cluster # 10631

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Schistosoma mansoni
cluster # 10631 cluster # 10631 Sequences # 19 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10631#0 length = 1005 sequences # 10
consensus_10631#1 length = 549 sequences # 4

consensus_10631#2 length = 450 sequences # 1
consensus_10631#3 length = 335 sequences # 1
consensus_10631#4 length = 290 sequences # 3

consensusID : consensus_10631#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1005
fasta sequence

                              [TATTTACGTCACCTGAGTAAGACGACAACCATACACTCTTTGAAGGATCATGGACGACAAAATCCAACATAAAATGGAAGTCGACTATTCCGTTAGCGTTGATAACTTACTCGTAACAGTGAAGTCTCTATTAGCGGCTGGAAATTTTGAGTCTGCTGTAG-AACAGTGTGTTTCTCTCGAAAAGCAAACAAGAACGGCTTCTGATGCAATATCTACAGGGCGACTGCTGGAGGCAATTGTCGAGATTTTAGCTGAAAGTTCTCAGTGGTCACGACTTAATGAGCATCTCATTTTAATGACAAAAAAGCACGGTCAA-ATGAAGCAGTCTGTATCCAAGATGGTTCAAAAAGCTATGGAGTATCTTGATAAAACACCGAGTGAACCGGTTAAACTCGAGTTAATCGAAGCTCTTAGGAATGTCACAGAAGGAAAAATTTATGTCGAAACTGAAAGAGCACGTTTGACAAAGGAATTGGCACGAATCAAAGAATCTCATGGAGATATTGAAGGGGCTGCTGCAGTGTTACAGGATCTCCAAGTCGAAACATTTGGTTCTATGGAAAAGAAGGAAAAAGTGGAATTCATGTTGGAACAGATGAGGCTTTGTTTGGCTAAAAAGGACTTTATCCGCACTCAAATCATAAGCAATAAAATATCAACTAAGTTCTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTAATGATCAACTTAAATGCTCATGATTCTCTCTACTTAAATATTAGCAAAAATTACTGGGAGATATACAATTCTAAAAGTGTACAAGAACATGAACTCTGAAAATTCTTAAGGGACAATCGTACTTTTGATATTTTAACACCACGATAGCCTAAAAATAGCTTCTGGTTTGTAAAGCGATTACCAAATGTTATTACAGAACGAATATTAGAAATTTTGGGACTTTGGAGCTCTTTTTGTGGNTATTATCATTATTGTTTTGTATTTTCACTGTTTTATTAGATACCTATTAT]

