cluster # 10641

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Schistosoma mansoni
cluster # 10641 cluster # 10641 Sequences # 19 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10641#0 length = 1629 sequences # 14

consensus_10641#1 length = 510 sequences # 4
consensus_10641#2 length = 413 sequences # 1

consensusID : consensus_10641#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1629
fasta sequence

                              [GGTTCACAGAATGACTCGGGGGTCCCCTCATCGATCTCACAAAAAACATCGTCACAAGAATCGTGATAGGTCTCGTTCTCCTCTGGACCAGATTTCTGATAGGACTGCTACTAGTCGAGATGATCAATCACCTAGTGATATTGGAGGC-ACTGGTGTTGATATTTCTCTCTCAATTGCGGAAACAAATGCTTTGAGAGCTAAGCTGGGTCTTGCCCCTCTGGATACTGATGATACTACAAAATCAGAACGAGCATTAGATAACCAAGCCGATTGCTACGTCCATGCACCGGCTAAAGATATCAGAAAAATAAGGGAATCAGAAGCAATCAAGGAAAAGCTAAATGTCCTTAAAG-AAAAAAGATCA-CTA-TTAGATAAAATCGGGCAGGAAAAACTCTCCACTCCCTCTGCATGTGAATCGGATGTTCAATCATGGGTTGAGAAAATGCGTGAGAAAGAACGAATTCAGAAACAAGCCGAAGAAAGAGCTAAGCTGTTATCTGAGATTGACGATCAGTTGGCTGTTTCTGAGTTTGTAGAGTCAAGGTTGATTCAAAATGATAAAAAGTACAAACCCAATGATTTGGCTGGTCTTCGCGTCGAACATAGTTCGTCTCGTTTTGTTGACGGTCAATCAGTTATCCTGACGATTAAAGACTCAGGTGTTTTGGATGAATCTGAAGATGTTTTAGTGAATGTAAATATAATTGATGATGAAAAAGCTGATGTCAATAGAGAAAATATAAGAAAGACCGCCGGTTTGGCTGGAATCGAAGATGAAGTTGATGAGGATGTACTTCTTGGTTTACGTTCTAAAGCTGTCCTTAGCAAGTATGATTCAGAGATTAATGGCATTAAGAAGGACCACTTTGTTATTAATTCTGATGGCTCTTATAATACAGAGGATGAACGTTTATTGAAACAACTACAAGCTGAACTGAAAGAAGGAAGACAATCATTACCTGATACTGAGCTTCGTATAGCTTCTGAGTACTACAGTTCGGAAGAAATGGCTGCGAAATTTAAAAAGCGTAAACGTCGTATCAAAACTATTCGTCAAGCACTGACTGCTGATGAACTTTTGAGTGAATTGCCGGAACAATTAAGCTCTTCTGATTTAGGAAGCCGTTCAACAGTTAGAGAAAGTCGCTTAAATAGTAACATCCCATCTGCAAATGACACATTTTCTGCTGAAGAATTTTCTGCACAAATAATAGATGTCAAAGATAGTTACGAAGAATATTGGTCAGCAGCAGATCATATCGACGAACCAGATGAATTGAGAAGTGAATTAGAGAAAACTATTGGGCGAGTGATGCAATCGAAGTCACGGGTTGCTTCTAAACCGGAAGAAATTACATCACAACTCTTAGC-AAAAAACATAGCTACTCATTCATCCGAATCCGTGTCACAGTCACTTGTGTCTGATACATCGACAAATAATAGCAAGAAAGACAATGTTGTGTTCGACTCTACTGCACAATTTTATAAGTCGATTGGTATTGGTTTTCAGGAAAGTATGAAAAGAAATACTCGTTACAATCAATTCTTACAAAACCAATCTAGATTACAGAATAATGGCGGGGCAGTTGGTACTAATGATGATGATGATATGATTTCACANGGATACAA]

