cluster # 10624

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Schistosoma mansoni
cluster # 10624 cluster # 10624 Sequences # 19 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10624#0 length = 980 sequences # 3
consensus_10624#1 length = 717 sequences # 11
consensus_10624#2 length = 569 sequences # 1

consensus_10624#3 length = 496 sequences # 2
consensus_10624#4 length = 412 sequences # 1
consensus_10624#5 length = 409 sequences # 1

consensusID : consensus_10624#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 980
fasta sequence

                              [GCATGAGAACAAAGTCAAATGATTTGTATAGAAGAAGAAGAACACGAAGACGACGAATGAGAAGTGATAATAGCAAGAAAGGCGCATCGATTTTTACTTCTCTTTTATAAAATATTCAAGAATATAAGCCTAATTAATTGGACATGTTTGGGGGGGGGGTAGAAGATGATTAACAGTGCATAATATATCAGTGTATAAATACGATTGGATATAAGTATACAAATCTTGTTCATTATGTACTTCTTTTTTTTGTTTTGATCACAGAGCAAGATGAAATGATTCAAGTCAAATTGTAGAATATGAATAATGGTCATTAGGATCTGTACAGTTTGGTCAAAAAAGACAAAACAAATAAAAATCAAAAAAAAATACTTAAGATAAGAGAACTTTTTATCCCATAACAGTAGTAATATTGCTAATGGTAATAATACGCTTATATATATCCATTCATAAGCATATTTCGCTTATATGAAGTAATTTGCATTACCAACAATGTAAATCATAATTAGGAAAGTTTTCTTCTATTGAATAGTTTTTTGTATACGTTCAATCCATTGCATAGCACTCTCTTGATTGATAGCACCGAGTTTGTATGTTCGATTATTAGTTTCAAGTTCAAATACAACAAATGAAGGTGATTTTCGTTGAATTGCAAAATTTTTAATAATTCTCACTGTTCTAACATCTTGTAAATCAATACAACCACGAGGTGAAGCATTAGCATAACTTTCATAATATTTTAATTGATGTCGATTTGTATCCAAAGCGAATAAACGTTGTTTCCATTGTTGTAAAAATTTACGATGACCTAATTTATATAAATAATCATAATATGATGCTGAAGCTAAATGTTCCGGCAAATGATGTTCAATAGTAGTACCACCACCACCACCGGATAGACTTTGACCACTTTGTGATTGACAATCAGATGTGTTAGTATGTGCTAACGATGAAGAACTNTCACTTAGTTTACGTTTTCC]

[+] EMBL CD197141             [GCATGAGAACAAAGTCAAATGATTTGTATAGAAGAAGAAGAACACGAAGACGACGAATGAGAAGTGATAATAGCAAGAAAGGCGCATCGATTTTTACTTCTCTTTTATAAAATATTCAAGAATATAAGCCTAATTAATTGGACATGTTTGGGGGGGGGGTAGAAGATGATTAACAGTGCATAATATATCAGTGTATAAATACGATTGGATATAAGTATACAAATCTTGTTCATTATGTACTTCTTTTTTTTGTTTTGATCACAGAGCAAGATGAAATGATTCAAGTCAAATTGTAGAATATGAATAATGGTCATTAGGATCTGTACAGTTTGGTCAAAAAAGACAAAACAAATAAAAATCAAAAAAAAATACTTAAGATAAGAGAACTTTTTATCCCATAACAGTAGTAATATTGCTAATGGTAATAATACGCTTATATATATCCATTCATAAGCATATTTCGCTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD200590             [                                                                                                                                                                       GATTAACAGTGCATAATATATCAGTGTATAAATACGATTGAATATAAGTATACAAATCTTGTTCATTATGTACTTCTTTTTTTTGTTTTGATCACAGAACAAGATGAAATGATTCAAGTCAAATTGTAGAATATGAATAATGGTCATTAGGATCTGTACAGTTTTGTCAAAAAAGACAAAACAAATAAAAATCAAAAAAAAATACTTAAGATAAGAGAACTTTTTATCCCATAACAGTAGTAATATTGCTAATGGTAATAATACGCTTATATATATCCATTCATAAGCATATTTCGCTTATATGAAGTAATTTGCATTACCAACAATGTAAATCATAATTAGGAAAGTTTTCTTCTATTGAATAGTTTTTTGTATACGTTCAATCCATTGCATAGCACT                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD137372             [                                                                                                                                                                                                                                                                                                                                                                                                                         ATATTGCTAATGGTAATAATACGCTTATATATATCCATTCATAAGCATATTTCGCTTATATGAAGTAATTTGCATTACCAACAATGTAAATCATAATTAGGAAAGTTTTCTTCTATTGAATAGTTTTTTGTATACGTTCAATCCATTGCATAGCACTCTCTTGATTGATAGCACCGAGTTTGTATGTTCGATTATTAGTTTCAAGTTCAAATACAACAAATGAAGGTGATTTTCGTTGAATTGCAAAATTTTTAATAATTCTCACTGTTCTAACATCTTGTAAATCAATACAACCACGAGGTGAAGCATTAGCATAACTTTCATAATATTTTAATTGATGTCGATTTGTATCCAAAGCGAATAAACGTTGTTTCCATTGTTGTAAAAATTTACGATGACCTAATTTATATAAATAATCATAATATGATGCTGAAGCTAAATGTTCCGGCAAATGATGTTCAATAGTAGTACCACCACCACCACCGGATAGACTTTGACCACTTTGTGATTGACAATCAGATGTGTTAGTATGTGCTAACGATGAAGAACTNTCACTTAGTTTACGTTTTCC]




