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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10643#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 2312 fasta sequence
[TTGTTGGCGCGCTTTTCTCCTGCGATCGTTCGGCGGATCTAGATTTCCGGACAGGGTTTAATATGTCTGAGAGCATAAAGGTCATTTGCCGCGTAAGGCCGCTCAATGATCTAGAAAAGGCGAACGACAGCAAGTTTGTTGTATCGTTTCCTGGTGATGGCAAAACAGCAATATCAATTGGAGGAAAAAACTTTAACTTTGACCATGTAGTACAACCTAAAGCAACTCAGTTAGAAGTCTACGAAATTGTTGCCAAACCAATTGTTGCAGATGTTCTCAATGGATATAACGGCACAATTTTCGCTTACGGTCAGACGTCGAGTGGGAAAACATTTACTATGGAGGGGATTTTAGGTGACCCAGTCTTTCAGGGTGTTATTCCCCGGATAATACACGACATATTCAATCACATTTACCAAATGGATGAAAACCTTGAATTCCATATCAAAGTTTCATATTTTGAAATATATATGGATAAGATTCGCGATTTGCTTGATGTTCGAAGACAAATCTACCTGTCCATGAAGATAAAGATCGAGTGCCTTATGTTAAGGGAGCCACAGAACGGTTTGTGTCTAGTCCTGAGGAGGTATTTGACGTCATTGATGAGGGGAAAGCCAATCGTCATGTAGCCGTAACAAACATGAACGAACATAGTTCTCGAAGTCATTCAGTATTCATGATTACTGTTCGACAAGAAAATTTAGAGACACAAAAAAAACTCCATGGAAAACTTTATCTTGTTGATCTGGCTGGTAGTGAGAAAGTTGCTAAAACAGGAGCTGAAGGCACTGTTTTGGATGAAGCTAAAAATATTAACAAATCATTGTCTGCCCTCGGTAATGTGATCAATGCACTTGTGGAAGGAAGCTCGCACGTTCCTTACCGTGACTCAAAGTTGACACGTATTCTTCAAGAATCTCTGGGTGGTAATGCACGAACAACAATGGTGATATGTTGTTCACCAGCTGCTTTTAACGATGCTGAGACAAAATCAACTCTTATGTTTGGCATGCGCG-CTAAAACGATCAAGAACTTAGTCACTGTAAATGAAGAACTAACTGCCGATGAGTGGCGACGACGATACGAACGTGAAAAAGAG-AAAGTTAGGAGACTTCCAAATATTGTATCTCACTTGGAAAGTGAACTTAAACGTTGGCGAGGTGGTGAGTCCGTCAGTCAAGCTGAATGGTTTACAGGAACTCAATATTTAGCTGCCATAGATGATACAAAGGACATAACAACTCCAGATGTATTTCCAACTAAACTTATGTCAGATAGCATTTCAGCAACTACACC-ACAAGGTGTCCAACTATCAAATACATCTCAAGCGAGCACCGCTTCACTTCCATCATCTCGTGTCGCTGCCATTAGTGATACTTTAAGTTCCACTGCGGGTGGTGTCGGTGATGAACAACTACAGTTACTTTATCAACAACTTGATGATAAAGATGATGAAATTAATAAACAAGCTCAAACAATTGCTCGTCTTCGACAACAAGTTGAAGAACAAGATGAAATCATCAATACTTTACGTAAAGAACGTGAAGGTCAACTGAAAGAGATCACAAACCTTCAAGCTGAATATCAATCAAGTAAAGAAGAGGTTAAAGAAGTTTTACAAGCTTTAGAAGAATTAGCTATGAATTATGATCAAAAAGCACAAGAGATTGCTTCAAAAGCAAAAGAATTAGAAGATGTCCAAGAATCTTTATTAAAACAAACTAGATTAATGCATAGTAAAGATGGTGAATTATCTCAATTAAAAGATACACATCAAAATCAAAAGAAGAAATATACTGAAATGATGTCAAGTTTATTAAAAGATTTAATTGATGTTGGTGAATGTTTAAATGATCAGTTGACGAAACCATCTGTTGGTGCTGAACGATTAGATGAAGAATTCACTGTAGTTCGTTTATATATAAGTAAAATGAAAACTGAAGCAAAATCATTTCAATCCCGTGTACGTCAATTAGAAAAAGAACGTGTTCAACATGTGCAATTAATGCGTAAAAGTGATGATGAATCAAAAGATCTACGGACAAGACTTCATGCTTTTGAAGTAAAAATTGCCACATTAACCGATAAAATTGATGAATCCGAATCACGTTAACGCCATTTTCAAGAAACTGTAGATAATATGAATGCAGAAATAGCAAAACTTCGTGCCAATGAACAATTTATGTCTGGTTCAGGTGAACAAAATGAAAAAATTCTATTTGGGCAATCAGCTATACGAGCTTAATTAGATGAAGAATTTTAACGTCAATCAGAACATTATGCTGCCCAAGTGAAAAGTTTTCGTGATG]
[+] EMBL CD166295 [TTGTTGGCGCGCTTTTCTCCTGCGATCGTTCGGCGGATCTAGATTTCCGGACAGGGTTTAATATGTCTGAGAGCATAAAGGTCATTTGCCGCGTAAGGCCGCTCAATGATCTAGAAAAGGCGAACGACAGCAAGTTTGTTGAATCGTTTCCTGGTGATGGCAAAACAGCAATATCAATTGGAGGAAAAAACTTTAACTTTGACCATGTAGTACAACCTAAAGCAACTCAGTTAGAAGTCTACGAAATTGTTGCCAAACCAATTGTTGCAGATGTTCTCAATGGATATAACGGCACAA ]
[+] EMBL CD194231 [ AAAAGGCGAACGACAGCAAGTTTGTTGTATCGTTTCCTGGTGATGGCAAAACAGCAATATCAATTGGAGGAAAAAACTTTAACTTTGACCATGTAGTACAACCTAAAGCAACTCAGTTAGAAGTCTACGAAATTGTTGCCAAACCAATTGTTGCAGATGTTCTCAATGGATATAACGGCACAATTTTCGCTTACGGTCAGACGTCGAGTGGGAAAACATTTACTATGGAGGGGATTTTAGGTGACCCAGTCT ]
[-] EMBL CD170803 [ ttTTGTATCGTTTCCTGGTGATGCCAAAACAGCAATATCAATTGGAGGAAAAAACTTTAACTTTGACCATGTAGTACAACCTAAAGCAACTCAGTTAGAAGTCTACGAAATTGTTGCCAAACCAATTGTTGCAGATGTTCTCAATGGATATAACGGCACAATTTTCGCTTACGGTCAGACGTCGAGTGGGAAAACATNTACTATGGAGGGGATTTTAGGTGACCCAGTCTTTCAGGGTGTTATTCCCCGGATAATACACGACATATTCAATCACATTTACCAAATGGATGAAAACCTTGAATTCCATATCAAAGTTTCATATTTTGAAATATATATGGATAAGATTCGCGATTTGCTTGATGTTCGAAGACAAATCTACCTGTCCATGAAGATAAAGATCGAGTGCCTTATGTTAAGGGAGCCACAGAACGGTTTGTGTCTAGTCCTGAGGAGGTATT ]
[+] EMBL CD153881 [ AAGACAAATCTACCTGTCCATGAAGATAAAGATCGAGTGCCTTATGTTAAGGGAGCCACAGAACGGTTTGTGTCTAGTCCTGAGGAGGTATTTGACGTCATTGATGAGGGGAAAGCCAATCGTCATGTAGCCGTAACAAACATGAACGAACATAGTTCTCGAAGTCATTCAGTATTCATGATTACTGTTCGACAAGAAAATTTAGAGACACAAAAAAAACTCCATGGAAAACTTTATCTTGTTGATCTGGCTGGTAGTGAGAAAGTTGCTAAAACAGGAGCTGAAGGCACTGTTTTGGATGAAGCTAAAAATATTAACAAATCATTGTCTGCCCTCGGTAATGTGATCAATGCACTTGTGGAAGGAAGCTCGCACGTTCCTTACCGTGACTCAAAGTTGACACGTATTCTTCAAGAATCTCTGGGTGGTAATGCACGAACAACAATGGTGATATGTTGTTCACCAGCTGCTTTTAACGATGCTGAGACANAATCAACTCTTATGTTTGGCATGCGCG CT ANACGATCAAG ACTTAGTCACTGT AATGAAG ACTAACT ]
