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Schistosoma mansoni
cluster # 10635 cluster # 10635       Sequences # 19       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10635#0 length = 999 sequences # 7  
consensus_10635#1 length = 626 sequences # 10  
consensus_10635#2 length = 474 sequences # 2  

consensusID : consensus_10635#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 999
fasta sequence
                              [CTACGGGCCAANAATTCGGCACGAGGGGCACATTCAAATTAGTCTTCTTCACGTTGGTTGGTTATGCCTAAAAATAAAGGAAAGGGAGGAAAGAATCGACGTCGAGGAAAGAACGAGAATGAAAGTCAGAAACGCGACTTGATATATAAAGAAGCTGGTCAAGAATATGCAAAAGTTGAACGCCTTCTAGGCAATGGTCGATTGGAGGCCTATTGTTTCGACGGTGTAAAAAGGCTGTGTCATATTCGTGGAAAGTTGCGCAAAAAAGTATGGATCAGTAATGGTGATATCATTTTAATTGGTTTACGAGATTATCAAGACAATAAAGCCGATGTGATTATGAAATATTTGAATGATGAAGCTAGAACTCTTAAATCATTAGGAGAGATTCCTGACACTATAAAATTAGAAGAGAATGATGATATTGAATTCGATGCCAATGCTGCCATCTTCGAAGATGATGAAGATGATGAAAAAGGATCAGACTCCGAAGATGAGGAAGGCTCAGATGATGATGATGCTGATGACAACAGTGATGATTCTGATGAGATTGCAGAAATCAACCAACGATATCGAGCTGATACTGGTATCGGTAAAGATCAGCGAAATAATCGTCGAAGATAGTTGGTGTTTCTTTTTAATTGTGGTTNTCTTGTTAAAGCCATTCGACCGCATGGTGCTGGTTATTACTTTCATTNTCGATGGTCTAATTGCCAAANCTCTNNNCTCTATCAATACTGNAAATCATTTTGTGNGTGTCATTGATATGAAATAACATCAAAGTTNNCTCATCATGATGACCATCTATACAGATACATAGTATCATTCTAATTTTTTTTAGCGAATGTTTTTGGGTAATAGCATCCTCACACTTATGAAGTATATTTGGTAACAGGTCTGTTATTAGACGTANTNGTAGACCTGATGAGGNNNNCTTGAGGTCTTCCTTTCCTGGCATTTCCAAATGGCTATTTCTTTANNCGGACTTAAAGCCAAGTT]