>consensus_10624#0
GCATGAGAACAAAGTCAAATGATTTGTATAGAAGAAGAAGAACACGAAGACGACGAATGA
GAAGTGATAATAGCAAGAAAGGCGCATCGATTTTTACTTCTCTTTTATAAAATATTCAAG
AATATAAGCCTAATTAATTGGACATGTTTGGGGGGGGGGTAGAAGATGATTAACAGTGCA
TAATATATCAGTGTATAAATACGATTGGATATAAGTATACAAATCTTGTTCATTATGTAC
TTCTTTTTTTTGTTTTGATCACAGAGCAAGATGAAATGATTCAAGTCAAATTGTAGAATA
TGAATAATGGTCATTAGGATCTGTACAGTTTGGTCAAAAAAGACAAAACAAATAAAAATC
AAAAAAAAATACTTAAGATAAGAGAACTTTTTATCCCATAACAGTAGTAATATTGCTAAT
GGTAATAATACGCTTATATATATCCATTCATAAGCATATTTCGCTTATATGAAGTAATTT
GCATTACCAACAATGTAAATCATAATTAGGAAAGTTTTCTTCTATTGAATAGTTTTTTGT
ATACGTTCAATCCATTGCATAGCACTCTCTTGATTGATAGCACCGAGTTTGTATGTTCGA
TTATTAGTTTCAAGTTCAAATACAACAAATGAAGGTGATTTTCGTTGAATTGCAAAATTT
TTAATAATTCTCACTGTTCTAACATCTTGTAAATCAATACAACCACGAGGTGAAGCATTA
GCATAACTTTCATAATATTTTAATTGATGTCGATTTGTATCCAAAGCGAATAAACGTTGT
TTCCATTGTTGTAAAAATTTACGATGACCTAATTTATATAAATAATCATAATATGATGCT
GAAGCTAAATGTTCCGGCAAATGATGTTCAATAGTAGTACCACCACCACCACCGGATAGA
CTTTGACCACTTTGTGATTGACAATCAGATGTGTTAGTATGTGCTAACGATGAAGAACTN
TCACTTAGTTTACGTTTTCC

consensusID : consensus_10624#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 717
fasta sequence

                              [TCGGAGACATTTCAAAAGTTGT-TACAGTTTCTGCACATATCAAGTTTCGATTGTCAATTTTACTTCCCCTCAAAATAAACCGAACGTTTTTCTTCTGACACAACATGGGAGATCTGGAAAAAATATTTTACGACTTTTGTGATGCAGTCAAAAAAGGGTCAAGAACTGCAACGGACAAAA-CCATTAAAAAAATATGTACTGATTGTAATATCTATACGAAATCATTTAATGCAAATGCCGTAGATATTGCTTTTTGCAAACATCTTAAAAGTGCTAAAAAGGAAGTTGACTTCTCTGACTTTGTAAGATTTGTCGAAGGAGCAATGGCGGAAGAGTATGCAAAACAAAAAAATATATCGACAACTGACGCATCAAATGAAATAAAAAACAAAATAACCAACAGCTCTGGTCCTAAATCTCATGGAACTACTCAGGCTAGTAAAGATTCGGCGACATCCCGTCTTACTGATGTAAAAGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCAGGCTACGTTGGAGGCTATAAAGGAAAGGACACGTATGACAAAACCCACTAACAGTTATTTACTTTCTCGATGTTTACTTATTTTAGTTCTGATATATTATTAATTAATTTAATTCTTGTCATGATCACTAAATAAATGTCAT]

