cluster # 10637

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10637 cluster # 10637 Sequences # 19 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10637#0 length = 1145 sequences # 8
consensus_10637#1 length = 745 sequences # 6

consensus_10637#2 length = 672 sequences # 2
consensus_10637#3 length = 478 sequences # 2
consensus_10637#4 length = 329 sequences # 1

consensusID : consensus_10637#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1145
fasta sequence

                              [CCCTCGNAGGCCAAAAATTCGGCACGAGGCAAATTATAATGATAATAATAATGATAATAATAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGTGATGAAAATGGTGATGATCATGGTGATTACGGTTATGATAGAAGAAAATCTACAAAAAGCCCGTTGAAAAAAAAATCAAGTCA-AAAAAACGAGAAGAATTACTATTCTACTGAATCAGATGATAATAGTAATAATGATGATTACTATAAACCAAATCATGAGAAATATAATTCACATAATAACAATAATAATAACGATAATGATGATGATGAAGGGAATTCGAATGACAACTACGGATATAGAAGAAAAACGAAAGGAAAAACACGAAAAACTAAACATAATAAAGAATCAGATGAAACAGATGAGAATGATGCTAATAATGATGATTCGCAC-AAAAAATATGCAACAAGTTATACACGAG-ACAAATATCCATCAAAG-AAAAAATACTCTTATAGTAAATATTACAGATCCAAAAACAATGCTGAGGGTGATGATGACGATGATGATAAAAATAAAGAATACAATCATAATCATAGGAAAAAATCTAAAAAAGTATCTAGACGAAAGAAAGAATATACAAAGAGTAATGACGATAGTGGTAATGAAGATAATGATAATGGAGAGAATGAATATCGTAGGAAATATAAGCCAGTTAGTAGGCGGAAAAAAAAGAATCCAAAGAGAACTACTCATAAGCGTAAAAACCACGAATCAGATGCCGACGACGATGTCTCACAGAGGAGACATTCTAAAAAGCATTCTAATAAATATAAATATGATAGTGACAGTGAAAAAGATGATGGTAATGATGATACTAGTCAGTAAACAGGTGACGGCATACAGTAATTAATCAGATATCATAATGACAAATTTAATATTTAAAAAATGATTTTTTTATCAAAACGATAAACAATTATTTCCTTTTTTTCTTGATAAAATGAAGTGGGAAGAGCAGTGTAATAAAAACCTTTTACTCAAGGATATAAAACTATAATATTTAGTTTAATGTACTCTAAGCAAACTAATAAAACCATTATACACCAATAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGT]

