These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10636#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1224 fasta sequence [TTAATTATTTGTTGAATTAAAGCTCATGGATCACATTGCTTTTTTTCAGCTATGGGATNTAAGAGATGGCCAATGTAAGCAAACATTTCCAGGCCATGAATCTGATATCAATGCTATTATCTATTTTCCTAACGGGATGTCATTTGCTACAGGTAGTGATGATGCTACTTGTCGCCTATTTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTATCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGTGGATACGATGATTTTAACTGCAATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTCTAGCGGGTCATGATAACCGCGTTTCTTGTCTCGGTGTTTCCGAAGATGGAATGGCAGTATGTACGGG-GTCGTG-GGATAG-CTTTCTAAGAATATGGAATTAAATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAATATAAATACAGCC---GATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTAGGTTTATTTCCCTGGACTGATCTACCTACAGCTTTATTTTCAATATATTTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTATTTAAGCTTAACGTTGTTCTAAAACTT-CCTTACTATTATAACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAATTTTAATTGTATGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATATTATTATTTT-CCCTTTCACTCCGAGTTATTGCGCCAAATACACGCTTTTGTTGCGCATATTATTTTTTATTGTTGTTTTGCAAATTATGGATGCTTTTTTTATAGTCCTGCTCCCTCCTTGTAAAGCTGACTTATGCCTAATTTTCTGG-TTTGTTTATTTAATTTGGCTTTTTGTATATTTATGAAACTAGTCATTTCTTATTCCCCCGTTTATACATATGCATAAAATGCCCTTTGG-ATTATAATATGCC-TTCATGTTTCAATGTTTCTTTTTATTTT-AATCAGTTTATGTTAGGAATACAATTGG-AATTTCTCTGAGTGTTATTTTCCAAAATTATTTGTAATTAAATAATTACT-GGGTGTGTTTAGATAACATTTATTGCTTTTCATAAATTGGT] [-] EMBL CD132708 [TTAATTATTTGTTGAATTAAAGCTCATGGATCACATTGCTTTTTTTCAGCTATGGGATNTAAGAGATGGCCAATGTAAGCAAACATTTCCAGGCCATGAATCTGATATCAATGCTATTATCTATTTTCCTAACGGGATGTCATTTGCTACAGGTAGTGATGATGCTACTTGTCGCCTATTTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTATCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGTGGATACGATGATTTTAACTGCAATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTCTAGCGGGTCATGATAACCGCGTTTCTTGTCTCGGTGTTTCCGAAGATGGAATGGCAGTATGTACGGG GTCGTG GGATAG CTTTCTAAGAATATGGAATTAAATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAATATAAATACAGCC GATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTgg ] [+] EMBL CD080496 [ CGGGATGTCATTTGCTACAGGTAGTGATGATGCTACTTGTCGCCTATTTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTATCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGTGGATACGATGATTTTAACTGCAATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTCTAGCGGGTCATGATAACCGCGTTTCTTGTCTCGGTGTTTCCGAAGATGGAATGGCAGTATGTACGGG GTCGTG GGATAG CTTTCTAAGAATATGGAATTAAATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAATATAAATACAGCC GATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTAGGTTTATTTCCCTGGACTGATCTACCTACAGCTTTATTTTCAATATATTTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTATTTAAGCTTAACGTTGTTCTAAAACTT CCTTACTATTATAACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTAC AATTNTAANTGTATG ] [+] EMBL CD127114 [ GGATGTCATTTGCTACAGGTAGTGATGATGCTACTTGTCGCCTATTTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTATCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGAGGATACGATGATTTTAACTGCAATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTCTAGCGGGTCATGATAACCGCGTTTCTTGTCTCGGTGTTTCCGAAGATGGAATGGCAGTATGTACGGG