[+] EMBL CD161831             [TCGGAGACATTTCAAAAGTTGT TACAGTTTCTGCACATATCAAGTTTCGATTGTCAATTTTACTTCCCCTCAAAATAAACCGAACGTTTTTCTTCTGACACAACATGGGAGATCTGGAAAAAATATTTTACGACTTTTGTGATGCAGTCAAAAAAGGGTCAAGAACTGCAACGGACAAAA CCATTAAAAAAATATGTACTGATTGTAATATCTATACGAAATCATTTAATGCAAATGCCGTAGATATTGCTTTTTGCAAACATCTTAAAAGTGCTAAAAAGGAAGTTGACTTCTCTGACTTTGTAAGATTTGTCGAAGGAGCAATGGCGGAAGAGTATGCAAAACACAAAAATATATCGACAACTGACGCATCAAATGGAATAAAAAACAAAATAACCAACAGCTCTGGTCCTAAATCT                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD097936             [TCGGAGACATTTCAAAAGTTGT TACAGTTTCTGCACATATCAAGTTTCGATTGTCAATTTTACTTCCCCTCAAAATAAACCGAACGTTTTTCTTCTGACACAACATGGGAGATCTGGAAAAAATATTTTACGACTTTTGTGATGCAGTCAAAAAAGGGTCAAGAACTGCAACGGACAAAA CCATTAAAAAAATATGTACTGATTGTAATATCTATACGAAATCATTTAATGCAAATGCCGTAGATATTGCTTTTTGCAAACATCTTAAAAGTGCTAAAAAGGAAGTTGACTTCTCTGACTTTGTAAGATTTGTCGAAGGAGCAATGGCGGAAGAGTATGCAAAGCAAAAAAATATATCGACAACTGACGCATCAAATGAAATAAAAAACAAAATAACCAACAGCTCTGGTCCTAAATCTCATGGAACTACTCAGGCTAGTAAAGATTCGGCGACATCCCGTCTTACTGATGTCACAGGATACACAGGCTCTCATAAAGAACGTTT                                                                                                                                                                                                                    ]
[+] EMBL CD078260             [     GACATTTCAAAAGTTGT TACAGTTTCTGCACATATCAAGTTTCGATTGTCAATTTTACTTCCCCTCAAAATAAACCGAACGTTTTTCTTCTGACACAACATGGGAGATCTGGAAAAAATATTTTACGACTTTTGTGATGCAGTCAAAAAAGGGTCAAGAACTGCAACGGACAAAA CCATTAAAAAAATATGTACTGATTGTAATATCTATACGAAATCATTTAATGCAAATGCCGTAGATATTGCTTTTTGCAAACATCTTAAAAGTGCTAAAAAGGAAGTTGACTTCTCTGACTTTGTAAGATTTGTCGAAGGAGCAATGGCGGAAGAGTATGCAAAACAAAAAAATATATCGACAACTGACGCATCAAATGAAATAAAAAACAAAATAACCAACAGCTCTGGTCCTAAATCTCATGGAACTACTCAGGCTAGTAAAGATTCGGCGACATCCCGTCTTACTGATGTAAAAGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCAGGCTACGTTGGAGGCTATAAAGGAAAGGACACGTATGACAAAAC                                                                                                  ]
[+] EMBL CD078341             [     GACATTTCAAAAGTTGTNTACAGTTTCTGCACATATCAAGTTTCGATTGTCAATTTTACTTCCCCTCAAAATAAACCGAACGTTTTTCTTCTGACACAACATGGGAGATCTGGAAAAAATATTTTACGACTTTTGTGATGCAGTCAAAAAAGGGTCAAGAACTGCAACGGACAAAA CCATTAAAAAAATATGTACTGATTGTAATATCTATACGAAATCATTTAATGCAAATGCCGTAGATATTGCTTTTTGCAAACATCTTAAAAGTGCTAAAAAGGAAGTTGACTTCTCTGACTTTGTAAGATTTGTCGAAGGAGCAATGGCGGAAGAGTATGCAAAACAAAAAAATATATCGACAACTGACGCATCAAATGAAATAAAAAACAAAATAACCAACAGCTCTGGTCCTAAATCTCATGGAACTACTCAGGCTAGTAAAGATTCGGCGACATCCCGTCTTACTGATGTAAAAGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCA                                                                                                                                              ]
[+] EMBL CD163515             [                                                                                                                                                                          AACGGACAAAA CCATTAAAAAAATATGTACTGATTGTAATATCTATACGAAATCATTTAATGCAAATGCCGTAGATATTGCTTTTTGCAAACATCTTAAAAGTGCTAAAAAGGAAGTTGACTTCTCTGACTTTGTAAGATTTGTCGAAGGAGCAATGGCGGAAGAGTATGCAAAACAAAAAAATATATCGACAACTGACGCATCAAATGAAATAAAAAACAAAATAACCAACAGCTCTGGTCCTAAATCTCATGGAACTACTCAGGCTAGTAAAGATTCGGCGACATCCCGTCTTACTGATGTAAAAGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCA                                                                                                                                              ]
[-] EMBL CD163167             [                                                                                                                                                                           ACGGACAAAACCCATTAAAAAAATATGTACTGATTGTAATATCTATACGAAATCATTTAATGCAAATGCCGTAGATATTGCTTTTTGCAAACATCTTAAAAGTGCTAAAAAGGAAGTTGACTTCTCTGACTTTGTAAGATTTGTCGAAGGAGCAATGGCGGAAGAGTATGCAAAACAAAAAAATATATCGACAACTGACGCATCAAATGAAATAAAAAACAAAATAACCAACAGCTCTGGTCCTAAATCTCATGGAACTACTCAGGCTAGTAAAGATTCGGCGACATCCCGTCTTACTGATGTAAAAGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCAG                                                                                                                                             ]
[-] EMBL CD072899             [                                                                                                                                                                                        aaTAAAAAAATATGTACTGATGGTAATATCTATACGAAATCATTTAATGCAAATGCCGTAGATATTGCTTTTTGCAAACATCTTAAAAGTGCTAAAAAGGAAGTTGACTTCTCTGACTTTGTAAGATTTGTCGAAGGAGCAATGGCGGAAGAGTATGCAAAACAAAAAAATATATCGACAACTGACGCATCAAATGAAATAAAAAACAAAATAACCAACAGCTCTGGTCCTAAATCTCATGGAACTACTCAGGCTAGTAAAGATTCGGCGACATCCCGTCTTACTGATGTAAAAGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCAGGCTACGTTGGAGGCTATAAAGGAAAGGACACGTATGACAAAACCCACTAACAGTTATTTACTTTCTCGATGTTTACTTATTTTAGTTCTGATATATTATTAATTAATTTAATTCTTGTCATGATCACTAAATAAATGTCAT]
[+] EMBL CD192524             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGATGTAAAAGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCAGGCTACGTTGGAGGCTATAAAGGAAAGGACACGTATGACAAAACCCACTAACAGTTATTTAC                                                                                ]
[+] EMBL CD192792             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGATGTAAAAGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCAGGCTACGTTGGAGGCTATAAAGGAAAGGACACGTATGACAAAACCCACTAACAGTTATTTAC                                                                                ]
[+] EMBL CD134944             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGATGTAAAAGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCAGGCTACGTTGGAGGCTATAAAGGAAAGGACACGTATGACAAAACCCACTAACAGTTAT                                                                                    ]
[+] EMBL CD192173             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGATGTAAAGGGATACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGGGACGAGAGTATGTTATGGATGAAAAAGCAGCTTCAGGCTACGTTGGAGGCTATAAAGGAAAGGACACGTATGACAAAACCCACTAACAGTTA                                                                                     ]