[-] EMBL CD161365             [GGTTCACAGAATGACTCGGGGGTCCCCTCATCGATCTCACAAAAAACATCGTCACAAGAATCGTGATAGGTCTCGTTCTCCTCTGGACCAGATTTCTGATAGGACTGCTACTAGTCGAGATGATCAATCACTTAGTGATATTGGAGGCGACTGGTGTTGATATTTCTCTCTCAATTGCGGAAACAAATGCTTTGAGAGCTAAGGTGGGTCTTGCCCCTCTGGATAATGATGATAGTACAAAATCAGATCGAGCATTAGATAGCCAAGCCGATTGGTACGTCCATGCACCGGCTAAAGATATCAGGAAAATAAGGGAATCAGAAGCAATCAAGGAGAAGCTAAATGTCCTTAAAG AAAAAAGATCAGCTACTTAGATAAAATCGGGCAGGAGAAACTCTCCACTCCCTCTGCATGTGAATAGGATGTTCAATCATGGGTTGAGAAAATGCGT ACAAAGAAata                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD122570             [                                                                                              TCTGATAGGACTGCTACTAGTCGAGATGATCAATCACCTAGTGATATTGGAGGC ACTGGTGTTGATATTTCTCTCTCAATTGCGGAAACAAATGCTTTGAGAGCTAAGCTGGGTCTTGCCCCTCTGGATACTGATGATACTACAAAATCAGAACGAGCATTAGATAACCAAGCCGATTGCTACGTCCATGCACCGGCTAAAGATATCAGAAAAATAAGGGAATCAGAAGCAATCAAGGAAAAGCTAAATGTCCTTAAAG AAAAAAGATCA CTA TTAGATAAAATCGGGCAGGAAAAACTCTCCACTCCCTCTGCATGTGAATCGGATGTTCAATCATGGGTTGAGAAAATGCGTGAGAAAGAACGAATTCAGAAACAAGCCGAAGAAAGAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD122668             [                                                                                              TCTGATAGGACTGCTACTAGTCGAGATGATCAATCACCTAGTGATATTGGAGGC ACTGGTGTTGATATTTCTCTCTCAATTGCGGAAACAAATGCTTTGAGAGCTAAGCTGGGTCTTGCCCCTCTGGATACTGATGATACTACAAAATCAGAACGAGCATTAGATAACCAAGCCGATTGCTACGTCCATGCACCGGCTAAAGATATCAGAAAAATAAGGGAATCAGAAGCAATCAAGGAAAAGCTAAATGTCCTTAAAG AAAAAAGATCA CTA TTAGATAAAATCGGGCAGGAAAAACTCTCCACTCCCTCTGCATGTGAATCGGATGTTCAATCATGGGTTGAGAAAATGCGTGAGAAAGAACGAATTCAGAAACAAGCCGAAGAAAGAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD122687             [                                                                                              TCTGATAGGACTGCTACTAGTCGAGATGATCAATCACCTAGTGATATTGGAGGC ACTGGTGTTGATATTTCTCTCTCAATTGCGGAAACAAATGCTTTGAGAGCTAAGCTGGGTCTTGCCCCTCTGGATACTGATGATACTACAAAATCAGAACGAGCATTAGATAACCAAGCCGATTGCTACGTCCATGCACCGGCTAAAGATATCAGAAAAATAAGGGAATCAGAAGCAATCAAGGAAAAGCTAAATGTCCTTAAAG AGAAAAGATCA CTA TTAGATAAAATCGGGCAGGAAAAACTCTCCACTCCCTCTGCATGTGAATCGGATGTTCAATCATGGGTTGAGAAAATGCGTGAGAAAGAACGAATTCAGAAACAAGCCGAAGAAAGAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD179265             [                                                                                               CTGATAGGACTGCTACTAGTCGAGATGATCAATCACCTAGTGATATTGGAGGC ACTGGTGTTGATATTTCTCTCTCAATTGCGGAAACAAATGCTTTGAGAGCTAAGCTGGGTCTTGCCCCTCTGGATACTGATGATACTACAAAATCAGAACGAGCATTAGATAACCAAGCCGATTGCTACGTCCATGCACCGGCTAAAGATATCAGAAAAATAAGGGAATCAGAAGCAATCAAGGAAAAGCTAAATGTCCTTAAAGAAAAAAAGATCA CTA TTAGATAAAATCGGGCAGGAAAAACTCTCCACTCCCTCTGCATGTGAATCGGATGTTCAATCATGGGTTGAGAAAATGCGTGAGAAAGAACGAATTCAGAAACAAGCCGAAGAAAGAGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD160809             [                                                                                               gTGATAGGACTGCTACTAGTCGAGATGGTCAATCACCTAGTGATATTGGAGGC ACTGGTGTTGATATTTCTCTCTCAATTGCGGAAACAAATGCTTTGAGAGCTAAGCTGGGTCTTGCCCCTCTGGATACTGATGATACTACAAAATCAGAACGAGCATTAGATAACCAAGCCGATTGCTACGTCCATGCACCGGCTAAAGATATCAGAAAAATAAGGGAATCAGAAGCAATCAAGGAAAAGCTAAATGTCCTTAAAG AAAGAAGATCA CTA TTAGATAAAATCGGGCAGGAAAAACTCTCCACTCCCTCTGCATGTGAATCGGATGTTCAATCATGGGTTGAG AAATGCGTGAGAAAGAACGAATTCAGAAACAAGCCGAAGAAAGAGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD153386             [                                                                                                                            CAATCACCTAGTGATATTGGAGGC ACTGGTGTTGATATTTCTCTCTCAATTGCGGAAACAAATGCTTTGAGAGCTAAGCTGGGTCTTGCCCCTCTGGATACTGATGATACTACAAAATCAGAACGAGCATTAGATAACCAAGCCGATTGCTACGTCCATGCACCGGCTAAAGATATCAGAAAAATAAGGGAATCAGAAGCAATCAAGGAAAAGCTAAATGTCCTTAAAG AAAAAAGATCA CTA TTAGATAAAATCGGGCAGGAAAAACTCTCCACTCCCTCTGCATGTGAATCGGATGTTCAATCATGGGTTGAGAAAATGCGTGAGAAAGAACGAATTCAGAAACAAGCCGAGGAAAGAGCTAAGCTGTTATCTGAGATTGACGATCAGTTGGCTGTTTCTGAGTTTGTAGAGTCAAGGTTGATTCAAAATGATAAAAAGTACAAACCCAATGATTTGGCTGGTCTTCGCGTCGAACATAGTTCGTCTCGTTTTGTTGACGGTCAATCAGTTATCCTGACGATTAAAGACTCAGGTGTTTTGGATGAATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD179244             [                                                                                                                                                                                                                                      GATACTACAAAATCAGAACGAGCATTAGATAACCAAGCCGATTGCTACGTCCATGCACCGGCTAAAGATATCAGAAAAATAAGGGAATCAGAAGCAATCAAGGAAAAGCTAAATGTCCTTAAAG AAAAAAGATCA CTA TTAGATAAAATCGGGCAGGAAAAACTCTCCACTCCCTCTGCATGTGAATCGGATGTTCAATCATGGGTTGAGAAAATGCGTGAGAAAGAACGAATTCAGAAACAAGCCGAAGAAAGAGCTAAGCTGTTATCTGAGATTGACGATCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD160907             [                                                                                                                                                                                                                                       ATACTACAAAATCAGAACGAGCATTAGATAACCAAGCCGATTGCTACGTCCATGCACCGGCTAAAGATATCAGAAAAATAAGGGAATCAGAAGCTATCAAGGAAAAGCTAAATGTCCTTAAAG AAAAAAGATCA CTA TTAGATAAAATCGGGCAGGAAAAACTCTCCACTCCCTCTGCATGTGAATCGGATGTTCAATCATGGGTTGAGAAAATGCGTGAGAAAGAACGAATTCAGAAACAAGCCGAAGAAAGAGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD179334             [                                                                                                                                                                                                                                      ggTACTACAAAATCAGAACGAGCATTAGATAACCAAGCCGATTGCTACGTCCATGCACCGGCTAAAGATATCAGAAAAATAAGGGAATCAGAAGCAATCAAGGAAAAGCTAAATGTCCTTAAAG AAAAAAGATCA CTA TTAGATAAAATCGGGCAGGAAAAACTCTCCACTCCCTCTGCATGTGAATCGGATGTTCAATCATGGGTCGAGAAAATGCGTGAGAAAGAACGAATTCAGAAACAAGCCGAAGAAAGAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD068014             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACGGTCAATCAGTTATCCTGACGATTAAAGACTCAGGTGTTTTGGATGAATCTGAAGATGTTTTAGTGAATGTAAATATAATTGATGATGAAAAAGCTGATGTCAATAGAGAAAATATAAGAAAGACCGCCGGTTTGGCTGGAATCGAAGATGAAGTTGATGAGGATGTACTTCTTGGTTTACGTTCTAAAGCTGTCCTTAGCAAGTATGATTCAGAGATTAATGGCATTAAGAAGGACCACTTTGTTATTAATTCTGATGGCTCTTATAATACAGAGGATGAACGTTTATTGAAACAACTACAAGCTGAACTGAAAGAAGGAAGACAATCATTACCTGATACTGAGCTTCGTATAGCTTCTGAGTACTACAGTTCGGAAGAAATGGCTGCGAAATTTAAAAAGCGTAAACGTCGTATCAAAACTATTCGTCAAGCACTGACTGCTGATGAACTTTTGAGTGAATTGCCGGAACAATTAAGCTCTTCTGATTTAGGAAGCCGTTCAACAGTTAGAGAAAGTCGCTTAAATAGTAACATCCCATCTGCAAATGACACATTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD152153             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    acCCGTTCAACAGTTAGAGAAAGTCGCTTAAATAGTAACATCCCATCTGCAAATGACACATTTTCTGCTGAAGAATTTTCTGCACAAATAATAGATGTCAAAGATAGTTACGAAGAATATTGGTCAGCAGCAGATCATATCGACGAACCAGATGAATTGAGAAGTGAATTAGAGAAAACTATTGGGCGAGTGATGCAATCGAAGTCACGGGTTGCTTCTAAACCGGAAGAAATTACATCACAACTCTTAGCAAAAAAACATAGCTACTCATTCATCCGAATCCGTGTCACAGTCACTTGTGTCTGATACATCGACATATAATAGCAAGAAAGACAATGTTGTGTTCGACTCTACTGCAGAATTCTATAAGTCGATTGGTATTGGTTTTCAAGAAAGTATGAAAAGAAATACTCGTTACAATCAATTCTTACAAAACCAATCTAGATTACAGAATAATGGCGGGGCAGTTGGTACTAATGATGATGATGATATGATTTCACANGGATACAA]
[+] EMBL CD071797             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATATTGGTCAGCAGCAGATCATATCGACGAACCAGATGAATTGAGAAGTGAATTAGAGAAAACTATTGGGCGAGTGATGCAATCGAAGTCACGGGTTGTTTCTAAACCGGAAGAAATTACATCACAACTCTTAGC AAAAAACATAGCTACTCATTCATCCGAATCCGTGTCACAGTCACTTGTGTCTGATACATCGACGAATAATAGCAAGAAAGACAATGTTGTGTTCGACTCTACTGCACAATTTTATAAGTCGATTGGTATTGGTCTTCAGGACAGTATGAAAAGAGAT                                                                                                     ]
[+] EMBL CD071799             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACCGGAACAAATTACATCACAACTCTTAGC AAAAAACATAGCTACTCATTCATCCGAATCCGTGTCACAGTCACTTGTGTCTGATACATCGACAAATAATAGCAAGAAAGACAATGTTGTGTTCGACTCTACTGCACAATTTTATAAGTCGATTGGTATTGGTTTTCAGGAAAGTATGAAAAGAAATACTCGTTACAATCTATTCT                                                                                  ]