[+] EMBL CD081972             [CTACGGGCCAANAATTCGGCACGAGGGGCACATTCAAATTAGTCTTCTTCACGTTGGTTGGTTATGCCTAAAAATAAAGGAAAGGGAGGAAAGAATCGACGTCGAGGAAAGAACGAGAATGAAAGTCAGAAACGCGACTTGATATATAAAGAAGCTGGTCAAGAATATGCAAAAGTTGAACGCCTTCTAGGCAATGGTCGATTGGAGGCCTATTGTTTCGACGGTGTAAAAAGGCTGTGTCATATTCGTGGAAAGTTGCGCAAAAAAGTATGGATCAGTAATGGTGATATCATTTTAATTGGTTTACGAGATTATCAAGACAATAAAGCCGATGTGATTATGAAATATTTGAATGATGAAGCTAGAACTCTTAAATCATTAGGAGAGATTCCTGACACTATAAAATTAGAAGAGAATGATGATATTGAATTCGATGCCAATGCTGCCATCTTCGAAGATGATGAAGATGATGAAAAAGGATCAGACTCCGAAGATGAGGAAGGCTCAGATGATGATGATGCTGATGACAACAGTGATGATTCTGATGAGATTGCAGAAATCAACCAACGATATCGAGCTGATACTGGTATCGGTAAAGATCAGCGAAATAATCGTCGAAGATAGTTGGTGTTTCTTTTTAATTGTGGTTNTCTTGTTAAAGCCATTCGACCGCATGGTGCTGGTTATTACTTTCATTNTCGATGGTCTAATTGCCAAANCTCTNNNCTCTATCAATACTGNAAATCATTTTGTGNGTGTCATTGATATGAAATAACATCAAAGTTNNCTCATCATGATGACCATCTATACAGATACATAGTATCATTCTAATTTTTTTTAGCGAATGTTTTTGGGTAATAGCATCCTCACACTTATGAAGTATATTTGGTAACAGGTCTGTTATTAGACGTANTNGTAGACCTGATGAGGNNNNCTTGAGGTCTTCCTTTCCTGGCATTTCCAAATGGCTATTTCTTTANNCGGACTTAAAGCCAAGTT]
[+] EMBL CD124197             [                      ttgtGGCACATTCAAATTAGTCTTCTTCACGTTGGTTGGTTATGCCTAAAAATAAAGGAAAGGGAGGAAAGAATCGACGTCGAGGAAAGAACGAGAATGAAAGTCAGAAACGCGACTTGATATATAAAGAAGCTGGTCAAGAATATGCAAAAGTTGAACGCCTTCTAGGCAATGGTCGATTGGAGGCCTATTGTTTCGACGGTGTAAAAAGGCTGTGTCATATTCGTGGAAAGTTGCGCAAAAAAGTATGGATCAGTAATGGTGATATCATTTTAATTGGTTTACGAGATTATCAAGACAATAAAGCCGATGTGATTATGAAATATTTGAATGATGAAGCTAGAACTCTTAAATCATTAGGAGAGATTCCTGACATTATAAAATTAGAAGAGAATGATGATATTGAATTCGATGCCAATGCTGCCATCTTCGAAGATGATGAAGATGATGAAAAAGGATCAGACTCCGAAGATGAGGAAGGCTCAGATGATGACGATGCTGATGACAACAGTGATGATTCTGATGAGATTGCAGAAATCAACCAACGATATCGAGCTGATACTGGTATCGGTAAAGATCAGCGAAATAATCG                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD192540             [                                                                                                                ACGAGAATGAAAGTCAAAAACGCGACTTGATATATAAAGAAGCTGGCCAAGAATTTGCAGAAGTTGAACGCCTTCTAGGCAATGGTCGATTGGAGGCCTATTGTTTCGACGGTGTAAAAAGGCTGTGTCATATTCGTGGAAAGTTGCGCAAAAAAGTATGGATCAGTAATGGTGATATCATTTTAATTGGTTTACGAGATTATCAAGACAATAAAGCCGATGTGATTATGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD157220             [                                                                                                                 CGAGAATGAAAGTCAGAAACGCGACTTGATATATAAAGAAGCTGGTCAAGAATATGCAAAAGTTGTACGCCTTCTAGGCTATGGTCGATTGGAGGCCTATTGTTTCGACGGTGTAAAAAGGCTGTGTCATATTCGTGGAAAGTTGCGCAAAAAAGTATGGATCAGTAATGGTGATATCATTTTAATTGGTTTACGAGATTATCAAGACAATAAAGCCGATGTGATTATGAAATATTTGAATGATGAAGCTAGAACTCTTAAATCATTAGGAGAGATTCCTGACACTATAAAATTAGAAGAGAATGATGATATTGAATTCGATGCCAATGCTGCCATCTTCGAAGATGATGAAGATGATGAAAAAGGATCAGACTCCGAAGATGAGGAAGGCTCAGATGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD196140             [                                                                                                                                                                           AAAGTTGAACGCCTTCTAGGCAATGGTCGATTGGAGGCCTATTGTTTCGACGGTGTAAAAAGGCTGTGTCATATTCGTGGAAAGTTGCGCAAAAAAGTATGGATCAGTAATGGTGATATCATTTTAATTGGTCTACGAGATTATCAAGACAATAAAGCCGATGTGATTATGAAATATTTGAATGATGAAGCTAGAACTCTTAAATCATTAGGAGAGATTCCTGACACTATAAAATTAGAAGAGAATGATGATATTGAATTCGATGCCAATGCTGCCATCTTCGAAGATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD118981             [                                                                                                                                                                                                                                                                                                  CATTTTAATTGGTTTACGAGATTATCAAGACAATAAAGCCGATGTGATTATGAAATATTTGAATGATGAAGCTAGAACTCTTAAATCATTAGGAGAGATTCCTGACACTATAAAATTAGAAGAGAATGATGATATTGAATTCGATGCCAATGCTGCCATCTTCGAAGATGATGAAGATGATGAAAAAGGATCAGACTCCGAAGATGAGGAAGGCTCAGATGATGATGATGCTGATGACAACAGTGATGATTCTGATGAGATTGCAGAAATCAACCAACGATATCGAGCTGATACTGGTATCGGTAAAGATCAGCGAAATAATCGTCGAAGATAGTTG                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD162587             [                                                                                                                                                                                                                                                                                                                                    AAAGCCGATGTGATTATGAAATATTTGAATGATGAAGCTAGAACTCTTAAATCATTAGGAGAGATTCCTGACACTATAAAATCAGAAGAGAATGATGATATTGAATTCGATGCCAATGCTGCCATCTTCGAAGATGATGAAGATGATGAAAAAGGATCAGACTCCGAAGATGAGGAAGGCTCAGATGATGATGATGCTGATGACAACAGTGATGATTCTGATGAGATTGCAGAAATCAACCAACGATATCGAGCTGATACTGGTATCGGTAAAGATCAGCGAAATAATCGTCGAAGATAGTTGGTGTTTCTTTTTAATTGTGGTTTTCTTGTTAAAG                                                                                                                                                                                                                                                                                                                                                  ]