>consensus_10624#1
TCGGAGACATTTCAAAAGTTGTTACAGTTTCTGCACATATCAAGTTTCGATTGTCAATTT
TACTTCCCCTCAAAATAAACCGAACGTTTTTCTTCTGACACAACATGGGAGATCTGGAAA
AAATATTTTACGACTTTTGTGATGCAGTCAAAAAAGGGTCAAGAACTGCAACGGACAAAA
CCATTAAAAAAATATGTACTGATTGTAATATCTATACGAAATCATTTAATGCAAATGCCG
TAGATATTGCTTTTTGCAAACATCTTAAAAGTGCTAAAAAGGAAGTTGACTTCTCTGACT
TTGTAAGATTTGTCGAAGGAGCAATGGCGGAAGAGTATGCAAAACAAAAAAATATATCGA
CAACTGACGCATCAAATGAAATAAAAAACAAAATAACCAACAGCTCTGGTCCTAAATCTC
ATGGAACTACTCAGGCTAGTAAAGATTCGGCGACATCCCGTCTTACTGATGTAAAAGGAT
ACACAGGCTCTCATAAAGAACGTTTTGATGCTGAAACCGGTAAAGGTAAAGGAATCGAGG
GACGAGAGTATGTTATGGATGAAAAAGCAGCTTCAGGCTACGTTGGAGGCTATAAAGGAA
AGGACACGTATGACAAAACCCACTAACAGTTATTTACTTTCTCGATGTTTACTTATTTTA
GTTCTGATATATTATTAATTAATTTAATTCTTGTCATGATCACTAAATAAATGTCAT

consensusID : consensus_10624#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 569
fasta sequence

                              [TAAATCGTATAATAACAGTCTATGAGTCAAAATAAAGCTTACAATTAGAGGGATACGACTATGGATACTGTAGTTACTTAGCAATTTTATAATAGGAAATATACATATTATATTAGTCCATAATTAGTCCTCAAAAGTTACCATTCATAAATCACTTTGGGATATAACAGTTTTCAATCTTTGTTCGAATTATGATCCAAAATTATCCATTCACAATCACTTAGCCATATTGAACAAAACACTTTGGTATAGAATAATAACAAACTGCCATTTTGACTAGTTGGTATGTAAGAGAAAACACAGTTTGTCAAAACTTTGTTATATATTTCTATGACTTATTAATGACCTAAATAAGCCAAATTTCTGTCAGCGTATTTATATTATAGAAAAGACCAGGGGTACCTTAATGAACTGATACAAAATGCCATCATATATCTATTCAAGCTTTTCTGCCATCAAATTTGATATTTTCAGATTATCAATTCGAAAAAAAGTAGGTGATTTACATTGAAATTGGTTGACATTTCTAACCAAATATAACTCATGTACATGTCAAAGTATATACATTG]

[+] EMBL CD075979             [TAAATCGTATAATAACAGTCTATGAGTCAAAATAAAGCTTACAATTAGAGGGATACGACTATGGATACTGTAGTTACTTAGCAATTTTATAATAGGAAATATACATATTATATTAGTCCATAATTAGTCCTCAAAAGTTACCATTCATAAATCACTTTGGGATATAACAGTTTTCAATCTTTGTTCGAATTATGATCCAAAATTATCCATTCACAATCACTTAGCCATATTGAACAAAACACTTTGGTATAGAATAATAACAAACTGCCATTTTGACTAGTTGGTATGTAAGAGAAAACACAGTTTGTCAAAACTTTGTTATATATTTCTATGACTTATTAATGACCTAAATAAGCCAAATTTCTGTCAGCGTATTTATATTATAGAAAAGACCAGGGGTACCTTAATGAACTGATACAAAATGCCATCATATATCTATTCAAGCTTTTCTGCCATCAAATTTGATATTTTCAGATTATCAATTCGAAAAAAAGTAGGTGATTTACATTGAAATTGGTTGACATTTCTAACCAAATATAACTCATGTACATGTCAAAGTATATACATTG]




>consensus_10624#2
TAAATCGTATAATAACAGTCTATGAGTCAAAATAAAGCTTACAATTAGAGGGATACGACT
ATGGATACTGTAGTTACTTAGCAATTTTATAATAGGAAATATACATATTATATTAGTCCA
TAATTAGTCCTCAAAAGTTACCATTCATAAATCACTTTGGGATATAACAGTTTTCAATCT
TTGTTCGAATTATGATCCAAAATTATCCATTCACAATCACTTAGCCATATTGAACAAAAC
ACTTTGGTATAGAATAATAACAAACTGCCATTTTGACTAGTTGGTATGTAAGAGAAAACA
CAGTTTGTCAAAACTTTGTTATATATTTCTATGACTTATTAATGACCTAAATAAGCCAAA
TTTCTGTCAGCGTATTTATATTATAGAAAAGACCAGGGGTACCTTAATGAACTGATACAA
AATGCCATCATATATCTATTCAAGCTTTTCTGCCATCAAATTTGATATTTTCAGATTATC
AATTCGAAAAAAAGTAGGTGATTTACATTGAAATTGGTTGACATTTCTAACCAAATATAA
CTCATGTACATGTCAAAGTATATACATTG

consensusID : consensus_10624#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 496
fasta sequence