>consensus_10641#0
GGTTCACAGAATGACTCGGGGGTCCCCTCATCGATCTCACAAAAAACATCGTCACAAGAA
TCGTGATAGGTCTCGTTCTCCTCTGGACCAGATTTCTGATAGGACTGCTACTAGTCGAGA
TGATCAATCACCTAGTGATATTGGAGGCACTGGTGTTGATATTTCTCTCTCAATTGCGGA
AACAAATGCTTTGAGAGCTAAGCTGGGTCTTGCCCCTCTGGATACTGATGATACTACAAA
ATCAGAACGAGCATTAGATAACCAAGCCGATTGCTACGTCCATGCACCGGCTAAAGATAT
CAGAAAAATAAGGGAATCAGAAGCAATCAAGGAAAAGCTAAATGTCCTTAAAGAAAAAAG
ATCACTATTAGATAAAATCGGGCAGGAAAAACTCTCCACTCCCTCTGCATGTGAATCGGA
TGTTCAATCATGGGTTGAGAAAATGCGTGAGAAAGAACGAATTCAGAAACAAGCCGAAGA
AAGAGCTAAGCTGTTATCTGAGATTGACGATCAGTTGGCTGTTTCTGAGTTTGTAGAGTC
AAGGTTGATTCAAAATGATAAAAAGTACAAACCCAATGATTTGGCTGGTCTTCGCGTCGA
ACATAGTTCGTCTCGTTTTGTTGACGGTCAATCAGTTATCCTGACGATTAAAGACTCAGG
TGTTTTGGATGAATCTGAAGATGTTTTAGTGAATGTAAATATAATTGATGATGAAAAAGC
TGATGTCAATAGAGAAAATATAAGAAAGACCGCCGGTTTGGCTGGAATCGAAGATGAAGT
TGATGAGGATGTACTTCTTGGTTTACGTTCTAAAGCTGTCCTTAGCAAGTATGATTCAGA
GATTAATGGCATTAAGAAGGACCACTTTGTTATTAATTCTGATGGCTCTTATAATACAGA
GGATGAACGTTTATTGAAACAACTACAAGCTGAACTGAAAGAAGGAAGACAATCATTACC
TGATACTGAGCTTCGTATAGCTTCTGAGTACTACAGTTCGGAAGAAATGGCTGCGAAATT
TAAAAAGCGTAAACGTCGTATCAAAACTATTCGTCAAGCACTGACTGCTGATGAACTTTT
GAGTGAATTGCCGGAACAATTAAGCTCTTCTGATTTAGGAAGCCGTTCAACAGTTAGAGA
AAGTCGCTTAAATAGTAACATCCCATCTGCAAATGACACATTTTCTGCTGAAGAATTTTC
TGCACAAATAATAGATGTCAAAGATAGTTACGAAGAATATTGGTCAGCAGCAGATCATAT
CGACGAACCAGATGAATTGAGAAGTGAATTAGAGAAAACTATTGGGCGAGTGATGCAATC
GAAGTCACGGGTTGCTTCTAAACCGGAAGAAATTACATCACAACTCTTAGCAAAAAACAT
AGCTACTCATTCATCCGAATCCGTGTCACAGTCACTTGTGTCTGATACATCGACAAATAA
TAGCAAGAAAGACAATGTTGTGTTCGACTCTACTGCACAATTTTATAAGTCGATTGGTAT
TGGTTTTCAGGAAAGTATGAAAAGAAATACTCGTTACAATCAATTCTTACAAAACCAATC
TAGATTACAGAATAATGGCGGGGCAGTTGGTACTAATGATGATGATGATATGATTTCACA
NGGATACAA

