cluster # 10642

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Schistosoma mansoni
cluster # 10642 cluster # 10642 Sequences # 19 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10642#0 length = 1028 sequences # 7
consensus_10642#1 length = 649 sequences # 4

consensus_10642#2 length = 617 sequences # 6
consensus_10642#3 length = 367 sequences # 1
consensus_10642#4 length = 236 sequences # 1

consensusID : consensus_10642#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1028
fasta sequence

                              [TTTTTTTTTTTTTTTTTTAGGATAAAACTAAATGCATTTAGCTTCATATCATTTGAATACAAATTTGTGAAATATTTTGTCTTGGAATTCAGCAGCATTTTTCAACGTCGGCGACGATCGTCTCGACCTCTTCGTCCACGTGATTCATCACGTCTACCATTCATTTCTCTCACAAAAGGCGGTGAATAGGTTGCACGAGGCCCCCGGGGTATTCGAGAGCGTGAAAAGTCACTGTAGCCTCCACGGCCGCGCATGTCGAGATGGCGACTCATACTCCTGCCGTCATATGATTCCGGTGGGCTTCGACCTCGT-GGTCTTCCCACTGGAACACCTAATGGACTTCGACTCCTT-CGTCGTGATATTGGAGAATGTCCTC-TTTGGTTCACTGGTAACGGGA-TCTCCC-GGGAGATGATCGACGACG-TGAATGACTTTGTAGGGACCGTATGAATTCCGCAGACGGGAGGAAAGGTAGCATAGACTGATAGCTTGATGGCCCGTAGGGGTAGCCCGACGCAGCATTGGTTACTTCTGATGAGTGAAAAGAAGAAAACTGGTCGTAATCAGGATAACGG-TGACCGTTGTATGACGAATCTCTGTTGCTGTGACGAGGGGAATTTCGGCGCCTAAATGAGCCCCTGCCACCTGATCGACCACCATGAAACGCTGACCCGATAGCTGAATTGAAATGAAGACGAAGCCGTGTTACGTCGTGCAAATAATTCGTAGTCCATCTTTCGAATACGTTTAAAACGGTGCTTACCGCTTTTAGTACGACCACCGTGCGCGAACTCGACTCTGATTCTTGAGCCACAAACGTTGACACCATTAAGAGATCTTACTGCTNTCTCAGCATCCGATGACCTTACATATTCGGCGAATGCGAATCCTGGTGGGTTTCTGGCAACCCACACATCAACTAATTCACCACACTTANGACACTCGCGGACTAGATCATCTTTGAGGATGTTTTCTACTANACCACCGATATATAACTTCCGGCATTTCTCTTGGAAACCTGGAGACATGTT]