[+] EMBL AI977639             [TATTTACGTCACCTGAGTAAGACGACAACCATACACTCTTTGAAGGATCATGGACGACAAAATCCAACATAAAATGGAAGTCGACTATTCCGTTAGCGTTGATAACTTACTCGTAACAGTGAAGTCTCTATTAGCGGCTGGAAATTTTGAGTCTGCTGTAG AACAGTGTGTTTCTCTCGAAAAGCAAACAAGAACGGCTTCTGATGCAATATCTACAGGGCGACTGCTGGAGGCAATTGTCGAGATTTTAGCTGAAAGTTCTCAGTGGTCACGACTTAATGAGCATCTCATTTTAATGACAAAAAAGCACGGTCAA ATGAAGCAGTCTGTATCCAAGATGGTTCAAAAAGCTATGGAGTATCTTGATAAAACACCGAGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD179758             [                          AACCATACACTCTTTGAAGGATCATGGACGACAAAATCCAACATAAAATGGAAGTCGACTATTCCGTTAGCGTTGATAACTTACTCGTAACAGTGAAGTCTCTATTAGCGGCTGGAAATTTTGAGTCTGCTGTAG AACAGTGTGTTTCTCTCGAAAAGCAAACAAGAACGGCTTCTGATGCAATATCTACAGGGCGACTGCTGGAGGCAATTGTCGAGATTTTAGCTGAAAGTTCTCAGTGGTCACGACTTAATGAGCATCTCATTTTAATGAC AAAAAGCACGGTCAA ATGAAGCAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD161804             [                         ctACCATACACTCTTTGAAGGATCATGGACGACAAAATCCAACATAAAATGGAAGTCGACTATTCCGTTAGCGTTGATAACTTACTCGTAACAGTGAAGTCTCTATTAGCGGCTGGAAATTTTGAGTCTGCTGTAG AACAGTGTGTTTCTCTCGAAAAGCAAACAAGAACGGCTTCTGATGCAATATCTACAGGGCGACTGCTGGAGGCAATTGTCGAGATTTTAGCTGAAAGTTCTCAGTGGTCACGACTTAATGAGCATCTCATTTTAATGACAAAAAAGCACGGTCAA ATGAAGCAGTCTGTATCCAAGATGGTTCAAAAAGCTATGGAGTATCTTGATAAAACACCGAGTGAACCGGTTAAACTCGAGTTAATCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD179704             [                           ACCATACACTCTTTGAAGGATCATGGACGACAAAATCCAACATAAAATGGAAGTCGACTATTCCGTTAGCGTTGATAACTTACTCGTAACAGTGAAGTCTCTATTAGCGGCTGGAAATTTTGAGTCTGCTGTAGNAACAGTGTGTTTCTCTCGAAAAGCAAACAAGAACGGCTTCTGATGCAATATCTACAGGGCGACTGCTGGAGGCAATTGTCGAGATTTTAGCTGAAAGTTCTCAGTGGTCACGACTTAATGAGCATCTCATTTTAATGACAAAAAAGCACGGTCAATATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD116356             [                                                                                                                                                             GTAG AACAGTGTGTTTCTCTCGAAAAGCAAACAAGAACGGCTTCTGATGCAATATCTACAGGGCGACTGCTGGAGGCAATTGTCGAGATTTTAGCTGAAAGTTCTCAGTGGTCACGACTTAATGAGCATCTCATTTTAATGACAAAAAAGCACGGTCAA ATGAAGCAGTCTGTATCCAAGATGGTTCAAAGAGCTATGGAGTATCTTGATAAAACACCGAGTGAACCGGTTAAACTCGAGTTAATCGAAGCTCTTAGGAATGTCACAGAAGGAAAAATTTATGTCGAAACTGAAAGAGCACGTTTGACAAAGGAATTGGCACGAATCAAAGAATCTCATGGAGATATTGAAGGGGCTGCTGCAGTGTTACAGGATCTCCAAGTCGAAACATTTGGTTCTATGGAAAAGAAGGAAAAAGTGGAATTCATGTTGGAACAGATGAGGCTTTGTTTGGCTAAAAAG                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD096207             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CACGTTTGACAAAGGAATTGGCACGAATCAAAGAATCTCATGGAGATATTGAAGGGGCTGCTGCAGTGTTACAGGATCTCCAAGTCGAAACATTTGGTTCTATGGAAAAGAAGGAAAAAGTGGAATTCATGTTGGAACAGATGAGGCTTTGTTTGGCTAAAAAGGACTTTATCCGCACTCAAATCATAAGCAATAAAATATCAACTAAGTTCTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTAATGATCAACTTAAATGCTCATGATTCTCTCTACTTAAATATTAGCAAAAATTACTGGGAGATATACAATTCTAAAAGTGTACAAGAACATGAACTCTGAAAATTCTTAAGGGACAATCGTACTTTTGATATTTTAACACCACGATAGCCTAAAAATAGCTTCTGGTTTGTAAAGCGATTACCAAATGTTATTACAGAACGAATATTAGAAATTTTGGGACTTTGGAGCTCTTTTTGTGGNTATTATCATTATTGTTTTGTATTTTCACTGTTTTATTAGATACCTATTAT]
[+] EMBL CD131724             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAAAGAATCTCATGGAGATATTGAAGGGGCTGCTGCAGTGTTACAGGATCTCCAAGTCGAAACATTTGGTTCTATGGAAAAGAAGGAAAAAGTGGAATTCATGTTGGAACAGATGAGGCTTTGTTTGGCTAAAAAGGACTTTATCCGCACTCAAATCATAAGCAATAAAATATCAACTAAGTTCTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTAATGATCAACTTAAATGCTCATGATTCTCTCTACTT                                                                                                                                                                                                                                                               ]
[-] EMBL CD185157             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     aAAAGAATCTCATGGAGATATTGAAGGGGCTGCTGCAGTGTTACAGGATCTCCAAGTCGAAACATTTGGTTCTATGGAAAAGAAGGAAAAAGTGGAATTCATGTTGGAACAGATGAGGCTTTGTTTGGCTAAAAAGGACTTTATCCGCACTCAAATCATAAGCAATAAAATCTCAACTAAGTTCTTTGCTGACGTAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTCATGATCAACTTAAATGCTCATGATTCTCTCTACTTA                                                                                                                                                                                                                                                              ]
[+] EMBL CD131380             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAAGAATCTCATGGAGATATTGAAGGGGCTGCTGCAGTGTTACAGGATCTCCAAGTCGAAACATTTGGTTCTATGGAAAAGAAGGAAAAAGTGGAATTCATGTTGGAACAGATGAGGCTTTGTTCGGCTAAAAAGGACTTTATCCGCACTCAAATCATAAGCAATAAAATATCAACTAAGTTCTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTAATGATCAACTTAAATGCTCATGATTCTCTCTACTT                                                                                                                                                                                                                                                               ]
[-] EMBL CD185575             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGAATCTCATGGAGATATTGAAGGGGCTGCTGCAGTGTTACAGGATCTCCAAGTCGAAACATTTGGTTCTATGGAAAAGAAGGAAAAAGTGGAATTCATGTTGGAACAGATGAGGCTTTGTCTGGCTAAAAAGGACTTTATCCGCACTCAAATCATAAGCAATAAAATATCAACTAAGTTCTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTAATGATCAACTTAAATGCTCATGATTCTCTCTACTTA                                                                                                                                                                                                                                                              ]