consensusID : consensus_10641#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 510
fasta sequence

                              [CTGGTAGCCTGTCGTCGATAAATAGTAACATCCCATCTGCAAATGACACATTTTCTGCTGAAGAATTTTCTGCACAAATAATAGATGTCAAAGATAGTTACGAAGAATATTGGTCAGCAGCAGATCATATCGACGAACCAGATGAATTGAGAAGTGAATTAGAGAAAACTATTGGGCGAGTGATGCAATCGAAGTCACGGGTTGTTTCTAAACCGGAAGAAATTACATCACAACTCTTAGCAAAAAAACATAGCTACTCATTCATCCGAATCCGTGTCACAGTCACTTGTGTCTGATACATCGACAAATAATAGCAAGAAAGACAATGTTGTGTTCGACTCTACTGCAGAATTTTATAAGTCGATTGGTATTGGTTTTCAAGAAAGTATGAAAAGAAATACTCGTTACAATCAATTCTTACAAAACCAATCTAGATTACAGAATAATGGCGGGGCAGTTGGTACTAATGATGATGATGATACGAGTTCATCACCTACAAGATTGCCCGTA]

[+] EMBL CD152117             [CTGGTAGCCTGTCGTCGATAAATAGTAACATCCCATCTGCAAATGACACATTTTCTGCTGAAGAATTTTCTGCACAAATAATAGATGTCAAAGATAGTTACGAAGAATATTGGTCAGCAGCAGATCATATCGACGAACCAGATGAATTGAGAAGTGAATTAGAGAAAACTATTGGGCGAGTGATGCAATCGAAGTCACGGGTTGTTTCTAAACCGGAAGAAATTACATCACAACTCTTAGCAAAAAAACATAGCTACTCATTCATCCGAATCCGTGTCACAGTCACTTGTGTCTGATACATCGACAAATAATAGCAAGAAAGACAATGTTGTGTTCGACTCTACTGCAGAATTTTATAAGTCGATTGGTATTGGTTTTCAAGAAAGTATGAAAAGAAATACTCGTTACAATCAATTCTTACAAAACCAATCTAGATTACAGAATAATGGCGGGGCAGTTGGTACTAATGATGATGATGATACGAGTTCATCACCTACA            ]
[+] EMBL CD152015             [                              TCCCATCTGCAAATGACACATTTTCTGCTGAAGAATTTTCTGCACAAATAATAGATGTCAAAGATAGTTACGAAGAATATTGGTCAGCAGCAGATCATATCGACGAACCAGATGAATTGAGAAGTGAATTAGAGAAAACTATTGGGCGAGTGATGCAATCGAAGTCACGGGTTGTTTCTAAACCGGAAGAAATTACATCACAACTCTTAGCAAAAAAACATAGCTACTCATTCATCCGAATCCGTGTCACAGTCACTTGTGTCTGATACATCGACAAAT ATAGCNAGAAg                                                                                                                                                                                             ]
[+] EMBL CD152013             [                              TCCCATCTGCAAATGACACATTTTCTGCTGAAGAATTTTCTGCACAAATAATAGATGTCAAAGATAGTTACGAAGAATATTGGTCAGCAGCAGATCATATCGACGAACCAGATGAATTGAGAAGTGAATTAGAGAAAACTATTGGGCGAGTGATGCAATCGAAGTCACGGGTTGTTTCTAAACCGGAAGAGATTACATCACAACTCTTAGCAGAAAAACATAGCTACTCATTCATCCGAATCCGTGTCACAGTCACTTGTGTCTGATACATCGAnca                                                                                                                                                                                                           ]
[+] EMBL CD201271             [                                                                                              TAGTTACGAAGAATATTGGTCAGCAGCAGATCATATCGACGAACCAGATGAATTGAGAAGTGAATTAGAGAAAACTATTGGGCGAGTGATGCAATCGAAGTCACGGGTTGTTTCTAAACCGGAAGAAATTACATCACAACTCTTAGC AAAAAACATAGCTACTCATTCATCCGAATCCGTGTCACAGTCACTTGTGTCTGATACATCGACAAATAATAGCAAGAAAGACAATGTTGTGTTCGACTCTACTGCAGAATTTTATAAGTCGATTGGTATTGGTTTTCAAGAAAGTATGAAAAGAAATACTCGTTACAATCAATTCTTACAAAACCAATCTAGATTACAGAATAATGGCGGGGCAGTTGGTACTAATGATGATGATGATACGAGTTCATCACCTACNAGATTGCCCGTA]