[+] EMBL CD080164             [CCCTCGNAGGCCAAAAATTCGGCACGAGGCAAATTATAATGATAATAATAATGATAATAATAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGTGATGAAAATGGTGATGATCATGGTGATTACGGTTATGATAGAAGAAAATCTACAAAAAGCCCGTTGAAAAAAAAATCAAGTCA AAAAAACGAGAAGAATTACTATTCTACTGAATCAGATGATAATAGTAATAATGATGATTACTATAAACCAAATCATGAGAAATATAATTCACATAATAACAATAATAATAACGATAATGATGATGATGAAGGGAATTCGAATGACAACTACGGATATAGAAGAAAAACGAAAGGAAAAACACGAAAAACTAAACATAATAAAGAATCAGATGAAACAGATGAGAATGATGCTAATAATGATGATTCGCAC AAAAAATATGCAACAAGTTATACACGAG ACAAATATCCATCAAAG AAAAAATACTCTTATAGTAAATATTACAGATCCAAAAACAATGCTGAGGGTGATGATGACGATGATGATAAAAATAAAGAATACAATCATAATCATAGGAAAAAATCTAAAAAAGTATCTAGACGAAAGAAAGAATATACAAAGAGTAATGACGATAGTGGTAATGAAGATAATGATAATGGAGAGAATGAATATCGTAGGAAATATAAGCCAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD062202             [                                                                                                                                                                                  gagAGACATAAAAAACGAGAAGAATTACTATTCTACTGAATCAGATGATAATAGTAATAATGATGATTACTATAAACCAAATCATGAGAAATATAATTCACATAATAACAATAATAATAACGATAATGATGATGATGAAGGGAATTCGAATGACAACTACGGATATAGAAGAAAAACGAAAGGAAAAACACGAAAAACTAAACATAATAAAGAATCAGATGAAACAGATGAGAATGATGCTAATAATGATGATTCGCACAAAAAAATATGCAACAAGTTATACACGAG ACAAATATCCATCAAAG AAAAAATACTCTTATAGTAAATATTACAGATCCAAAAACAATGCTGAGGGTGATGATGACGATGATGATAAAAATAAAGAATACAATCATAATCATAGGAAAAAATCTAAAAAAGTATCTAGACGAAAGAAAGAATATACAAAGAGTAATGACGATAGTGGTAATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD068318             [                                                                                                                                                                                                                                                                                                                                                                                                                   AGATGAGAATGATGCTAATAATGATGATTCGCAC ACCAAATATGCTACAAGTTATACACGAG ACAAATATCCATCAAAG AAAATATGCTCTTATAGTAAATATTACAGATCCAGAAACAATGCTGAGGGTGATGATGACGATGATGATAAAAATAAAGAATACAATCATAATCATAGGAAAAAATCTAAAAAAGTATCTAGACGAAAGAAAGAATATACAAAGAGTAATGACGATAGTGGTAATGAAGATAATGATAATGGAGAGAATGAATATCGTAGGACATATAAcacaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL SM7171               [                                                                                                                                                                                                                                                                                                                                                                                                                                 cgagTAATGATGATTCGNAC AAAAAATATGNAACAAGTTATACACGAGNACAAATATCCATCAAAGNAAAAAATACTCTTATAGTAAATATTACAGATCCAAAAACAATGCTGAGGGTGATGATGACGATGATGATAAAAATAAAGAATACAATCATAATCGTAGGAAAAAATCTAAAAAAGTATCTAGACGAAAGAAAGAATNTACANAGAGTAATGACGATAGTGGCAATGAAGATANTGATAATGGAGAGAATGANTATCGCAGGAAATATACGCCAGTCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD068022             [                                                                                                                                                                                                                                                                                                                                                                                                                                               TCGCAC AAAAAATATGCGACAAGTTATACACGAG ACGAATATCCATCAAAG AAAAAATACTCTTATAGTAAATATTACAGATCCAAAAACAATGCTGAGGGTGATGATGACGATGATGATAAAAATAAAGAATACAATCATAATCATAGGAAAAAATCTAAAAAAGTATCTAGACGAAAGAAAGAATATACAAAGAGTAATGACGATAGTGGTAATGAAGATAATGATAATGGAGAGAATGAATATCGTAGGAAATATAAGCCAGTTAGTAGGCGGAAAAAAAAGAATCCAAAGAGAACTACTCATAAGCGTAAAAACCACGAATCAGATGCCGACGACGATGTCTCACAGAGGAGACATTCTAAAAAGCATTCTAATAAATATAAATATGATAGTGAC                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL AI976585             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            nCGATAGTGGTAATGAAGATAATGATAATGGAGAGAATGAATATCGTAGGAAATATAAGCCAGTTAGTAGGCGGAAAANAAAGAATCCAAAGAGAACTACTCATAAGCGTAAAAACCTCGAATCAGATGCCGACGACGATGTCTCACAGAGGAGACATTCTAAAAAGCATTCTAATAAATATAAATATGATAGTGACAGTGAAAAAGATGATGGTAATGATGATACTAGTCAGTAAACAGGTGACGGCATACAGTAATTAATCAGATATCATAATGACAAATTTAATATTTAAAAAATGATTTTTTTATCAAAACGATAAACAATTATTTCCTTTTTTTCTTGATAAAATGAAGTGGGAAGAGCAGTGTAATAAAAACCTTTTACTCAAGGATATAAAACTATAATATTTAGTTTAATGTACTCTAAGCAAACTAATAAAACCATTATACACCAATAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGT]
[-] EMBL CD064404             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGATAATGGAGAGAATGAATATCGTAGGAAATATAAGCCAGTTAGTAGGCGG AAAAAAAGAATCCAAAGAGAACTACTCATAAGCGTAAAAACCACGAATCAGATGCCGACGACGATGTCTCACAGAGGAGACATTCT                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD069343             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGTCTCACAGAGGAGACATTCTAAAAAGCATTCTAATAAATATAAATATGATAGTGACAGTGAAAAAGATGATGGTAATGATGATACTAGTCAGTAAACAGGTGACGGCATACAGTAATTAATCAGATATCATAATGACAAATTTAATATTTAAAAAATGATTTTTTTATCAAAACGATAAACAATTATTTCCTTTTTTTCTTGATAAGATGAAGTGGGAAGAGCAGTGTAATAAAAACCTTTTACTCAAGGATATAAAACTATAATATTTAGTTTAATGTACTCTAAGCAAACTAATAAAACCATTAT                                                                 ]




>consensus_10637#0
CCCTCGNAGGCCAAAAATTCGGCACGAGGCAAATTATAATGATAATAATAATGATAATAA
TAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGTGATGAAAATGGTGATGA
TCATGGTGATTACGGTTATGATAGAAGAAAATCTACAAAAAGCCCGTTGAAAAAAAAATC
AAGTCAAAAAAACGAGAAGAATTACTATTCTACTGAATCAGATGATAATAGTAATAATGA
TGATTACTATAAACCAAATCATGAGAAATATAATTCACATAATAACAATAATAATAACGA
TAATGATGATGATGAAGGGAATTCGAATGACAACTACGGATATAGAAGAAAAACGAAAGG
AAAAACACGAAAAACTAAACATAATAAAGAATCAGATGAAACAGATGAGAATGATGCTAA
TAATGATGATTCGCACAAAAAATATGCAACAAGTTATACACGAGACAAATATCCATCAAA
GAAAAAATACTCTTATAGTAAATATTACAGATCCAAAAACAATGCTGAGGGTGATGATGA
CGATGATGATAAAAATAAAGAATACAATCATAATCATAGGAAAAAATCTAAAAAAGTATC
TAGACGAAAGAAAGAATATACAAAGAGTAATGACGATAGTGGTAATGAAGATAATGATAA
TGGAGAGAATGAATATCGTAGGAAATATAAGCCAGTTAGTAGGCGGAAAAAAAAGAATCC
AAAGAGAACTACTCATAAGCGTAAAAACCACGAATCAGATGCCGACGACGATGTCTCACA
GAGGAGACATTCTAAAAAGCATTCTAATAAATATAAATATGATAGTGACAGTGAAAAAGA
TGATGGTAATGATGATACTAGTCAGTAAACAGGTGACGGCATACAGTAATTAATCAGATA
TCATAATGACAAATTTAATATTTAAAAAATGATTTTTTTATCAAAACGATAAACAATTAT
TTCCTTTTTTTCTTGATAAAATGAAGTGGGAAGAGCAGTGTAATAAAAACCTTTTACTCA
AGGATATAAAACTATAATATTTAGTTTAATGTACTCTAAGCAAACTAATAAAACCATTAT
ACACCAATAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTAC
TGCGT

consensusID : consensus_10637#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 745
fasta sequence