[+] EMBL AI395543             [TTTTTTTTTTTTTTTTTTAGGAAAAAACTAAATGCATTTAGCTTCATATCATTTGAATACAAATTTGTGAAATATTTTGTCTTGGAATTCAGCAACATTTTTCAACGTCGGCGACGATCGTCTCGACCTCTTCGTCCACGTGATTCATCACGTCTACCATTCATTTCTCTCACAAAAGGCGGTGAATAGGTTGCACGAGGCCCCCGGGGTATTCGAGAGCGTGAAAAGTCACTGTAGCCTCCACGGCCGCGCATGTCGAGATGGCGACTCATACTCCTGCCGTCATATGA TCCGGTGGGCTTCGACC CGTGGGTCTTCCCACTGGAACACCTAATGGAC TCCACTCCTTCCGTCGTGATATTGGAGAATGTCCTCTTTTGGGTCACTGGGAACGGGA TCTCCCGGGGAGATGATCGACGACGTTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AI395624             [TTTTTTTTTTTTTTTTNTAGGATAAAACTAAATGCATTTAGCTTCATATCATTTGAATACAAATTTGTGAAATATTTTGTCTTGGAATTCAGCAGCATTTTTCAACGTCGGCGACGATCGTCTCGACCTCTTCGTCCACGTGATTCATCACGTCTACCATTCATTTCTCTCACAAAAGGCGGTGAATAGGTTGCACGAGGCCCCCGGGGTATTCGAGAGCGTGAAAAGTCACTGTAGCCTCCACGGCCGCGCATGTCGAGATGGCGACTCATACTCCTGCCGTCATATGA TCCGGGGGGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AI395295             [  TTTTTTTTTTTTTTTTAGGATAAAACTAAATGCATTTAGCTTCATATCATTTGAATACAAATTTGTGAAATATTTTGTCTTGGAATTCAGCAGCATTTTTCAACGTCGGCGACGATCGTCTCGACCTCTTCGTCCACGTGATTCATCACGTCTACCATTCATTTCTCTCACAAAAGGCGGTGAATAGGTTGCACGAGGCCCCCGGGGTATTCGAGAGCGTGAAAAGTCACTGTAGCCTCCACGGCCGCGCATGTCGAGATGGCGACTCATACTCCTGCCGTCATATGATTCCGGTGGGCTTCGACCTCGT GGTCTTCCTACTGGAACACCTAATGGACTTCGACTCCCT CGTCGTGATATTGG GAATGTCCTC TTTGG TCACTGGTAACGGGA TCTCCC GGGAAATGATCGACGACG TGAATGACTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD137859             [                                                         TACAAATTTGTGAAATA TTTGTCTTGGAATTCAGCAGCA TTTTCAACGTCGGCGACGATCGTTTTGACCTCTTCGTCANCGTGATTCATCACGTCTACCATTCATTTCTCTCACAAAAGGCGGTGAATAGGTTGCACGAGGCCCCCGGGGTATTCGAGAGCGTGAAAAGTCACTGTAGCCTCCACGGCCGCGCATGTCGAGATGGCGACTCATACTCCTGCCGTCATATGATTCCGGTGGGCTTCGACCTCGT GGTCTTCCTACTGGAACACCTAATGGACTTCGACTCCTT CGTCGTGATATTGGAGAATGTCCTC TTTGGTTCACTGGTAACGGGATTCTCCC GGGAGATGATCGACGACG TGAATGACTTTGTAGGGACCGTATGAATTCCGCAGACGGGAGGAAAGGTAGCATAGACTGATAGCTTGATGGCCCGTAGGGGTAGCCCGACGCAGCATTGGTTACTTCTGATGAGTGAAAAGAAGAAAACTGGTCGTAATCAGGATAACGG TGACCGTTGTATGACGAATCTCTGTTGCTGTGACGAGGGGAATTTCGGCGCCTAAATGAGCCCCTGCCACCTGA                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD112436             [                                                                                                                                                                          CACAAAAGGCGGTGAATAGGTTGCACGAGGCCCCCGGGGTATTCGAGAGCGTGAAAAGTCACTGTAGCCTCCACGGCCGCGCATGTCGAGATGGCGACTCATACTCCTGCCGTCATATGATTCCGGTGGGCTTCGACCTCGT GGTCTTCCCACTGGAACACCTAATGGACTTCGACTCCTT CGTCGTGATATTGGAGAATGTCCTC TTTGGTTCACTGGTAACGGGATTCTCCC GGGAGATGATCGACGACG TGAATGACTTTGTAGGGACCGTATGAATTCCGCAGACGGGAGGAAAGGTAGCATAGACTGATAGCTTGATGGCCCGTAGGGGTAGCCCGACGCAGCATTGGTTACTTCTGATGAGTGAAAAGAAGAAAACTGGTCGTAATCAGGATAACGG TGACCGTTGTATGACGAATCTCTGTTGCTGTGACGAGGGGAATTTCGGCGCCTAAATGAGCCCCTGGCA                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD183321             [                                                                                                                                                                                                                                                                                                                                                                                                                 TCTCCC GGGAGATGATCGACGACG TGAATGACTTTGTAGGGACCGTATGAATTCCGCAGACGGGAGGAAAGGTAGCATAGACTGATAGCTTGATGGCCCGTAGGGGTAGCCCGACGCAGCATTGGTTACTTCTGATGAGTGAAAAGAAGAAAACTGGTCGTAATCAGGATAACGGATGACCGTTGTATGACGAATCTCTGTTGCTGTGACGAGGGGAATTTCGGCGCCTAAATGAGCCCCTGCCACCTGATCGACCACCATGAAACGCTGACCCGATAGCTGAATTGAAATGAAGACGAAGCCGTGTTACGTCGTGCAAATAATTCGTAGTCCATCTTTCGAATACGTTTAAAACGGTGCTTACCGCTTTTAGTACGACCACCGTGCGCGAACTCGACTCTGATTCTTGAGCCACAAACGTTGACACCATTAAGAGATCTTACTGCTNTCTCAGCATCCGATGACCTTACATATTCGGCGAATGCGAATCCTGGTGGGTTTCTGGCAACCCACACATCAACTAATTCACCACACTTANGACACTCGCGGACTAGATCATCTTTGAGGATGTTTTCTACTANACCACCGATATATAACTTCCGGCATTTCTCTTGGAAACCTGGAGACATGTT]
[+] EMBL CD166110             [                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGACCGTATGAATTCCGCAGACGGGAGGAAAGGTAGCATAGACTGATAGCTTGATGGCCCGTAGGGGTAGCCCGACGCAGCATTGGTTACTTCTGATGAGTGAAAAGAAGAAAACTGGTCGTAATCAGGATAACGG TGACCGTTGTATGACGAATCTCTGTTGCTGTGACGAGGGGAA TTCGGCGCCT AATGAG CCCTGCCA CTGATCGACCA CATG AACGCTGA CCGATAGCTGAATTG AATG AGACGAg                                                                                                                                                                                                                                                                                                                                            ]