>consensus_10635#0 CTACGGGCCAANAATTCGGCACGAGGGGCACATTCAAATTAGTCTTCTTCACGTTGGTTG GTTATGCCTAAAAATAAAGGAAAGGGAGGAAAGAATCGACGTCGAGGAAAGAACGAGAAT GAAAGTCAGAAACGCGACTTGATATATAAAGAAGCTGGTCAAGAATATGCAAAAGTTGAA CGCCTTCTAGGCAATGGTCGATTGGAGGCCTATTGTTTCGACGGTGTAAAAAGGCTGTGT CATATTCGTGGAAAGTTGCGCAAAAAAGTATGGATCAGTAATGGTGATATCATTTTAATT GGTTTACGAGATTATCAAGACAATAAAGCCGATGTGATTATGAAATATTTGAATGATGAA GCTAGAACTCTTAAATCATTAGGAGAGATTCCTGACACTATAAAATTAGAAGAGAATGAT GATATTGAATTCGATGCCAATGCTGCCATCTTCGAAGATGATGAAGATGATGAAAAAGGA TCAGACTCCGAAGATGAGGAAGGCTCAGATGATGATGATGCTGATGACAACAGTGATGAT TCTGATGAGATTGCAGAAATCAACCAACGATATCGAGCTGATACTGGTATCGGTAAAGAT CAGCGAAATAATCGTCGAAGATAGTTGGTGTTTCTTTTTAATTGTGGTTNTCTTGTTAAA GCCATTCGACCGCATGGTGCTGGTTATTACTTTCATTNTCGATGGTCTAATTGCCAAANC TCTNNNCTCTATCAATACTGNAAATCATTTTGTGNGTGTCATTGATATGAAATAACATCA AAGTTNNCTCATCATGATGACCATCTATACAGATACATAGTATCATTCTAATTTTTTTTA GCGAATGTTTTTGGGTAATAGCATCCTCACACTTATGAAGTATATTTGGTAACAGGTCTG TTATTAGACGTANTNGTAGACCTGATGAGGNNNNCTTGAGGTCTTCCTTTCCTGGCATTT CCAAATGGCTATTTCTTTANNCGGACTTAAAGCCAAGTT



consensusID : consensus_10635#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 626
fasta sequence
                              [GAGGAAGGCTCAGATGATGATGATGCTGATGACACCAGTGATGATTCTGATGAGATTGCAGAAATCAACCAACGATATCGAGCTGATACTGGTATCGGTAAAGATCAGCGAAATAATCGTCGAAGATAGTTGGTGTTTCTTTTTAATTGTGG-TTTTCTTGTTAAAGCCATTCGACCGCATGTTGCT-GGTTATTACTTTCATTTTCGAT-GGTCTAATTGTCCAAACTCTTCCTCTTATTCAGATACTGTAAATCATTTGTTGTGTGTCATTGATATGAAATAAACATCAAAAGTTTCTCAATCAATGATGACCATCTTATACCAGATACAATAGTATCATTCTTATTTTTTTTTAAGCGATGTTTTTTTGTGTAATTAGCATCC-TCAACACTTCATGAAGTTATATTTGGTAACAAGGTCTTGTTATTTTAGACGTAATTTGTTAGACACTGAATTGATGGTTCCTCTTGATGTTCTCTCCTTTTCTCTGTTCATTTTTCTCAATTTGTCTTTATTTTCTTTTAGTCGTGATCTTTTCAAAGCAATAAGTATGTTGGTCAGTTAGAGAATTTCGTTTTGTTATTTTAAAACTGTANAATGGCTGGGGAATATAAATATGGTTATGAC]