                              [TTTTTGGATCTGTAATATTTACTATAAGAGTATTTTTTCTTTCATGGATATTTTTTAATCCTTTTATTCTATTCATCAATAGTCTACTGTAAAAAAAGTTCTAACTCTTATGAGTATGATGATGAAGAGGAAGATAATAAACGATTCAATTATTTAGATTATTCATTACAAGAAGACATGGTAAAAGATGATTATTATGGTTCATATAATAATGAAGGACAACAACAAGATAATAATGAACAAGGATCTGATGATACAAATACAAATTACAATACAAAAAATGAGAATGAAGGAGATGAGACAGAAAATAATGCAGATAATTATAATTCTAAAGAGTCTGATCAATATTATGACACTAATAATTATGCTTCAACTAAACCTTATCAAAATGAATATGGTTCAAATTATAATGATAATAATAATGATAATAATAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGTGATGA-AAATGGTGATGATCATGGTGATTACGGTTATGATAGAAGAAAATCTACAAAAAGCCCGTTG--AAAAAAAAATCATGTC--AAAAAAACGAGAAGAATTACTATTCTACTGAATCAGATGATAATAGTAATAATGATGATTACTATAAACCAAATCATGAGAAATATAATTCACATAATAACAATAATAATAACGATAATGATGATGATGAAGGGAATTCGAATGACAACTACCGGTTTAAAAAGAAAAACGAAAGGAACAAAACCAAAA]

[-] EMBL CD128866             [TTTTTGGATCTGTAATATTTACTATAAGAGTATTTTTTCTTTCATGGATATTTTTTAATCCTTTTATTCTATTCATCAATAGTCTACTGTAAAAAAAGTTCTAACTCTTATGAGTATGATGATGAAGAGGAAGATAATAAACGATTCAATTATTTAGATTATTCATTGCAAGAAGACATGGTAAAAGATGATTATTATGGTTCATATAATAATGAAGGACAACAACAAGATAATAATGAACAAGGATCTGATGATACAAATACAAATTACAATACAAAAAATGAGAATGAAGGAGATGAGACAGAAAATAATGCAGATAATTATAATTCTAAAGAGTCTGATCAATATTATGACACTAATAATTATGCTTCAACTAAACCTTATCAAAATGAATATGGTTCAAATTATAATGATAATAATAATGATAATAATAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGTGATGATAAATGGTGA GCTCAaagtantt                                                                                                                                                                                                                                                       ]
[+] EMBL BF936957             [                                                                 ATTCTATTCATCAATAGTCTACTGTAAAAAAAGTTCTAACTCTTATGAGTATGATGATGAAGAGGAAGATAATAAACGATTCAATTATTTAGATTATTCATTACAAGAAGACATGGTAAAAGATGATTATTATGGTTCATATAATAATGAAGGACAACAACAAGATAATAATGAACAAGGATCTGATGATACAAATACAAATTACAATACAAAAAATGAGAATGAAGGAGATGAGACAGAAAATAATGCAGATAATTATAATTCTAAAGAGTCTGATCAATATTATGACACTAATAATTATGCTTCAACTAAACCTTATCAAAATGAATATGGTTCAAATTATAATGATAATAATAATGATAATAATAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGTGATGA AAATGGTGATGATCATGGTGATTACGGTTATGATAGAAGAAAATCTACAAAAAGCCCGTTG  AAAAAAAAATCAAGTC  AAAAAAACGAGAAGAATTACTATTCTACTGAATCAGATGATAATAGTAATAATGATGATTACTATAAACCAAATCATGAGAAATATAATTCACATAATAACAATAATAATAACGATAATGATGATGATGAAGGGAATTCGAATGACCACTACC                                    ]
[-] EMBL BF936038             [                                                                                                           TTATGAGTATGATGATGAAGAGGAAGATAATAAACGATTCAATTATTTAGATTATTCATTACAAGAAGACATGGTAAAAGATGATTATTATGGTTCATATAATAATGAAGGACAACAACAAGATAATAATGAACAAGGATCTGATGATACAAATACAAATTACAATACAAAAAATGAGAATGAAGGAGATGAGACAGAAAATAATGCAGATAATTATAATTCTAAAGAGTCTGATCAATATTATGACACTAATAATTATGCTTCAACTAAACCTTATCAAAATGAATATGGTTCAAATTATAATGATAATAATAATGATAATAATAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGTGATGA AAATGGTGATGATCATGGTGATTACGGTTATGATAGAAGAAAATCTACAAAAAGCCCGTTG  AAAAAAAAATCAAGTC  AAAAAAACGAGAAGAATTACTATTCTACTGAATCAGATGATAATAGTAATAATGATGATTACTATAAACCAAATCATGAGAAATATAATTCACATAATAACAATAATAATAACGATAATGATGATGATGAAGGGAATTCGAATGACAACTACgg                                   ]
[+] EMBL CD129650             [                                                                                                                                                                                                                ATAATGAAGGACAACAACAAGATAATAATGAACAAGGATCTGATGATACAAATACAAATTACAATACAAAAAATGAGAATGAAGGAGATGAGACAGAAAATAATGCAGATAATTATAATTCTAAAGAGTCTGATCAATATTATGACACTAATAATTATGCTTCAACTAAACCTTATCAAAATGAATATGGTTCAAATTATAATGATAATAATAATGATAATAATAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGTGATGA AAATGGTGATGATCATGGTGATTACGGTTATGATAGAAGAAAATCTACAAAAAGCCCGTTG  AAAAAAAAATCATGTC  AAAAAAACGAGAAGAATTACTATTCTACTGAATCAGATGATAATAGTAATAATGATGATTACTATAAACCAAATCATGAGAAATATAATTCACATAATAACAATAATAATAACGATAATGATGATGATGAAGGGGATTCGAATGACAACTACCGGTTTAAAAAGAAAAACGAAAGGAACAAAACCAAAA]
[+] EMBL CD129656             [                                                                                                                                                                                                                                                                                               gGAAGGAGATGAGACAGAAAATAATGCAGATAATTATAATTCTAAAGAGTCTGATCAATATTATGACACTAATAATTATGCTTCACCTAAACCTTATCAAAATGAATATGGTTCAAATTATAATGATAATAATAATGATAATAATAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGTGATGA AAATGGTGATGATCATGGTGATTACGGTTATGATAGAAGAAAATCTACAAAAAGCCCGTTGAAAAAAAAAAATTATGTCAAAAAAAAACGAGAAGAATTACTATTCTACTGAATCAAATGATAATAGTAATAATGATGATTACTATAAACCAAATCATGAGAAATATAATTCACATAATAACAATAATAATAACGATAATGATGATGATGAAGGGAATTCGAATGACAACTACGGATATAGAAA AAAAACGAAAGGA  AAAACCACAA]
[+] EMBL CD129643             [                                                                                                                                                                                                                                                                                                                                                                                                                                     ATGATAATAATAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGTGATGA AAATGGTGATGATCATGGTGATTACGGCTATGATAGAAGAAAATCTACAAACAGCCCGTTG  AAAAAAAAATCATGTC  AAAAAAACGAAAAGAATTACTATTCTACTGAATCAGATGATAATAGTAATAATGAT                                                                                                                                     ]