GTCGTG GGATAG CTTTCTAAGAATATGGAATTAAATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAATATAAATACAGCC GATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTAGGTTTATTTCCCT ] [+] EMBL CD183000 [ GAATGGCAGTATGTACGGG GTCGTG GGATAG CTTTCTAAGAATATGGAATTAAATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAATATAAATACAGCC GATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTAGGTTTATTTCCCTGGACTGATCTACCTACAGCTTTATTTTCAATATATTTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTATTTAAGCT ] [+] EMBL CD082252 [ TGGCAGTATGTACGGGNGTCGTGNGGATAGTTTTTCTAAGAATATGGAACTAAATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAATATAAATACAGCC GATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTAGGTTTATTTCCCTGGACTGATCTACCTACAGCTT TTTTCAATATATTTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTA TTAAGCTTAACGTTGTTCTAAAACTT CCTTACTATTATAACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAATTTTAATTGTATGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATATTATTATTTT CCCTTTCACTCCGAGTTATTGCGCCAAATACACGCTTTTGTTGCGCATATTATTTTTTATTGTTGTTTTGCAAATTATGGATGCTNTTTTTATAGTCCTGCTCCCTTC TGTAAAGCTGACTTATGCCTAATTNTCTGGNTTNNGTTATNTAAATTGGGCTTTTGTATATTTATGAAACTAGTCATTTCTTATTCCNNCGTTNATACATATGCATAAAATGCCCTTTGGNNATAT ATATGCCNNTCATGTTCAAATG TTCTTTTTATTTTAAATCAG TTATGNTAGGAATACANTNGGAAAATTCTCTGAGTG TATTTTCCAAAANTA TTGT ANTAANTAATTACTGGGGTGTGTTTAGAT ACATTTAT ] [+] EMBL CD178300 [ CAGTATGTACGGG GTCGTG GGATAG CTTTCTAAGAATATGGAATTAAATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAAT TAAATACAGCCGATGATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTAGGTTTATTTCCCTGGACTGATCTACCTACAGCTTTATTTTCAATATATTTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTATTTAAGCTTAACGTTGTTCTAAAACTT CCTTACTATTATAACTAGTATATGAACTTAAAGCATNTCTTCGCTTCTACTTATGGCCCAACCCATTACAAATNTTAATTGTATGAATCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATAT ] [-] EMBL CD074406 [ CTGTTATTAATGGTNNTAGGTTTATTTCCCTGGACTGATCTACCTACAGCTTTATTTTCAATATATTTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTATTTAAGCTTAACGTTGTTCTAAAACTT CCTTACTATTATAACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAATTTTAATTGTATGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATATTATTATTTT CCCTTTCACTCCGAGTTATTGCGCCAAATACACGCTTTTGTTGCGCATATTATTTTTTATTGTTGTTTTGCAAATTATGGATGCTTTTTTTATAGTCCTGCTCCCTCCTTGTAAAGCTGACTTATGCCTAATTTTCTGG TTTGTTTATTTAATTTGGCTTTTTGTATATTTATGAAACTAGTCATTTCTTATTCCCCCGTTTATACATATGCATAAAATGCCCTTTGG ATTATAATATGCC TTCATGTTTCAATGTTTCTTTTTATTTT AATCAGTTTATGTTAGGAATACAATTGG AATTTCTCTGAGTGTTATTTTCCAAAATTATTTGTAATTAAATAATTACT GGGTGTGTTTAGATAACATTTATTGCTTTTCATAAATTGGT] [-] EMBL CD185990 [ TTAATGGTTTTAGGTTTATTTCCCTGGACTGATCTACCTACAGCTTTATTTTCAATATATTTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTATTTAAGCTTAACGTTGTTCTAAAACTT CCTTACTATTATAACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAATTTTAATTGTATGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATATTATTATTT ] [-] EMBL CD141319 [ AAT GTTTTAGGTTTATTCCCCTGGACTGATCTACCTACAGCTTT TTTTCAATATA TTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTATTTAAGCTTAACGTTGTTCTAAAACTT