These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10638#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1106 fasta sequence [CGACCCATGGTATTTCGTTAACAAATGTTATGGAATCGTTGCATTGATTCATCATCCACTCGAAGGAAACATTGTGCTGTACGCTCTTTGGTTACCTCGTTTTGTAGATGCCATACGCCACTTGGAAGATTGGCATCTGCAGCTTGACCAGGTGAACGACAAGATGGTAGAATACGACATTCAAACCCACACATTGCGAACAGTAAATTAGGGTTATCTTTGCTATAAACAGAGACGAAACTGCTATCCCAATCAATTGTTGTGACGGATCTCGGCAAACGGTTTTTGATATCCCAAAAAACAGCACGACCAAGATTGACATCATGTTTCATTAAGCGCATTCTACTATCGCGTGGCCAACACTTTTTATTGTTGTAACCCACAATGTTTTCGTTATTTGGATCAGGGTGCTCTGTTAGGTAACGCTGAATGAGATCGCGAGCGTCCTCCGCCGAGAAACGGAAGAACATCCAAAAACGGTCTACATACCGACAATACAGTCGAATAGGATGGGAGATTTCTGTGGCAGTATCCTGGAACTGAAGAAAGTCGTTTGGCATCTGAGGAGGACCCCACATCTCAGCTGCTCTTTCGAGACCCAAAACTAGCAAGTCCAGTACAAGGCCATAATACTGTGTAATAAAGGATGAAAACTGCAGACCGCGGATGATTCCGTAACTGTTAGTATGATTCATATCCTTGTAATTTATAACAACGTTATTTTTAGCAGTCATGTAGTCCGCAATATTGTGATCGACAATTAGTCTCAGGAGACGATTGAGCAATGTAAGGTCAATTTTCTCATAAACTTTTTCAAATTTCGTTTCCAACAAAACGTTACATTCACCCTCACCAGTCTCCCAAACATCTTTTAAGTTGTTAATACCCTGGCACCACTTGTATACAAGTAAAGGTGGAGGCTCCAAGTCAGCTGGTTTGATCCATGGAGGAAACAGGCGACGTTTATCAGCTTCATACCACAAATACTGATCCAAATAAGCATCTGTTATCTTCTCCAAGGGCTCAACATCATAGACAGGCACCAGATGACTGTAAAGATCCATGAATTCAATCCCAACTTCTTTGAAAGCCCTTTGAGTAAGTAA] [+] EMBL CD149625 [CGACCCATGGTATTTCGTTAACAAATGTTACGGAATCGTTGCATTGATTCATCATCCACTCGAAGGAAACATTGTGCTGTACGCTCTTTGGTTACCTCGTTTTGTAGATGCCATACGCCACTTGGAAGATTGGCATCTGCAGCTTGACCAGGTGAACGACAAGATGGTAGAATACGACATTCAAACCCACACATTGCGAACAGTAAATTAGGGTTATCTTTGCTATAAACAGAGACGAAACTGCTATCCCAATCAATTGTTGTGACGGATCTCGGCAAACGGTTTTTGATATCCCAAAAAACAGCACGACCAGGATTGACATCATGTTTCATTAAGCGCATTCTACTATCGCGTGGCCAACACTTTTTATTGTTGTAACCCACAATGTTNTCGTTATTTGGATCAGGGTGCTCTGTTANGTAACGCTGAATGAGATCGCGAGCGTCCTCCGCCGAGAAACGGAAGACCATCCAAAAACGGTCTACATACCGACAATACAGTCAAATAGGATGGGAGATTTCTGTGGCCATATCCTGGAACTGAAAAAAGTC TTTGGCATCTGAGGAGGACCC ] [+] EMBL CD149487 [CGACCCATGGTATTTCGTGAACAAATGTTATGGAATCGTTGCATTGATTCATCATCCACTCGAAGGAAACATTGTGCTGTACGCTCTTTGGTTACCTCGTTTTGTAGATGCCATACGCCACTTGGAAGATTGGCATCTGCAGCTTGACCAGGTGAACGACAAGATGGTAGAATACGACATTCAAACCCACACATTGCGAACAGTAAATTAGGGTTATCTTTGCTATAAACAGAGACGAAACTGCTATCCCAATCAACTGTTGTGACGGATCTCGGCAAACGGTTTTTGATATCCCAAAAAACAGCACGACCAAGATTGACATCATGTTTCATTAAGCGCATTCTACTATCGCGTGGCCAACACTTTTTATTG ] [+] EMBL CD111827 [CGACCCATGGGATTTCGTTAACAAATGTTATGGAATCGTTGCATTGATTCGTCATCCACTCGAAGGAAACATTGTGCTGTACGCTCTTTGGTTACCTCGTTTTGTAGATGCCATACGCCACTTGGAAGATTGGCATCTGCAGCTTGACCAGGTGAACGACAAGATGGTAGAATACGACATTCAAACCCACACATTGCGAACAGTAAATTAGGGTTATCTTTGCTATAAACAGAGACGATACTGCTATCCCAATCAATTGTTGTGACGGATCTCGGCAAACGGTTTTTGATATCCCAAAAAACAGCACGACCAAGATTGACATCATGTTTCATTAAGCGCATTCTACTATCGCGTGGCCAACACTTTTTATT ] [+] EMBL CD149532 [CGACCCATGGTATTTCGTTAACAAATGTTATGGCATCGTTGCATTGATTCATCATCCACTCGAAGGAAACATTGTGCTGTACGCTCTTTGGTTACCTCGTTTTGTAGATGCCATACGCCACTTGGAAGATTGGCATCTGCAGCTTGACCAGGTGAACGACAAGATGGTAGAGTACGACATTCAAACCCACACATTGCGAACAGTAAATTAGGGTTATCTTTGCTATAAACAGAGACGAAACTGCTATTCCAATCAATTGTTGTGACGGATCTCGGCAAACGGTTTTTGATATCCCAAAAAACAGCACGACCAAGATTGACATCATGTTTCATTAA ] [+] EMBL CD111836 [CGACCCATGGTATTTCGTTAACAAATGTTATGGAATCGTTGCATTGATTCATCATCCACTCGAAGGAAACATTGTGCTGTACGCTCTTTGGTTACCTCGTTTTGTAGATGCCATACGCCACTTGGAAGATTGGCATCTGCAGCTTGACCAGGTGAACGACAAGATGGTAGAATACGACATTCAAACCCACACATTGCGAACAGTAAATTAGGGTTATCTTTGCTATAAACAGAGACGAAACTGCTATCCCAATCAATTGTTGTGACGGATCTCGGCAAACGGTTTTTGATATCCCAAAAAACAGCACGACCAAGATTGACATCATGTTTCATTAAGCGCATTCTACTAT ] [-] EMBL CD149318 [ acCCCATGGTATTTCGTTAACAAATGTTATGGAATCGCTGCATTGATTCATCATCCACTTGAAGGAAACATTGTGCTGTACGCTCTTTGGTTACCTCGTTTTGTAGATGCCATACGCCACTTGGAAGATTGGCATCTGCAGCTTGACCAGGTGAACGACAAGATGGTAGAATACGACATTCAAACCCACACATTGCGAACAGTAAATTAGGGTTATCTTTGCTATAAACAGAGACGAAACTGCTATCCCAATCAATTGTTGTGACGGATCTCGGCAAACGGTTTTTGATATCCCAAAAAACAGCACGACCAAGATTGACATCATGTTTCATTAAGCGCATTCTACTATCGCGTGGCCAACACTTTTTATTGTTGTAACCCACAATGTTTTCGTTATTTGGATCAGGGTGCTCTGTTAGGTAACGCTGAATGAGATCGCGAGCGTCCTCCGCCGAGAAACGGAAGAACATCCAAAAACGGTCTACATACCGACAATACAGTCGAATAGGATGGGAGATTTCTGTGGCAGTATCCTGGAACTGAAGAAAGTCGTTTGGCATCTGAGGAG ] [+] EMBL CD193373 [ CATTGTGCTGTACGCTCTTTGGTTACCTCGTTTTGTAGATGCCATACGCCACTTGGAAGATTGGCATCTGCAGCTTGACCAGGTGAACGACAAGATGGTAGAATACGACATTCAAACCCACACATTGCGAACAGTAAATTAGGGTTATCTTTGCTATAAACAGAGACGAAACTGCTATCCCAATCAATTGTTGTGACGGA ] [-] EMBL CD149399 [ CTTGGAAGATTGGCATCTGCAGCTTGACCAGGTGAACGACAAGATGGTAGAATACGACATTCAAACCCACACATTGCGAACAGTAAATTAGGGTTATCTTTGCTATAAACAGAGACGAAACTGCTATCCCAATCAATTGTTGTGACGGATCTCGGCAAACGGTTTTTGATATCCCAAAAAACAGCACGACCAAGATTGACATCATGTTTCATTAAGCGCATTCTACTATCGCGTGGCCAACACTTTTTATTGTTGTAACCCACAATGTTTTCGTTATTTGGATCAGGGTGCTCTGTTAGGTAACGCTGAATGAGATCGCGAGCGTCCTCCGCCGAGAAACGGAAGAACATCCAAAAACGGTCTACATACCGACAATACAGTCGAATAGGATGGGAGATTTCTGTGGCAGTATCCTGGAACTGAAGAAAGTCGTTTGGCATCTGAGGAG ] [-] EMBL CD182714 [ TGCGAACAGTAAATTAGGGTTATCTNTGCTATAAACAGAGACGAAACTGCTATCCCAATCAATTGTTGTGACGGATCTCGGCAAACGGTTTTTGATATCCCAAAAAACAGCACGACCAAGATTGACATCATGTTTCATTAAGCGCATTCTACTATCGCGTGGCCAACACTTTTTATTGTTGTAACCCACAATGTTTTCGTTATTTGGATCAGGGTGCTCTGTTAGGTAACGCTGAATGAGATCGCG ] [-] EMBL CD149223 [ AATCAATTGTTGTGACGGATCTCGGCAAACGGTTTGTGATATCCCAAAAAACAGCACGACCAAGATTGACATCATGTTTCATTAAGCGCATTCGACTATCGCGTGGCCAACACTTTTTATTGTTGTAACCCACAATGTTTTCGTTATTTGGATCAGGGTGCTCTGTTAGGTAACGCTGAATGAGATCGCGAGCGTCCTCCGCCGAGAAACGGAAGAACATCCAAAAACGGTCTACATACCGACAATACAGTCGAATAGGATGGGAGATTTCTGTGGCAGTATCCTGGAACTGAAGAAAGTCGTTTGGCATCTGAGGAG ] [-] EMBL CD149290 [ AATTGTTGTGACGGATCTCGGCAAACGGTTCTTGATATCCCAAAAAACAGCACGACCAAGATTGACATCATGTTTCATTAAGCGCATTCTACTATCGCGTGGCCAACACTTTTTATTGTTGTAACCCACAATGTTTTCGTTATTTGGATCAGGGTGCTCTGTTAGGTAACGCTGAATGAGATCGCGAGCGTCCTCCGCCGAGAAACGGAAGAACATCCAAAAACGGTCTACATACCGACAATACAGTCGAATAGGATGGGAGATTTCTGTGGCAGTATCCTGGAACTGAAGAAAGTCGTTTGGCATCTGAGGAG ] [+] EMBL CD192836 [ TAAGCGCATTCTACTATCGCGTGGCCAACACTTTTTATTGTTGTAACCCACAATGTTTTCGTTATTTGGATCAGGGTGCTCTGTTAGGTAACGCTGAATGAGATCGCGAGCGTCCTCCGCCGAGAAACGGAAGAACATCCAAAAACGGTCTACATACCGACAATACAGTCGAATAGGATGGGAGATTTCTGTGGCAGTATCCTGGAACTGAAGAAAGTCGTTTGGCATCTGAGGAGGACCGCACATCTCAGCTGCTCTTTCGAGACCCAAAACTAGCAAGTCCAGTACAAGGCCA ] [-] EMBL CD149200 [ CCAACACTTTTTATTGTTGTAA CCACAATGTTTTCGTTATTTGGATCAGGGTGCTCTGTTAGGTAACGCTGAATGAGATCGCGAGCGTCCTCCGCCGAGAAACGGAAGAACATCCAAAAACGGTCTACATACCGACAATACAGTCGAATAGGATGGGAGATTTCTGTGGCAGTATCCTGGAACTGAAGAAAGTCGTTTGGCATCTGAGGAGGA ] [-] EMBL