>consensus_10637#1
TTTTTGGATCTGTAATATTTACTATAAGAGTATTTTTTCTTTCATGGATATTTTTTAATC
CTTTTATTCTATTCATCAATAGTCTACTGTAAAAAAAGTTCTAACTCTTATGAGTATGAT
GATGAAGAGGAAGATAATAAACGATTCAATTATTTAGATTATTCATTACAAGAAGACATG
GTAAAAGATGATTATTATGGTTCATATAATAATGAAGGACAACAACAAGATAATAATGAA
CAAGGATCTGATGATACAAATACAAATTACAATACAAAAAATGAGAATGAAGGAGATGAG
ACAGAAAATAATGCAGATAATTATAATTCTAAAGAGTCTGATCAATATTATGACACTAAT
AATTATGCTTCAACTAAACCTTATCAAAATGAATATGGTTCAAATTATAATGATAATAAT
AATGATAATAATAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGTGATGAA
AATGGTGATGATCATGGTGATTACGGTTATGATAGAAGAAAATCTACAAAAAGCCCGTTG
AAAAAAAAATCATGTCAAAAAAACGAGAAGAATTACTATTCTACTGAATCAGATGATAAT
AGTAATAATGATGATTACTATAAACCAAATCATGAGAAATATAATTCACATAATAACAAT
AATAATAACGATAATGATGATGATGAAGGGAATTCGAATGACAACTACCGGTTTAAAAAG
AAAAACGAAAGGAACAAAACCAAAA

consensusID : consensus_10637#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 672
fasta sequence

                              [TGACTACATACACATATATATATAATCCTTAAGTGCATTTGTTTCCTACAAAAAATGTTATATTCTCAATTTATTCATTAGTTACAATAAAATGAATTGGATTCATGGATATTTTTTAATCCTTTTATTCTATTCATCAATAGTCTACTGTAAAAAAAGTTCTAACTCTTATGAGTATGATGATGAAGAGGAAGATAATAAACGATTCAATTATTTAGATTATTCATTGCAAGAAGACATGGTAAAAGATGATTATTATGGTTCATATAATAATGAAGGACAACAACAAGATAATAATGAACAAGGATCTGATGATACAAATACAAATTACAATACAAAAAATGAGAATGAAGGAGATGAGACAGAAAATAATGCAGATAATTATAATTCTAAAGAGTCTGATCAATATTATGACACTAATAATTATGCTTCAACTAAACCTTATCAAAATGAATATGGTTCAAATTATAATGATAATAATAATGATAATAATAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGTGATGAAAATGGTGATGATCATGGTGATTACGGTTATGATAGAAGAAAATCTACAAAAAGCCCGTTGAAAAAAAAATCAAGTCAAAAAAACGAGAAGAATTACTATTCTACTGAATCAGATGATAATAGTAATAATGA]