                              [GACAATTGCTTATAACTCCCTATTGTTATTATTCCTATGGTATTGTTTACTTGAATCTTCCCATTGATGTTTAGGACTGCAATCCACCAGTCTCTTATTATAATATGTACATCCTGTGTGAACTGCCTCAACATTATATGCAAAAATGAACAGTGGTTAGCAGTGAAATCCAGATCACACGTTTCGTTCTATCTGGGACTTGTTAACTGGATATTGCTGAATCCTAGAGTTAGTGTTCACTCAGTACCTAGTTGGATAACATGATGGCATTTGAAGCGAATGGTACTGTGTTCGAGTCTCGGATTGGATATCAACTCTTGAATGCTGCTGGATCCAGGTGAAGAGTCTTGAATAGAATGAAACGCGCGTCCTAGATTCCATTGCTAGTCACTATCCATCTTTGCTTATTTTTATTATTATTTATCCCTCAATAAATTGAATATTGATCCTTAGTGTTTTTCGTATCTAACTGATAAAATCTTAGGATGTCAAACAG]

[+] EMBL CD088049             [GACAATTGCTTATAACTCCCTATTGTTATTATTCCTATGGTATTGTTTACTTGAATCTTCCCATTGATGTTTAGGACTGCAATCCACCAGTCTCTTATTATAATATGTACATCCTGTGTGAACTGCCTCAACATTATATGCAAAAATGAACAGTGGTTAGCAGTGAAATCCAGATCACACGTTTCGTTCTATCTGGGACTTGTTAACTGGATATTGCTGAATCCTAGAGTTAGTGTTCACTCAGTACCTAGTTGGATAACATGATGGCATTTGAAGCGAATGGTACTGTGTTCGAGTCTCGGATTGGATATCAACTCTTGAATGCTGCTGGATCCAGGTGAAGAGTCTTGAATAGAATGAAACGCGCGTCCTAGATTCCATTGCTAGTCACTATCCATCTTTGCTTATTTTTATTATTATTTATC                                                                       ]
[-] EMBL CD088080             [                                                                                                                 CTGTGTGAACTGCCTCAACATTATATGCAAAAATGAACAGTGGTTAGCAGTGAAATCCAGATCACACGTTTCGTTCTATCTGGGACTTGTTAACTGGATATAGCTGAATCCTAGAGTTAGTGTTCACTCAGTAGCTAGTTGGATAACATGATGGCATTTGAAGCGAATGGTACTGTGTTCGAGTCTCGGATTGGATATCAACTCTGGAATGCTGGTGGATCCAGGTGAAGAGTCTTGAATAGAATGAAACGCGCGTCCTAGATTCCATTGCTAGTCACTATCCATCTTTGCTTATTTTTATTATTATTTATCCCTCAATAAATTGAATATTGATCCTTAGTGTTTTTCGTATCTAACTGATAAAATCTTAGGATGTCAAACAG]




>consensus_10624#3
GACAATTGCTTATAACTCCCTATTGTTATTATTCCTATGGTATTGTTTACTTGAATCTTC
CCATTGATGTTTAGGACTGCAATCCACCAGTCTCTTATTATAATATGTACATCCTGTGTG
AACTGCCTCAACATTATATGCAAAAATGAACAGTGGTTAGCAGTGAAATCCAGATCACAC
GTTTCGTTCTATCTGGGACTTGTTAACTGGATATTGCTGAATCCTAGAGTTAGTGTTCAC
TCAGTACCTAGTTGGATAACATGATGGCATTTGAAGCGAATGGTACTGTGTTCGAGTCTC
GGATTGGATATCAACTCTTGAATGCTGCTGGATCCAGGTGAAGAGTCTTGAATAGAATGA
AACGCGCGTCCTAGATTCCATTGCTAGTCACTATCCATCTTTGCTTATTTTTATTATTAT
TTATCCCTCAATAAATTGAATATTGATCCTTAGTGTTTTTCGTATCTAACTGATAAAATC
TTAGGATGTCAAACAG

consensusID : consensus_10624#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 412
fasta sequence

                              [TATTAATTATGAATACAGTGATCTTAGTGACCTGAGGGCGTGACCACAGTGCCCAATGGACAACTTCTTGAGGCTGATCACACACGACCTTTTTGTGAGTAACTTTTGTGTTAGTTGCGTACTTGTTGGTACCTTACCATCGGAGACGGAAGTCCGTGGGATAAAGCGAGGTGTGCATTTTTACGGTCGGCCTTTTCTAACCTCACCCTTCCTAATGGGAAGGCAGCACCGCTGTCATGCTGGTTGTCTGAAAGAAACACCTTACTGCTGTCACACCTCTGTACAGTCAGCAGTAGGACTTCCCCCTTGGACCATGGGTTTGATGCTTTTAGTCTTACCGCTCTCCGACCGACCTGTCTGGCATGGTAGGACCTTGAGGAACAATTGTTCCAGCCAGCATAACTCGATCGGT]

