCGAAGGAGCAATGGCGGAAGAGTATGCAAAACAAAAAAATATATCGACAACTGACGCATCAAATGAAATAAAAAACAAAATAACCAACAGCTCTGGTCCTAAATCTCATGGAACTACTCAGGCTAGTAAAGATTCGGCGACATCCCGTCTTACTGATGTAAAAGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCA ]
[-] EMBL CD163167 [ ACGGACAAAACCCATTAAAAAAATATGTACTGATTGTAATATCTATACGAAATCATTTAATGCAAATGCCGTAGATATTGCTTTTTGCAAACATCTTAAAAGTGCTAAAAAGGAAGTTGACTTCTCTGACTTTGTAAGATTTGTCGAAGGAGCAATGGCGGAAGAGTATGCAAAACAAAAAAATATATCGACAACTGACGCATCAAATGAAATAAAAAACAAAATAACCAACAGCTCTGGTCCTAAATCTCATGGAACTACTCAGGCTAGTAAAGATTCGGCGACATCCCGTCTTACTGATGTAAAAGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCAG ]
[-] EMBL CD072899 [ aaTAAAAAAATATGTACTGATGGTAATATCTATACGAAATCATTTAATGCAAATGCCGTAGATATTGCTTTTTGCAAACATCTTAAAAGTGCTAAAAAGGAAGTTGACTTCTCTGACTTTGTAAGATTTGTCGAAGGAGCAATGGCGGAAGAGTATGCAAAACAAAAAAATATATCGACAACTGACGCATCAAATGAAATAAAAAACAAAATAACCAACAGCTCTGGTCCTAAATCTCATGGAACTACTCAGGCTAGTAAAGATTCGGCGACATCCCGTCTTACTGATGTAAAAGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCAGGCTACGTTGGAGGCTATAAAGGAAAGGACACGTATGACAAAACCCACTAACAGTTATTTACTTTCTCGATGTTTACTTATTTTAGTTCTGATATATTATTAATTAATTTAATTCTTGTCATGATCACTAAATAAATGTCAT]
[+] EMBL CD192524 [ TGATGTAAAAGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCAGGCTACGTTGGAGGCTATAAAGGAAAGGACACGTATGACAAAACCCACTAACAGTTATTTAC ]
[+] EMBL CD192792 [ TGATGTAAAAGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCAGGCTACGTTGGAGGCTATAAAGGAAAGGACACGTATGACAAAACCCACTAACAGTTATTTAC ]
[+] EMBL CD134944 [ TGATGTAAAAGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCAGGCTACGTTGGAGGCTATAAAGGAAAGGACACGTATGACAAAACCCACTAACAGTTAT ]
[+] EMBL CD192173 [ TGATGTAAAGGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCAGGCTACGTTGGAGGCTATAAAGGAAAGGACACGTATGACAAAACCCACTAACAGTTA ]
consensusID : consensus_10624#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 569 fasta sequence
[TAAATCGTATAATAACAGTCTATGAGTCAAAATAAAGCTTACAATTAGAGGGATACGACTATGGATACTGTAGTTACTTAGCAATTTTATAATAGGAAATATACATATTATATTAGTCCATAATTAGTCCTCAAAAGTTACCATTCATAAATCACTTTGGGATATAACAGTTTTCAATCTTTGTTCGAATTATGATCCAAAATTATCCATTCACAATCACTTAGCCATATTGAACAAAACACTTTGGTATAGAATAATAACAAACTGCCATTTTGACTAGTTGGTATGTAAGAGAAAACACAGTTTGTCAAAACTTTGTTATATATTTCTATGACTTATTAATGACCTAAATAAGCCAAATTTCTGTCAGCGTATTTATATTATAGAAAAGACCAGGGGTACCTTAATGAACTGATACAAAATGCCATCATATATCTATTCAAGCTTTTCTGCCATCAAATTTGATATTTTCAGATTATCAATTCGAAAAAAAGTAGGTGATTTACATTGAAATTGGTTGACATTTCTAACCAAATATAACTCATGTACATGTCAAAGTATATACATTG]