>consensus_10631#0
TATTTACGTCACCTGAGTAAGACGACAACCATACACTCTTTGAAGGATCATGGACGACAA
AATCCAACATAAAATGGAAGTCGACTATTCCGTTAGCGTTGATAACTTACTCGTAACAGT
GAAGTCTCTATTAGCGGCTGGAAATTTTGAGTCTGCTGTAGAACAGTGTGTTTCTCTCGA
AAAGCAAACAAGAACGGCTTCTGATGCAATATCTACAGGGCGACTGCTGGAGGCAATTGT
CGAGATTTTAGCTGAAAGTTCTCAGTGGTCACGACTTAATGAGCATCTCATTTTAATGAC
AAAAAAGCACGGTCAAATGAAGCAGTCTGTATCCAAGATGGTTCAAAAAGCTATGGAGTA
TCTTGATAAAACACCGAGTGAACCGGTTAAACTCGAGTTAATCGAAGCTCTTAGGAATGT
CACAGAAGGAAAAATTTATGTCGAAACTGAAAGAGCACGTTTGACAAAGGAATTGGCACG
AATCAAAGAATCTCATGGAGATATTGAAGGGGCTGCTGCAGTGTTACAGGATCTCCAAGT
CGAAACATTTGGTTCTATGGAAAAGAAGGAAAAAGTGGAATTCATGTTGGAACAGATGAG
GCTTTGTTTGGCTAAAAAGGACTTTATCCGCACTCAAATCATAAGCAATAAAATATCAAC
TAAGTTCTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTAATGAT
CAACTTAAATGCTCATGATTCTCTCTACTTAAATATTAGCAAAAATTACTGGGAGATATA
CAATTCTAAAAGTGTACAAGAACATGAACTCTGAAAATTCTTAAGGGACAATCGTACTTT
TGATATTTTAACACCACGATAGCCTAAAAATAGCTTCTGGTTTGTAAAGCGATTACCAAA
TGTTATTACAGAACGAATATTAGAAATTTTGGGACTTTGGAGCTCTTTTTGTGGNTATTA
TCATTATTGTTTTGTATTTTCACTGTTTTATTAGATACCTATTAT

consensusID : consensus_10631#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 549
fasta sequence

                              [GGGCTTTATCCGCACTCGAATCATAAGCAATAAAATATCAACTAAGTTCTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTAATGATCAACTTAAATGCTCATGATTCTCTCTACTTAAATATTAGCAAAAATTACTGGGAGATATACAATTCTAAAAGTGTACAAGAAGATGAACAAAAGCGGTTGCTAGTACTCAGGCAATTGTCGAGATTTTAGCTGAAAGTTCTCAGTGGTCACGACTTAATGAGCATCTCATTTTAATGACAAAAAAGCACGGTCAAATGAAGCAGTCTGTATCCAAGATGGTTCAAAAAGCTATGGAGTATCTTGATAAAACACCGAGTGAACCGGTCAAACTCGAGTTAATCGAAGCTCTTAGGAATGTCACAGAAGGAA-AAA-TTATGTCGAAACTGAAAGAGCACGTTTGACAAAGGAATTGGCACGAATCANAGAATCTCATGGAGATATTGAAGGGGCTGCTGCAGTGTTACAGGATCTCCAAGTCGAAACATTTGGTTCTATGGAAAANAAAA]