CCTTACTATTATAACTAGTATATGAACTCAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAATTTTAACAGTATGATTCgatgta ] [-] EMBL CD076508 [ TACAGCTTTATTTTCAATATATTTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTATTTAAGCTTAACGTTGTTCTAAAACTT CCTTACTATTATAACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAATTTTAATTGTATGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATATTATTATTTT CCCTTTCACTCCGAGTTATTGCGCCAAATACACGCTTTTGTTGCGCATATTATTTTTTATTGTTGTTTTGCAAATTATGGATGCTTTTTTTATAGTCCTGCTCCCTCCTTGTAAAGCTGACTTATGCCTAATTTTCTGG TTTGTTTATTTAATTTGGCTTTTTGTATATTTATGAAACTAGTCATTTCTTATTCCCCCGTTTATACATATGCATAAAATGCCCTTTGG ATTATAATATGCC TTCATGTTTCAATGTTTCTTTTTATTTT AATCAGTTTATGTTAGGAATACAATTGG AATTTCTCTGAGTGTTATTTTCCAAAATTATTTGTAATTAAATAATTACT GGGTGTGTTTAGATAACATTTATT ] [-] EMBL CD075859 [ CTAAAACTTCCCTTACTATTATAACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAATTTTAATTGTATGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATATTATTATTTT CCCTTTCACTCCGAGTTATTGCGCCAAATACACGCTTTTGTTGCGCATATTATTTTTTATTGTTGTTTTGCAAATTATGGATGCTTTTTTTATAGTCCTGCTCCCTCCTTGTAAAGCTGACTTATGCCTAATTTTCTGG TTTGTTTATTTAATTTGGCTTTTTGTATATTTATGAAACTAGTCATTTCTTATTCCCCCGTTTATACATATGCATAAAATGCCCTTTGG ATTATAATATGCC TTCATGTTTCAATGTTTCTTTTTATTTT AATCAGTTTATGTTAGGAATACAATTGG AATTTCTCTGAGTGTTATTTTCCAAAATTATTTGTAATTAAATAATTACT GGGTGTGTTTAGATAACATTTATT ] [-] EMBL CD182988 [ AATTGTATGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGGTGGTGATAATAATATTTT CCCCTTCACTCCCAGGTATTGCGCCAAATACACGCTTTTGTTGCGCATAATATTTTTTATTGGTGTTTTGCAAATTATGGATGCTTTTTTTATAGTCCTGCTCCCTCCTccca ] [+] EMBL BE505151 [ TGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATATTATTATTTTNCCCNTTCACTCCGAGTTATTGCGCCAAATACACGCTTTTGTTGCGCATATTATTTTTTATTGTTGTTTTGCAAATTATGGATGCTTTTTTTATAGTCCTGCTCCCTCCTTGTAAAGCTGACTTATGCCTAATTTTCTGG TTTGTTTATTTAATTTGGCTTT ] consensusID : consensus_10636#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1180 fasta sequence [TTCTTAAACACCTGCGATGTTGGTGAAGTTTAGTGACTAGCTTGTTTGGTGTATTGGACCAGATCTTTATCATAACTAAAAATGGGTGAACTAGATCAGCTGCGTCAGGAAACAGAACAGCTTAAAAGTCAAATTAGAGAGGCACGGAGAGTTGCAGCTGATACTACATTACAACAGGCAACGGTTAATGTGGAGTATATCAGTCGTACTCAGTTGCGCAGCAGACGGACATTACGTGGACACTTGGCAAAAATTTATGCTATGCACTGGTGCTCAGATTCCCGAAACTTAGTTTCAGCTCCTCAGGACGGGAAGTTAATAGTATGGGATGGATATACTACCAACAAAGTTCATGCCATTCCTTTGAGGAGCAGTTGGGTCATGACATGCGCCTACTCTCCATCCGGAAATTATGTAGCCTGTGGTGGTTTAGACAATATATGTTCAATCTATAGCCTCAAGACTAGAGAAGGTAACGTTCGAGTTAGTCGAGAACTCCCTGGTCATACTGGTTATTTATCATGTTGTCGTTTCGTGAATGATAGTCAGATAGTTACAACTTCAGGTGATGGTACTTGCGCTCTTTGGGATATCGAGACTGGTCAACAAATCGCCTCATTTACAGGGCACACAGGTGATGTAATGAGCTTAAGTTTAGCACCTAATCTCCAAACATTTATTTCGGGTGCATGTGATGCTTCTGCAAAGCTATGGGATTTAAGAGATGGCCAATGTAAGCAAACATTTCCAGGCCATGAATCTGATATCAATGCTATTATCTAGTTTTTCCCCCCTTGATGTCATTTGCTACAGGTAGTGATGATGCTACTTGTCGCCTATTTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTATCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGTGGATACGATGATTTTAACTGCAATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTCTAGCGGGTCATGATAACCGCGTTTCTTGTCTCGGTGTTTCCGAAGATGGAATGGCAGTATGTACGGGGTCGTGGGATAGCCTTCTAAGAATATGGAATTAAATAACGTTNTAACGTAACAATACTGGCACAACTCTNTCAATATAAATACAGCCGATTGCCAAACATTCAACACA] [-] EMBL