[+] EMBL CD075979 [TAAATCGTATAATAACAGTCTATGAGTCAAAATAAAGCTTACAATTAGAGGGATACGACTATGGATACTGTAGTTACTTAGCAATTTTATAATAGGAAATATACATATTATATTAGTCCATAATTAGTCCTCAAAAGTTACCATTCATAAATCACTTTGGGATATAACAGTTTTCAATCTTTGTTCGAATTATGATCCAAAATTATCCATTCACAATCACTTAGCCATATTGAACAAAACACTTTGGTATAGAATAATAACAAACTGCCATTTTGACTAGTTGGTATGTAAGAGAAAACACAGTTTGTCAAAACTTTGTTATATATTTCTATGACTTATTAATGACCTAAATAAGCCAAATTTCTGTCAGCGTATTTATATTATAGAAAAGACCAGGGGTACCTTAATGAACTGATACAAAATGCCATCATATATCTATTCAAGCTTTTCTGCCATCAAATTTGATATTTTCAGATTATCAATTCGAAAAAAAGTAGGTGATTTACATTGAAATTGGTTGACATTTCTAACCAAATATAACTCATGTACATGTCAAAGTATATACATTG]
consensusID : consensus_10624#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 496 fasta sequence
[GACAATTGCTTATAACTCCCTATTGTTATTATTCCTATGGTATTGTTTACTTGAATCTTCCCATTGATGTTTAGGACTGCAATCCACCAGTCTCTTATTATAATATGTACATCCTGTGTGAACTGCCTCAACATTATATGCAAAAATGAACAGTGGTTAGCAGTGAAATCCAGATCACACGTTTCGTTCTATCTGGGACTTGTTAACTGGATATTGCTGAATCCTAGAGTTAGTGTTCACTCAGTACCTAGTTGGATAACATGATGGCATTTGAAGCGAATGGTACTGTGTTCGAGTCTCGGATTGGATATCAACTCTTGAATGCTGCTGGATCCAGGTGAAGAGTCTTGAATAGAATGAAACGCGCGTCCTAGATTCCATTGCTAGTCACTATCCATCTTTGCTTATTTTTATTATTATTTATCCCTCAATAAATTGAATATTGATCCTTAGTGTTTTTCGTATCTAACTGATAAAATCTTAGGATGTCAAACAG]
[+] EMBL CD088049 [GACAATTGCTTATAACTCCCTATTGTTATTATTCCTATGGTATTGTTTACTTGAATCTTCCCATTGATGTTTAGGACTGCAATCCACCAGTCTCTTATTATAATATGTACATCCTGTGTGAACTGCCTCAACATTATATGCAAAAATGAACAGTGGTTAGCAGTGAAATCCAGATCACACGTTTCGTTCTATCTGGGACTTGTTAACTGGATATTGCTGAATCCTAGAGTTAGTGTTCACTCAGTACCTAGTTGGATAACATGATGGCATTTGAAGCGAATGGTACTGTGTTCGAGTCTCGGATTGGATATCAACTCTTGAATGCTGCTGGATCCAGGTGAAGAGTCTTGAATAGAATGAAACGCGCGTCCTAGATTCCATTGCTAGTCACTATCCATCTTTGCTTATTTTTATTATTATTTATC ]
[-] EMBL CD088080 [ CTGTGTGAACTGCCTCAACATTATATGCAAAAATGAACAGTGGTTAGCAGTGAAATCCAGATCACACGTTTCGTTCTATCTGGGACTTGTTAACTGGATATAGCTGAATCCTAGAGTTAGTGTTCACTCAGTAGCTAGTTGGATAACATGATGGCATTTGAAGCGAATGGTACTGTGTTCGAGTCTCGGATTGGATATCAACTCTGGAATGCTGGTGGATCCAGGTGAAGAGTCTTGAATAGAATGAAACGCGCGTCCTAGATTCCATTGCTAGTCACTATCCATCTTTGCTTATTTTTATTATTATTTATCCCTCAATAAATTGAATATTGATCCTTAGTGTTTTTCGTATCTAACTGATAAAATCTTAGGATGTCAAACAG]
consensusID : consensus_10624#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 412 fasta sequence
[TATTAATTATGAATACAGTGATCTTAGTGACCTGAGGGCGTGACCACAGTGCCCAATGGACAACTTCTTGAGGCTGATCACACACGACCTTTTTGTGAGTAACTTTTGTGTTAGTTGCGTACTTGTTGGTACCTTACCATCGGAGACGGAAGTCCGTGGGATAAAGCGAGGTGTGCATTTTTACGGTCGGCCTTTTCTAACCTCACCCTTCCTAATGGGAAGGCAGCACCGCTGTCATGCTGGTTGTCTGAAAGAAACACCTTACTGCTGTCACACCTCTGTACAGTCAGCAGTAGGACTTCCCCCTTGGACCATGGGTTTGATGCTTTTAGTCTTACCGCTCTCCGACCGACCTGTCTGGCATGGTAGGACCTTGAGGAACAATTGTTCCAGCCAGCATAACTCGATCGGT]