[+] EMBL CD131489             [GGGCTTTATCCGCACTCGAATCATAAGCAATAAAATATCAACTAAGTTCTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTAATGATCAACTTAAATGCTCATGATTCTCTCTACTTAAATATTAGCAAAAATTACTGGGAGATATACAATTCTAAAAGTGTACAAGAAGATGAACAAAAGCGGTTGCTAGTACTCAGGCAATTGTCGAGATTTTAGCTGAAAGTTCTCAGTGGTCACGACTTAATGAGCATCTCATTTTAATGACAAAAAAGCACGGTCAAATGAAGCAGTCTGTATCCAAGATGGTTCAAAAAGCTATGGAGTATCTTGATAAAACACCGAGTGAACCGGTCAAACTCGAGTTAATCGAAGCTCTTAGGAATGTCACAGAAGGAA AAA TTATGTCGAAACTGAAAGAGCACGTTTGACAAAGGAATTGGCACGAATCANAGAATCTCATGGAGATATTGAAGGGGCTGCTGCAGTGTTACAGGATCTCCAAGTCGAAACATTTGGTTCTATGGAAAANAAAA]
[+] EMBL CD131305             [GGACTTTATCCGCACTCAAATCATAAGCAATAAAATATCAACTAAGTTCTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTAATGATCAACTTAAATGCTCATGATTCTCTCTACTTAAATATTAGCAAAAATTACTGGGAGATATACAATTCTAAAAGTGTACAAGAAGATGAACAAAAGCGGTTGCTAGTACTCAGGCAATTGTCGAGATTTTAGCTGAAAGTTCTCAGTGGTCACGACTTAATGAGCATCTCATTTTAATGACAAAAAAGCACGGTCAAATGAAGCAGTCTGTATCCAAGATGGTTCAAAAAGCTATGGAGTATCTTGATAAAACACCGAGTGAACCGGTTAAACTCGAGTTAATCGAAGCTCTTAGGAATGTCACAGAGGGAA AAATTTATGTCGAAACTGAAAGAGCACGTTTGACAAAGGAATTGGCACGAATCAAAGAATCTCATGGAGATATTGAAGGGGCTGCTGCAGTGTTACAGGATCTCCAAGTCGAAACATTTGGTTCTATGCAAAAAAA  ]
[+] EMBL CD131683             [GGACTTTATCCGCACTCAAATCATAAGCAATAAAATATCAACTAAGTTCTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTAATGATCAACTTAAATGCTCATGATTCTCTCTACTTAAATATTAGCAAAAATTACTGGGAGATATACAATTCCAAAAGTGTACAAGAAGATGAACAAAAGCGGTTGCTAGTACTCAGGCAATTGTCGAGATTTTAGCTGAAAGTTCTCAGTGGTCACGACTTAATGAGCATCTCATTTTAATGACAAAAAAGCACGGTCAAATGAAGCAGTCTGTATCCAAGATGGTTCAAAAAGCTATGGAGTATCTTGATAAAACACCGAGTGAACCGGTTAAACTCGAGTTAATCGAAGCTCTTAGGAATGTCACAGAAGGAAGAAT TTATGTCGAAACTGAAAGAGCACGTTTGACAAAGGAATTGGCACGAATCANAGAATCTCATGGAGATATTGAAGGGGCTGCTGCAGTGTTACAGGATCTCCAAGTCGAAACATTTGGTTCTATGGAA       ]
[+] EMBL CD131662             [GGGCTTTATCCGCACTCGAATCATAAGCAATAAAATATCAACTAAGTTCTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTAATGATCAACTTAAATGCTCATGATTCTCTCTACTTAAATATTAGCAAAAATTACTGGGAGATATACAATTCTAAAAGTGTACAAGAAGATGAACAAAAGCGGTTGCTAGTACTCAGGCAATTGTCGAGATTTTAGCTGAAAGTTCTCAGTGGTCACGACTTAATGAGCATCTCATTTTAATGACAAAAAAGCACGGTCAAATGAAGCAGTCTGTATCCAAGATGGTTCAAAAAGCTATGGAGTATCTTGATAAAACACCGAGTGAACCGGTCAAACTCGAGTTAATCGAAGCTCTTAGGAATGTCACAGAAGGAA AAA TTATGTCGAAACTGAAAGAGCACGTTTGACAAAGGAATTGGCACGAATCAAAGAATCTCATGGAGATATTGAAGGGGCTGCTGCAGTGTTACAGGATCTCCAAGTCGAAACATT                    ]