CD149274 [ CCAACACTTTTTATTGTTGTAACCCACAATGTTTTCGTTATTTGGATCAGGGTGCTCTGTTAGGTAACGCTGAATGAGATCGCGAGCGTCCTCCGCCGAGAAACGGAAGAACATCCAAAAACGGTCTACATACCGACAATACAGTCGAATAGGATGGGAGATTTCTGTGGCAGTATCCTGGAACTGAAGAAAGTCGTTTGGCATCTGAGGAG ] [-] EMBL CD149264 [ ACTTTTTATTGTTGTAACCCACAATGTTTTCGTTATTTGGATCAGGGTGCTCTGTTAGGTAACGCTGAATGAGATCGCGAGCGTCCTCCGCCGAGAAACGGAAGAACATCCAAAAACGGTCTACATACCGACAATACAGTCGAATAGGATGGGAGATTTCTGTGGCAGTATCCTGGAACTGAAGAAAGTCGTTTGGCATCTGAGGAG ] [-] EMBL CD149255 [ CAATGTTTTCGTTATTTGGATCAGGGTGCTCTGTTAGGTAACGCTGAATGAGATCGCGAGCGTCCTCCGCCGAGAAACGGAAGAACATCCAAAAACGGTCTACATACCGACAATACAGTCGAATAGGATGGGAGATTTCTGTGGCAGTATCCTGGAACTGAAGAAAGTCGTTTGGCATCTGAGGAG ] [+] EMBL CD147232 [ TGCTCTTTCGAGACCCAAAACTAGCAAGTCCAGTACAAGGCCATAATACTGTGTAATAAAGGATGAAAACTGCAGACCGCGGATGATTCCGTAACTGTTAGTATGATTCATATCCTTGTAATTCATAACAACGTTATTTTTAGCAGTCATGTAGTCCGCAATATTGTGATCGACAATTAGTCTCAGGAGACGATTGAGCAATGTAAGGTCAATTTTCTCATAAACTTTTTCAAATTTCGTTTCCAGCAAAACGTTACATTCACCCTCACCAGTCTCCCAAACATCTTTTAAGTTGTTAATACCCTGGCACCACTTGTATACAAGTAAAGGTGGAGGCTCCAAGTCAGCTGGTTTGATCCATGGAGGAAACAGGCGACGTTTATCAGCTTCATACCACAAATACTGATCCAAATAAGCATCTGTTATCTTCTCCAAGGGCTCAACATCATAGACAGGCACCAGATGACT ] [+] EMBL CD186941 [ GGATGAAAACTGCAGACCGCGGATGATTCCGTAACTGTTAGTATGATTCATATCCTTGTAATTTATAACAACGTTATTTTTAGCAGTCATGTAGTCCGCAATATTGTGATCGACAATTAGTCTAAGGAGACGATTGAGCAATGTAAGGTCAATTTTCTCATAAACTTTTTCAAATTTCGTTTCCAACAAAACGTTACATTCACCCTCACCAGTCTCCCAAACATCTTTTAAGTTGTTAATACCCTGGCACCACTTGTATACAAGTAAAGGTGGAGGCTCCAAGTCAGCTGGTTTGATCCATGGAGGAAACAGGCGACGTTTATCAGCTTCATACCACAAATACTGATCCAAATAAGCATCTG ] [-] EMBL CD163108 [ TTCCGTAACTGTTAGTATGATTCATATCCTTGTAATTTATAACAACGTTATTTTTAGCAGTCATGTAGTCCGCAATATTGTGATCGACAATTAGTCTCAGGAGACGATTGAGCAATGTAAGGTCAATTTTCTCATAAACTTTTTCAAATTTCGTTTCCAACAAAACGTTACATTCACCCTCACCAGTCTCCCAAACATCTTTTAAATTGTTAATAGCCTGGCACCACTTGTATACAAGTAAAGGTGGAGGCTCCAAGTCAGCTGGTTTGATCCATGGAGGAAACAGGCGACGTTTATCAGCTTCATACCACAAATACTGATCCAAATAAGCATCTGTTATCTTCTCCAAGGGCTCAACATCATAGACAGGCACCAAATGACTGTAAAGATCCATGAATTCAATCCCAACTTCTTTGAAAGCCCTTTGAGTAAGTAA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||