>consensus_10641#1
CTGGTAGCCTGTCGTCGATAAATAGTAACATCCCATCTGCAAATGACACATTTTCTGCTG
AAGAATTTTCTGCACAAATAATAGATGTCAAAGATAGTTACGAAGAATATTGGTCAGCAG
CAGATCATATCGACGAACCAGATGAATTGAGAAGTGAATTAGAGAAAACTATTGGGCGAG
TGATGCAATCGAAGTCACGGGTTGTTTCTAAACCGGAAGAAATTACATCACAACTCTTAG
CAAAAAAACATAGCTACTCATTCATCCGAATCCGTGTCACAGTCACTTGTGTCTGATACA
TCGACAAATAATAGCAAGAAAGACAATGTTGTGTTCGACTCTACTGCAGAATTTTATAAG
TCGATTGGTATTGGTTTTCAAGAAAGTATGAAAAGAAATACTCGTTACAATCAATTCTTA
CAAAACCAATCTAGATTACAGAATAATGGCGGGGCAGTTGGTACTAATGATGATGATGAT
ACGAGTTCATCACCTACAAGATTGCCCGTA

consensusID : consensus_10641#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 413
fasta sequence

                              [CCCAAGTGCATTGACACAGATAGTTACGAACAATATTGGTCAGCGGCAGATCTTATCGACGAACCAGATGAATTGAGAAGTGAATTAGAGAAAACTATTGGGCGAGTGATGCAATCGAAGTCACGGGTTGTTTCTAAACCGGAAGAAATTACATCACAACTCTTAGCAAAGAACATAGCTACTCATTCATCCGAATCCGTGTCACAGTCACTTGTGTCTGATACATCGACAAATAATAGCAAGAAAGACAATGTTGTGTTCGACTCTACTGCAGAATTTTATAAGTCGATTGGTATTGGTTTTCAAGAAAGTATGAAAAGAAATACTCGTTACAATCAATTCTTACGAAACCAATCTAGATTACAGAATAATGGCGGGGCAGTTGGTACTAATGATGATGATGATACGAGCTC]

[+] EMBL CD071795             [CCCAAGTGCATTGACACAGATAGTTACGAACAATATTGGTCAGCGGCAGATCTTATCGACGAACCAGATGAATTGAGAAGTGAATTAGAGAAAACTATTGGGCGAGTGATGCAATCGAAGTCACGGGTTGTTTCTAAACCGGAAGAAATTACATCACAACTCTTAGCAAAGAACATAGCTACTCATTCATCCGAATCCGTGTCACAGTCACTTGTGTCTGATACATCGACAAATAATAGCAAGAAAGACAATGTTGTGTTCGACTCTACTGCAGAATTTTATAAGTCGATTGGTATTGGTTTTCAAGAAAGTATGAAAAGAAATACTCGTTACAATCAATTCTTACGAAACCAATCTAGATTACAGAATAATGGCGGGGCAGTTGGTACTAATGATGATGATGATACGAGCTC]