>consensus_10642#0
TTTTTTTTTTTTTTTTTTAGGATAAAACTAAATGCATTTAGCTTCATATCATTTGAATAC
AAATTTGTGAAATATTTTGTCTTGGAATTCAGCAGCATTTTTCAACGTCGGCGACGATCG
TCTCGACCTCTTCGTCCACGTGATTCATCACGTCTACCATTCATTTCTCTCACAAAAGGC
GGTGAATAGGTTGCACGAGGCCCCCGGGGTATTCGAGAGCGTGAAAAGTCACTGTAGCCT
CCACGGCCGCGCATGTCGAGATGGCGACTCATACTCCTGCCGTCATATGATTCCGGTGGG
CTTCGACCTCGTGGTCTTCCCACTGGAACACCTAATGGACTTCGACTCCTTCGTCGTGAT
ATTGGAGAATGTCCTCTTTGGTTCACTGGTAACGGGATCTCCCGGGAGATGATCGACGAC
GTGAATGACTTTGTAGGGACCGTATGAATTCCGCAGACGGGAGGAAAGGTAGCATAGACT
GATAGCTTGATGGCCCGTAGGGGTAGCCCGACGCAGCATTGGTTACTTCTGATGAGTGAA
AAGAAGAAAACTGGTCGTAATCAGGATAACGGTGACCGTTGTATGACGAATCTCTGTTGC
TGTGACGAGGGGAATTTCGGCGCCTAAATGAGCCCCTGCCACCTGATCGACCACCATGAA
ACGCTGACCCGATAGCTGAATTGAAATGAAGACGAAGCCGTGTTACGTCGTGCAAATAAT
TCGTAGTCCATCTTTCGAATACGTTTAAAACGGTGCTTACCGCTTTTAGTACGACCACCG
TGCGCGAACTCGACTCTGATTCTTGAGCCACAAACGTTGACACCATTAAGAGATCTTACT
GCTNTCTCAGCATCCGATGACCTTACATATTCGGCGAATGCGAATCCTGGTGGGTTTCTG
GCAACCCACACATCAACTAATTCACCACACTTANGACACTCGCGGACTAGATCATCTTTG
AGGATGTTTTCTACTANACCACCGATATATAACTTCCGGCATTTCTCTTGGAAACCTGGA
GACATGTT

consensusID : consensus_10642#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 649
fasta sequence

                              [TTAATACAATACAGGAAGGAAACGGGAATGAACAAAGAATTTATCGCTCAATTACGTCGATGACATCTAGACAAGTCTATGACAGTTAAGAAATCTTTGAGAACTAGATGTTAGGATAAAACTAAATGCATTTAGCTTCATATCATTTGAATACAAATTTGTGAAATATTTTGTCTTGGAATTCAGCAGCATTTTTCAACGTCGGCGACGATCGTCTCGACCTCTTCGTCCACGTGATTCATCACGTCTACCATTCATTTCTCTCACAAAAGGCGGTGAATAGGTTGCACGAGGCCCCCGGGGTATTCGAGAGCGTGAAAAGTCACTGTAGCCTCCACGGCCGCGCATGTCGAGATGGCGACTCATACTCCTGCCGTCATATGATTCCGGTGGGCTTCGACCTCGTGGTCTTCCCACTGGAACACCTAATGGACTTCGACTCCTGAAAGAAACCAAAAATAAGCATCGTAAAGACTGGCAGCGCAGTTGGTATAAAGTAATGGAGAAACCTAATTTCAAGTAAAAGTTTCCAATTTTTGATTTTGAAGTCAAATTTTATGTAAGCGGACTTAAATATCGAAGATAACTTCTGAATTCTAGGTGATTTACCGAAGAATAGGTGAAGCATCCACTGTTAGATTCATATTGA]