[+] EMBL CD198630 [TATTAATTATGAATACAGTGATCTTAGTGACCTGAGGGCGTGACCACAGTGCCCAATGGACAACTTCTTGAGGCTGATCACACACGACCTTTTTGTGAGTAACTTTTGTGTTAGTTGCGTACTTGTTGGTACCTTACCATCGGAGACGGAAGTCCGTGGGATAAAGCGAGGTGTGCATTTTTACGGTCGGCCTTTTCTAACCTCACCCTTCCTAATGGGAAGGCAGCACCGCTGTCATGCTGGTTGTCTGAAAGAAACACCTTACTGCTGTCACACCTCTGTACAGTCAGCAGTAGGACTTCCCCCTTGGACCATGGGTTTGATGCTTTTAGTCTTACCGCTCTCCGACCGACCTGTCTGGCATGGTAGGACCTTGAGGAACAATTGTTCCAGCCAGCATAACTCGATCGGT]
consensusID : consensus_10624#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 409 fasta sequence
[CAGTGTGGTGTCTAACATATCGTCCATCCACCTAATTAATGTAGGTGATTGCGAAGATTTCTCCTTGTTTCACTGGGATGAAGTTTGATAAGGAGTTTCATGTTAAAATTTTTCACAACCGTCCATTTATTGTTGTTCAATGCGATCATATACCCTCGACCGTTCCTTTTATTTTGTTAATTATGGAGTGTCGGAAGATCAACGCACAGGGCTTCGCTTTAATCTAGGACTTGTTCCTTACATTTTCCAAGTTGAATTCCTCTTTACCGCCATCAATGTCCCGACCGTAGCTGCTACCAAGACGTGGTGATCGGGCTCGCCTATCGCGATGAACTAATCGAGCTATACTGGCTGGAACAATTGTTCTTCAAGGTCCTACCATGCCGGACAGGTCGGTTGAAGAGCGGTA]
[+] EMBL CD185048 [CAGTGTGGTGTCTAACATATCGTCCATCCACCTAATTAATGTAGGTGATTGCGAAGATTTCTCCTTGTTTCACTGGGATGAAGTTTGATAAGGAGTTTCATGTTAAAATTTTTCACAACCGTCCATTTATTGTTGTTCAATGCGATCATATACCCTCGACCGTTCCTTTTATTTTGTTAATTATGGAGTGTCGGAAGATCAACGCACAGGGCTTCGCTTTAATCTAGGACTTGTTCCTTACATTTTCCAAGTTGAATTCCTCTTTACCGCCATCAATGTCCCGACCGTAGCTGCTACCAAGACGTGGTGATCGGGCTCGCCTATCGCGATGAACTAATCGAGCTATACTGGCTGGAACAATTGTTCTTCAAGGTCCTACCATGCCGGACAGGTCGGTTGAAGAGCGGTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10624#0 GCATGAGAACAAAGTCAAATGATTTGTATAGAAGAAGAAGAACACGAAGACGACGAATGA 60
consensus_10624#1 ---TCGGAGACATTTCAAA-AGTTGTTACAGTTTCTGCACA-TATCAAGTTT-CGATTGT 54
consensus_10624#2 ------------------------------------------------------------
consensus_10624#4 ------------------------------------------------------------
consensus_10624#3 ------------------------------------------------------------
consensus_10624#5 ------------------------------------------------------------
consensus_10624#0 GAAGTGATAATAGCAAGAAAGGCGCATCGATTTTTACTTCTCTTTTATAAAATATTCAAG 120
consensus_10624#1 CAA-TTTTACTTCCCCTCAAAATAAACCGAACGTT--TTTCTTCTGACACAACATGGGAG 111
consensus_10624#2 ------------------------------------------------------------
consensus_10624#4 ------------------------------------------------------------
consensus_10624#3 ------------------------------------------------------------
consensus_10624#5 ------------------------------------------------------------