[-] EMBL CD068795             [GAGGAAGGCTCAGATGATGATGATGCTGATGACACCAGTGATGATTCTGATGAGATTGCAGAAATCAACCAACGATATCGAGCTGATACTGGTATCGGTAAAGATCAGCGAAATAATCGTCGAAGATAGTTGGTGTTTCTTTTTAATTGTGG TTTTCTTGTTAAAGCCATTCGACCGCATGTTGCT GGTTATTACTTTCATTTTCGAT GGTCTAATTGTCCAAACTCTTCCTCTTATTCAGATACTGTAAATCATTTGTTGTGTGTCATTGATATGAAATAAACATCAAAAGTTTCTCAATCAATGATGACCATCTTATACCAGATACAATAGTATCATTCTTATTTTTTTTTAAGCGATGTTTTTTTGTGTAATTAGCATCC TCAACACTTCATGAAGTTATATTTGGTAACAAGGTCTTGTTATTTTAGACGTAATTTGTTAGACACTGAATTGATGGTTCCTCTTGATGTTCTCTCCTTTTCTCTGTTCATTTTTCTCAATTTGTCTTTATTTTCTTTTAGTCGTGATCTTTTCAAAGCAATAAGTATGTTGGTCAGTTAGAGAATTTCGTTTTGTTATTTTAAAACTGTANA                              ]
[+] EMBL CD194309             [       GCTCAGATGATGATGATGCTGATGACAACAGTGATGATTCTGATGAGATTGCAGAAATCAACCAACGATATCGAGCTGATACTGGTATCGGTAAAGATCAGCGAAATAATCGTCGAAGATAGTTGGTGTTTCTTTTTAATTGTGG TTTTCTTGTTAAAGCCATTCGACCGCATGTTGCT GGTTAGTACTTTCATTTTCGAT GGTCTAATTGTCCAAACTCTTCCTCTTATTCAGATACTGTAAATCATTTGTTGTGTGTCATTGATATGAAATAAACATCAAAAGTTTCTCAATCAATGATGACCATCTTATACCAGATACAATAGTATCATTCTTATTTTTTTTTAAGCGATGTTTTTTTGTGTAATTAGCATCC TCAACACTTCATGAAGTTATATTTGGTAACAAGGTCTTGTTATTTTAGACGTA                                                                                                                                                                                              ]
[-] EMBL CD098356             [                                                                           TATCGAGCTGATACTGGTATCGGTAAAGATCAGCGAAATAATCGTCGAAGATAGTTGATGTTTCTTTTTAATTGTGG TTTTCTTGTTAAAGCCATTCGACCGCATGTTGCT GGTTATTACTTTCATTTTCGAT GGTCTAATTGTCCAAACTCTTCCTCTTATTCAGATACTGTAAATCATTTGTTGTGTGTCATTGATATGAAATAAACATCAAAAGTTTCTCAATCAATGATGACCATCTTATACCAGATACAATAGTATCATTCTTATTTTTTTTTAAGCGATGTTTTTTTGTGTAATTAGCATCC TCAACACTTCATGAAGTTATATTTGGTAACAAGGTCTTGTTATTTTAGACGT                                                                                                                                                                                               ]
[+] EMBL CD157163             [                                                                              CGAGCTGATACTGGTATCGGTAGAGATCAGCGAAATAATCGTCGAAGATAGTTGGTGTTTCTTTTTAATTGTGG TTTTCTTGTTAAAGCCATTCGACCGCATGTTGCT GGTTATTACTTTCATTTTCGAT GGTCTAATTGTCCAAACTCTTCCTCTTATTCAGATACTGTAAATCATTTGTTGTGTGTCATTGATATGAAATAAACATCAAAAGTTTCTCAATCTATGATGACCATCTTATACCAGATACAATAGTATCATTCTTA TTTTTTTTAAGCGATGTTTTTTTGTGTAATTAGCATCC TCAACACTTCATGAAGTTATATTTGGTAACAAGGTCTTGTTATTTTAGACGTAATTTGTTAGACACTGAATTGAT                                                                                                                                                                        ]
[+] EMBL CD138298             [                                                                                                         CAGCGAAATAATCGTCGAAGATAGTTGGTGTTTCTTTTTAATTGTGG TTTTCTTGTTAAAGCCATTCGACCGCATGTTGCT GGTTATTACTTTCATTTTCGAT GGTCTAATTGTCCAAACTCTTCCTCTTATTCAGATACTGTAAATCATTTGTTGTGTGTCATTGATATGAAATAAACATCANAAGTTTCTCAATCAATGATGACCATCTTATACCAGATACAATAGTATCATTCTTATTTTTTTTTAAGCGATGTTTTTTTGTGTAATTAGCATCCNTC ACACTTCATGAAGTTATAT                                                                                                                                                                                                                             ]
[-] EMBL CD146800             [                                                                                                                                              TTAA TGTGGTTTTTCTTGTTAAAGCCATTCGACCGCATGTTGCT GGTTATTACTTTCATTTTCGAT GGTCTAATTGTCCAAACTCTTCCTCTTATTCAGATACTGTAAATCATTTGTTGTGTGTCATTGATATGAAATAAACATCAAAAGTTTCTCAATCAATGATGACCATCTTATACCAGATACAATAGTATCATTCTTATTTTTTTTTAAGCGATGTTTTTTTGTGTAATTAGCATCC CCAACACTTCATGAAGTTATATTTGGTAACAAGGTCTTGTTATTTTAGACGTAATTTGTTAGACACTGA                                                                                                                                                                              ]
[-] EMBL CD141578             [                                                                                                                                                cATTGTGG TTTTCTTGTTAAAGCCATTCGACCGCATGTTGCT GGTTATTACTGTCATTTTCGAT GGTCTAATTGTCCAAACTCTTCCTCTTATTCAGATACTGTAAATCATTTGTTGTGTGTCATTGATATGAAATAAACATCAAAAGTTTCTCAATCAATGATGACCATCTTATACCAGATACAATAGTATCATTCTTATTTTTTTTTAAGCGATGTTTTTTTGTGTAATTAGCATCC TCAACACTTCATGAAGTTATATTTGGTAACAAGGTCTTGTTATTTTAGACGTAATTTGTTAGACACTGAA                                                                                                                                                                             ]
[-] EMBL CD142508             [                                                                                                                                                                                        GCTGGGTTA TAC TTCATTTTCGATGGGTCTAATTGTCCAAACTCTTCCTCTTATTCAGATACTGTAAATCATNTGTTGTGTGTCATTGATATGAAATAAACATCAAAAGTTTCTCAATCAATGATGACCATCTTATACCAGATACAATAGTATCATTCTTATTTTTTTTTAAGCGATGTTTTTTTGTGTAATTAGCATCC TCAACACTTCATGAAGTTATATTTGGTAACAAGGTCTTGTTATTTTAGACGTAATTTGTTAGACACTGAATTGATGGTTCCTCTctcg                                                                                                                                                           ]
[-] EMBL CD138390             [                                                                                                                                                                                                                                                                                       AAATAAACATCAAAAGTTTCTCAATCAATGATGACCGTCTTATACCAGATACAATAGTATCATTCTTATTTTTTTTTAAGCGATGTTTTTTTGTGTAATTAGCATCC TCAACACTTCATGAAGTTATATTTGGTAACAAGGTCTTGTTATTTTAGACGTAATTTGTTAGACACTGAATTGATGGTTCCTCTTGATGTTCTCTCCTTTTCTCTGTTCATTTTTCTCAATTTGTCTTTATTTTCTTTTAGTCGTGATCTTTTCAAAGCAATA                                                                                ]
[+] EMBL SM7581               [                                                                                                                                                                                                                                                                                                                                             cgagATCATTCTTATTTNTTTTTAAGCGATGTTTTTTGGTGTAATTAGCATCC TCAACACTNCATGAAGTTATATTTGGTAACAAGGTCTTGTTATTTTAGACGTAATTTGTTAGACACTGAATTGATGGTTCCTCTTGATGTNCTCTCCTTTTCTCTGTTCATTTNNCTCAATTNGTCTTTATTTCCTTTNAGTCGNGATCTTTNCAAAGCAATAAGTATGTTGGNCAGTTAGAGAATTTCGTTTGGTTATTTTAAAGCTGTAACATGGCTGGGGAATATAAATATGGTTATGAC]