>consensus_10631#1
GGGCTTTATCCGCACTCGAATCATAAGCAATAAAATATCAACTAAGTTCTTTGCTGATGC
AGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTAATGATCAACTTAAATGCTCATGA
TTCTCTCTACTTAAATATTAGCAAAAATTACTGGGAGATATACAATTCTAAAAGTGTACA
AGAAGATGAACAAAAGCGGTTGCTAGTACTCAGGCAATTGTCGAGATTTTAGCTGAAAGT
TCTCAGTGGTCACGACTTAATGAGCATCTCATTTTAATGACAAAAAAGCACGGTCAAATG
AAGCAGTCTGTATCCAAGATGGTTCAAAAAGCTATGGAGTATCTTGATAAAACACCGAGT
GAACCGGTCAAACTCGAGTTAATCGAAGCTCTTAGGAATGTCACAGAAGGAAAAATTATG
TCGAAACTGAAAGAGCACGTTTGACAAAGGAATTGGCACGAATCANAGAATCTCATGGAG
ATATTGAAGGGGCTGCTGCAGTGTTACAGGATCTCCAAGTCGAAACATTTGGTTCTATGG
AAAANAAAA

consensusID : consensus_10631#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 450
fasta sequence

                              [GGCTAAAAAGGACTTTATCCGCACTCAAACAGAACAGTGTGTTTCTCTCGAAAAACAAACAAGAACGGCTTCTGATGCAATATCTACAGGGCGACTGCTGGAGGCAATTGTCGAGATTTTAGCTGAAAGTTCTCAGTGGTCACGACTTAATGAGCATCTCATTTTAATGACAAAAAAGCACGGTCAAATGAAGCAGTCTGTATCCAAGATGGTTCAAAAAGCTATGGAGTATCTTGATAAAACACCGAGTGAACCGGTTAAACTCGAGTTAATCGAAGCTCTTAGGAATGTCACAGAAGGAAAAATTTATGTCGAAACTGAAAGAGCACGTTTGACAAAGGAATTGGCACGAATCAAAGAATCTCATGGAGATATTGAAGGGGCTGCTGCAGTGTTACAGGATCTCCAAGTCGAAACATTTGGTTCTATGGAAAAGAAGGAAAACGTGGA]

[+] EMBL CD184725             [GGCTAAAAAGGACTTTATCCGCACTCAAACAGAACAGTGTGTTTCTCTCGAAAAACAAACAAGAACGGCTTCTGATGCAATATCTACAGGGCGACTGCTGGAGGCAATTGTCGAGATTTTAGCTGAAAGTTCTCAGTGGTCACGACTTAATGAGCATCTCATTTTAATGACAAAAAAGCACGGTCAAATGAAGCAGTCTGTATCCAAGATGGTTCAAAAAGCTATGGAGTATCTTGATAAAACACCGAGTGAACCGGTTAAACTCGAGTTAATCGAAGCTCTTAGGAATGTCACAGAAGGAAAAATTTATGTCGAAACTGAAAGAGCACGTTTGACAAAGGAATTGGCACGAATCAAAGAATCTCATGGAGATATTGAAGGGGCTGCTGCAGTGTTACAGGATCTCCAAGTCGAAACATTTGGTTCTATGGAAAAGAAGGAAAACGTGGA]




>consensus_10631#2
GGCTAAAAAGGACTTTATCCGCACTCAAACAGAACAGTGTGTTTCTCTCGAAAAACAAAC
AAGAACGGCTTCTGATGCAATATCTACAGGGCGACTGCTGGAGGCAATTGTCGAGATTTT
AGCTGAAAGTTCTCAGTGGTCACGACTTAATGAGCATCTCATTTTAATGACAAAAAAGCA
CGGTCAAATGAAGCAGTCTGTATCCAAGATGGTTCAAAAAGCTATGGAGTATCTTGATAA
AACACCGAGTGAACCGGTTAAACTCGAGTTAATCGAAGCTCTTAGGAATGTCACAGAAGG
AAAAATTTATGTCGAAACTGAAAGAGCACGTTTGACAAAGGAATTGGCACGAATCAAAGA
ATCTCATGGAGATATTGAAGGGGCTGCTGCAGTGTTACAGGATCTCCAAGTCGAAACATT
TGGTTCTATGGAAAAGAAGGAAAACGTGGA

consensusID : consensus_10631#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 335
fasta sequence

                              [TTCGGCACGAGGTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTAATGATCAACTTAAATGCTCATGATTCTCTCTACTTAAATATTAGCAAAAATTACTGGGAGATATACAATTCTAAAAGTGTACAAGAAGATGAACAAAAGCGGTTGCTAGTACTCAGGCATGTAATCATATATTTGTTACTTTCTCCCTATGACAACGAACAACACGACTTAATGTGTCGCCGAAAGCTGGTAAAGGATATGGAAAAAATACAAATTTACTTTGATATGCTCAAAGCATTTACAACACAAGAATTTATTAAATGGGATGAATTCTC]