consensus_10624#0 AATATAAGCCTAATTAATTGGACATGTTTGGGGGGGGGGTAGAAGATGATTAACAGT--- 177
consensus_10624#1 ATCTGGAAA--AAATATTTTACGACTTTTGTGATGCAGTCAAAAAAGGGTCAAGAACTGC 169
consensus_10624#2 ------------------------------TAAATCGTATAATAACAGTCTATGAGTCAA 30
consensus_10624#4 --------------------------------------------------TATTAATTAT 10
consensus_10624#3 ------------------------------------------------------------
consensus_10624#5 ------------------------------------------------------------
consensus_10624#0 -GCATAATATATCAGTGTATAAATACG-AT-TGGATATAAG---TATACAAATCTTGTTC 231
consensus_10624#1 AACGGACAAAACCATTAAAAAAATATGTAC-TGATTGTAATATCTATACGAAA-TCATTT 227
consensus_10624#2 AATAAAGCTTACAATTAGAGGGATACGACTATGGATACTGTAGTTACTTAGCAATTTTAT 90
consensus_10624#4 GA-ATACAGTGATCTTAGTGACCTGAGGGCGTGACCACAGTGCCCAATGGACAACTTCTT 69
consensus_10624#3 -------------------------------------------------GACAATTGCTT 11
consensus_10624#5 --------------------CAGTGTGGTGTCTAACATATCGTCCATCCACCTAATTAAT 40
consensus_10624#0 ATTATGTACTTCTTTTTT-TTGTTT-TGATCACAGAGC---AAGATGAAATGATTCAAGT 286
consensus_10624#1 AATGCAAATGCCGTAGATATTGCTT-TTTGCAAACATCTTAAAAGTGCTAAAAAGGAAGT 286
consensus_10624#2 AATAGGAAATATACATATTATATTAGTCCATAATTAGTCCTCAAAAGTTACCATTCATAA 150
consensus_10624#4 GAGGCTGATCACACACGACCTTTTTGTGAGTAACTTTT------GTGTTA-GTTGCGTAC 122
consensus_10624#3 ATAACTCCCTATTGTTATTATTCCTATG-GTATTGTTTACTTGAATCTTCCCATTGATGT 70
consensus_10624#5 GTAGGTGATTGCGAAGATTTCTCCTTGTTTCACTGGGA--TGAAGTTTGATAAGGAGTTT 98
*
consensus_10624#0 CAAATTGTAGAATATGAATAATGGTCATTAGGATCTGTACAGTTTGGTCAAAAAAGACA- 345
consensus_10624#1 TGACTTCTCTGACTTTG-TAAGATTTGTCGAAG---GAGCAATGGCGGAAGAGTATGCA- 341
consensus_10624#2 ATCACTTTGGGATATAACAGTTTTCAATCTTTGTTCGAATTATGATCCAAAATTATCCAT 210
consensus_10624#4 T---TGTTGGTACCTTACCATCGGAGACGGAAGTCCGTGGGATAAAGCGAGG-TGTGCAT 178
consensus_10624#3 TTAGGACTGCAATCCACCAGTCTCTTATTATAATATGTACATCCTGTGTGAACTGCCTC- 129
consensus_10624#5 CATGTTAAAATTTTTCACAACCGTCCATTTATTGTTGTTCAATGCGATCATA-TACCCTC 157
*
consensus_10624#0 ----AAACAAATAAAAAT--CAAAAAAAAATACTTAAGATAAGA-----GAACTTTTTAT 394
consensus_10624#1 ----AAACAAAAAAATATATCGACAACTGACGCATCAAATGAAATAA-AAAACAAAATAA 396
consensus_10624#2 TCACAATCACTTAGCCATATTGA-ACAAAACACTTTGGTATAGAATA-ATAACAAACTG- 267
consensus_10624#4 TT--TTACGGTCGGCCTTTTCTA-ACCTCACCCTTCCTAATGGGAAG-GCAGCACCGCTG 234
consensus_10624#3 -----AACA-TTATATGCAAAAATGAACAGTGGTTAGCAGTGAAATCCAGATCACACGTT 183
consensus_10624#5 GACCGTTCCTTTTATTTTGTTAATTATGGAGTGTCGGAAGATCAACGCACAGGGCTTCGC 217