>consensus_10635#1 GAGGAAGGCTCAGATGATGATGATGCTGATGACACCAGTGATGATTCTGATGAGATTGCA GAAATCAACCAACGATATCGAGCTGATACTGGTATCGGTAAAGATCAGCGAAATAATCGT CGAAGATAGTTGGTGTTTCTTTTTAATTGTGGTTTTCTTGTTAAAGCCATTCGACCGCAT GTTGCTGGTTATTACTTTCATTTTCGATGGTCTAATTGTCCAAACTCTTCCTCTTATTCA GATACTGTAAATCATTTGTTGTGTGTCATTGATATGAAATAAACATCAAAAGTTTCTCAA TCAATGATGACCATCTTATACCAGATACAATAGTATCATTCTTATTTTTTTTTAAGCGAT GTTTTTTTGTGTAATTAGCATCCTCAACACTTCATGAAGTTATATTTGGTAACAAGGTCT TGTTATTTTAGACGTAATTTGTTAGACACTGAATTGATGGTTCCTCTTGATGTTCTCTCC TTTTCTCTGTTCATTTTTCTCAATTTGTCTTTATTTTCTTTTAGTCGTGATCTTTTCAAA GCAATAAGTATGTTGGTCAGTTAGAGAATTTCGTTTTGTTATTTTAAAACTGTANAATGG CTGGGGAATATAAATATGGTTATGAC



