These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10643#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 2312 fasta sequence [TTGTTGGCGCGCTTTTCTCCTGCGATCGTTCGGCGGATCTAGATTTCCGGACAGGGTTTAATATGTCTGAGAGCATAAAGGTCATTTGCCGCGTAAGGCCGCTCAATGATCTAGAAAAGGCGAACGACAGCAAGTTTGTTGTATCGTTTCCTGGTGATGGCAAAACAGCAATATCAATTGGAGGAAAAAACTTTAACTTTGACCATGTAGTACAACCTAAAGCAACTCAGTTAGAAGTCTACGAAATTGTTGCCAAACCAATTGTTGCAGATGTTCTCAATGGATATAACGGCACAATTTTCGCTTACGGTCAGACGTCGAGTGGGAAAACATTTACTATGGAGGGGATTTTAGGTGACCCAGTCTTTCAGGGTGTTATTCCCCGGATAATACACGACATATTCAATCACATTTACCAAATGGATGAAAACCTTGAATTCCATATCAAAGTTTCATATTTTGAAATATATATGGATAAGATTCGCGATTTGCTTGATGTTCGAAGACAAATCTACCTGTCCATGAAGATAAAGATCGAGTGCCTTATGTTAAGGGAGCCACAGAACGGTTTGTGTCTAGTCCTGAGGAGGTATTTGACGTCATTGATGAGGGGAAAGCCAATCGTCATGTAGCCGTAACAAACATGAACGAACATAGTTCTCGAAGTCATTCAGTATTCATGATTACTGTTCGACAAGAAAATTTAGAGACACAAAAAAAACTCCATGGAAAACTTTATCTTGTTGATCTGGCTGGTAGTGAGAAAGTTGCTAAAACAGGAGCTGAAGGCACTGTTTTGGATGAAGCTAAAAATATTAACAAATCATTGTCTGCCCTCGGTAATGTGATCAATGCACTTGTGGAAGGAAGCTCGCACGTTCCTTACCGTGACTCAAAGTTGACACGTATTCTTCAAGAATCTCTGGGTGGTAATGCACGAACAACAATGGTGATATGTTGTTCACCAGCTGCTTTTAACGATGCTGAGACAAAATCAACTCTTATGTTTGGCATGCGCG-CTAAAACGATCAAGAACTTAGTCACTGTAAATGAAGAACTAACTGCCGATGAGTGGCGACGACGATACGAACGTGAAAAAGAG-AAAGTTAGGAGACTTCCAAATATTGTATCTCACTTGGAAAGTGAACTTAAACGTTGGCGAGGTGGTGAGTCCGTCAGTCAAGCTGAATGGTTTACAGGAACTCAATATTTAGCTGCCATAGATGATACAAAGGACATAACAACTCCAGATGTATTTCCAACTAAACTTATGTCAGATAGCATTTCAGCAACTACACC-ACAAGGTGTCCAACTATCAAATACATCTCAAGCGAGCACCGCTTCACTTCCATCATCTCGTGTCGCTGCCATTAGTGATACTTTAAGTTCCACTGCGGGTGGTGTCGGTGATGAACAACTACAGTTACTTTATCAACAACTTGATGATAAAGATGATGAAATTAATAAACAAGCTCAAACAATTGCTCGTCTTCGACAACAAGTTGAAGAACAAGATGAAATCATCAATACTTTACGTAAAGAACGTGAAGGTCAACTGAAAGAGATCACAAACCTTCAAGCTGAATATCAATCAAGTAAAGAAGAGGTTAAAGAAGTTTTACAAGCTTTAGAAGAATTAGCTATGAATTATGATCAAAAAGCACAAGAGATTGCTTCAAAAGCAAAAGAATTAGAAGATGTCCAAGAATCTTTATTAAAACAAACTAGATTAATGCATAGTAAAGATGGTGAATTATCTCAATTAAAAGATACACATCAAAATCAAAAGAAGAAATATACTGAAATGATGTCAAGTTTATTAAAAGATTTAATTGATGTTGGTGAATGTTTAAATGATCAGTTGACGAAACCATCTGTTGGTGCTGAACGATTAGATGAAGAATTCACTGTAGTTCGTTTATATATAAGTAAAATGAAAACTGAAGCAAAATCATTTCAATCCCGTGTACGTCAATTAGAAAAAGAACGTGTTCAACATGTGCAATTAATGCGTAAAAGTGATGATGAATCAAAAGATCTACGGACAAGACTTCATGCTTTTGAAGTAAAAATTGCCACATTAACCGATAAAATTGATGAATCCGAATCACGTTAACGCCATTTTCAAGAAACTGTAGATAATATGAATGCAGAAATAGCAAAACTTCGTGCCAATGAACAATTTATGTCTGGTTCAGGTGAACAAAATGAAAAAATTCTATTTGGGCAATCAGCTATACGAGCTTAATTAGATGAAGAATTTTAACGTCAATCAGAACATTATGCTGCCCAAGTGAAAAGTTTTCGTGATG] [+] EMBL CD166295 [TTGTTGGCGCGCTTTTCTCCTGCGATCGTTCGGCGGATCTAGATTTCCGGACAGGGTTTAATATGTCTGAGAGCATAAAGGTCATTTGCCGCGTAAGGCCGCTCAATGATCTAGAAAAGGCGAACGACAGCAAGTTTGTTGAATCGTTTCCTGGTGATGGCAAAACAGCAATATCAATTGGAGGAAAAAACTTTAACTTTGACCATGTAGTACAACCTAAAGCAACTCAGTTAGAAGTCTACGAAATTGTTGCCAAACCAATTGTTGCAGATGTTCTCAATGGATATAACGGCACAA ] [+] EMBL CD194231 [ AAAAGGCGAACGACAGCAAGTTTGTTGTATCGTTTCCTGGTGATGGCAAAACAGCAATATCAATTGGAGGAAAAAACTTTAACTTTGACCATGTAGTACAACCTAAAGCAACTCAGTTAGAAGTCTACGAAATTGTTGCCAAACCAATTGTTGCAGATGTTCTCAATGGATATAACGGCACAATTTTCGCTTACGGTCAGACGTCGAGTGGGAAAACATTTACTATGGAGGGGATTTTAGGTGACCCAGTCT ] [-] EMBL CD170803 [ ttTTGTATCGTTTCCTGGTGATGCCAAAACAGCAATATCAATTGGAGGAAAAAACTTTAACTTTGACCATGTAGTACAACCTAAAGCAACTCAGTTAGAAGTCTACGAAATTGTTGCCAAACCAATTGTTGCAGATGTTCTCAATGGATATAACGGCACAATTTTCGCTTACGGTCAGACGTCGAGTGGGAAAACATNTACTATGGAGGGGATTTTAGGTGACCCAGTCTTTCAGGGTGTTATTCCCCGGATAATACACGACATATTCAATCACATTTACCAAATGGATGAAAACCTTGAATTCCATATCAAAGTTTCATATTTTGAAATATATATGGATAAGATTCGCGATTTGCTTGATGTTCGAAGACAAATCTACCTGTCCATGAAGATAAAGATCGAGTGCCTTATGTTAAGGGAGCCACAGAACGGTTTGTGTCTAGTCCTGAGGAGGTATT ] [+] EMBL CD153881 [ AAGACAAATCTACCTGTCCATGAAGATAAAGATCGAGTGCCTTATGTTAAGGGAGCCACAGAACGGTTTGTGTCTAGTCCTGAGGAGGTATTTGACGTCATTGATGAGGGGAAAGCCAATCGTCATGTAGCCGTAACAAACATGAACGAACATAGTTCTCGAAGTCATTCAGTATTCATGATTACTGTTCGACAAGAAAATTTAGAGACACAAAAAAAACTCCATGGAAAACTTTATCTTGTTGATCTGGCTGGTAGTGAGAAAGTTGCTAAAACAGGAGCTGAAGGCACTGTTTTGGATGAAGCTAAAAATATTAACAAATCATTGTCTGCCCTCGGTAATGTGATCAATGCACTTGTGGAAGGAAGCTCGCACGTTCCTTACCGTGACTCAAAGTTGACACGTATTCTTCAAGAATCTCTGGGTGGTAATGCACGAACAACAATGGTGATATGTTGTTCACCAGCTGCTTTTAACGATGCTGAGACANAATCAACTCTTATGTTTGGCATGCGCG