>consensus_10641#2
CCCAAGTGCATTGACACAGATAGTTACGAACAATATTGGTCAGCGGCAGATCTTATCGAC
GAACCAGATGAATTGAGAAGTGAATTAGAGAAAACTATTGGGCGAGTGATGCAATCGAAG
TCACGGGTTGTTTCTAAACCGGAAGAAATTACATCACAACTCTTAGCAAAGAACATAGCT
ACTCATTCATCCGAATCCGTGTCACAGTCACTTGTGTCTGATACATCGACAAATAATAGC
AAGAAAGACAATGTTGTGTTCGACTCTACTGCAGAATTTTATAAGTCGATTGGTATTGGT
TTTCAAGAAAGTATGAAAAGAAATACTCGTTACAATCAATTCTTACGAAACCAATCTAGA
TTACAGAATAATGGCGGGGCAGTTGGTACTAATGATGATGATGATACGAGCTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10641#1      ------------------------------------------------------------
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      GGTTCACAGAATGACTCGGGGGTCCCCTCATCGATCTCACAAAAAACATCGTCACAAGAA 60
                                                                                   

consensus_10641#1      ------------------------------------------------------------
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      TCGTGATAGGTCTCGTTCTCCTCTGGACCAGATTTCTGATAGGACTGCTACTAGTCGAGA 120
                                                                                   

consensus_10641#1      ------------------------------------------------------------
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      TGATCAATCACCTAGTGATATTGGAGGCACTGGTGTTGATATTTCTCTCTCAATTGCGGA 180
                                                                                   

consensus_10641#1      ------------------------------------------------------------
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      AACAAATGCTTTGAGAGCTAAGCTGGGTCTTGCCCCTCTGGATACTGATGATACTACAAA 240
                                                                                   

consensus_10641#1      ------------------------------------------------------------
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      ATCAGAACGAGCATTAGATAACCAAGCCGATTGCTACGTCCATGCACCGGCTAAAGATAT 300
                                                                                   

consensus_10641#1      ------------------------------------------------------------
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      CAGAAAAATAAGGGAATCAGAAGCAATCAAGGAAAAGCTAAATGTCCTTAAAGAAAAAAG 360
                                                                                   

consensus_10641#1      ------------------------------------------------------------
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      ATCACTATTAGATAAAATCGGGCAGGAAAAACTCTCCACTCCCTCTGCATGTGAATCGGA 420
                                                                                   

consensus_10641#1      ------------------------------------------------------------
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      TGTTCAATCATGGGTTGAGAAAATGCGTGAGAAAGAACGAATTCAGAAACAAGCCGAAGA 480
                                                                                   

consensus_10641#1      ------------------------------------------------------------
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      AAGAGCTAAGCTGTTATCTGAGATTGACGATCAGTTGGCTGTTTCTGAGTTTGTAGAGTC 540
                                                                                   

consensus_10641#1      ------------------------------------------------------------
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      AAGGTTGATTCAAAATGATAAAAAGTACAAACCCAATGATTTGGCTGGTCTTCGCGTCGA 600
                                                                                   

consensus_10641#1      ------------------------------------------------------------
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      ACATAGTTCGTCTCGTTTTGTTGACGGTCAATCAGTTATCCTGACGATTAAAGACTCAGG 660
                                                                                   

consensus_10641#1      ------------------------------------------------------------
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      TGTTTTGGATGAATCTGAAGATGTTTTAGTGAATGTAAATATAATTGATGATGAAAAAGC 720
                                                                                   

consensus_10641#1      ------------------------------------------------------------
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      TGATGTCAATAGAGAAAATATAAGAAAGACCGCCGGTTTGGCTGGAATCGAAGATGAAGT 780
                                                                                   

consensus_10641#1      ------------------------------------------------------------
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      TGATGAGGATGTACTTCTTGGTTTACGTTCTAAAGCTGTCCTTAGCAAGTATGATTCAGA 840
                                                                                   

consensus_10641#1      ------------------------------------------------------------
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      GATTAATGGCATTAAGAAGGACCACTTTGTTATTAATTCTGATGGCTCTTATAATACAGA 900
                                                                                   

consensus_10641#1      ------------------------------------------------------------
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      GGATGAACGTTTATTGAAACAACTACAAGCTGAACTGAAAGAAGGAAGACAATCATTACC 960
                                                                                   

consensus_10641#1      ------------------------------------------------------------
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      TGATACTGAGCTTCGTATAGCTTCTGAGTACTACAGTTCGGAAGAAATGGCTGCGAAATT 1020
                                                                                   