[+] EMBL CD066094             [TGACTACATACACATATATATATAATCCTTAAGTGCATTTGTTTCCTACAAAAAATGTTATATTCTCAATTTATTCATTAGTTACAATAAAATGAATTGGATTCATGGATATTTTTTAATCCTTTTATTCTATTCATCAATAGTCTACTGTAAAAAAAGTTCTAACTCTTATGAGTATGATGATGAAGAGGAAGATAATAAACGATTCAATTATTTAGATTATTCATTGCAAGAAGACATGGTAAAAGATGATTATTATGGTTCATATAATAATGAAGGACAACAACAAGATAATAATGAACAAGGATCTGATGATACAAATACAAATTACAATACAAAAAATGAGAATGAAGGAGATGAGACAGAAAATAATGCAGATAATTATAATTCTAAAGAGTCTGATCAATATTATGACACTAATAATTATGCTTCAACTAAACCTTATCAAAATGAATATGGTTCAAATTATAATGATAATAATAATGATAATAATAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGTGATGAAAA                                                                                                                                 ]
[+] EMBL BF936439             [                                                                                  TACAATAAAATGAATTGGATTCATGGATATTTTTTAATCCTTTTATTCTATTCATCAATAGTCTACTGTAAAAAAAGTTCTAACTCTTATGAGTATGATGATGAAGAGGAAGATAATAAACGATTCAATTATTTAGATTATTCATTGCAAGAAGACATGGTAAAAGATGATTATTATGGTTCATATAATAATGAAGGACAACAACAAGATAATAATGAACAAGGATCTGATGATACAAATACAAATTACAATACAAAAAATGAGAATGAAGGAGATGAGACAGAAAATAATGCAGATAATTATAATTCTAAAGAGTCTGATCAATATTATGACACTAATAATTATGCTTCAACTAAACCTTATCAAAATGAATATGGTTCAAATTATAATGATAATAATAATGATAATAATAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGTGATGAAAATGGTGATGATCATGGTGATTACGGTTATGATAGAAGAAAATCTACAAAAAGCCCGTTGAAAAAAAAATCAAGTCAAAAAAACGAGAAGAATTACTATTCTACTGAATCAGATGATAATAGTAATAATGA]




>consensus_10637#2
TGACTACATACACATATATATATAATCCTTAAGTGCATTTGTTTCCTACAAAAAATGTTA
TATTCTCAATTTATTCATTAGTTACAATAAAATGAATTGGATTCATGGATATTTTTTAAT
CCTTTTATTCTATTCATCAATAGTCTACTGTAAAAAAAGTTCTAACTCTTATGAGTATGA
TGATGAAGAGGAAGATAATAAACGATTCAATTATTTAGATTATTCATTGCAAGAAGACAT
GGTAAAAGATGATTATTATGGTTCATATAATAATGAAGGACAACAACAAGATAATAATGA
ACAAGGATCTGATGATACAAATACAAATTACAATACAAAAAATGAGAATGAAGGAGATGA
GACAGAAAATAATGCAGATAATTATAATTCTAAAGAGTCTGATCAATATTATGACACTAA
TAATTATGCTTCAACTAAACCTTATCAAAATGAATATGGTTCAAATTATAATGATAATAA
TAATGATAATAATAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGTGATGA
AAATGGTGATGATCATGGTGATTACGGTTATGATAGAAGAAAATCTACAAAAAGCCCGTT
GAAAAAAAAATCAAGTCAAAAAAACGAGAAGAATTACTATTCTACTGAATCAGATGATAA
TAGTAATAATGA

consensusID : consensus_10637#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 478
fasta sequence

                              [CTCGGTACCCCACCAATAATAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGTGATGAAAATGGTGATGATCATGGTGATTACGGTTATGATAGAAGAAAATCTACAAAAAGCCCGTTGAAAAAAAAATCAAGTCAAAAAAACGAGAAGAATTACTATTCTACTGAATCAGATGATAATAGTAATAATGATGATTACTATAAACCAAATCATGAGAAATATAATTCACATAATAACAATAATAATAACGATAATGATGATGATGAAGGGAATTCGAATGACAACTACGGATATAGAAGAAAAACGAAAGGAAAAACACGAAAAACTAAACATAATAAAGAATCAGATGAAACAGAT-GAGAATGATGCTAATAATGATGATTCGCACAAAAAATATGCAACAAGTTATACACGAGACAAATATCCATCAAAGAAAAAATACTCTTATAGTAAATATTACAGATCCAAAAA]

[+] EMBL CD066078             [CTCGGTACCCCACCAATAATAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGTGATGAAAATGGTGATGATCATGGTGATTACGGTTATGATAGAAGAAAATCTACAAAAAGCCCGTTGAAAAAAAAATCAAGTCAAAAAAACGAGAAGAATTACTATTCTACTGAATCAGATGATAATAGTAATAATGATGATTACTATAAACCAAATCATGAGAAATATAATTCACATAATAACAATAATAATAACGATAATGATGATGATGAAGGGAATTCGAATGACAACTACGGATATAGAAGAAAAACGAAAGGAAAAACACGAAAAACTAAACATAATAAAGAATCAGATGAAACAGAT GAGAATGATGCTAATAATGATGATTCGCACAAAAAATATGCAACAAGTTATACACGAGACAAATATCCATCAAAGAAAAAATACTCTTATAGTAAATATTACAGATCCAAAAA]
[+] EMBL AW171922             [                                                                                                                                                                                                                                                               attattgttATTATG TGAAGGGAATTCGAATNACAA TACGGATATAGAAGAAAAACGAAAGGAAAANCACGAAAAACTAAACATAATAAAGAATCAGATGAAACAGATCGAGAATGATGCTAATAATGATNATNCTCA                                                                                    ]