[-] EMBL CD149303             [TTAATACAATACAGGAAGGAAACGGGAATGAACAAAGAATTTATCGCTCAATTACGTCGATGACATCTAGACAAGTCTATGACAGTTAAGAAATCTTTGAGAACTAGATGTTAGGATAAAACTAAATGCATTTAGCTTCATATCATTTGAATACAAATTTGTGAAATATTTTGTCTTGGAATTCAGCAGCATTTTTCAACGTCGGCGACGATCGTCTCGACCTCTTCGTCCACGTGATTCATCACGTCTACC                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD077233             [                                                                                                                         CTAAATGCATTTAGCTTCATATCATTTGAATACAAATTTGTGAAATATTTTGTCTTGGAATTCAGCAGCATTTTTCAACGTCGGCGACGATCGTCTCGACCTCTTCGTCCACGTGATTCATCACGTCTACCATTCATTTCTCTCACAAAAGGCGGTGAATAGGTTGCACGAGGCCCCCGGGGTATTCGAGAGCGTGAAAAGTCACTGTAGCCTCCACGGCCGCGCATGTCGAGATGGCGACTCATACTCCTGCCGTCATATGATTCCGGTGGGCTTCGACCTCGTGGTCTTCCCACTGGAACACCTAATGGACTTCGACTCCTGAAAGAAACCAAAAATAAGCATCGTAAAGACTGGCAGCGCAGTTGGTATAAAGTAATGGAGAAACCTAATTTCAAGTAAAAGTTTCCAATTTTTGATTTTGAAGTCAAATTTTATGTAAGCGGACTTAAATATCGAAGATAACTTCTGAATTCTAGGTGATTTACCGAAGAATAGGTGAAGCATCCACTGTTAGATTCATATTGA]
[-] EMBL CD137725             [                                                                                                                                                               TGTGAAATATTTTGTCTTGGAATTCAGCAGCATTTTTCAACGTCGGCGACGATCGTCTCGACCTCTTCGTCCACGTGATTCATCACGTCTACCATTCATTTCTCTCACAAAAGACGGTGAATAGGTTGCACGAGGCCCCCGGGGTATTCGAGAGCGTGAAAAGTCACTGTAGCCTCCACGGCCGCGCATGTCGAGATGGCGACTCATACT                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD067528             [                                                                                                                                                                                                                                                                                                           GGGGTATTCGAGAGCGTGAAGAGTCACTGTAGCCTCCACGGCCGCGCATGTCGAGATGGCGACTCATACTCCTGCCGTCATATGATTCCGGTGGGCTTCGACCTCGTGGTCTTCCTACTGGAACACCTAATGGACTTCGACTCCTGAAAGAANCCAAAAATAAGCATCGTAGAGACTGGCAGCGCAGTTGGTATAAAGTAATGGAGAAACCTAATTTCAAGTAAAAGTTTCCAATTTTTGATTTTCAAGTCAAATTTTGTGTAAGGGG                                                                                  ]




>consensus_10642#1
TTAATACAATACAGGAAGGAAACGGGAATGAACAAAGAATTTATCGCTCAATTACGTCGA
TGACATCTAGACAAGTCTATGACAGTTAAGAAATCTTTGAGAACTAGATGTTAGGATAAA
ACTAAATGCATTTAGCTTCATATCATTTGAATACAAATTTGTGAAATATTTTGTCTTGGA
ATTCAGCAGCATTTTTCAACGTCGGCGACGATCGTCTCGACCTCTTCGTCCACGTGATTC
ATCACGTCTACCATTCATTTCTCTCACAAAAGGCGGTGAATAGGTTGCACGAGGCCCCCG
GGGTATTCGAGAGCGTGAAAAGTCACTGTAGCCTCCACGGCCGCGCATGTCGAGATGGCG
ACTCATACTCCTGCCGTCATATGATTCCGGTGGGCTTCGACCTCGTGGTCTTCCCACTGG
AACACCTAATGGACTTCGACTCCTGAAAGAAACCAAAAATAAGCATCGTAAAGACTGGCA
GCGCAGTTGGTATAAAGTAATGGAGAAACCTAATTTCAAGTAAAAGTTTCCAATTTTTGA
TTTTGAAGTCAAATTTTATGTAAGCGGACTTAAATATCGAAGATAACTTCTGAATTCTAG
GTGATTTACCGAAGAATAGGTGAAGCATCCACTGTTAGATTCATATTGA

consensusID : consensus_10642#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 617
fasta sequence

                              [TGGAACACCTAATGGACTTCGACTCNTTCGTCGTGATATTGGAGAATGTCCTCTTTGGTTCACTGGTAACGGGATTCTCCCGGGAGATGATCGACGACGTGAATGACTTTGTAGGGACCGTATGAATTCCGCAGACGGGAGGAAAGGTAGCATAGACTGATAGCTTGATGGCCCGTAGGGGTAGCCCGACGCAGCATTGGTTACTTCTGATGAGTGAAAAGAAGAAAACTGGTCGTAATCAGGATAACGGTGACCGTTGTATGACGAATCTCTGTTGCTGTGACGAGGGGAATTTCGGCGCCTAAATGAGCCCCTGCCACCTGATCGACCACCATGAAACGCTGACCCGATAGCGCTTTTAGTACGACCACCGTGCGCGAACTCGACTCTGATTCTTGAGCCACAAACGTTGACACCATTAAGAGATCTTACTGCTTTCTCAGCATCCGATGACCTTACATATTCGGCGAATGCGAATCCTGGTGGGTTTCTGGCAACCCACACATCAACTAATTCACCACACTTAGACAACTCGCGGACTAAATCATCTTTGAGGATGTTTTCTACTAAACCACCGATATATAACTTCCGGCATTTCTCTTGGAAACCTGAAGACA]