CD128736 [TTCTTAAACACCTGCGATGTTGGTGAAGTTTAGTGACTAGCTTGTTTGGTGTATTGGACCAGATCTTTATCATAACTAAAAATGGGTGAACTAGATCAGCTGCGTCAGGAAACAGAACAGCTTAAAAGTCAAATTAGAGAGGCACGGAGAGTTGCAGCTGATACTACATTACAACAGGCAACGGTTAATGTGGAGTATATCAGTCGTACTCAGTTGCGCAGCAGACGGACATTACGTGGACACTTGGCAAAAATTTATGCTATGCACTGGTGCTCAGATTCCCGAAACTTAGTTTCAGCTCCTCAGGACGGGAAGTTAATAGTATGGGATGGATATACTACCAACAAAGTTCATGCCATTCCTTTGAGGAGCAGTTGGGTCATGACATGCGCCTACTCTCCATCCGGAAATTATGTAGCCTGTGGTGGTTTAGACAATATATGTTCAATCTATAGCCTCAAGACTAGAGAAGGTAACGTTCGAGTTAGTCGAGAACTCCCTGGTCATACTGGTTATTTATCATGTTGTCGTTTCGTGAATGATAGTCAGATAGTTACAACTTCAGGTGATGGTACTTGCGCTCTTTGGGATATCGAGACTGGTCAACAAATCGCCTCA ATACAGGGCACACAGGTGATG ] [+] EMBL CD184269 [ ATTATGTAGCCTGTGGTGGTTTAGACAATATATGTTCAATCTATAGCCTCAAGACTAGAGAAGGTAACGTTCGAGTTAGTCGAGAACTCCCTGGTCATACTGGTTATTTATCATGTTGTCGTTTCGTGAATGATAGTCAGATAGTTACAACTTCAGGTGATGGTACTTGCGCTCTTTGGGATATCGAGACTGGTCAACAAATCGCCTCATTTACAGGGCACACAGGTGATGTAATGAGCTTAAGTTTAGCACCTAATCTCCAAACATTTATTTCGGGTGCATGTGATGCTTCTGCAAAGCTATGGGATTTAAGAGATGGCCAATGTAAGCAAACATTTCCAGGCCATGAATCTGATATCAATGCTATTATCTAGTTTTTCCCCCCTT ] [+] EMBL CD082924 [ AGGTGATGGTACTTGCGCTCTTTGGGATATCGAGACTGGTC ACAAATCGCCTCATTTACAGGGCACACAGGTGATGTAATGAGCTTAAGTTTAGCACCTAATCTCCAAACATTTATTTCGGGTGCATGTGATGCTTCTGCAAAGCTATGGGATTTAAGAGATGGCCAATGTAAGCAAACATTTCCAGGCCATGAATCTGATATCAATGCTATTATCTA TTTTCCTAACGGGATGTCATTTGCTACAGGTAGTGATGATGCTACTTGTCGCCTATTTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTATCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGTGGATACGATGATTTTAACTGCAATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTCTAGCGGGTCATGATAACCGCGTTTCTTGTCTCGGTGTTTCCGAAGATGGAATGGCAGTATGTACGGGGTCGTGGGATAGCCTTCTAAGAATATGGAATTAAATAACGTTNTAACGTAACAATACTGGCACAACTCTNTCAATATAAATACAGCCGATTGCCAAACATTCAACACA] consensusID : consensus_10636#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 480 fasta sequence [CNGTTGTTCTAAAACTTCCTTACTATTATAACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAATTTTAATTGTATGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATATTATTATTTTCCCTTTCACTCCGAGTTATTGCGCCAAATACACGCTTTTGTTCGCGCATATTATTTTTTATTGTTGTTTTGCAAATTATGGATGCTTTTTTTATAGTCCTGCTCCCTCCTTGTAAAGCTGACTTATGCGTAATTTTATGGTATGTACGGGGTCGTGGGATAGCTTTCTAAGAATATGGAATTAAATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAATATAAATACAGCCGATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTAG] [-] EMBL CD190094 [CNGTTGTTCTAAAACTTCCTTACTATTATAACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAATTTTAATTGTATGATTCATCCGTTTGTTCATTGAGACTGTACTGTTTGTTGTTGTTGATATTATTATTTTCCCTTTCACTCCGAGTTATTGCGCCAAATACACGCTTTTGTTCGCGCATATTATTTTTTATTGTTGTTTTGCAAATTATGGATGCTTTTTTTATAGTCCTGCTCCCTCCTTGTAAAGCTGACTTATGCGTAATTTTATGGTATGTACGGGGTCGTGGGATAGCTTTCTAAGAATATGGAATTAAATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAATATAAATACAGCCGATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTAG] consensusID : consensus_10636#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 447 fasta sequence [ATGTCATCTGCTACAGGTAGTGATGATGCTACTTGTCGCCTATTTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTATCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGTGGATACGATGATTTTAACTGCTATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTATAGCGGGTCATGATAACCGCGTTTTCTGTTTCGGTGTTTCAGAAGATGGAATGGCAGTATGTACGGGGTCTGTTGGATAGCTTTATAATAATATGATATTCAATAACGTTTAGAAGTAACAATACTCGCGCGACTCTTTCAATATATATACAACAGATAGCCAACTATTTCTACTCAGTATGAGTCCTTATATATTTTCTTTGAATACACTTTCTTCGCGCATGTCATTATTGCTTTTA] [-] EMBL CD141995 [ATGTCATCTGCTACAGGTAGTGATGATGCTACTTGTCGCCTATTTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTATCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGTGGATACGATGATTTTAACTGCTATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTATAGCGGGTCATGATAACCGCGTTTTCTGTTTCGGTGTTTCAGAAGATGGAATGGCAGTATGTACGGGGTCTGTTGGATAGCTTTATAATAATATGATATTCAATAACGTTTAGAAGTAACAATACTCGCGCGACTCTTTCAATATATATACAACAGATAGCCAACTATTTCTACTCAGTATGAGTCCTTATATATTTTCTTTGAATACACTTTCTTCGCGCATGTCATTATTGCTTTTA] consensusID : consensus_10636#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 337 fasta sequence [CGAGGANCANTTTCANCACAGNNTGNGNCCNNATTTATTTNCTTTGGATAAACTTNCTTCGGCCTGTTATTAATGGGNNTAGGTTTATTTCCCTGGACTGATCTACCTACAGCTTTNTTNTCAATATATTCCCTCGAAAAAATAGGTTAACTNCATCAAAGGAATTATTTANGCTNAACGTNGTTCTANAACTTCCTNACTATNATAACTAGNATATGAACTTAAAGCANTNCTTGGGTNCTACTTATGGGCCAACCCATTACAAATTCTTANNTGGTATGATTCAACCGCTTGGTCAACGGAGACTNTNCTGTCNGGNGGTGGTGGATATTTATTA] [+] EMBL SM4091 [CGAGGANCANTTTCANCACAGNNTGNGNCCNNATTTATTTNCTTTGGATAAACTTNCTTCGGCCTGTTATTAATGGGNNTAGGTTTATTTCCCTGGACTGATCTACCTACAGCTTTNTTNTCAATATATTCCCTCGAAAAAATAGGTTAACTNCATCAAAGGAATTATTTANGCTNAACGTNGTTCTANAACTTCCTNACTATNATAACTAGNATATGAACTTAAAGCANTNCTTGGGTNCTACTTATGGGCCAACCCATTACAAATTCTTANNTGGTATGATTCAACCGCTTGGTCAACGGAGACTNTNCTGTCNGGNGGTGGTGGATATTTATTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10636#0 ------------------------------------------------------------ consensus_10636#4 ------------------------------------------------------------ consensus_10636#2 ------------------------------------------------------------ consensus_10636#1 TTCTTAAACACCTGCGATGTTGGTGAAGTTTAGTGACTAGCTTGTTTGGTGTATTGGACC 60 consensus_10636#3 ------------------------------------------------------------ consensus_10636#0 ------------------------------------------------------------ consensus_10636#4 ------------------------------------------------------------ consensus_10636#2 ------------------------------------------------------------ consensus_10636#1 AGATCTTTATCATAACTAAAAATGGGTGAACTAGATCAGCTGCGTCAGGAAACAGAACAG 120 consensus_10636#3 ------------------------------------------------------------ consensus_10636#0 ------------------------------------------------------------ consensus_10636#4 ------------------------------------------------------------ consensus_10636#2 ------------------------------------------------------------ consensus_10636#1 CTTAAAAGTCAAATTAGAGAGGCACGGAGAGTTGCAGCTGATACTACATTACAACAGGCA 180 consensus_10636#3 ------------------------------------------------------------ consensus_10636#0 ------------------------------------------------------------ consensus_10636#4 ------------------------------------------------------------ consensus_10636#2 ------------------------------------------------------------ consensus_10636#1 ACGGTTAATGTGGAGTATATCAGTCGTACTCAGTTGCGCAGCAGACGGACATTACGTGGA 240 consensus_10636#3 ------------------------------------------------------------ consensus_10636#0 -----------------------------------TTAATTATTTGTTGAATTAAAGCTC 25 consensus_10636#4 ------------------------------------------------------------ consensus_10636#2 ------------------------------------------------------------ consensus_10636#1 CACTTGGCAAAAATTTATGCTATGCACTGGTGCTCAGATTCCCGAAACTTAGTTTCAGCT 300 consensus_10636#3 ------------------------------------------------------------ consensus_10636#0 ATGGATCACATTGCTTTTTTTCAGCTATGGGATNTAAGAGATGGCCAATGTAAGCAAACA 85 consensus_10636#4 ------------------------------------------------------------ consensus_10636#2 ------------------------------------------------------------ consensus_10636#1 CCTCAGGACGGGAAGTTAATAGTATGGGATGGATATACTACCAACAAAGTTCATGCCATT 360 consensus_10636#3 ------------------------------------------------------------ consensus_10636#0 TTTCCAGGCCATGAATCTGATATCAATGCTATTATCTATTTTCCTAACGGGATGTCATTT 145 consensus_10636#4 ------------------------------------------------------------ consensus_10636#2 ------------------------------------------------------------ consensus_10636#1 CCTTTGAGGAGCAGTTGGGTCATGACATGCGCCTACTCTCCATCCGGAAATTATGTAGCC 420 consensus_10636#3 ------------------------------------------------------------ consensus_10636#0 GCTACAGGTAGTGATGATGCTACTTGTCGCCTATTTGATATACGTTCTGACCAAGAAGTT 205 consensus_10636#4 ------------------------------------------------------------ consensus_10636#2 ------------------------------------------------------------ consensus_10636#1 TGTGGTGGTTTAGACAATATATGTTCAATCTATAGCCTCAAGACTAGAGAAGGTAACGTT 480 consensus_10636#3 ------------------------------------------------------------ consensus_10636#0 GGAATGTATAGCCATGATAATATTATATGTGGTATCACAAGTGTAGCTTTTAGCAAAAGT 265 consensus_10636#4 ------------------------------------------------------------ consensus_10636#2 ------------------------------------------------------------ consensus_10636#1 CGAGTTAGTCGAGAACTCCCTGGTCATACTGGTTATTTATCATGTTGTCGTTTCGTGAAT 540 consensus_10636#3 ------------------------------------------------------------ consensus_10636#0 GGTCGACTTCTACTCGGTGGATACGATGATTTTAACTGCAATATTTGGGACACATTAAAA 325 consensus_10636#4 ------------------------------------------------------------ consensus_10636#2 ------------------------------------------------------------ consensus_10636#1 GATAGTCAGATAGTTACAACTTCAGGTGATGGTACTTGCGCTCTTTGGGATATCGAGACT 600 consensus_10636#3 ------------------------------------------------------------ consensus_10636#0 CAGGAACGTTGTGGCGTTCTAGCGGGTCATGATAACCGCGTTTCTTGTCTCGGTGTTTCC 385 consensus_10636#4 ------------------------------------------------------------ consensus_10636#2 ------------------------------------------------------------ consensus_10636#1 GGTCAACAAATCGCCTCATTTACAGGGCACACAGGTGATGTAATGAGCTTAAGTTTAGCA 660 consensus_10636#3 ------------------------------------------------------------ consensus_10636#0 GAAGATGGAATGGCAGTATGTACGGGGTCGTGGGATAGCTTTCTAAGAATATGGAATTAA 445 consensus_10636#4 ------------------------------------------------------------ consensus_10636#2 ------------------------------------------------------------ consensus_10636#1 CCTAATCTCCAAACATTTATTTCGGGTGCATGTGATGCTTCTGCAAAGCTATGGGATTTA 720 consensus_10636#3 ------------------------------------------------------------ consensus_10636#0 ATAACGTTTTAACGTAACAATACTGGCACAACTCTTTCAATATAAATACAGCCGATTGCC 505 consensus_10636#4 -------------------------------------------------------CGAGG 5 consensus_10636#2 ------------------------------CNGTTGTTCTAAAACTTCCTTACTATTATA 30 consensus_10636#1 AGAGATGGCCAATGTAAGCAAACATTTCCAGGCCATGAATCTGATATCAATGCTATTATC 780 consensus_10636#3 ------------------------------------------------------------ consensus_10636#0 AACAATTTCAACACAGTATGAGTCCTTATTTATTTTCTT-TGCATAAACTTTCTTCGGCC 564 consensus_10636#4 ANCANTTTCANCACAGNNTGNGNCCNNATTTATTTNCTT-TGGATAAACTTNCTTCGGCC 64 consensus_10636#2 ACTAGTATATGAACTTAAAGCATTTCTTTGCTTCTACTTATGGCCCAACCCATTACAAAT 90 consensus_10636#1 TAGTTTTTCCCCCCTTGATGTCATTTGCTACAGGTAGTGATGATGCTACTTGTCGCCTAT 840 consensus_10636#3 -----------------ATGTCATCTGCTACAGGTAGTGATGATGCTACTTGTCGCCTAT 43 * * * * ** ** * consensus_10636#0 TGTTATTA---ATGGTTTTAG--GTTTATTTCCCTGGAC-TGATCTACCTACAGCT-TTA 617 consensus_10636#4 TGTTATTA---ATGGGNNTAG--GTTTATTTCCCTGGAC-TGATCTACCTACAGCT-TTN 117 consensus_10636#2 TTTAATTG---TATGATTCATCCGTTTGTTCATTGAGAC-TGTACTGTTTGTTGTTGTTG 146 consensus_10636#1 TTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTA 900 consensus_10636#3 TTGATATACGTTCTGACCAAGAAGTTGGAATGTATAGCCATGATAATATTATATGTGGTA 103 * * * * *** * * ** * * * consensus_10636#0 TTTTCAATATATTTCCTCGAAAAAATAGGTTAACTTCATTAAAGGAATTATTTAAGCTTA 677 consensus_10636#4 TTNTCAATATATTCCCTCGAAAAAATAGGTTAACTNCATCAAAGGAATTATTTANGCTNA 177 consensus_10636#2 ATATTATTATTTTCCCTTTCAC--TCCGAGTTATTGCGCCAAATACACGCTTTTGTTCGC 204 consensus_10636#1 TCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGTGGATACGATGATTTTA 960 consensus_10636#3 TCACAAGTGTAGCTTTTAGCAAAAGTGGTCGACTTCTACTCGGTGGATACGATGATTTTA 163 * * * * * * * * * consensus_10636#0 AC-GTTGTTCTAAAACTTCCTTACTATTATAACTAGTATATGAACTTAAAG--CATTTCT 734 consensus_10636#4 AC-GTNGTTCTANAACTTCCTNACTATNATAACTAGNATATGAACTTAAAG--CANTNCT 234 consensus_10636#2 GC-ATATTATTTTTTATTGTTG--TTTTGCAAATTATGGATGCTTTTTTTA--TAGTCCT 259 consensus_10636#1 ACTGCAATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTCTAGCGGGTCATGATA 1020 consensus_10636#3 ACTGCTATATTTGGGACACATTAAAACAGGAACGTTGTGGCGTTATAGCGGGTCATGATA 223 * * * * ** * * * consensus_10636#0 TTGCTTCTACTTATGG-CCCAACCCAT--TACAAATTTTAATT--GTATGATTCA-TCCG 788 consensus_10636#4 TGGGTNCTACTTATGG-GCCAACCCAT--TACAAATTCTTANNTGGTATGATTCA-ACCG 290 consensus_10636#2 -GCTCCCTCCTTGTAAAGCTGACTTATG-CGTAATTTTATGGTATGTACGGGGTC-GTGG 316 consensus_10636#1 ACCGCGTTTCTTGTCTCGGTGTTTCCGAAGATGGAATGGCAGTATGTACGGGGTC-GTGG 1079 consensus_10636#3 ACCGCGTTTTCTGTTTCGGTGTTTCAGAAGATGGAATGGCAGTATGTACGGGGTCTGTTG 283 * * * * *** * * consensus_10636#0 