CT ANACGATCAAG ACTTAGTCACTGT AATGAAG ACTAACT ] [+] EMBL CD180788 [ CGAGTGCCTTATGTTAAGGGAGCCACAGAACGGTTTGTGTCTAGTCCTGAGGAGGTATTTGACGTCATTGATGAGGGGAAAGCCAATCGTCATGTAGCCGTAACAAACATGAACGAACATAGTTCTCGAAGTCATTCAGTATTCATGATTACTGTTCGACAAGAAAATTTAGAGACAC AAAAAAACTCCATGGAAAACTTTATCTT ] [+] EMBL CD110809 [ CAATCGTCATGTAGCCGTAACAAACATGAACGAACATAGTTCTCGAAGTCATTCAGTATTCATGATTACTGTTCGACAAGAAAATTTAGAGACACAAAAAAAACTCCATGGAAAACTTTATCTTGTTGATCTGGCTGGTAGTGAGAAAGTTGCTAAAACAGGAGCTGAAGGCACTGTTTTGGATGAAGCTAAAAATATTAACAAATCATTGTCTGCCCTCGGTAATGTGATCAATGCACTTGTGGAAGGAAGCTCGCACGTTCCTTACCGTGACTCAAAGTTGACACGTATTCTTCAAGAATCTCTGGGTGGTAATGCACGAACAACAATGGTGATATGTTGTTCACCAGCTGCTTTTAACGATGCTGAGACAAAATCAACTCTTATGTTTGGCATGCGCGTCT AAACGATCAAGAACTTAGTCACTGTAAATGAAGAACTAACTGCCGATGAGTGGCGACGACGATACGAACGTGAAAAAGAGAAAAGTTA GAGACTTTCAAATATTGTATCTCACTTGGAAAGTGAACT ] [-] EMBL CD193880 [ AAGAAAGTTTAGAGACACAAAAAAAACTCCATGGAAAACTTTATCTTGTTGATCTGGCTGGTAGTGAGAAAGTTGCTAAAACAGGAGCTGAAGGCACTGTTTTGGATGAAGCTAAAAATATTAACAAATCATTGTCTGCCCTCGGTAATGTGATCAATGCACTTGTGGAAGGAAGCTCGCACGTTCCTTACCGTGACTCA ] [+] EMBL CD069161 [ gtgtgatgTTGGATGAAGCTAAAAATATTAACAAATCATTGTCTGCCCTCGGTAATGTGATCAATGCACTTGTGGAAGGAAGCTCGCACGTTCCTTACCGTGACTCAAAGTTGACACGTATTCTTCAAGAATCTCTGGGTGGTAATGCACGAACAACAATGGTGATATGTTGTTCACCAGCTGCTTTTAACGATGCTGAGACAAAATCAACTCTTATGTTTGGCATGCGCG CTAAAACGATC ] [+] EMBL CD183953 [ TGTGACTAATGCACTTGTGGAAGGAAGCTCGCACGCTCCTTACCGTGACTCAAAGTTGACACGTATTCTTCAAGAATCTCTGGGTGGTAATGCACGAACAACAATGGTGATATGTTGTTCACCAGCTGCTTTTAACGATGCTGAGACAAAATCAACTCTTATGTTTGGCATGCGCG CTAAAAC ] [+] EMBL CD184029 [ TGTGACTAATGCACTTGTGGAAGGAAGCTCGCACGCTCCTTACCGTGACTCAAAGTTGACACGTATTCTTCAAGAATCTCTGGGTGGTAATGCACGAACAACAATGGTGATATGTTGTTCACCAGCTGCTTTTAACGATGCTGAGACAAAATCAACTCTTATGTTTGGCATGCGCG CTAAAAC ] [+] EMBL CD112475 [ TCGCACGTTCCTTACCGTGACTCAAAGTTGACACGTATTCTTCAAGAATCTCTGGGTGGTAATGCACGAACAACAATGGTGATATGTTGTTCACCAGCTGCTTTTAACGATGCTGAGACAAAATCAACTCTTATGTTTGGCATGCGCG