[-] EMBL CD079279             [TGGAACACCTAATGGACTTCGACTCNTTCGTCGTGATATTGGAGAATGTCCTCTTTGGTTCACTGGTAACGGGATTCTCCCGGGAGATGATCGACGACGTGAATGACTTTGTAGGGACCGTATGAATTCCGCAGACGGGAGGAAAGGTAGCATAGACTGATAGCTTGATGGCCCGTAGGGGTAGCCCGACGCAGCATTGGTTACTTCTGATGAGTGAAAAGAAGAAAACTGGTCGTAATCAGGATAACGGTGACCGTTGTATGACGAATCTCTGTTGCTGTGACGAGGGGAATTTCGGCGCCTAAATGAGCCCCTGCCACCTGATCGACCACCATGAAACGCTGACCCGATAGCGCTTTTAGTACGACCACCGTGCGCGAACTCGACTCTGATTCTTGAGCCACAAACGTTGACACCATTAAGAGATCTTACTGCTTTCTCAGCATCCGATGACCTTACATATTCGGCGAATGCGAATCCTGGTGGGTTTCTGGCAACCCACACATCAACTAATTCACCACACTTAGACAACTCGCGGACTAAATCATCTTTGAGGATGTTTTCTACTAAACCACCGATATATAACTTCCGGCATTTCTCTTGGAAACCTGAAGACA]
[+] EMBL CD186824             [                                                                          TTCTCCCGGGAGATGATCGACGACGTGAATGACTTTGTAGGGACCGTATGAATTCCGCAGACGGGAGGAAAGGTAGCATAGACTGATAGCTTGATGGCCCGTAGGGGTAGCCCGACGCAGCATTGGTTACTTCTGATGAGTGAAAAGAAGAAAACTGGTCGTAATCAGGATAACGGTGACCGTTGTATGACGAATCTCTGTTGCTGTGACGAGGGGAATTTCGGCGCCTAAATGAGCCCCTGCCACCTGATCGACCACCATGAAACGCTGACCCGATAGCGCTTTTAGTACGACCACCGTGCGCGAACTCGACTCTGATTCTTGAGCCACAAACGTTGACACCATTAAGAGATCTTACTGCTTTCTCAGCATCCGATGACCTTACATATTCGGCGAATGCGAATCCTGGTGGGTTTCTGGCAACCCACACATCAACTAATTCACC                                                                                                  ]
[+] EMBL CD163961             [                                                                                                           TTTGTAAGGACCGTATGAATTCCGCAGACGGGAGGAAAGGTAGCATAGACTGATAGCTTGATGGCCCGTAGGGGTAGCCCGACGCAGCATTGGTTACTTCTGATGAGTGAAAAGAAGAAAACTGGTCGTAATCAGGATAACGGTGACCGTTGTATGACGAATCTCTGTTGCTG                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD163976             [                                                                                                           TTTGTAGGGACCGTATGAATTCCGCAGACGGGAGGAAAGGTAGCATACACTGATAGCTTGATGGCCCGTAGGGGTAGCCCGACGCAACATTGGTTACTTCTGATGAGAGAAAAGAATAAAACTGGTCGTAATCAGGATAACGGTGACCG                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD149500             [                                                                                                                 GGGACCGTATGAATTCCGCAGACGGGAGGAAAGGTAGCATAGACTGATAGCTTGATGGCCCGTAGGGGTAGCCCGACGCAGCATTGGTTACTTCTGATGAGTGAAAAGAAGAAAACTGGTCGTAATCAGGATAACGGTGACCGTTGTATGACGAATCTCTGTTGCTGTGACGAGGGGAATTTCGGCGCCTAAATGAGCCCCTGCCACCTGATCGACCACCATGAAACGCTGACCCGATAGCGCTTTTAGTACGACCACCGTGCGCGAACTCGACTNTGATTCTTGAGCCACAAACGTTGACACCATTAAGAGATC                                                                                                                                                                                             ]
[+] EMBL BG932399             [                                                                                                                                          aAGGAAAGGTAGCATATACTGATAGCTTGATGGCCCGTAGGGGTAGCCCGACGCAGCATTGGTTACTTCTGATGAGTGAAAAGAAGAAAACTGGTCGTAATCAGGATAACGGTGACCGTTGTATGACGAATCTCTGTTGCTGTGACGAGGGGAATTTCGGCGCCTAAATGAGCCCCT                                                                                                                                                                                                                                                                                                              ]