consensus_10641#1      ------------------------------------------------------------
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      TAAAAAGCGTAAACGTCGTATCAAAACTATTCGTCAAGCACTGACTGCTGATGAACTTTT 1080
                                                                                   

consensus_10641#1      --------------------------------------------------CTGGTAGCCT 10
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      GAGTGAATTGCCGGAACAATTAAGCTCTTCTGATTTAGGAAGCCGTTCAACAGTTAGAGA 1140
                                                                                   

consensus_10641#1      GTCGTCGATAAATAGTAACATCCCATCTGCAAATGACACATTTTCTGCTGAAGAATTTTC 70
consensus_10641#2      ------------------------------------------------------------
consensus_10641#0      AAGTCGCTTAAATAGTAACATCCCATCTGCAAATGACACATTTTCTGCTGAAGAATTTTC 1200
                                                                                   

consensus_10641#1      TGCACAAATAATAGATGTCAAAGATAGTTACGAAGAATATTGGTCAGCAGCAGATCATAT 130
consensus_10641#2      --CCCAAGTGC--ATTGACACAGATAGTTACGAACAATATTGGTCAGCGGCAGATCTTAT 56
consensus_10641#0      TGCACAAATAATAGATGTCAAAGATAGTTACGAAGAATATTGGTCAGCAGCAGATCATAT 1260
                         * *** *      ** ** ************* ************* ******* ***

consensus_10641#1      CGACGAACCAGATGAATTGAGAAGTGAATTAGAGAAAACTATTGGGCGAGTGATGCAATC 190
consensus_10641#2      CGACGAACCAGATGAATTGAGAAGTGAATTAGAGAAAACTATTGGGCGAGTGATGCAATC 116
consensus_10641#0      CGACGAACCAGATGAATTGAGAAGTGAATTAGAGAAAACTATTGGGCGAGTGATGCAATC 1320
                       ************************************************************

consensus_10641#1      GAAGTCACGGGTTGTTTCTAAACCGGAAGAAATTACATCACAACTCTTAGCAAAAAAACA 250
consensus_10641#2      GAAGTCACGGGTTGTTTCTAAACCGGAAGAAATTACATCACAACTCTTAGCAAAGAA-CA 175
consensus_10641#0      GAAGTCACGGGTTGCTTCTAAACCGGAAGAAATTACATCACAACTCTTAGCAAAAAA-CA 1379
                       ************** *************************************** ** **

consensus_10641#1      TAGCTACTCATTCATCCGAATCCGTGTCACAGTCACTTGTGTCTGATACATCGACAAATA 310
consensus_10641#2      TAGCTACTCATTCATCCGAATCCGTGTCACAGTCACTTGTGTCTGATACATCGACAAATA 235
consensus_10641#0      TAGCTACTCATTCATCCGAATCCGTGTCACAGTCACTTGTGTCTGATACATCGACAAATA 1439
                       ************************************************************

consensus_10641#1      ATAGCAAGAAAGACAATGTTGTGTTCGACTCTACTGCAGAATTTTATAAGTCGATTGGTA 370
consensus_10641#2      ATAGCAAGAAAGACAATGTTGTGTTCGACTCTACTGCAGAATTTTATAAGTCGATTGGTA 295
consensus_10641#0      ATAGCAAGAAAGACAATGTTGTGTTCGACTCTACTGCACAATTTTATAAGTCGATTGGTA 1499
                       ************************************** *********************

consensus_10641#1      TTGGTTTTCAAGAAAGTATGAAAAGAAATACTCGTTACAATCAATTCTTACAAAACCAAT 430
consensus_10641#2      TTGGTTTTCAAGAAAGTATGAAAAGAAATACTCGTTACAATCAATTCTTACGAAACCAAT 355
consensus_10641#0      TTGGTTTTCAGGAAAGTATGAAAAGAAATACTCGTTACAATCAATTCTTACAAAACCAAT 1559
                       ********** **************************************** ********

consensus_10641#1      CTAGATTACAGAATAATGGCGGGGCAGTTGGTACTAATGATGATGATGATACGAGTTCAT 490
consensus_10641#2      CTAGATTACAGAATAATGGCGGGGCAGTTGGTACTAATGATGATGATGATACGAGCTC-- 413
consensus_10641#0      CTAGATTACAGAATAATGGCGGGGCAGTTGGTACTAATGATGATGATGATATGATTTCA- 1618
                       *************************************************** **  **  

consensus_10641#1      CACCTACAAGATTGCCCGTA 510
consensus_10641#2      --------------------
consensus_10641#0      CANGGATACAA--------- 1629