[+] EMBL CD198630             [TATTAATTATGAATACAGTGATCTTAGTGACCTGAGGGCGTGACCACAGTGCCCAATGGACAACTTCTTGAGGCTGATCACACACGACCTTTTTGTGAGTAACTTTTGTGTTAGTTGCGTACTTGTTGGTACCTTACCATCGGAGACGGAAGTCCGTGGGATAAAGCGAGGTGTGCATTTTTACGGTCGGCCTTTTCTAACCTCACCCTTCCTAATGGGAAGGCAGCACCGCTGTCATGCTGGTTGTCTGAAAGAAACACCTTACTGCTGTCACACCTCTGTACAGTCAGCAGTAGGACTTCCCCCTTGGACCATGGGTTTGATGCTTTTAGTCTTACCGCTCTCCGACCGACCTGTCTGGCATGGTAGGACCTTGAGGAACAATTGTTCCAGCCAGCATAACTCGATCGGT]




>consensus_10624#4
TATTAATTATGAATACAGTGATCTTAGTGACCTGAGGGCGTGACCACAGTGCCCAATGGA
CAACTTCTTGAGGCTGATCACACACGACCTTTTTGTGAGTAACTTTTGTGTTAGTTGCGT
ACTTGTTGGTACCTTACCATCGGAGACGGAAGTCCGTGGGATAAAGCGAGGTGTGCATTT
TTACGGTCGGCCTTTTCTAACCTCACCCTTCCTAATGGGAAGGCAGCACCGCTGTCATGC
TGGTTGTCTGAAAGAAACACCTTACTGCTGTCACACCTCTGTACAGTCAGCAGTAGGACT
TCCCCCTTGGACCATGGGTTTGATGCTTTTAGTCTTACCGCTCTCCGACCGACCTGTCTG
GCATGGTAGGACCTTGAGGAACAATTGTTCCAGCCAGCATAACTCGATCGGT

consensusID : consensus_10624#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 409
fasta sequence

                              [CAGTGTGGTGTCTAACATATCGTCCATCCACCTAATTAATGTAGGTGATTGCGAAGATTTCTCCTTGTTTCACTGGGATGAAGTTTGATAAGGAGTTTCATGTTAAAATTTTTCACAACCGTCCATTTATTGTTGTTCAATGCGATCATATACCCTCGACCGTTCCTTTTATTTTGTTAATTATGGAGTGTCGGAAGATCAACGCACAGGGCTTCGCTTTAATCTAGGACTTGTTCCTTACATTTTCCAAGTTGAATTCCTCTTTACCGCCATCAATGTCCCGACCGTAGCTGCTACCAAGACGTGGTGATCGGGCTCGCCTATCGCGATGAACTAATCGAGCTATACTGGCTGGAACAATTGTTCTTCAAGGTCCTACCATGCCGGACAGGTCGGTTGAAGAGCGGTA]

[+] EMBL CD185048             [CAGTGTGGTGTCTAACATATCGTCCATCCACCTAATTAATGTAGGTGATTGCGAAGATTTCTCCTTGTTTCACTGGGATGAAGTTTGATAAGGAGTTTCATGTTAAAATTTTTCACAACCGTCCATTTATTGTTGTTCAATGCGATCATATACCCTCGACCGTTCCTTTTATTTTGTTAATTATGGAGTGTCGGAAGATCAACGCACAGGGCTTCGCTTTAATCTAGGACTTGTTCCTTACATTTTCCAAGTTGAATTCCTCTTTACCGCCATCAATGTCCCGACCGTAGCTGCTACCAAGACGTGGTGATCGGGCTCGCCTATCGCGATGAACTAATCGAGCTATACTGGCTGGAACAATTGTTCTTCAAGGTCCTACCATGCCGGACAGGTCGGTTGAAGAGCGGTA]




>consensus_10624#5
CAGTGTGGTGTCTAACATATCGTCCATCCACCTAATTAATGTAGGTGATTGCGAAGATTT
CTCCTTGTTTCACTGGGATGAAGTTTGATAAGGAGTTTCATGTTAAAATTTTTCACAACC
GTCCATTTATTGTTGTTCAATGCGATCATATACCCTCGACCGTTCCTTTTATTTTGTTAA
TTATGGAGTGTCGGAAGATCAACGCACAGGGCTTCGCTTTAATCTAGGACTTGTTCCTTA
CATTTTCCAAGTTGAATTCCTCTTTACCGCCATCAATGTCCCGACCGTAGCTGCTACCAA
GACGTGGTGATCGGGCTCGCCTATCGCGATGAACTAATCGAGCTATACTGGCTGGAACAA
TTGTTCTTCAAGGTCCTACCATGCCGGACAGGTCGGTTGAAGAGCGGTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10624#0      GCATGAGAACAAAGTCAAATGATTTGTATAGAAGAAGAAGAACACGAAGACGACGAATGA 60
consensus_10624#1      ---TCGGAGACATTTCAAA-AGTTGTTACAGTTTCTGCACA-TATCAAGTTT-CGATTGT 54
consensus_10624#2      ------------------------------------------------------------
consensus_10624#4      ------------------------------------------------------------
consensus_10624#3      ------------------------------------------------------------
consensus_10624#5      ------------------------------------------------------------
                                                                                   

consensus_10624#0      GAAGTGATAATAGCAAGAAAGGCGCATCGATTTTTACTTCTCTTTTATAAAATATTCAAG 120
consensus_10624#1      CAA-TTTTACTTCCCCTCAAAATAAACCGAACGTT--TTTCTTCTGACACAACATGGGAG 111
consensus_10624#2      ------------------------------------------------------------
consensus_10624#4      ------------------------------------------------------------
consensus_10624#3      ------------------------------------------------------------
consensus_10624#5      ------------------------------------------------------------
                                                                                   