>consensus_10642#2
TGGAACACCTAATGGACTTCGACTCNTTCGTCGTGATATTGGAGAATGTCCTCTTTGGTT
CACTGGTAACGGGATTCTCCCGGGAGATGATCGACGACGTGAATGACTTTGTAGGGACCG
TATGAATTCCGCAGACGGGAGGAAAGGTAGCATAGACTGATAGCTTGATGGCCCGTAGGG
GTAGCCCGACGCAGCATTGGTTACTTCTGATGAGTGAAAAGAAGAAAACTGGTCGTAATC
AGGATAACGGTGACCGTTGTATGACGAATCTCTGTTGCTGTGACGAGGGGAATTTCGGCG
CCTAAATGAGCCCCTGCCACCTGATCGACCACCATGAAACGCTGACCCGATAGCGCTTTT
AGTACGACCACCGTGCGCGAACTCGACTCTGATTCTTGAGCCACAAACGTTGACACCATT
AAGAGATCTTACTGCTTTCTCAGCATCCGATGACCTTACATATTCGGCGAATGCGAATCC
TGGTGGGTTTCTGGCAACCCACACATCAACTAATTCACCACACTTAGACAACTCGCGGAC
TAAATCATCTTTGAGGATGTTTTCTACTAAACCACCGATATATAACTTCCGGCATTTCTC
TTGGAAACCTGAAGACA

consensusID : consensus_10642#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 367
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTGGAATGAACAAAGAATTTATCGCTCAATTACGTCGATGACATCTAGACAAGTCTATGACAGTTAAGAAATCTTTGAGAACTAGATGTTAGGATAAAACTAAATGCATTTAGCTTCATATCATTTGAATACAAATTTGTGAAATATTTTGTCTTGGAATTCAGCAGCATTTTTCAACGTCGGCGACGATCGTCTCGACCTCTTCGTCCACGTGATTCATCACGTCTACCATTCATTTCTCTCACAAAAGGCGGTGAATAGGTTGCACGAGGCCCCCGGGGTATTCGAGAGCGTGAAAAGTCACTGTAGCCTCCACGGGCGCGCATGTCGAGATGGCGACTCATATCCC]

[+] EMBL AI395237             [TTTTTTTTTTTTTTTTTTTTGGAATGAACAAAGAATTTATCGCTCAATTACGTCGATGACATCTAGACAAGTCTATGACAGTTAAGAAATCTTTGAGAACTAGATGTTAGGATAAAACTAAATGCATTTAGCTTCATATCATTTGAATACAAATTTGTGAAATATTTTGTCTTGGAATTCAGCAGCATTTTTCAACGTCGGCGACGATCGTCTCGACCTCTTCGTCCACGTGATTCATCACGTCTACCATTCATTTCTCTCACAAAAGGCGGTGAATAGGTTGCACGAGGCCCCCGGGGTATTCGAGAGCGTGAAAAGTCACTGTAGCCTCCACGGGCGCGCATGTCGAGATGGCGACTCATATCCC]




>consensus_10642#3
TTTTTTTTTTTTTTTTTTTTGGAATGAACAAAGAATTTATCGCTCAATTACGTCGATGAC
ATCTAGACAAGTCTATGACAGTTAAGAAATCTTTGAGAACTAGATGTTAGGATAAAACTA
AATGCATTTAGCTTCATATCATTTGAATACAAATTTGTGAAATATTTTGTCTTGGAATTC
AGCAGCATTTTTCAACGTCGGCGACGATCGTCTCGACCTCTTCGTCCACGTGATTCATCA
CGTCTACCATTCATTTCTCTCACAAAAGGCGGTGAATAGGTTGCACGAGGCCCCCGGGGT
ATTCGAGAGCGTGAAAAGTCACTGTAGCCTCCACGGGCGCGCATGTCGAGATGGCGACTC
ATATCCC

consensusID : consensus_10642#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 236
fasta sequence

                              [TCTGATTCTTGAGCCACAAACGTTGACACCATTAAGAGATCTTACTGCTATCTCAGCATCCGATGACCTTACATATTCGGCGAATGCGAATCCTGGTGGGTTTCTGGCAACCCACACATCAACTAATTCACCACACTTAGACAACTCGCGGACTAAATCATCTTTGAGGATGTTTTCTACTAAACCACCGATATATAACTTCCGGCATTTCTCCCTCGGACCGAATTCGTGGCCGC]

[-] EMBL CD077897             [TCTGATTCTTGAGCCACAAACGTTGACACCATTAAGAGATCTTACTGCTATCTCAGCATCCGATGACCTTACATATTCGGCGAATGCGAATCCTGGTGGGTTTCTGGCAACCCACACATCAACTAATTCACCACACTTAGACAACTCGCGGACTAAATCATCTTTGAGGATGTTTTCTACTAAACCACCGATATATAACTTCCGGCATTTCTCCCTCGGACCGAATTCGTGGCCGC]