[+] EMBL CD077922             [TTCGGCACGAGGTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTAATGATCAACTTAAATGCTCATGATTCTCTCTACTTAAATATTAGCAAAAATTACTGGGAGATATACAATTCTAAAAGTGTACAAGAAGATGAACAAAAGCGGTTGCTAGTACTCAGGCATGTAATCATATATTTGTTACTTTCTCCCTATGACAACGAACAACACGACTTAATGTGTCGCCGAAAGCTGGTAAAGGATATGGAAAAAATACAAATTTACTTTGATATGCTCAAAGCATTTACAACACAAGAATTTATTAAATGGGATGAATTCTC]




>consensus_10631#3
TTCGGCACGAGGTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTA
ATGATCAACTTAAATGCTCATGATTCTCTCTACTTAAATATTAGCAAAAATTACTGGGAG
ATATACAATTCTAAAAGTGTACAAGAAGATGAACAAAAGCGGTTGCTAGTACTCAGGCAT
GTAATCATATATTTGTTACTTTCTCCCTATGACAACGAACAACACGACTTAATGTGTCGC
CGAAAGCTGGTAAAGGATATGGAAAAAATACAAATTTACTTTGATATGCTCAAAGCATTT
ACAACACAAGAATTTATTAAATGGGATGAATTCTC

consensusID : consensus_10631#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 290
fasta sequence

                              [GGACTTTATCCGCACTCAAATCATAAGCAATAAAATATCAACTAAGTTCTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTAATGATCAACTTAAATGCTCATGATTCTCTCTACTTAAATATTAGCAAAAATTACTGGGAGATATACAATTCTAAAAGTGTACAAGAAGATGAACAAAAGCGGTTGCTAGTACTCAGGCATGTAATCATATATTTGTTACTTTCTCCCTATGACAACGAACAACACGACTTAATGTGTCGCCGAAAGCTGGTAA]

[+] EMBL CD185386             [GGGCTTTATCCGCACTCAAATCATAAGCAATAAAATATCAACTAAGTTCTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTAATGATCAACTTAAATGCTCATGATTCTCTCTACTTAAATATTAGCAAAAATTACTGGGAGATATACAATTCTAAAAGTGTACAAGAAGATGAACAAAAGCGGTTGCTAGTACTCAGGCATGTAATCATATATTTGTTACTTTCTCCCTATGACAACGAACAACACGACTTAATGTGTCGCCGAAAGCTGGTAA]
[+] EMBL CD131359             [GGACTTTATCCGCACTCAAATCATAAGCAATAAAATATCAACTAAGTTCTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTAATGATCAACTTAAATGCTCATGATTCTCTCTACTTAAATATTAGCAAAAATTACTGGGAGATATACAATTCTAAAAGTGTACAAGAAGATGAACAAAAGCGGTTGCTAGTACTCAGGCATGTAATCATATATTTGTTACTTTCTCCCTATGACAACGAACAACACGACTTAATGTGTCGCCGAAAGCTGGTA ]
[+] EMBL CD131502             [GGACTTTATCCGCACTCAAATCATAAGCAATAAAATATCAACTAAGTTCTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTAATGATCAACTTAAATGCTCATGATTCTCTCTACTTAAATATTAGCAAAAATTACTGGGAGATATACAATTCTAAAAGTGTACAAGAAGATGAACAAAAGCGGTTGCTAGTACTCAGGATTGTCATCATATATCAGTTGCTTTTTTCGTATGACAAGGAACAACACGACTTAATGTGTCGCCGAAAGCTGGTA ]




>consensus_10631#4
GGACTTTATCCGCACTCAAATCATAAGCAATAAAATATCAACTAAGTTCTTTGCTGATGC
AGAAAACGAGGACTTGAAACTCAAGTTCTACAACTTAATGATCAACTTAAATGCTCATGA
TTCTCTCTACTTAAATATTAGCAAAAATTACTGGGAGATATACAATTCTAAAAGTGTACA
AGAAGATGAACAAAAGCGGTTGCTAGTACTCAGGCATGTAATCATATATTTGTTACTTTC
TCCCTATGACAACGAACAACACGACTTAATGTGTCGCCGAAAGCTGGTAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10631#0      TATTTACGTCACCTGAGTAAGACGACAACCATACACTCTTTGAAGGATCATGGACGACAA 60
consensus_10631#2      ------------------------------------------------------------
consensus_10631#1      ------------------------GGGCTTTATCCGCACTCGAATCATAAGCAATAAAAT 36
consensus_10631#3      ------------------------------------------------------------
consensus_10631#4      ------------------------------------------------------------
                                                                                   