consensus_10624#0      AATATAAGCCTAATTAATTGGACATGTTTGGGGGGGGGGTAGAAGATGATTAACAGT--- 177
consensus_10624#1      ATCTGGAAA--AAATATTTTACGACTTTTGTGATGCAGTCAAAAAAGGGTCAAGAACTGC 169
consensus_10624#2      ------------------------------TAAATCGTATAATAACAGTCTATGAGTCAA 30
consensus_10624#4      --------------------------------------------------TATTAATTAT 10
consensus_10624#3      ------------------------------------------------------------
consensus_10624#5      ------------------------------------------------------------
                                                                                   

consensus_10624#0      -GCATAATATATCAGTGTATAAATACG-AT-TGGATATAAG---TATACAAATCTTGTTC 231
consensus_10624#1      AACGGACAAAACCATTAAAAAAATATGTAC-TGATTGTAATATCTATACGAAA-TCATTT 227
consensus_10624#2      AATAAAGCTTACAATTAGAGGGATACGACTATGGATACTGTAGTTACTTAGCAATTTTAT 90
consensus_10624#4      GA-ATACAGTGATCTTAGTGACCTGAGGGCGTGACCACAGTGCCCAATGGACAACTTCTT 69
consensus_10624#3      -------------------------------------------------GACAATTGCTT 11
consensus_10624#5      --------------------CAGTGTGGTGTCTAACATATCGTCCATCCACCTAATTAAT 40
                                                                                   

consensus_10624#0      ATTATGTACTTCTTTTTT-TTGTTT-TGATCACAGAGC---AAGATGAAATGATTCAAGT 286
consensus_10624#1      AATGCAAATGCCGTAGATATTGCTT-TTTGCAAACATCTTAAAAGTGCTAAAAAGGAAGT 286
consensus_10624#2      AATAGGAAATATACATATTATATTAGTCCATAATTAGTCCTCAAAAGTTACCATTCATAA 150
consensus_10624#4      GAGGCTGATCACACACGACCTTTTTGTGAGTAACTTTT------GTGTTA-GTTGCGTAC 122
consensus_10624#3      ATAACTCCCTATTGTTATTATTCCTATG-GTATTGTTTACTTGAATCTTCCCATTGATGT 70
consensus_10624#5      GTAGGTGATTGCGAAGATTTCTCCTTGTTTCACTGGGA--TGAAGTTTGATAAGGAGTTT 98
                                                      *                            

consensus_10624#0      CAAATTGTAGAATATGAATAATGGTCATTAGGATCTGTACAGTTTGGTCAAAAAAGACA- 345
consensus_10624#1      TGACTTCTCTGACTTTG-TAAGATTTGTCGAAG---GAGCAATGGCGGAAGAGTATGCA- 341
consensus_10624#2      ATCACTTTGGGATATAACAGTTTTCAATCTTTGTTCGAATTATGATCCAAAATTATCCAT 210
consensus_10624#4      T---TGTTGGTACCTTACCATCGGAGACGGAAGTCCGTGGGATAAAGCGAGG-TGTGCAT 178
consensus_10624#3      TTAGGACTGCAATCCACCAGTCTCTTATTATAATATGTACATCCTGTGTGAACTGCCTC- 129
consensus_10624#5      CATGTTAAAATTTTTCACAACCGTCCATTTATTGTTGTTCAATGCGATCATA-TACCCTC 157
                                                           *                       

consensus_10624#0      ----AAACAAATAAAAAT--CAAAAAAAAATACTTAAGATAAGA-----GAACTTTTTAT 394
consensus_10624#1      ----AAACAAAAAAATATATCGACAACTGACGCATCAAATGAAATAA-AAAACAAAATAA 396
consensus_10624#2      TCACAATCACTTAGCCATATTGA-ACAAAACACTTTGGTATAGAATA-ATAACAAACTG- 267
consensus_10624#4      TT--TTACGGTCGGCCTTTTCTA-ACCTCACCCTTCCTAATGGGAAG-GCAGCACCGCTG 234
consensus_10624#3      -----AACA-TTATATGCAAAAATGAACAGTGGTTAGCAGTGAAATCCAGATCACACGTT 183
consensus_10624#5      GACCGTTCCTTTTATTTTGTTAATTATGGAGTGTCGGAAGATCAACGCACAGGGCTTCGC 217
                              *              *                           *         

consensus_10624#0      CCCATAACAGTAGTAATATTGCTAATGGTAATAAT---ACGCTTATATATATCCATTCAT 451
consensus_10624#1      CCAACAGCTCTGGTCCTAAATCTCATGGAACTACTC--AGGCTAGTAAAGATTCGGCGAC 454
consensus_10624#2      CCATTTTGACTAGTTGGTATGTAAGAGAAAACACA-----GTTTGTCAAAACTTTGTTAT 322
consensus_10624#4      TCATGCTGGTTGTCTGAAAGAAACACCTTACTGCTGTCACACCTCTGTACAGTCAGCAGT 294
consensus_10624#3      TCGTTCTATCTGGGACTTGTTAACTGGATATTGCTGAATCCTAGAGTTAGTGTTCACTCA 243
consensus_10624#5      TTTAATCTAGGACTTGTTCCTTACATTTTCCAAGTTGAATTCCTCTTTACCGCCATCAAT 277
                                                                       *           