>consensus_10642#4
TCTGATTCTTGAGCCACAAACGTTGACACCATTAAGAGATCTTACTGCTATCTCAGCATC
CGATGACCTTACATATTCGGCGAATGCGAATCCTGGTGGGTTTCTGGCAACCCACACATC
AACTAATTCACCACACTTAGACAACTCGCGGACTAAATCATCTTTGAGGATGTTTTCTAC
TAAACCACCGATATATAACTTCCGGCATTTCTCCCTCGGACCGAATTCGTGGCCGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10642#2      ------------------------------------------------------------
consensus_10642#4      ------------------------------------------------------------
consensus_10642#0      TTTTTTTTTTTTTTTTTTAGGATAAAACTAAATGCATTTAGCTTCATATCATTTGAATAC 60
consensus_10642#1      ------------------------------------------------------------
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#2      ------------------------------------------------------------
consensus_10642#4      ------------------------------------------------------------
consensus_10642#0      AAATTTGTGAAATATTTTGTCTTGGAATTCAGCAGCATTTTTCAACGTCGGCGACGATCG 120
consensus_10642#1      ------------------------------------------------------------
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#2      ------------------------------------------------------------
consensus_10642#4      ------------------------------------------------------------
consensus_10642#0      TCTCGACCTCTTCGTCCACGTGATTCATCACGTCTACCATTCATTTCTCTCACAAAAGGC 180
consensus_10642#1      ------------------------------------------------------------
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#2      ------------------------------------------------------------
consensus_10642#4      ------------------------------------------------------------
consensus_10642#0      GGTGAATAGGTTGCACGAGGCCCCCGGGGTATTCGAGAGCGTGAAAAGTCACTGTAGCCT 240
consensus_10642#1      ------------------------------------------------------------
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#2      ------------------------------------------------------------
consensus_10642#4      ------------------------------------------------------------
consensus_10642#0      CCACGGCCGCGCATGTCGAGATGGCGACTCATACTCCTGCCGTCATATGATTCCGGTGGG 300
consensus_10642#1      ------------------------------------------------------------
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#2      -----------------------TGGAACACCTAATGGACTTCGACTCNTTCGTCGTGAT 37
consensus_10642#4      ------------------------------------------------------------
consensus_10642#0      CTTCGACCTCGTGGTCTTCCCACTGGAACACCTAATGGACTTCGACTCCTTCGTCGTGAT 360
consensus_10642#1      -------------------------------------TTAATACAATACAGGAAGGAAAC 23
consensus_10642#3      -----------------------------------------TTTTTTTTTTTTTTTTTTT 19
                                                                                   

consensus_10642#2      ATTGGAGAATGTCCTCTTTGGTTCACTGGTAACGGGATTCTCCCGGGAGATGATCGACGA 97
consensus_10642#4      ------------------------------------------------------------
consensus_10642#0      ATTGGAGAATGTCCTCTTTGGTTCACTGGTAACGGGAT-CTCCCGGGAGATGATCGACGA 419
consensus_10642#1      GGGAATGAACAAAGAATTTATCGCTCAATTACGTCGATGACATCTAGACAAGTCTATGAC 83
consensus_10642#3      TGGAATGAACAAAGAATTTATCGCTCAATTACGTCGATGACATCTAGACAAGTCTATGAC 79
                                                                                   

consensus_10642#2      CGTGAATGACTTTGTAGGGACCGTATGAATTCCGCAGACGGGAGGAAAGGTAGCATAGAC 157
consensus_10642#4      ------------------------------------------------------------
consensus_10642#0      CGTGAATGACTTTGTAGGGACCGTATGAATTCCGCAGACGGGAGGAAAGGTAGCATAGAC 479
consensus_10642#1      AGTTAAGAAATCTTTGAGAACTAGATGTTAGGATAAAACTAAATGCATTTAGCTTCATAT 143
consensus_10642#3      AGTTAAGAAATCTTTGAGAACTAGATGTTAGGATAAAACTAAATGCATTTAGCTTCATAT 139
                                                                                   

consensus_10642#2      TGATAGCTTGATGGCCCGTAGGGGTAGCCCGACGCAGCATTGGTTACTTCTGATGAGTGA 217
consensus_10642#4      ------------------------------------------------------------
consensus_10642#0      TGATAGCTTGATGGCCCGTAGGGGTAGCCCGACGCAGCATTGGTTACTTCTGATGAGTGA 539
consensus_10642#1      CATTTGAATACAAATTTGT-GAAATATTTTGTCTTGGAATTCAGCAGCATTTTTCAACGT 202
consensus_10642#3      CATTTGAATACAAATTTGT-GAAATATTTTGTCTTGGAATTCAGCAGCATTTTTCAACGT 198
                                                                                   

consensus_10642#2      AAAGAAGAAAACTGGTCGTAATCAGGATAACGGTGACCGTTGTATGACGAATCTCTGTTG 277
consensus_10642#4      ------------------------------------------------------------
consensus_10642#0      AAAGAAGAAAACTGGTCGTAATCAGGATAACGGTGACCGTTGTATGACGAATCTCTGTTG 599
consensus_10642#1      CGGCGACGATCGTCTCGACCTCTTCGTCCACGTGATTCAT--CACGTCTACCATTCATTT 260
consensus_10642#3      CGGCGACGATCGTCTCGACCTCTTCGTCCACGTGATTCAT--CACGTCTACCATTCATTT 256
                                                                                   