TTTGTTCATTG-AGACTGTACTGTTTGTTGTTGTTGATATTAT-TATTTTCCCTTTCACT 846 consensus_10636#4 CTTGGTCAACGGAGACTNTNCTGTCNGGNGGTGGTGG-ATATT-TATTA----------- 337 consensus_10636#2 GATAGCTTTCTAAGAATATGGAATTAAATAACGTTTTAACGTAACAATACTGGCACAACT 376 consensus_10636#1 GATAGCCTTCTAAGAATATGGAATTAAATAACGTTNTAACGTAACAATACTGGCACAACT 1139 consensus_10636#3 GATAGCTTTATAATAATATGATATTCAATAACGTTTAGAAGTAACAATACTCGCGCGACT 343 * * * * * * * * * * * consensus_10636#0 CCGAGTTATTGCGCCAAATACACGCTTTTGTTGCGCATATTATTTTTTATTGTTGTTTTG 906 consensus_10636#4 ------------------------------------------------------------ consensus_10636#2 CTTTCAATATAAATACAGCCGATTGCCAACAATTTCAACACAGTATGAGTCCTTATTTAT 436 consensus_10636#1 CTNTCAATATAAATACAGCCGATTGCCAAACATT-CAACACA------------------ 1180 consensus_10636#3 CTTTCAATATATATACAACAGATAGCCAACTATTTCTACTCAGTATGAGTCCTTATATAT 403 consensus_10636#0 CAAATTATGGATGCTTTTTTTATAGTCCTGCTCCCTCCTTGTAAAGCTGACTTATGCCTA 966 consensus_10636#4 ------------------------------------------------------------ consensus_10636#2 TTTCTTTGCATAAACTTTCTTCGGCCTGTTATTAATGGTTTTAG---------------- 480 consensus_10636#1 ------------------------------------------------------------ consensus_10636#3 TTTCTTTGAATACACTTTCTTCGCGCATGTCATTATTGCTTTTA---------------- 447 consensus_10636#0 ATTTTCTGGTTTGTTTATTTAATTTGGCTTTTTGTATATTTATGAAACTAGTCATTTCTT 1026 consensus_10636#4 ------------------------------------------------------------ consensus_10636#2 ------------------------------------------------------------ consensus_10636#1 ------------------------------------------------------------ consensus_10636#3 ------------------------------------------------------------ consensus_10636#0 ATTCCCCCGTTTATACATATGCATAAAATGCCCTTTGGATTATAATATGCCTTCATGTTT 1086 consensus_10636#4 ------------------------------------------------------------ consensus_10636#2 ------------------------------------------------------------ consensus_10636#1 ------------------------------------------------------------ consensus_10636#3 ------------------------------------------------------------ consensus_10636#0 CAATGTTTCTTTTTATTTTAATCAGTTTATGTTAGGAATACAATTGGAATTTCTCTGAGT 1146 consensus_10636#4 ------------------------------------------------------------ consensus_10636#2 ------------------------------------------------------------ consensus_10636#1 ------------------------------------------------------------ consensus_10636#3 ------------------------------------------------------------ consensus_10636#0 GTTATTTTCCAAAATTATTTGTAATTAAATAATTACTGGGTGTGTTTAGATAACATTTAT 1206 consensus_10636#4 ------------------------------------------------------------ consensus_10636#2 ------------------------------------------------------------ consensus_10636#1 ------------------------------------------------------------ consensus_10636#3 ------------------------------------------------------------ consensus_10636#0 TGCTTTTCATAAATTGGT 1224 consensus_10636#4 ------------------ consensus_10636#2 ------------------ consensus_10636#1 ------------------ consensus_10636#3 ------------------ |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||