consensusID : consensus_10635#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 474
fasta sequence
                              [TGAGATTGCAGAAATCAACCAACGATATCGAGCTGATACTGGTATCGGTAAAGATCAGCGAAATAATCGTCGAAGATAGTTGGTGTTTCTTTTTAATTGTGGTTTTCTTGTTAAAGCCATTCGACCGCATGTTGCTGGTTCATTCACCTTGTCCTGATTGTTGATAAAATATTACTTTCATTTTCGATGGTCTAATTGTCCAAACTCTTCCTCTTATTCAGATACTGTAAATCATTTGTTGTGTGTCATTGATATGAAATAAACATCAAAAGTTTCTCAATCAATGATGACCATCTTATACCAGATACAATAGTATCATTCTTATTTTTTTTTAAGCGATGTTTTTTTGTGTAATTAGCATCCTCAACACTTCATGAAGTTATATTTGGTAACAAGGTCTTGTTATTTTAGACGTAATTTGTTAGACACTGAATTGATGGTTCCTCTTGATGTTCTCTCCTTTTCTCTGTTGTG]

[-] EMBL CD152950             [TGAGATTGCAGAAATCAACCAACGATATCGAGCTGATACTGGTATCGGTAAAGATCAGCGAAATAATCGTCGAAGATAGTTGGTGTTTCTTTTTAATTGTGGTTTTCTTGTTAAAGCCATTCGACCGCATGTTGCTGGTTCATTCACCTTGTCCTGATTGTTGATAAAATATTACTTTCATTTTCGATGGTCTAATTGTCCAAACTCTTCCTCTTATTCAGATACTGTAAATCATTTGTTGTGTGTCATTGATATGAAATAAACATCAAAAGTTTCTCAATCAATGATGACCATCTTATACCAGATACAATAGTATCATTCTTATTTTTTTTTAAGCGATGTTTTTTTGTGTAATTAGCATCCTCAACACTTCATGAAGTTATATTTGGTAACAAGGTCTTGTTATTTTAGACGTAATTTGTTAGACACTGAATTGATGGTTCCTCTTGATGTTCTCTCCTTTTCTCTGTTGTG]
[-] EMBL CD152579             [                                                                                                                                                          TGATTGTTGATAAAATATTACTTTCATTTTCGATGGTCTAATTGTCCAAACTCTTCCTCTTATTCAGATACTGTAAATCATTTGTTGTGTGTCATTGATATGAAATAAACATCAAAAGTTTCTCAATCAATGATGACCATCTTATACCAGATACAATAGTATCATTCTTATTTTTTTTTAAGCGATGTTTTTTTGTGTAATTAGCATCCTCAACACTTCATGAAGTTATATTTGGTAACAAGGTCTTGTTATTTTAGACGTAATTTGTTAGACACTGAATCGATGCTTCATCTTGATGTTC                   ]