CTAAAACGATCAAGAACTTAGTCACTGTAAATGAAGAACTAACTGCCGATGAGTGGCGACGACGATACGAACGTGAAAAAGAG AAAGTTAGGAGACTTCAAAATATTGTATCTCACTTGGAAAGTGAACTTAAACGTTGGCGAGGTGGTGAGTCCGTCAGTCAAGCTGAATGGTTTACAGGAACTCAATATTTAGCTGCCATAGATGATACAAAGGACATAACAACTCCAGATGTATTTCCAACTAAACTTATGTCAGATAGCATTTCAGCAACTACACC ACGAGGTGTCCAACTATCAA ] [-] EMBL CD068332 [ aATGCGCG CTAAAACGATCAAGAACTTAGTCACTGTAAATGAAGAACTAACTGCCGATGAGTGGCGACGACGATACGAACGTGAAAAAGAG AAAGTTAGGAGACGTCCAGATATTGTATCTCACTTGGAAAGTGAACGTAAACCTTGGCGAGGTGGTGAGTCTGTCAGTCAAGCTGAATGGTTTACAGAAACTCAATATTGAGCTGCCATAGATGATACAAAGGACATAACAACTCCAGATGTATTTCCAACTAAACTTATGTCAGATAGCATTTCAGCAACTACACCAACAAGGTGTCCAACTATCAAATACATCTCAAGCGAGCACCGCTTCACTTCCATCATCTCGTGTCGCTGCCATTAGTGATACTTTAAGTGCCACTGCGGGca ] [+] EMBL CD169031 [ CAAGGTGTCCAACTATCAAATACATCTCAAGCGAGCACCGCTTCACTTCCATCATCTCGTGTCGCTGCCATTAGTGATACTTTAAGTTCCACTGCGGGTGGTGTCGGTGATGAACAACTACAGTTGCTTTATCAACAACTTGATGATAAAGATGATGAAATTAATAAACAAGCTCAAACAATTGCTCGTCTTCGACAACAAGTTGAAGAACAAGATGAAATCATCAATACTTTACGTAAAGAACGTGAAGGTCAACTGAAAGAGATCACAAACCTTCAAGCTGAATATCAATCAAGTAAAGAAGAGGTTAAAGAAGTTTTACAAGCTTTAGAAGAATTAGCTATGAATTATGATCAAAAAGCACAAGAGATTGCTTCAAAAGCAAAAGAATTAGAAGATGTCCAAGAATCTTTATTAAAACAAACTAGATTAATGCATAGTAAAGATGGTGAATTATCTCAATTAAAAGATACACATCAAAATCAAAAGAAGAAATATACTGAAATGATGTCAAGTTTATTAAAAGATTTAATTGATGTTGGTGAATGTTTAAATGATCAGTTGACGAAACCATCTGTTGGTGCTGAACGATTAGATGAAGAATTCACTGTAGTTCGTTTATATATAAGTAAAATG ] [+] EMBL CD192293 [ GTGTCCAACTATCAAATACATCTCAAGCGAGCACCGCTTCACTTCCATCATCTCGTGTCGCTGCCATTAGTGATACTTTAAGTTCCACTGCGGGTGGTGTCGGTGATGAACAACTACAGTTACTTTATCAACAACTTGATGATAAAGATGATGAAATTAATAAACAAGCTCAAACAATTGCTCGTCTTCGACAACAAGTTGAAGAACAAGATGAAATCATCAATACTTTACGTAAAGAACGTGAAGGTCAACTGAAAGAGATCACAAACCTTCAAGCTGAATATCAATCAAGTAAAGAAGAGGTTAAAGAAGTTTTACAAGCTTTAGAAGAATTAGCTATGAATTATGATCAAAAAGCACAAGAGATTGCTTCAAAAGCAAAAGAATTAGAAGATGTCCAAGAATCTTTATTAAAACAAACTAGATTAATGCATAGTAAAGATGGTGAATTATCTCAATTAAAAGATACACATCCAAATCAAAAGAAGAAAT ] [+] EMBL CD192148 [ GTGTCCAACTATCAAATACATCTCAAGCGAGCACCGCTTCACTTCCATCATCTCGTGTCGCTGCCATTAGTGATACTTTAAGTTTCACTGCGGGTGGTGTCGGTGATGAACAACTACAGTTACTTTATCAACAACTTGATGATAAAGATGATGAAATTAATAAACAAGCTCAAACAATTGCTCGTCTTCGACAACAAGTTGAAGAACAAGATGAAATCATCAATACTTTACGTAAAGAACGTGAAGGTCAACTGAAAGAGATCACAAACCTTCAAGCTGAATATCAATCAAGTAAAGAAGAGGTTAAAGAAGTTTTACAAGCTTTAGAAGAATTAGCTATGAATTATGATCAAAAAGCACAAGAGATTGCTTCAAAAGCAAAAGAATTAGAAGATGTCCAAGAATCTTTATTAAAACAAACTAGATTAATGCATAGTAAAGATGGTGAATTATCTCAATTAAAAGATACACATCAAAATCAAAAGAAGAAAT ] [+] EMBL CD192053 [ GTGTCCAACTATCAAATACATCTCAAGCGAGCACCGCTTCACTTCCATCATCTCGTGTCGCTGCCATTAGTGATACTTTAAGTTTCACTGCGGGTGGTGTCGGTGATGAACAACTACAGTTACTTTATCAACAACTTGATGATAAAGATGATGAAATTAATAAACAAGCTCAAACAATTGCTCGTCTTCGACAACAAGTTGAAGAACAAGATGAAATCATCAATACTTTACGTAAAGAACGTGAAGGTCAACTGAAAGAGATCACAAACCTTCAAGCTGAATATCAATCAAGTAAAGAAGAGGTTAAAGAAGTTTTACAAGCTTTAGAAGAATTAGCTATGAATTATGATCAAAAAGCACAAGAGATTGCTTCAAAAGCAAAAGAATTAGAAGATGTCCAAGAATCTTTATTAAAACAAACTAGATTAATGCATAGTAAAGATGGTGAATTATCTCAATTAAAAGATACACATCAAAATCAAAAGAAGAAAT ] [+] EMBL CD192171 [ AACCTTCAAGCTGAATATCAATCAAGTAAAGAAGAGGTTAAAGAAGTTTTACAAGCTTTAGAAGAATTAGCTATGAATTATGATCAAAAAGCACAAGAGATTGCTTCAAAAGCAAAAGAATTAGAAGATGTCCAAGAATCTTTATTAAAACAAACTAGATTAATGCATAGTAAAGATGGTGAATTATCTCAATTAAAAGATACACATCAAAATCAAAAGAAGAAAT ] [-] EMBL AI977407 [ ACGAAACCATCTGTTGGTGCTGAACGATTAGATGAAGAATTCACTGTAGTTCGTTTATATATAAGTAAAATGAAAACTGAAGCAAAATCATTTCAATCCCGTGTACGTCAATTAGAAAAAGAACGTGTTCAACATGTGCAATTAATGCGTAAAAGTGATGATGAATCAAAAGATCTACGGACAAGACTTCATGCTTTTGAAGTAAAAATTGCCACATTAACCGATAAAATTGATGAATCCGAATCACGTTAACGCCATTTTCAAGAAACTGTAGATAATATGAATGCAGAAATAGCAAAACTTCGTGCCAATGAACAATTTATGTCTGGTTCAGGTGAACAAAATGAAAAAATTCTATTTGGGCAATCAGCTATACGAGCTTAATTAGATGAAGAATTTTAACGTCAATCAGAACATTATGCTGCCCAAGTGAAAAGTTTTCGTGATG] [+] EMBL CD195690 [ GAAGCAAAATCATTGCAATCCCGTGTACGTCAATTAGAAGAAGAACGTGTTCAACATGTACAATTAATGCGTAAAAGTGATGATGAATCAAAAGATCTACGTACAAGACTTCATGCTTTTGAAGTAAAAATTGCCACATTAACCGATAAAATTGATGAATCCGAATCACGTAAACGTCATTTACAAGAAACTGTAGATAATATGAATGCAGAAATAGCAAAACTTCGTGCCAATGAACAATTTATGTCTGGTTCAGGTGAACAAAATG AAAAATTCTATCTGGAC ATCAGCTATACGAGC TAATTAGATGAAGAATTTaa ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||