* * *
consensus_10624#0 CCCATAACAGTAGTAATATTGCTAATGGTAATAAT---ACGCTTATATATATCCATTCAT 451
consensus_10624#1 CCAACAGCTCTGGTCCTAAATCTCATGGAACTACTC--AGGCTAGTAAAGATTCGGCGAC 454
consensus_10624#2 CCATTTTGACTAGTTGGTATGTAAGAGAAAACACA-----GTTTGTCAAAACTTTGTTAT 322
consensus_10624#4 TCATGCTGGTTGTCTGAAAGAAACACCTTACTGCTGTCACACCTCTGTACAGTCAGCAGT 294
consensus_10624#3 TCGTTCTATCTGGGACTTGTTAACTGGATATTGCTGAATCCTAGAGTTAGTGTTCACTCA 243
consensus_10624#5 TTTAATCTAGGACTTGTTCCTTACATTTTCCAAGTTGAATTCCTCTTTACCGCCATCAAT 277
*
consensus_10624#0 AAGCATATT-TCGCTTATATGAAGTAATTTGCATTACCAACAATGTAAATCATAATTAGG 510
consensus_10624#1 AT-CCCGTC-TTACTGATGTAAAAGGAT--------------ACACAGGCTCTCATAAAG 498
consensus_10624#2 ATATTTCTA-TGACTTAT-TAATGACCTA---------AATAAGCCAAATTTCTGTCAGC 371
consensus_10624#4 AGGACT-TC-CCCCTTGGACCATGGGTTT---GATGCTTTTAGTCTTACCGCTCTCCGAC 349
consensus_10624#3 GTACCTAGT-TGGATAACATGATGGCATT-----------TGAAGCGAATGGTACTGTGT 291
consensus_10624#5 GTCCCGACCGTAGCTGCTACCAAGACGTGG-------TGATCGGGCTCGCCTATCGCGAT 330
* * *
consensus_10624#0 AAAGTTTTCTTCTATTGAATAGTTTTTTGTATACGTTCAATCCATTGCATAGCAC-TCTC 569
consensus_10624#1 AACGTTTTGATGC-TGAAACCGGTAAAGGTAAAGG---AATCGAGGGACGAGAGTATGTT 554
consensus_10624#2 GTATTTATATTAT-AGAAAAGACCAGGGGTACCTT---AATGAACTG-ATACAAAATGCC 426
consensus_10624#4 CGACCTGTCTGGCATGGTAGGACCTTGAGGAAC-----AATT-GTTCCAGCCAGCATAAC 403
consensus_10624#3 TCGAGTCTCGGATTGGATATCAACTCTTGAATGCT---GCTGGATCCAGGTGAAGAGTCT 348
consensus_10624#5 GAACTAATCGAGC--TATACTGGCTGGAACAATTGTTCTTCAAGGTCCTACCATGCCGGA 388
* * *
consensus_10624#0 TTGATTGATAGCACCGAGTTTG--TATGTTCGATTAT-TAGTTTCAAGTTCAAATACAAC 626
consensus_10624#1 ATGGATGAAAAAGCAGCTTCAGGCTACGTTGGAGGCTATAAAGGAAAGGACACGTATGAC 614
consensus_10624#2 ATCATATATCTATTCAAGCTT-------TTCTGCCATCAAATTTGATATTTTCAGATTAT 479
consensus_10624#4 TCGATCGGT--------------------------------------------------- 412
consensus_10624#3 TGAATAGAATGAAACGCGCGTC-CTAGATTCCATTGC--TAGTCACTATCCATCTTTGCT 405
consensus_10624#5 CAGGTCGGTTGAAGAGCGGTA--------------------------------------- 409
consensus_10624#0 AAATGAAGGTGATTTTCGTTGAATTGCAAAATTTTTAATAATTCTCACTGTTCTAACATC 686
consensus_10624#1 AAAACCCACTAACAGTTATTTACTTTCTCGATGTTTACTTATTTT---AGTTCTGATATA 671
consensus_10624#2 CAATTCGAAAAAAAGTAGGTGATTTACATTGAAATTGGTTGACAT-----TTCTAACCAA 534
consensus_10624#4 ------------------------------------------------------------
consensus_10624#3 TATTTTTATTATTATTTATCCCTCAATAAATTGAATATTGATCCTTAGTGTTTT--TCGT 463