>consensus_10635#2 TGAGATTGCAGAAATCAACCAACGATATCGAGCTGATACTGGTATCGGTAAAGATCAGCG AAATAATCGTCGAAGATAGTTGGTGTTTCTTTTTAATTGTGGTTTTCTTGTTAAAGCCAT TCGACCGCATGTTGCTGGTTCATTCACCTTGTCCTGATTGTTGATAAAATATTACTTTCA TTTTCGATGGTCTAATTGTCCAAACTCTTCCTCTTATTCAGATACTGTAAATCATTTGTT GTGTGTCATTGATATGAAATAAACATCAAAAGTTTCTCAATCAATGATGACCATCTTATA CCAGATACAATAGTATCATTCTTATTTTTTTTTAAGCGATGTTTTTTTGTGTAATTAGCA TCCTCAACACTTCATGAAGTTATATTTGGTAACAAGGTCTTGTTATTTTAGACGTAATTT GTTAGACACTGAATTGATGGTTCCTCTTGATGTTCTCTCCTTTTCTCTGTTGTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10635#1      ------------------------------------------------------------
consensus_10635#2      ------------------------------------------------------------
consensus_10635#0      CTACGGGCCAANAATTCGGCACGAGGGGCACATTCAAATTAGTCTTCTTCACGTTGGTTG 60
                                                                                   

consensus_10635#1      ------------------------------------------------------------
consensus_10635#2      ------------------------------------------------------------
consensus_10635#0      GTTATGCCTAAAAATAAAGGAAAGGGAGGAAAGAATCGACGTCGAGGAAAGAACGAGAAT 120
                                                                                   

consensus_10635#1      ------------------------------------------------------------
consensus_10635#2      ------------------------------------------------------------
consensus_10635#0      GAAAGTCAGAAACGCGACTTGATATATAAAGAAGCTGGTCAAGAATATGCAAAAGTTGAA 180
                                                                                   

consensus_10635#1      ------------------------------------------------------------
consensus_10635#2      ------------------------------------------------------------
consensus_10635#0      CGCCTTCTAGGCAATGGTCGATTGGAGGCCTATTGTTTCGACGGTGTAAAAAGGCTGTGT 240
                                                                                   

consensus_10635#1      ------------------------------------------------------------
consensus_10635#2      ------------------------------------------------------------
consensus_10635#0      CATATTCGTGGAAAGTTGCGCAAAAAAGTATGGATCAGTAATGGTGATATCATTTTAATT 300
                                                                                   

consensus_10635#1      ------------------------------------------------------------
consensus_10635#2      ------------------------------------------------------------
consensus_10635#0      GGTTTACGAGATTATCAAGACAATAAAGCCGATGTGATTATGAAATATTTGAATGATGAA 360
                                                                                   

consensus_10635#1      ------------------------------------------------------------
consensus_10635#2      ------------------------------------------------------------
consensus_10635#0      GCTAGAACTCTTAAATCATTAGGAGAGATTCCTGACACTATAAAATTAGAAGAGAATGAT 420
                                                                                   

consensus_10635#1      ------------------------------------------------------------
consensus_10635#2      ------------------------------------------------------------
consensus_10635#0      GATATTGAATTCGATGCCAATGCTGCCATCTTCGAAGATGATGAAGATGATGAAAAAGGA 480
                                                                                   

consensus_10635#1      ---------------GAGGAAGGCTCAGATGATGATGATGCTGATGACACCAGTGATGAT 45
consensus_10635#2      ------------------------------------------------------------
consensus_10635#0      TCAGACTCCGAAGATGAGGAAGGCTCAGATGATGATGATGCTGATGACAACAGTGATGAT 540
                                                                                   

consensus_10635#1      TCTGATGAGATTGCAGAAATCAACCAACGATATCGAGCTGATACTGGTATCGGTAAAGAT 105
consensus_10635#2      -----TGAGATTGCAGAAATCAACCAACGATATCGAGCTGATACTGGTATCGGTAAAGAT 55
consensus_10635#0      TCTGATGAGATTGCAGAAATCAACCAACGATATCGAGCTGATACTGGTATCGGTAAAGAT 600
                            *******************************************************