consensus_10624#0      AAGCATATT-TCGCTTATATGAAGTAATTTGCATTACCAACAATGTAAATCATAATTAGG 510
consensus_10624#1      AT-CCCGTC-TTACTGATGTAAAAGGAT--------------ACACAGGCTCTCATAAAG 498
consensus_10624#2      ATATTTCTA-TGACTTAT-TAATGACCTA---------AATAAGCCAAATTTCTGTCAGC 371
consensus_10624#4      AGGACT-TC-CCCCTTGGACCATGGGTTT---GATGCTTTTAGTCTTACCGCTCTCCGAC 349
consensus_10624#3      GTACCTAGT-TGGATAACATGATGGCATT-----------TGAAGCGAATGGTACTGTGT 291
consensus_10624#5      GTCCCGACCGTAGCTGCTACCAAGACGTGG-------TGATCGGGCTCGCCTATCGCGAT 330
                                     *      *     *                                

consensus_10624#0      AAAGTTTTCTTCTATTGAATAGTTTTTTGTATACGTTCAATCCATTGCATAGCAC-TCTC 569
consensus_10624#1      AACGTTTTGATGC-TGAAACCGGTAAAGGTAAAGG---AATCGAGGGACGAGAGTATGTT 554
consensus_10624#2      GTATTTATATTAT-AGAAAAGACCAGGGGTACCTT---AATGAACTG-ATACAAAATGCC 426
consensus_10624#4      CGACCTGTCTGGCATGGTAGGACCTTGAGGAAC-----AATT-GTTCCAGCCAGCATAAC 403
consensus_10624#3      TCGAGTCTCGGATTGGATATCAACTCTTGAATGCT---GCTGGATCCAGGTGAAGAGTCT 348
consensus_10624#5      GAACTAATCGAGC--TATACTGGCTGGAACAATTGTTCTTCAAGGTCCTACCATGCCGGA 388
                              *          *           *                             

consensus_10624#0      TTGATTGATAGCACCGAGTTTG--TATGTTCGATTAT-TAGTTTCAAGTTCAAATACAAC 626
consensus_10624#1      ATGGATGAAAAAGCAGCTTCAGGCTACGTTGGAGGCTATAAAGGAAAGGACACGTATGAC 614
consensus_10624#2      ATCATATATCTATTCAAGCTT-------TTCTGCCATCAAATTTGATATTTTCAGATTAT 479
consensus_10624#4      TCGATCGGT--------------------------------------------------- 412
consensus_10624#3      TGAATAGAATGAAACGCGCGTC-CTAGATTCCATTGC--TAGTCACTATCCATCTTTGCT 405
consensus_10624#5      CAGGTCGGTTGAAGAGCGGTA--------------------------------------- 409
                                                                                   

consensus_10624#0      AAATGAAGGTGATTTTCGTTGAATTGCAAAATTTTTAATAATTCTCACTGTTCTAACATC 686
consensus_10624#1      AAAACCCACTAACAGTTATTTACTTTCTCGATGTTTACTTATTTT---AGTTCTGATATA 671
consensus_10624#2      CAATTCGAAAAAAAGTAGGTGATTTACATTGAAATTGGTTGACAT-----TTCTAACCAA 534
consensus_10624#4      ------------------------------------------------------------
consensus_10624#3      TATTTTTATTATTATTTATCCCTCAATAAATTGAATATTGATCCTTAGTGTTTT--TCGT 463
consensus_10624#5      ------------------------------------------------------------
                                                                                   

consensus_10624#0      TTGTAAATCA-ATACAACCACGAGGTGAAGCATTAGCATAACTTTCATAATATTTTAATT 745
consensus_10624#1      TTATTAATTA-ATTTAATTCTTGTCATGATCACTAA-ATAAATGTCAT------------ 717
consensus_10624#2      ATATAACTCATGTACATGTCAAAGTATATACATTG------------------------- 569
consensus_10624#4      ------------------------------------------------------------
consensus_10624#3      ATCTAACTGATAAAATCTTAGGATGTCAAACAG--------------------------- 496
consensus_10624#5      ------------------------------------------------------------
                                                                                   

consensus_10624#0      GATGTCGATTTGTATCCAAAGCGAATAAACGTTGTTTCCATTGTTGTAAAAATTTACGAT 805
consensus_10624#1      ------------------------------------------------------------
consensus_10624#2      ------------------------------------------------------------
consensus_10624#4      ------------------------------------------------------------
consensus_10624#3      ------------------------------------------------------------
consensus_10624#5      ------------------------------------------------------------
                                                                                   

consensus_10624#0      GACCTAATTTATATAAATAATCATAATATGATGCTGAAGCTAAATGTTCCGGCAAATGAT 865
consensus_10624#1      ------------------------------------------------------------
consensus_10624#2      ------------------------------------------------------------
consensus_10624#4      ------------------------------------------------------------
consensus_10624#3      ------------------------------------------------------------
consensus_10624#5      ------------------------------------------------------------
                                                                                   

consensus_10624#0      GTTCAATAGTAGTACCACCACCACCACCGGATAGACTTTGACCACTTTGTGATTGACAAT 925
consensus_10624#1      ------------------------------------------------------------
consensus_10624#2      ------------------------------------------------------------
consensus_10624#4      ------------------------------------------------------------
consensus_10624#3      ------------------------------------------------------------
consensus_10624#5      ------------------------------------------------------------
                                                                                   

consensus_10624#0      CAGATGTGTTAGTATGTGCTAACGATGAAGAACTNTCACTTAGTTTACGTTTTCC 980
consensus_10624#1      -------------------------------------------------------
consensus_10624#2      -------------------------------------------------------
consensus_10624#4      -------------------------------------------------------
consensus_10624#3      -------------------------------------------------------
consensus_10624#5      -------------------------------------------------------