>consensus_10637#3
CTCGGTACCCCACCAATAATAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATG
GTGATGAAAATGGTGATGATCATGGTGATTACGGTTATGATAGAAGAAAATCTACAAAAA
GCCCGTTGAAAAAAAAATCAAGTCAAAAAAACGAGAAGAATTACTATTCTACTGAATCAG
ATGATAATAGTAATAATGATGATTACTATAAACCAAATCATGAGAAATATAATTCACATA
ATAACAATAATAATAACGATAATGATGATGATGAAGGGAATTCGAATGACAACTACGGAT
ATAGAAGAAAAACGAAAGGAAAAACACGAAAAACTAAACATAATAAAGAATCAGATGAAA
CAGATGAGAATGATGCTAATAATGATGATTCGCACAAAAAATATGCAACAAGTTATACAC
GAGACAAATATCCATCAAAGAAAAAATACTCTTATAGTAAATATTACAGATCCAAAAA

consensusID : consensus_10637#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 329
fasta sequence

                              [GTAATGATGAAACTAGTCAGTAAACAGGTGACGGCATTCAGTATTTAATCAGATATCATAATGACAAATTTAATATTTAAAAAATGATTTTTTTATCGAAACGATAAACAATGATTTCCTTTTTTTCTTGATAAGATGAAGTGGGAAGAGCAGTGTAATAAAAACGTTTGACTCAAGGATATAAAAGAATAATATTTAGTTTAATGTAGTCTAAGCAAACTAATAAAGCCTGTTATACAACAATATGCATCAACTGTTGTACACTTTTTTAATGTTACCCAGTAGTAACAACTCACATGTTTTATTTCAGGAAGAGTTAATAGAAATTA]

[-] EMBL AI975030             [GTAATGATGAAACTAGTCAGTAAACAGGTGACGGCATTCAGTATTTAATCAGATATCATAATGACAAATTTAATATTTAAAAAATGATTTTTTTATCGAAACGATAAACAATGATTTCCTTTTTTTCTTGATAAGATGAAGTGGGAAGAGCAGTGTAATAAAAACGTTTGACTCAAGGATATAAAAGAATAATATTTAGTTTAATGTAGTCTAAGCAAACTAATAAAGCCTGTTATACAACAATATGCATCAACTGTTGTACACTTTTTTAATGTTACCCAGTAGTAACAACTCACATGTTTTATTTCAGGAAGAGTTAATAGAAATTA]




>consensus_10637#4
GTAATGATGAAACTAGTCAGTAAACAGGTGACGGCATTCAGTATTTAATCAGATATCATA
ATGACAAATTTAATATTTAAAAAATGATTTTTTTATCGAAACGATAAACAATGATTTCCT
TTTTTTCTTGATAAGATGAAGTGGGAAGAGCAGTGTAATAAAAACGTTTGACTCAAGGAT
ATAAAAGAATAATATTTAGTTTAATGTAGTCTAAGCAAACTAATAAAGCCTGTTATACAA
CAATATGCATCAACTGTTGTACACTTTTTTAATGTTACCCAGTAGTAACAACTCACATGT
TTTATTTCAGGAAGAGTTAATAGAAATTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10637#0      CCCTCGNAGGCCAAAAATTCGGCACGAGGCAAATTATAATGATAATAATAATGATAATAA 60
consensus_10637#4      ------------------------------------------------------------
consensus_10637#3      ------------------------------------------------------------
consensus_10637#1      ------------------------------------------------------------
consensus_10637#2      ------------------------------------------------------------
                                                                                   

consensus_10637#0      TAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGTGATGAAAATGGTGATGA 120
consensus_10637#4      ------------------------------------------------------------
consensus_10637#3      ------------------------------------------------------------
consensus_10637#1      ------------------------------------------------------------
consensus_10637#2      ------------------------------------------------------------
                                                                                   

consensus_10637#0      TCATGGTGATTACGGTTATGATAGAAGAAAATCTACAAAAAGCCCGTTGAAAAAAAAATC 180
consensus_10637#4      ------------------------------------------------------------
consensus_10637#3      ------------------------------------------------------------
consensus_10637#1      ------------------------------------------------------------
consensus_10637#2      ------------------------------------------------------------
                                                                                   

consensus_10637#0      AAGTCAAAAAAACGAGAAGAATTACTATTCTACTGAATCAGATGATAATAGTAATAATGA 240
consensus_10637#4      ------------------------------------------------------------
consensus_10637#3      ------------------------------------------------------------
consensus_10637#1      ------------------------------------------------------------
consensus_10637#2      ------------------------------------------------------------
                                                                                   

consensus_10637#0      TGATTACTATAAACCAAATCATGAGAAATATAATTCACATAATAACAATAATAATAACGA 300
consensus_10637#4      ------------------------------------------------------------
consensus_10637#3      ------------------------------------------------------------
consensus_10637#1      ------------------------------------------------------------
consensus_10637#2      ------------------------------------------------------------
                                                                                   

consensus_10637#0      TAATGATGATGATGAAGGGAATTCGAATGACAACTACGGATATAGAAGAAAAACGAAAGG 360
consensus_10637#4      ------------------------------------------------------------
consensus_10637#3      ------------------------------------------------------------
consensus_10637#1      ------------------------------------------------------------
consensus_10637#2      ------------------------------------------------------------
                                                                                   