consensus_10635#1      CAGCGAAATAATCGTCGAAGATAGTTGGTGTTTCTTTTTAATTGTGGTTTTCTTGTTAAA 165
consensus_10635#2      CAGCGAAATAATCGTCGAAGATAGTTGGTGTTTCTTTTTAATTGTGGTTTTCTTGTTAAA 115
consensus_10635#0      CAGCGAAATAATCGTCGAAGATAGTTGGTGTTTCTTTTTAATTGTGGTTNTCTTGTTAAA 660
                       ************************************************* **********

consensus_10635#1      GCCATTCGACCGCATGTTGCTGGTT------------------------------ATTAC 195
consensus_10635#2      GCCATTCGACCGCATGTTGCTGGTTCATTCACCTTGTCCTGATTGTTGATAAAATATTAC 175
consensus_10635#0      GCCATTCGACCGCATGGTGCTGGTT------------------------------ATTAC 690
                       **************** ********                              *****

consensus_10635#1      TTTCATTTTCGATGGTCTAATTGTCCAAACTCTTCCTCTTATTCAGATACTGTAAATCAT 255
consensus_10635#2      TTTCATTTTCGATGGTCTAATTGTCCAAACTCTTCCTCTTATTCAGATACTGTAAATCAT 235
consensus_10635#0      TTTCATTNTCGATGGTCTAATTGCCAAANCTCTNNNCTCTATC--AATACTGNAAATCAT 748
                       ******* *************** * ** ****      ***    ****** *******

consensus_10635#1      TTGTTGTGTGTCATTGATATGAAATAAACATCAAAAGTTTCTCAATCAATGATGACCATC 315
consensus_10635#2      TTGTTGTGTGTCATTGATATGAAATAAACATCAAAAGTTTCTCAATCAATGATGACCATC 295
consensus_10635#0      TTTGTGNGTGTCATTGATATGAAATAA-CATCAAAGTTNNCTCATC--ATGATGACCATC 805
                       **  ** ******************** *******  *  ****    ************

consensus_10635#1      TTATACCAGATACAATAGTATCATTCTTATTTTTTTTTAAGCGATGTTTTTTTGTGTAAT 375
consensus_10635#2      TTATACCAGATACAATAGTATCATTCTTATTTTTTTTTAAGCGATGTTTTTTTGTGTAAT 355
consensus_10635#0      T-ATAC-AGATACA-TAGTATCATTCTAATTTTTTTT--AGCGA-ATGTTTTTGGGTAAT 859
                       * **** ******* ************ *********  *****  * ****** *****

consensus_10635#1      TAGCATCCTCAACACTTCATGAAGTTATATTTGGTAACAAGGTCTTGTTATTTTAGACGT 435
consensus_10635#2      TAGCATCCTCAACACTTCATGAAGTTATATTTGGTAACAAGGTCTTGTTATTTTAGACGT 415
consensus_10635#0      -AGCATCCTCA-CACTT-ATGAAGT-ATATTTGGTAACAGG--TCTGTTAT--TAGACGT 911
                        ********** ***** ******* ************* *    ******  *******

consensus_10635#1      AATTTGTTAGACACTGAATTGATGGTTCCTCTTGATGTTCTCTCCTTTTCTCTGTTCATT 495
consensus_10635#2      AATTTGTTAGACACTGAATTGATGGTTCCTCTTGATGTTCTCTCCTTTTCTCTGTTGTG- 474
consensus_10635#0      ANTN--GTAGAC-CTGA--TGAGGNNNNCTTGAGGTCTTCCTTTCCTGGCATT-TCCAAA 965
                       * *    ***** ****  *** *    **   * * ***  * * *  *  * *     

consensus_10635#1      TTTCTCAATTTGTCTTTATTTTCTTTTAGTCGTGATCTTTTCAAAGCAATAAGTATGTTG 555
consensus_10635#2      ------------------------------------------------------------
consensus_10635#0      TGGCT--ATTTCTTTANNCGGACTTAAAGCCAAGTT------------------------ 999
                                                                                   

consensus_10635#1      GTCAGTTAGAGAATTTCGTTTTGTTATTTTAAAACTGTANAATGGCTGGGGAATATAAAT 615
consensus_10635#2      ------------------------------------------------------------
consensus_10635#0      ------------------------------------------------------------
                                                                                   

consensus_10635#1      ATGGTTATGAC 626
consensus_10635#2      -----------
consensus_10635#0      -----------
                                  




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)