consensus_10642#2      CTGTGACGAGGGGAATTTCGGCGCCTAAATGAGCCCCTGCCACCTGATCGACCACCATGA 337
consensus_10642#4      ------------------------------------------------------------
consensus_10642#0      CTGTGACGAGGGGAATTTCGGCGCCTAAATGAGCCCCTGCCACCTGATCGACCACCATGA 659
consensus_10642#1      CTCTCACAAAAGGCGGTGAATAGGTTGCACGAGGCCC--CCGGGGTATTCGAGAGCGTGA 318
consensus_10642#3      CTCTCACAAAAGGCGGTGAATAGGTTGCACGAGGCCC--CCGGGGTATTCGAGAGCGTGA 314
                                                                                   

consensus_10642#2      AACGCTGACCCGATAGC------------------------------------------- 354
consensus_10642#4      ------------------------------------------------------------
consensus_10642#0      AACGCTGACCCGATAGCTGAATTGAAATGAAGACGAAGCCGTGTTACGTCGTGCAAATAA 719
consensus_10642#1      AAAGTCACTGTAGCCTCCA-------------------CGGCCGCGCATGTCGAGATGGC 359
consensus_10642#3      AAAGTCACTGTAGCCTCCA-------------------CGGGCGCGCATGTCGAGATGGC 355
                                                                                   

consensus_10642#2      ------------------------------------------GCTTTTAGTACGACCACC 372
consensus_10642#4      ------------------------------------------------------------
consensus_10642#0      TTCGTAGTCCATCTTTCGAATACGTTTAAAACGGTGCTTACCGCTTTTAGTACGACCACC 779
consensus_10642#1      GACTCATACTCCTGCCGTCATATGATTCCGGTGGGCTTCGACCTCGTGGTCTTCCCACTG 419
consensus_10642#3      GACTCATATCCC------------------------------------------------ 367
                                                                                   

consensus_10642#2      GTGCGCGAACTCGACTCTGATTCTTGAGCCACAAACGTTGACACCATTAAGAGATCTTAC 432
consensus_10642#4      ---------------TCTGATTCTTGAGCCACAAACGTTGACACCATTAAGAGATCTTAC 45
consensus_10642#0      GTGCGCGAACTCGACTCTGATTCTTGAGCCACAAACGTTGACACCATTAAGAGATCTTAC 839
consensus_10642#1      GAACACCTAATGGACTTCGACTCCTGAAAGAAACCAAAAATAAGCATCGTAAAGACTGGC 479
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#2      TGCTTTCTCAGCATCCGATGACCTTACATATTCGGCGAATGCGAATCCTGGTGGGTTTCT 492
consensus_10642#4      TGCTATCTCAGCATCCGATGACCTTACATATTCGGCGAATGCGAATCCTGGTGGGTTTCT 105
consensus_10642#0      TGCTNTCTCAGCATCCGATGACCTTACATATTCGGCGAATGCGAATCCTGGTGGGTTTCT 899
consensus_10642#1      AGCGCAGTTGGTATAAAGTAATGGAGAAACCTAATTTCAAGTAAAAGTTTCCAA-TTTTT 538
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#2      GGCAACCCACACATCAACTAATTCACCACACTTAGACAACTCGCGGACTAAATCATCTTT 552
consensus_10642#4      GGCAACCCACACATCAACTAATTCACCACACTTAGACAACTCGCGGACTAAATCATCTTT 165
consensus_10642#0      GGCAACCCACACATCAACTAATTCACCACACTTANGACACTCGCGGACTAGATCATCTTT 959
consensus_10642#1      GATTTTGAAGTCAAATTTTATGTAAGCGGACTTAAATATCGAAGATAACTTCTGAATTCT 598
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#2      GAGGATGTTTTCTACTAAACCACCGATATATAACTTCCGGCATTTCTCTTGGAAACCTGA 612
consensus_10642#4      GAGGATGTTTTCTACTAAACCACCGATATATAACTTCCGGCATTTCTCCCTCGGACC-GA 224
consensus_10642#0      GAGGATGTTTTCTACTANACCACCGATATATAACTTCCGGCATTTCTCTTGGAAACCTGG 1019
consensus_10642#1      -AGGTGATTTACCGAAGAATAGGTGAAGCATCCACTGTTAGATTCATATTGA-------- 649
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#2      AGACA------- 617
consensus_10642#4      ATTCGTGGCCGC 236
consensus_10642#0      AGACATGTT--- 1028
consensus_10642#1      ------------
consensus_10642#3      ------------