consensus_10631#0      AATCCAACATAAAATGGAAGTCGACTATTCCGTTAGCGTTGATAACTTACTCGTAACAGT 120
consensus_10631#2      ------------------------------------------------------------
consensus_10631#1      ATCAACTAAGTTCTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCTACAACTT 96
consensus_10631#3      ------------------------------------------------------------
consensus_10631#4      ------------------------------------------------------------
                                                                                   

consensus_10631#0      GAAGTCTCTATTAGCGGCTGGAAATTTTGAGTCTGCT---GTAGAACAGTGTGTTTCTCT 177
consensus_10631#2      ------------GGCTAAAAAGGACTTTATCCGCACTCAAACAGAACAGTGTGTTTCTCT 48
consensus_10631#1      AATGATCAACTTAAATGCTCATGATTCT--CTCTACTTAAATATTAGCAAAAATTACTGG 154
consensus_10631#3      ------------------------------------------TTCGGCACGAGGTTTGCT 18
consensus_10631#4      -----GGACTTTATCCGCACTCAAATCATAAGCAATAAAATATCAACTAAGTTCTTTGCT 55
                                                                             *     

consensus_10631#0      CGAAAAGCAAACAAGAACGGCTTCTGATGCAATATCTACAGGGCGACTGCTGG-----AG 232
consensus_10631#2      CGAAAAACAAACAAGAACGGCTTCTGATGCAATATCTACAGGGCGACTGCTGG-----AG 103
consensus_10631#1      GAGATATACAATTCTAAAAGTGTACAAGAAGATGAACA-AAAGCGGTTGCTAGTACTCAG 213
consensus_10631#3      GATGCAGAAAACGAGGA---CTTGAAACTCAAGTTCTACAACTTAATGATCAA--CTTAA 73
consensus_10631#4      GATGCAGAAAACGAGGA---CTTGAAACTCAAGTTCTACAACTTAATGATCAA--CTTAA 110
                            *   **     *     *   *    *     * *                  * 

consensus_10631#0      GCAATTGTCGAGATTTTAGCTGAAAGTTCTCAGTGGTCACGACTTAATGAGCATCTCATT 292
consensus_10631#2      GCAATTGTCGAGATTTTAGCTGAAAGTTCTCAGTGGTCACGACTTAATGAGCATCTCATT 163
consensus_10631#1      GCAATTGTCGAGATTTTAGCTGAAAGTTCTCAGTGGTCACGACTTAATGAGCATCTCATT 273
consensus_10631#3      ATGCTCATGATTCTCTCTACTTAAA--TATTAGCAAAAATTACTGGGAGA-TATACAATT 130
consensus_10631#4      ATGCTCATGATTCTCTCTACTTAAA--TATTAGCAAAAATTACTGGGAGA-TATACAATT 167
                           *  *     * *   ** ***  * * **     *  ***    **  **   ***

consensus_10631#0      TTAATGAC--AAAAAAGCACGGTCAAATGAAGCAGTCTGTATCCAAGATGGT--TCAAAA 348
consensus_10631#2      TTAATGAC--AAAAAAGCACGGTCAAATGAAGCAGTCTGTATCCAAGATGGT--TCAAAA 219
consensus_10631#1      TTAATGAC--AAAAAAGCACGGTCAAATGAAGCAGTCTGTATCCAAGATGGT--TCAAAA 329
consensus_10631#3      CTAAAAGTGTACAAGAAGATGAACAAAAGCGGTTGCTAGTACTCAGGCATGTAATCATAT 190
consensus_10631#4      CTAAAAGTGTACAAGAAGATGAACAAAAGCGGTTGCTAGTACTCAGGCATGTAATCATAT 227
                        ***      * ** *  * *  **** *  *  *   ***  ** *   **  *** * 

consensus_10631#0      AGCTATGGAGTATCTTGATAAAACACCGAGTGAACCGGTTAAACTCGAGTTAATCGAAGC 408
consensus_10631#2      AGCTATGGAGTATCTTGATAAAACACCGAGTGAACCGGTTAAACTCGAGTTAATCGAAGC 279
consensus_10631#1      AGCTATGGAGTATCTTGATAAAACACCGAGTGAACCGGTCAAACTCGAGTTAATCGAAGC 389
consensus_10631#3      ATTTGTT-ACTTTCTCCCTATGACAACGAACAACACGACTTAAT--GTGTCGCCGAAAGC 247
consensus_10631#4      ATTTGTT-ACTTTCTCCCTATGACAACGAACAACACGACTTAAT--GTGTCGCCGAAAGC 284
                       *  * *  * * ***   **  *** ***   *  **    **   * **      ****