consensus_10637#0      AAAAACACGAAAAACTAAACATAATAAAGAATCAGATGAAACAGATGAGAATGATGCTAA 420
consensus_10637#4      ------------------------------------------------------------
consensus_10637#3      ------------------------------------------------------------
consensus_10637#1      ------------------------------------------------------------
consensus_10637#2      ------------------------------------------------------------
                                                                                   

consensus_10637#0      TAATGATGATTCGCACAAAAAATATGCAACAAGTTATACACGAGACAAATATCCATCAAA 480
consensus_10637#4      ------------------------------------------------------------
consensus_10637#3      ------------------------------------------------------------
consensus_10637#1      ------------------------------------------------------------
consensus_10637#2      ------------------------------------------------------------
                                                                                   

consensus_10637#0      GAAAAAATACTCTTATAGTAAATATTACAGATCCAAAAACAATGCTGAGGGTGATGATGA 540
consensus_10637#4      ------------------------------------------------------------
consensus_10637#3      ------------------------------------------------------------
consensus_10637#1      ------------------------------------------------------------
consensus_10637#2      ------------------------------------------------------------
                                                                                   

consensus_10637#0      CGATGATGATAAAAATAAAGAATACAATCATAATCATAGGAAAAAATCTAAAAAAGTATC 600
consensus_10637#4      ------------------------------------------------------------
consensus_10637#3      ------------------------------------------------------------
consensus_10637#1      ------------------------------------------------------------
consensus_10637#2      ------------------------------------------------------------
                                                                                   

consensus_10637#0      TAGACGAAAGAAAGAATATACAAAGAGTAATGACGATAGTGGTAATGAAGATAATGATAA 660
consensus_10637#4      ------------------------------------------------------------
consensus_10637#3      ------------------------------------------------------------
consensus_10637#1      ------------------------------------------------------------
consensus_10637#2      ------------------------------------------------------------
                                                                                   

consensus_10637#0      TGGAGAGAATGAATATCGTAGGAAATATAAGCCAGTTAGTAGGCGGAAAAAAAAGAATCC 720
consensus_10637#4      ------------------------------------------------------------
consensus_10637#3      ------------------------------------------------------------
consensus_10637#1      ------------------------------------------------------------
consensus_10637#2      ------------------------------------------------------------
                                                                                   

consensus_10637#0      AAAGAGAACTACTCATAAGCGTAAAAACCACGAATCAGATGCCGACGACGATGTCTCACA 780
consensus_10637#4      ------------------------------------------------------------
consensus_10637#3      ------------------------------------------------------------
consensus_10637#1      ------------------------------------------------------------
consensus_10637#2      ---TGACTACATACACATATATATATAATCCTTAAGTGCATTTGTTTCCTACAAAAAATG 57
                                                                                   

consensus_10637#0      GAGGAGACATTCTAAAAAGCATTCTAATAAATATAAATATGATAGTGACAGTGAAAAAGA 840
consensus_10637#4      ------------------------------------------------------------
consensus_10637#3      --------------------CTCGGTACCCCACCAATAATAACGGTGATGATAATGGTGA 40
consensus_10637#1      ----TTTTTGGATCTGT--AATATTTACTATAAGAGTATTTTTTCTTTCATGGATATTTT 54
consensus_10637#2      TTATATTCTCAATTTATTCATTAGTTACAATAAAATGAATTGGA--TTCATGGATATTTT 115
                                                                                   

consensus_10637#0      TGATGGTAATGATGATACTAGTCAGTAAACAG--GTGACGGCATACAGTAATTAATCAGA 898
consensus_10637#4      -----GTAATGATGAAACTAGTCAGTAAACAG--GTGACGGCATTCAGTATTTAATCAGA 53
consensus_10637#3      TGATAATGGTGATGAAAATGGTGATGAAAATG--GTGATGAT-CATGGTGATTA--CGGT 95
consensus_10637#1      TTAATCCTTTTATTCTATTCATCAATAGTCTACTGTAAAAAAAGTTCTAACTCTTATGAG 114
consensus_10637#2      TTAATCCTTTTATTCTATTCATCAATAGTCTACTGTAAAAAAAGTTCTAACTCTTATGAG 175
                                * **   * *  * *  *       ** *             *        

consensus_10637#0      TATCATAATGACAAATTTAATA--------TTTAAAAAAT-GATTTTTTTATCAAAACGA 949
consensus_10637#4      TATCATAATGACAAATTTAATA--------TTTAAAAAAT-GATTTTTTTATCGAAACGA 104
consensus_10637#3      TATGATAGAAGAAAATCTACAAAAAGCCCGTTGAAAAAAA-AATCAAGTCAAAAAAACGA 154
consensus_10637#1      TATGATGATGAAGAGGAAGATAATAAACGATTCAATTATTTAGATTATTCATTACAAGAA 174
consensus_10637#2      TATGATGATGAAGAGGAAGATAATAAACGATTCAATTATTTAGATTATTCATTGCAAGAA 235
                       *** **       *       *        ** **  *          * *    **  *