[+] EMBL CD180788 [ CGAGTGCCTTATGTTAAGGGAGCCACAGAACGGTTTGTGTCTAGTCCTGAGGAGGTATTTGACGTCATTGATGAGGGGAAAGCCAATCGTCATGTAGCCGTAACAAACATGAACGAACATAGTTCTCGAAGTCATTCAGTATTCATGATTACTGTTCGACAAGAAAATTTAGAGACAC AAAAAAACTCCATGGAAAACTTTATCTT ]
[+] EMBL CD110809 [ CAATCGTCATGTAGCCGTAACAAACATGAACGAACATAGTTCTCGAAGTCATTCAGTATTCATGATTACTGTTCGACAAGAAAATTTAGAGACACAAAAAAAACTCCATGGAAAACTTTATCTTGTTGATCTGGCTGGTAGTGAGAAAGTTGCTAAAACAGGAGCTGAAGGCACTGTTTTGGATGAAGCTAAAAATATTAACAAATCATTGTCTGCCCTCGGTAATGTGATCAATGCACTTGTGGAAGGAAGCTCGCACGTTCCTTACCGTGACTCAAAGTTGACACGTATTCTTCAAGAATCTCTGGGTGGTAATGCACGAACAACAATGGTGATATGTTGTTCACCAGCTGCTTTTAACGATGCTGAGACAAAATCAACTCTTATGTTTGGCATGCGCGTCT AAACGATCAAGAACTTAGTCACTGTAAATGAAGAACTAACTGCCGATGAGTGGCGACGACGATACGAACGTGAAAAAGAGAAAAGTTA GAGACTTTCAAATATTGTATCTCACTTGGAAAGTGAACT ]
[-] EMBL CD193880 [ AAGAAAGTTTAGAGACACAAAAAAAACTCCATGGAAAACTTTATCTTGTTGATCTGGCTGGTAGTGAGAAAGTTGCTAAAACAGGAGCTGAAGGCACTGTTTTGGATGAAGCTAAAAATATTAACAAATCATTGTCTGCCCTCGGTAATGTGATCAATGCACTTGTGGAAGGAAGCTCGCACGTTCCTTACCGTGACTCA ]
[+] EMBL CD069161 [ gtgtgatgTTGGATGAAGCTAAAAATATTAACAAATCATTGTCTGCCCTCGGTAATGTGATCAATGCACTTGTGGAAGGAAGCTCGCACGTTCCTTACCGTGACTCAAAGTTGACACGTATTCTTCAAGAATCTCTGGGTGGTAATGCACGAACAACAATGGTGATATGTTGTTCACCAGCTGCTTTTAACGATGCTGAGACAAAATCAACTCTTATGTTTGGCATGCGCG CTAAAACGATC ]
[+] EMBL CD183953 [ TGTGACTAATGCACTTGTGGAAGGAAGCTCGCACGCTCCTTACCGTGACTCAAAGTTGACACGTATTCTTCAAGAATCTCTGGGTGGTAATGCACGAACAACAATGGTGATATGTTGTTCACCAGCTGCTTTTAACGATGCTGAGACAAAATCAACTCTTATGTTTGGCATGCGCG CTAAAAC ]
[+] EMBL CD184029 [ TGTGACTAATGCACTTGTGGAAGGAAGCTCGCACGCTCCTTACCGTGACTCAAAGTTGACACGTATTCTTCAAGAATCTCTGGGTGGTAATGCACGAACAACAATGGTGATATGTTGTTCACCAGCTGCTTTTAACGATGCTGAGACAAAATCAACTCTTATGTTTGGCATGCGCG CTAAAAC ]