consensus_10631#0      TCTTAG-GAATGTCACAGAAGGAAAAATTTATGTCGAAACTGAAAGAGCACGTTTGACAA 467
consensus_10631#2      TCTTAG-GAATGTCACAGAAGGAAAAATTTATGTCGAAACTGAAAGAGCACGTTTGACAA 338
consensus_10631#1      TCTTAG-GAATGTCACAGAAGGAAAAATT-ATGTCGAAACTGAAAGAGCACGTTTGACAA 447
consensus_10631#3      TGGTAAAGGATATGGAAAAAATACAAATTTACTTTGATATGCTCAAAGCATTTACAACAC 307
consensus_10631#4      TGGTAA------------------------------------------------------ 290
                       *  **                                                       

consensus_10631#0      AGGAATTGGCACGAATCAAAGAATCTCATGGAGATATTGAAGGGGCTGCTGCAGTGTTAC 527
consensus_10631#2      AGGAATTGGCACGAATCAAAGAATCTCATGGAGATATTGAAGGGGCTGCTGCAGTGTTAC 398
consensus_10631#1      AGGAATTGGCACGAATCANAGAATCTCATGGAGATATTGAAGGGGCTGCTGCAGTGTTAC 507
consensus_10631#3      AAGAATTTATTAAATGGGATGAATTCTC-------------------------------- 335
consensus_10631#4      ------------------------------------------------------------
                                                                                   

consensus_10631#0      AGGATCTCCAAGTCGAAACATTTGGTTCTATGGAAAAGAAGGAAAAAGTGGAATTCATGT 587
consensus_10631#2      AGGATCTCCAAGTCGAAACATTTGGTTCTATGGAAAAGAAGGAAAACGTGGA-------- 450
consensus_10631#1      AGGATCTCCAAGTCGAAACATTTGGTTCTATGGAAAANAAAA------------------ 549
consensus_10631#3      ------------------------------------------------------------
consensus_10631#4      ------------------------------------------------------------
                                                                                   

consensus_10631#0      TGGAACAGATGAGGCTTTGTTTGGCTAAAAAGGACTTTATCCGCACTCAAATCATAAGCA 647
consensus_10631#2      ------------------------------------------------------------
consensus_10631#1      ------------------------------------------------------------
consensus_10631#3      ------------------------------------------------------------
consensus_10631#4      ------------------------------------------------------------
                                                                                   

consensus_10631#0      ATAAAATATCAACTAAGTTCTTTGCTGATGCAGAAAACGAGGACTTGAAACTCAAGTTCT 707
consensus_10631#2      ------------------------------------------------------------
consensus_10631#1      ------------------------------------------------------------
consensus_10631#3      ------------------------------------------------------------
consensus_10631#4      ------------------------------------------------------------
                                                                                   

consensus_10631#0      ACAACTTAATGATCAACTTAAATGCTCATGATTCTCTCTACTTAAATATTAGCAAAAATT 767
consensus_10631#2      ------------------------------------------------------------
consensus_10631#1      ------------------------------------------------------------
consensus_10631#3      ------------------------------------------------------------
consensus_10631#4      ------------------------------------------------------------
                                                                                   

consensus_10631#0      ACTGGGAGATATACAATTCTAAAAGTGTACAAGAACATGAACTCTGAAAATTCTTAAGGG 827
consensus_10631#2      ------------------------------------------------------------
consensus_10631#1      ------------------------------------------------------------
consensus_10631#3      ------------------------------------------------------------
consensus_10631#4      ------------------------------------------------------------
                                                                                   

consensus_10631#0      ACAATCGTACTTTTGATATTTTAACACCACGATAGCCTAAAAATAGCTTCTGGTTTGTAA 887
consensus_10631#2      ------------------------------------------------------------
consensus_10631#1      ------------------------------------------------------------
consensus_10631#3      ------------------------------------------------------------
consensus_10631#4      ------------------------------------------------------------
                                                                                   

consensus_10631#0      AGCGATTACCAAATGTTATTACAGAACGAATATTAGAAATTTTGGGACTTTGGAGCTCTT 947
consensus_10631#2      ------------------------------------------------------------
consensus_10631#1      ------------------------------------------------------------
consensus_10631#3      ------------------------------------------------------------
consensus_10631#4      ------------------------------------------------------------
                                                                                   

consensus_10631#0      TTTGTGGNTATTATCATTATTGTTTTGTATTTTCACTGTTTTATTAGATACCTATTAT 1005
consensus_10631#2      ----------------------------------------------------------
consensus_10631#1      ----------------------------------------------------------
consensus_10631#3      ----------------------------------------------------------
consensus_10631#4      ----------------------------------------------------------