consensus_10624#5 ------------------------------------------------------------
consensus_10624#0 TTGTAAATCA-ATACAACCACGAGGTGAAGCATTAGCATAACTTTCATAATATTTTAATT 745
consensus_10624#1 TTATTAATTA-ATTTAATTCTTGTCATGATCACTAA-ATAAATGTCAT------------ 717
consensus_10624#2 ATATAACTCATGTACATGTCAAAGTATATACATTG------------------------- 569
consensus_10624#4 ------------------------------------------------------------
consensus_10624#3 ATCTAACTGATAAAATCTTAGGATGTCAAACAG--------------------------- 496
consensus_10624#5 ------------------------------------------------------------
consensus_10624#0 GATGTCGATTTGTATCCAAAGCGAATAAACGTTGTTTCCATTGTTGTAAAAATTTACGAT 805
consensus_10624#1 ------------------------------------------------------------
consensus_10624#2 ------------------------------------------------------------
consensus_10624#4 ------------------------------------------------------------
consensus_10624#3 ------------------------------------------------------------
consensus_10624#5 ------------------------------------------------------------
consensus_10624#0 GACCTAATTTATATAAATAATCATAATATGATGCTGAAGCTAAATGTTCCGGCAAATGAT 865
consensus_10624#1 ------------------------------------------------------------
consensus_10624#2 ------------------------------------------------------------
consensus_10624#4 ------------------------------------------------------------
consensus_10624#3 ------------------------------------------------------------
consensus_10624#5 ------------------------------------------------------------
consensus_10624#0 GTTCAATAGTAGTACCACCACCACCACCGGATAGACTTTGACCACTTTGTGATTGACAAT 925
consensus_10624#1 ------------------------------------------------------------
consensus_10624#2 ------------------------------------------------------------
consensus_10624#4 ------------------------------------------------------------
consensus_10624#3 ------------------------------------------------------------
consensus_10624#5 ------------------------------------------------------------
consensus_10624#0 CAGATGTGTTAGTATGTGCTAACGATGAAGAACTNTCACTTAGTTTACGTTTTCC 980
consensus_10624#1 -------------------------------------------------------
consensus_10624#2 -------------------------------------------------------
consensus_10624#4 -------------------------------------------------------
consensus_10624#3 -------------------------------------------------------
consensus_10624#5 -------------------------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||