consensus_10637#0      TAAACAATTATTTCCTTTT---TTTCTTGATAAAATGAAGTGGGA--AGAGCAGTGTAAT 1004
consensus_10637#4      TAAACAATGATTTCCTTTT---TTTCTTGATAAGATGAAGTGGGA--AGAGCAGTGTAAT 159
consensus_10637#3      GAAGAATTACTATTCTACTGAATCAGATGATAATAGTAATAATGA--TGATTACTATAAA 212
consensus_10637#1      GACATGGTAAAAGATGATTATTATGGTTCATATAATAATGAAGGACAACAACAAGATAAT 234
consensus_10637#2      GACATGGTAAAAGATGATTATTATGGTTCATATAATAATGAAGGACAACAACAAGATAAT 295
                        *     *          *        * ***  *  *     **    *  *   *** 

consensus_10637#0      AAAAAC--------CTTTTACTCAAGGATATAAAACTATA---ATATTTAGTTTAATGTA 1053
consensus_10637#4      AAAAAC--------GTTTGACTCAAGGATATAAAAGAATA---ATATTTAGTTTAATGTA 208
consensus_10637#3      CCAAATCATGAGAAATATAATTCACATAATAACAATAATA---ATAACGATAATGATGAT 269
consensus_10637#1      AATGAACAAGGATCTGATGATACAAATACAAATTACAATACAAAAAATGAGAATGAAGGA 294
consensus_10637#2      AATGAACAAGGATCTGATGATACAAATACAAATTACAATACAAAAAATGAGAATGAAGGA 355
                           *            * *  **   *   *  *  ***   * *   *   * * *  

consensus_10637#0      CTCTAAGCA--AACTAATAAAACC-ATTATA----CACCAATAAAAAAAAAAAAAAAAAA 1106
consensus_10637#4      GTCTAAGCA--AACTAATAAAGCCTGTTATA----CAACAATATGCATCAACTGTTGTAC 262
consensus_10637#3      GATGAAGGG--AATTCG-AATGACAACTACG-----GATATAGAAGAAAAACGAAAGGAA 321
consensus_10637#1      GATGAGACAGAAAATAATGCAGATAATTATAATTCTAAAGAGTCTGATCAATATTATGAC 354
consensus_10637#2      GATGAGACAGAAAATAATGCAGATAATTATAATTCTAAAGAGTCTGATCAATATTATGAC 415
                           *      ** *            **                 *  **       * 

consensus_10637#0      AAAAAAA-ACATGCC--ATGCAG---CTGCATTACCGTAC-TGCGT-------------- 1145
consensus_10637#4      ACTTTTT-TAATGTT--ACCCAG---TAGTAACAACTCACATGTTTTATTTCAGGAAGA- 315
consensus_10637#3      AAACACG-AAAAACT--AAACA----TAATAAAGAATCAGATGAAACAGATGAGAATGAT 374
consensus_10637#1      ACTAATAATTATGCTTCAACTAAACCTTATCAAAATGAATATGGTTCAAATTATAATGAT 414
consensus_10637#2      ACTAATAATTATGCTTCAACTAAACCTTATCAAAATGAATATGGTTCAAATTATAATGAT 475
                       *         *      *   *                *  **                 

consensus_10637#0      ------------------------------------------------------------
consensus_10637#4      GTTAATAGAAATTA---------------------------------------------- 329
consensus_10637#3      GCTAATAATGATGATTCGCACAAAAAATATGCAACAAGTTATACACGAGACAAATATCCA 434
consensus_10637#1      AATAATAATGATAATAATAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGT 474
consensus_10637#2      AATAATAATGATAATAATAACGGTGATGATAATGGTGATGATAATGGTGATGAAAATGGT 535
                                                                                   

consensus_10637#0      ------------------------------------------------------------
consensus_10637#4      ------------------------------------------------------------
consensus_10637#3      TCAAAGAAAAAATACTCTTATAGTAAATATTACAGATCCAAAAA---------------- 478
consensus_10637#1      GATGAAAATGGTGATGATCATGGTGATTACGGTTATGATAGAAGAAAATCTACAAAAAGC 534
consensus_10637#2      GATGAAAATGGTGATGATCATGGTGATTACGGTTATGATAGAAGAAAATCTACAAAAAGC 595
                                                                                   

consensus_10637#0      ------------------------------------------------------------
consensus_10637#4      ------------------------------------------------------------
consensus_10637#3      ------------------------------------------------------------
consensus_10637#1      CCGTTGAAAAAAAAATCATGTCAAAAAAACGAGAAGAATTACTATTCTACTGAATCAGAT 594
consensus_10637#2      CCGTTGAAAAAAAAATCAAGTCAAAAAAACGAGAAGAATTACTATTCTACTGAATCAGAT 655
                                                                                   

consensus_10637#0      ------------------------------------------------------------
consensus_10637#4      ------------------------------------------------------------
consensus_10637#3      ------------------------------------------------------------
consensus_10637#1      GATAATAGTAATAATGATGATTACTATAAACCAAATCATGAGAAATATAATTCACATAAT 654
consensus_10637#2      GATAATAGTAATAATGA------------------------------------------- 672
                                                                                   

consensus_10637#0      ------------------------------------------------------------
consensus_10637#4      ------------------------------------------------------------
consensus_10637#3      ------------------------------------------------------------
consensus_10637#1      AACAATAATAATAACGATAATGATGATGATGAAGGGAATTCGAATGACAACTACCGGTTT 714
consensus_10637#2      ------------------------------------------------------------
                                                                                   

consensus_10637#0      -------------------------------
consensus_10637#4      -------------------------------
consensus_10637#3      -------------------------------
consensus_10637#1      AAAAAGAAAAACGAAAGGAACAAAACCAAAA 745
consensus_10637#2      -------------------------------