[+] EMBL CD112475 [ TCGCACGTTCCTTACCGTGACTCAAAGTTGACACGTATTCTTCAAGAATCTCTGGGTGGTAATGCACGAACAACAATGGTGATATGTTGTTCACCAGCTGCTTTTAACGATGCTGAGACAAAATCAACTCTTATGTTTGGCATGCGCG CTAAAACGATCAAGAACTTAGTCACTGTAAATGAAGAACTAACTGCCGATGAGTGGCGACGACGATACGAACGTGAAAAAGAG AAAGTTAGGAGACTTCAAAATATTGTATCTCACTTGGAAAGTGAACTTAAACGTTGGCGAGGTGGTGAGTCCGTCAGTCAAGCTGAATGGTTTACAGGAACTCAATATTTAGCTGCCATAGATGATACAAAGGACATAACAACTCCAGATGTATTTCCAACTAAACTTATGTCAGATAGCATTTCAGCAACTACACC ACGAGGTGTCCAACTATCAA ]
[-] EMBL CD068332 [ aATGCGCG CTAAAACGATCAAGAACTTAGTCACTGTAAATGAAGAACTAACTGCCGATGAGTGGCGACGACGATACGAACGTGAAAAAGAG AAAGTTAGGAGACGTCCAGATATTGTATCTCACTTGGAAAGTGAACGTAAACCTTGGCGAGGTGGTGAGTCTGTCAGTCAAGCTGAATGGTTTACAGAAACTCAATATTGAGCTGCCATAGATGATACAAAGGACATAACAACTCCAGATGTATTTCCAACTAAACTTATGTCAGATAGCATTTCAGCAACTACACCAACAAGGTGTCCAACTATCAAATACATCTCAAGCGAGCACCGCTTCACTTCCATCATCTCGTGTCGCTGCCATTAGTGATACTTTAAGTGCCACTGCGGGca ]
[+] EMBL CD169031 [ CAAGGTGTCCAACTATCAAATACATCTCAAGCGAGCACCGCTTCACTTCCATCATCTCGTGTCGCTGCCATTAGTGATACTTTAAGTTCCACTGCGGGTGGTGTCGGTGATGAACAACTACAGTTGCTTTATCAACAACTTGATGATAAAGATGATGAAATTAATAAACAAGCTCAAACAATTGCTCGTCTTCGACAACAAGTTGAAGAACAAGATGAAATCATCAATACTTTACGTAAAGAACGTGAAGGTCAACTGAAAGAGATCACAAACCTTCAAGCTGAATATCAATCAAGTAAAGAAGAGGTTAAAGAAGTTTTACAAGCTTTAGAAGAATTAGCTATGAATTATGATCAAAAAGCACAAGAGATTGCTTCAAAAGCAAAAGAATTAGAAGATGTCCAAGAATCTTTATTAAAACAAACTAGATTAATGCATAGTAAAGATGGTGAATTATCTCAATTAAAAGATACACATCAAAATCAAAAGAAGAAATATACTGAAATGATGTCAAGTTTATTAAAAGATTTAATTGATGTTGGTGAATGTTTAAATGATCAGTTGACGAAACCATCTGTTGGTGCTGAACGATTAGATGAAGAATTCACTGTAGTTCGTTTATATATAAGTAAAATG ]
[+] EMBL CD192293 [ GTGTCCAACTATCAAATACATCTCAAGCGAGCACCGCTTCACTTCCATCATCTCGTGTCGCTGCCATTAGTGATACTTTAAGTTCCACTGCGGGTGGTGTCGGTGATGAACAACTACAGTTACTTTATCAACAACTTGATGATAAAGATGATGAAATTAATAAACAAGCTCAAACAATTGCTCGTCTTCGACAACAAGTTGAAGAACAAGATGAAATCATCAATACTTTACGTAAAGAACGTGAAGGTCAACTGAAAGAGATCACAAACCTTCAAGCTGAATATCAATCAAGTAAAGAAGAGGTTAAAGAAGTTTTACAAGCTTTAGAAGAATTAGCTATGAATTATGATCAAAAAGCACAAGAGATTGCTTCAAAAGCAAAAGAATTAGAAGATGTCCAAGAATCTTTATTAAAACAAACTAGATTAATGCATAGTAAAGATGGTGAATTATCTCAATTAAAAGATACACATCCAAATCAAAAGAAGAAAT ]
[+] EMBL CD192148 [ GTGTCCAACTATCAAATACATCTCAAGCGAGCACCGCTTCACTTCCATCATCTCGTGTCGCTGCCATTAGTGATACTTTAAGTTTCACTGCGGGTGGTGTCGGTGATGAACAACTACAGTTACTTTATCAACAACTTGATGATAAAGATGATGAAATTAATAAACAAGCTCAAACAATTGCTCGTCTTCGACAACAAGTTGAAGAACAAGATGAAATCATCAATACTTTACGTAAAGAACGTGAAGGTCAACTGAAAGAGATCACAAACCTTCAAGCTGAATATCAATCAAGTAAAGAAGAGGTTAAAGAAGTTTTACAAGCTTTAGAAGAATTAGCTATGAATTATGATCAAAAAGCACAAGAGATTGCTTCAAAAGCAAAAGAATTAGAAGATGTCCAAGAATCTTTATTAAAACAAACTAGATTAATGCATAGTAAAGATGGTGAATTATCTCAATTAAAAGATACACATCAAAATCAAAAGAAGAAAT ]
[+] EMBL CD192053 [ GTGTCCAACTATCAAATACATCTCAAGCGAGCACCGCTTCACTTCCATCATCTCGTGTCGCTGCCATTAGTGATACTTTAAGTTTCACTGCGGGTGGTGTCGGTGATGAACAACTACAGTTACTTTATCAACAACTTGATGATAAAGATGATGAAATTAATAAACAAGCTCAAACAATTGCTCGTCTTCGACAACAAGTTGAAGAACAAGATGAAATCATCAATACTTTACGTAAAGAACGTGAAGGTCAACTGAAAGAGATCACAAACCTTCAAGCTGAATATCAATCAAGTAAAGAAGAGGTTAAAGAAGTTTTACAAGCTTTAGAAGAATTAGCTATGAATTATGATCAAAAAGCACAAGAGATTGCTTCAAAAGCAAAAGAATTAGAAGATGTCCAAGAATCTTTATTAAAACAAACTAGATTAATGCATAGTAAAGATGGTGAATTATCTCAATTAAAAGATACACATCAAAATCAAAAGAAGAAAT ]
[+] EMBL CD192171 [ AACCTTCAAGCTGAATATCAATCAAGTAAAGAAGAGGTTAAAGAAGTTTTACAAGCTTTAGAAGAATTAGCTATGAATTATGATCAAAAAGCACAAGAGATTGCTTCAAAAGCAAAAGAATTAGAAGATGTCCAAGAATCTTTATTAAAACAAACTAGATTAATGCATAGTAAAGATGGTGAATTATCTCAATTAAAAGATACACATCAAAATCAAAAGAAGAAAT ]
[-] EMBL AI977407 [ ACGAAACCATCTGTTGGTGCTGAACGATTAGATGAAGAATTCACTGTAGTTCGTTTATATATAAGTAAAATGAAAACTGAAGCAAAATCATTTCAATCCCGTGTACGTCAATTAGAAAAAGAACGTGTTCAACATGTGCAATTAATGCGTAAAAGTGATGATGAATCAAAAGATCTACGGACAAGACTTCATGCTTTTGAAGTAAAAATTGCCACATTAACCGATAAAATTGATGAATCCGAATCACGTTAACGCCATTTTCAAGAAACTGTAGATAATATGAATGCAGAAATAGCAAAACTTCGTGCCAATGAACAATTTATGTCTGGTTCAGGTGAACAAAATGAAAAAATTCTATTTGGGCAATCAGCTATACGAGCTTAATTAGATGAAGAATTTTAACGTCAATCAGAACATTATGCTGCCCAAGTGAAAAGTTTTCGTGATG]
[+] EMBL CD195690 [ GAAGCAAAATCATTGCAATCCCGTGTACGTCAATTAGAAGAAGAACGTGTTCAACATGTACAATTAATGCGTAAAAGTGATGATGAATCAAAAGATCTACGTACAAGACTTCATGCTTTTGAAGTAAAAATTGCCACATTAACCGATAAAATTGATGAATCCGAATCACGTAAACGTCATTTACAAGAAACTGTAGATAATATGAATGCAGAAATAGCAAAACTTCGTGCCAATGAACAATTTATGTCTGGTTCAGGTGAACAAAATG AAAAATTCTATCTGGAC ATCAGCTATACGAGC TAATTAGATGAAGAATTTaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||